##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921449_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3107619 Sequences flagged as poor quality 0 Sequence length 101 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.03010118035705 33.0 31.0 34.0 30.0 34.0 2 32.14636414566908 34.0 31.0 34.0 30.0 34.0 3 32.26892099707204 34.0 31.0 34.0 30.0 34.0 4 35.79451213292234 37.0 35.0 37.0 35.0 37.0 5 35.611378357514226 37.0 35.0 37.0 35.0 37.0 6 35.64641128787023 37.0 35.0 37.0 35.0 37.0 7 35.585215562139375 37.0 35.0 37.0 35.0 37.0 8 35.54038059363133 37.0 35.0 37.0 33.0 37.0 9 37.18337930100183 39.0 37.0 39.0 34.0 39.0 10-11 37.101217523769805 39.0 37.0 39.0 34.0 39.0 12-13 36.996088806253276 39.0 37.0 39.0 33.0 39.0 14-15 38.31994623536541 40.0 38.0 41.0 34.0 41.0 16-17 38.230109611249 40.0 38.0 41.0 33.5 41.0 18-19 38.13947848819305 40.0 38.0 41.0 33.5 41.0 20-21 38.03750266683271 40.0 38.0 41.0 33.0 41.0 22-23 38.004938668478985 40.0 38.0 41.0 33.5 41.0 24-25 38.05631111793305 40.0 38.0 41.0 33.0 41.0 26-27 37.956295961634936 40.0 38.0 41.0 33.0 41.0 28-29 37.834102571776015 40.0 38.0 41.0 33.0 41.0 30-31 37.699547627942806 40.0 38.0 41.0 33.0 41.0 32-33 37.53914154212598 40.0 38.0 41.0 32.5 41.0 34-35 37.40481796513666 40.0 37.0 41.0 32.0 41.0 36-37 37.319777134841814 40.0 37.0 41.0 32.0 41.0 38-39 37.29991997088446 40.0 37.0 41.0 32.0 41.0 40-41 37.148770650456186 40.0 37.0 41.0 31.5 41.0 42-43 36.924814303169086 40.0 37.0 41.0 31.0 41.0 44-45 36.73569330731985 40.0 36.0 41.0 31.0 41.0 46-47 36.47195746968982 39.0 36.0 41.0 30.0 41.0 48-49 36.15862417497125 39.0 35.0 40.5 30.0 41.0 50-51 35.90040075697825 39.0 35.0 40.0 29.0 41.0 52-53 35.61286438266724 38.5 35.0 40.0 28.0 41.0 54-55 35.30815811075939 38.0 35.0 40.0 28.0 41.0 56-57 34.94803674453014 38.0 34.0 40.0 27.0 41.0 58-59 34.58039917377259 37.5 34.0 40.0 26.5 41.0 60-61 34.17579230272437 37.0 33.5 39.5 26.0 41.0 62-63 33.76649148431645 36.0 33.0 39.0 26.0 40.5 64-65 33.27988292644626 36.0 33.0 39.0 24.5 40.0 66-67 32.77410181235216 35.0 32.0 38.0 23.0 40.0 68-69 32.29687358714179 35.0 31.5 37.5 22.0 40.0 70-71 31.7709744984826 35.0 31.0 37.0 20.5 39.0 72-73 31.2585281529042 34.5 31.0 36.0 19.5 39.0 74-75 30.76742982328271 34.0 30.0 36.0 18.0 38.5 76-77 29.402602281682533 32.5 28.5 34.5 18.0 36.0 78-79 30.357862080261448 34.0 30.0 35.0 18.0 37.0 80-81 30.413940061506896 34.0 31.0 35.0 18.0 36.5 82-83 30.113924197271288 34.0 30.0 35.0 16.0 36.0 84-85 29.675656668336757 34.0 30.0 35.0 9.0 36.0 86-87 29.21473723130152 34.0 29.0 35.0 6.0 35.0 88-89 28.714241353267568 33.5 29.0 35.0 2.0 35.0 90-91 28.302083363501126 33.0 28.5 35.0 2.0 35.0 92-93 27.92492322900587 33.0 27.0 35.0 2.0 35.0 94-95 27.50320212999084 33.0 27.0 35.0 2.0 35.0 96-97 26.82657140402347 33.0 25.5 34.0 2.0 35.0 98-99 25.915027710925955 32.0 24.5 34.0 2.0 35.0 100-101 22.31641539712558 28.5 10.0 32.5 2.0 34.5 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 18199.0 3 9645.0 4 5767.0 5 4202.0 6 3712.0 7 3929.0 8 4539.0 9 5274.0 10 6276.0 11 7292.0 12 8702.0 13 10319.0 14 11464.0 15 12931.0 16 14871.0 17 17774.0 18 17662.0 19 15102.0 20 14708.0 21 15366.0 22 16612.0 23 18700.0 24 21450.0 25 25320.0 26 30400.0 27 37099.0 28 45014.0 29 55664.0 30 68716.0 31 86738.0 32 113278.0 33 154080.0 34 224811.0 35 354109.0 36 569805.0 37 738382.0 38 329924.0 39 9783.