##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921447_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2695280 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.97205744857677 33.0 31.0 34.0 30.0 34.0 2 32.086369505209106 34.0 31.0 34.0 30.0 34.0 3 32.20836833278917 34.0 31.0 34.0 30.0 34.0 4 35.7531410465703 37.0 35.0 37.0 35.0 37.0 5 35.563472440711166 37.0 35.0 37.0 33.0 37.0 6 35.59950468967973 37.0 35.0 37.0 33.0 37.0 7 35.53038719539343 37.0 35.0 37.0 33.0 37.0 8 35.48676538244635 37.0 35.0 37.0 33.0 37.0 9 37.11429721587368 39.0 37.0 39.0 34.0 