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.53389026734253 17.96886954534273 14.262927603098325 24.234312584216415 2 16.217528596652294 19.463261101183896 38.06065029207248 26.258560010091326 3 19.87179652211299 22.669759065766794 28.363643736057494 29.09480067606272 4 14.355529467751923 15.77827713812215 34.70371578404064 35.16247761008529 5 15.825228190932217 35.51354021357352 32.79349464779033 15.86773694770393 6 34.602601132803315 33.418953686440815 16.72301703069002 15.25542815006585 7 30.67658582047495 30.543842372146674 19.676044155069594 19.103527652308777 8 27.780691265378486 32.834171301044734 19.399220960617665 19.98591647295911 9 26.856496833032445 16.372183508578107 19.425935797442914 37.34538386094653 10-11 26.3975732470946 24.958738114257738 26.261161001881106 22.382527636766564 12-13 26.721779900521103 22.221297065172788 26.68024446478716 24.37667856951895 14-15 23.973088725192106 23.805404441129934 24.479168427633404 27.742338406044553 16-17 24.169110231295505 26.680796366538235 25.12964117665805 24.02045222550821 18-19 24.09748413905353 26.07646476339601 26.537822900798748 23.28822819675171 20-21 24.79351811274131 25.143015231836362 26.446564166180764 23.61690248924157 22-23 24.668028419754755 24.772349007980583 26.33207137775288 24.227551194511783 24-25 24.476081612261606 25.001360032679415 26.324470641481547 24.19808771357744 26-27 24.326713928815813 25.21970269005441 26.39874589867927 24.054837482450502 28-29 24.34201304426963 25.364453069742122 26.275543499164677 24.017990386823573 30-31 24.586960963985693 25.119621305126444 26.062158991991996 24.23125873889587 32-33 24.45807227376415 25.16226737144638 25.991758190039192 24.387902164750276 34-35 24.697179511026853 25.13888759268693 26.036077466177982 24.127855430108237 36-37 24.6264994170163 25.079627238002494 26.07789228623904 24.215981058742166 38-39 24.548813378219197 25.217322038916816 26.051288323023748 24.18257625984024 40-41 24.75192411489749 25.119270501925804 25.91517962750719 24.21362575566951 42-43 24.68274153533612 25.152134908801116 25.750924008088116 24.414199547774647 44-45 24.6329744796697 25.08875328309103 25.76336191096254 24.51491032627673 46-47 24.74954166591565 25.090411547958997 25.800072998715116 24.359973787410233 48-49 24.74029296485323 25.177922086280468 25.603950391628103 24.4778345572382 50-51 24.602496631859193 25.38935353740467 25.59066159730568 24.41748823343046 52-53 24.804101885522872 25.319942919599107 25.420617197522226 24.45533799735579 54-55 24.718444867969367 25.164910575724836 25.525922219263446 24.59072233704235 56-57 24.76221813357747 25.26013890486714 25.506814512203853 24.470828449351533 58-59 24.852763527702855 25.203373293611183 25.490654160496284 24.453209018189682 60-61 24.836667245917887 25.183896172436654 25.644626157697925 24.334810423947534 62-63 24.666096590291023 25.274524923837838 25.526907626386063 24.532470859485077 64-65 24.709349755054742 25.236248358369572 25.502079049915544 24.552322836660146 66-67 24.750742011704794 25.226257235016515 25.405981805422318 24.617018947856376 68-69 24.650106892217643 25.22817330787261 25.468167627990933 24.653552171918815 70-71 24.725440590412553 25.09861610793592 25.535304357452937 24.640638944198585 72-73 24.871094925026068 25.113108298610737 25.402343008771677 24.613453767591515 74-75 24.641042572639034 25.387112529294026 25.305770202211264 24.666074695855677 76-77 24.749580906610323 25.159999502914165 25.347826936016176 24.742592654459337 78-79 24.705637042386304 25.135900389896975 25.487169950157917 24.67129261755881 80-81 24.725351838385944 25.23544145050668 25.446394801280235 24.59281190982714 82-83 24.783066950583667 25.153611790226943 25.41914424806548 24.64417701112391 84-85 24.782876320488054 25.273551938861473 25.26061358993319 24.682958150717283 86-87 24.709178980535683 25.209503573747092 25.409752616479025 24.671564829238196 88-89 24.612869499835078 25.13772503717019 25.355610049725797 24.893795413268936 90-91 24.722955986799327 25.151281884389064 25.34785166835402 24.77791046045759 92-93 24.793082716207373 25.243224492194074 25.347807925128755 24.6158848664698 94-95 24.76689260293123 25.159845991749926 25.31338439050952 24.759877014809327 96-97 24.701872427642527 25.111438319013118 25.425764935180496 24.760924318163863 98-99 24.678868081189716 25.192161014903665 25.2882576135475 24.840713290359123 100-101 25.127848163591587 24.711470726141528 25.397012354713606 24.76366875555328 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 713.0 1 569.5 2 668.0 3 890.5 4 723.5 5 654.5 6 1194.5 7 2573.0 8 3610.0 9 3324.5 10 2265.0 11 1354.5 12 1090.0 13 1041.5 14 1053.5 15 1113.0 16 1162.5 17 1279.0 18 1387.5 19 1413.5 20 1447.5 21 1549.0 22 1655.5 23 1797.5 24 1990.5 25 2279.0 26 2773.0 27 3518.0 28 4599.0 29 6146.0 30 8493.0 31 11413.0 32 15337.5 33 20003.0 34 24836.5 35 30442.0 36 37341.0 37 44820.0 38 52406.5 39 59651.0 40 67464.0 41 76427.5 42 85283.5 43 94041.5 44 102894.5 45 112057.0 46 120727.0 47 129765.0 48 140051.5 49 144587.5 50 142134.5 51 141149.5 52 141276.5 53 141391.0 54 139974.0 55 134709.0 56 126605.5 57 116194.0 58 106655.0 59 96474.0 60 83566.5 61 71030.0 62 58523.0 63 44453.5 64 32504.0 65 24554.0 66 18510.0 67 14083.0 68 10855.0 69 8129.0 70 6030.0 71 4466.0 72 3241.5 73 2371.5 74 1776.0 75 1311.0 76 916.5 77 556.0 78 315.0 79 168.0 80 82.0 81 36.0 82 20.0 83 16.0 84 8.5 85 5.0 86 2.5 87 1.5 88 1.0 89 0.0 90 0.0 91 0.0 92 0.5 93 1.0 94 0.5 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.3200199252224935 2 0.0 3 0.006918480032462152 4 0.06011032884018279 5 7.722954454841471E-4 6 0.06593472365820906 7 0.07661814398740643 8 0.1056435811468523 9 0.09376953867253353 10-11 0.09843549032233359 12-13 0.09785626873822048 14-15 0.06694836143040701 16-17 0.037327613198400444 18-19 0.040127184188280485 20-21 0.02797962041035275 22-23 0.042765860293684656 24-25 0.034624579139205934 26-27 0.02230003098835475 28-29 0.02373199546018994 30-31 0.003346613597097971 32-33 0.005486515560626962 34-35 0.008044744223793199 36-37 0.010554704421616677 38-39 0.015413729932787772 40-41 0.019500459998474717 42-43 0.0031374502472793476 44-45 0.013193380527020846 46-47 0.023007968480048553 48-49 0.002542139174718651 50-51 0.006194453052320764 52-53 0.0023329758249000278 54-55 0.003266166154860039 56-57 0.0031052712703841753 58-59 0.0010619062375407024 60-61 0.0051164573263324745 62-63 0.013933496995609824 64-65 0.006114005610082832 66-67 0.03858259329731219 68-69 0.061799725127179364 70-71 0.01184186349742359 72-73 0.031294055030555545 74-75 0.05180815280122821 76-77 0.30771146656008985 78-79 0.07438170509319193 80-81 0.03243640871033418 82-83 0.027110788034183084 84-85 0.018551180180067118 86-87 0.12015629972657524 88-89 0.539593174066705 90-91 0.13325314332291058 92-93 0.04783404915467437 94-95 0.008141281154478718 96-97 0.005872663283369036 98-99 0.01058688339851185 100-101 0.007143732870728362 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3107619.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.86040102044223 #Duplication Level Percentage of deduplicated Percentage of total 1 72.54848558682743 40.52587498305954 2 15.414978892356443 17.221738052973663 3 5.376082382724112 9.009303534537105 4 2.237498501911955 4.999502543977622 5 1.2287736861949052 3.431989543710722 6 0.7071049025902786 2.3699498053328223 7 0.4767320714636294 1.8641311283885125 8 0.3430952911540926 1.5332352441674397 9 0.2546402467460256 1.2801875669259615 >10 1.331852697957871 13.195451009217562 >50 0.06457142144591417 2.421578547433734 >100 0.015146443172611436 1.3222508350945241 >500 6.342572228916452E-4 0.22626798748193888 >1k 3.459584845143432E-4 0.41211372170576255 >5k 5.76597474190572E-5 0.18642549599319685 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5788 0.18625191826926016 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3768 0.1212503849410111 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3580 0.11520073728471864 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 1.287159075806912E-4 0.0 0.0 0.0 6 0.0 1.287159075806912E-4 0.0 0.0 0.0 7 0.0 1.60894884475864E-4 0.0 6.43579537903456E-5 0.0 8 0.0 1.60894884475864E-4 0.0 6.43579537903456E-5 0.0 9 0.0 1.60894884475864E-4 0.0 6.43579537903456E-5 0.0 10-11 0.0 1.60894884475864E-4 0.0 9.65369306855184E-5 0.0 12-13 0.0 1.60894884475864E-4 0.0 1.287159075806912E-4 1.60894884475864E-4 14-15 0.0 2.0916334981862318E-4 0.0 1.287159075806912E-4 1.930738613710368E-4 16-17 0.0 2.252528382662096E-4 0.0 1.769843729234504E-4 2.252528382662096E-4 18-19 0.0 2.252528382662096E-4 0.0 2.252528382662096E-4 3.057002805041416E-4 20-21 0.0 2.574318151613824E-4 0.0 2.896107920565552E-4 3.378792573993144E-4 22-23 0.0 2.574318151613824E-4 0.0 3.8614772274207364E-4 3.7005823429448717E-4 24-25 0.0 2.735213036089688E-4 0.0 5.631320956655239E-4 3.861477227420736E-4 26-27 0.0 2.896107920565552E-4 0.0 8.366533992744927E-4 3.861477227420736E-4 28-29 1.60894884475864E-5 2.896107920565552E-4 0.0 0.0017537542407869175 3.861477227420736E-4 30-31 3.21789768951728E-5 3.21789768951728E-4 0.0 0.005100367837884889 4.0223721118966E-4 32-33 3.21789768951728E-5 3.21789768951728E-4 0.0 0.012356727127746355 4.183266996372464E-4 34-35 3.21789768951728E-5 3.21789768951728E-4 0.0 0.022444836384383028 5.470426072179376E-4 36-37 3.21789768951728E-5 3.21789768951728E-4 0.0 0.03571866435364181 5.470426072179376E-4 38-39 3.21789768951728E-5 3.21789768951728E-4 0.0 0.055991419797600674 5.470426072179376E-4 40-41 3.21789768951728E-5 3.21789768951728E-4 0.0 0.07850061413577404 5.470426072179376E-4 42-43 3.21789768951728E-5 3.539687458469008E-4 0.0 0.10189473033856467 5.470426072179376E-4 44-45 3.21789768951728E-5 3.539687458469008E-4 0.0 0.12680125845542842 5.470426072179376E-4 46-47 3.21789768951728E-5 3.539687458469008E-4 0.0 0.15407294137408736 5.792215841131104E-4 48-49 3.21789768951728E-5 3.539687458469008E-4 0.0 0.18005746521693938 6.114005610082832E-4 50-51 3.21789768951728E-5 3.539687458469008E-4 0.0 0.20658903166700937 6.43579537903456E-4 52-53 3.21789768951728E-5 3.7005823429448717E-4 0.0 0.23160818620300622 6.596690263510423E-4 54-55 3.21789768951728E-5 4.6659516498000556E-4 0.0 0.2592338378675121 6.757585147986288E-4 56-57 3.21789768951728E-5 5.148636303227647E-4 0.0 0.28729390572010277 6.757585147986288E-4 58-59 3.21789768951728E-5 5.470426072179376E-4 0.0 0.31709163832503273 6.757585147986288E-4 60-61 3.21789768951728E-5 5.470426072179376E-4 0.0 0.34600444906534555 6.918480032462153E-4 62-63 3.21789768951728E-5 5.470426072179376E-4 0.0 0.3761078819507797 7.722954454841472E-4 64-65 3.21789768951728E-5 5.470426072179376E-4 0.0 0.4067905364203269 7.722954454841472E-4 66-67 3.21789768951728E-5 6.114005610082832E-4 0.0 0.43892124485015693 7.883849339317336E-4 68-69 3.21789768951728E-5 6.114005610082832E-4 0.0 0.4723712913326891 8.0447442237932E-4 70-71 3.21789768951728E-5 6.596690263510424E-4 0.0 0.5082347610823592 8.0447442237932E-4 72-73 3.21789768951728E-5 7.079374916938016E-4 0.0 0.5420709552876334 0.0010297272606455295 74-75 3.21789768951728E-5 7.079374916938016E-4 0.0 0.5780631409448842 0.0011262641913310479 76-77 3.21789768951728E-5 7.079374916938016E-4 0.0 0.6158895282851597 0.0011745326566738072 78-79 3.21789768951728E-5 7.079374916938016E-4 0.0 0.6562097863348113 0.0012228011220165665 80-81 3.21789768951728E-5 7.401164685889743E-4 0.0 0.6952267958202083 0.0012549800989117392 82-83 3.21789768951728E-5 7.401164685889743E-4 0.0 0.7365285126651626 0.001287159075806912 84-85 3.21789768951728E-5 7.401164685889743E-4 0.0 0.7781681087675162 0.0013032485642544985 86-87 3.21789768951728E-5 7.401164685889743E-4 0.0 0.8216901750182375 0.0013836960064924305 88-89 3.21789768951728E-5 7.401164685889743E-4 0.0 0.8678509173743628 0.0014802329371779487 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 9520 0.0 29.2221 1 TCAACGC 11335 0.0 24.307278 4 TATCAAC 11570 0.0 23.894915 2 CAACGCA 11590 0.0 23.676764 5 ATCAACG 11735 0.0 23.478361 3 GTACATG 9215 0.0 23.158915 1 GGTATCA 6640 0.0 23.028862 1 AACGCAG 12220 0.0 22.456474 6 TACATGG 9740 0.0 21.166384 2 ACGCAGA 13880 0.0 19.737507 7 ACATGGG 10325 0.0 19.139303 3 CGCAGAG 14495 0.0 18.736294 8 AGAGTAC 10890 0.0 18.180407 10-11 GAGTACA 7910 0.0 17.705425 1 GTACCTG 3030 0.0 17.45082 1 AGTACTT 6115 0.0 17.349863 12-13 GAGTACT 5705 0.0 17.223827 12-13 CATGGGG 7750 0.0 17.101429 4 AGTACAT 7465 0.0 16.990154 2 GCAGAGT 15705 0.0 16.838995 9 >>END_MODULE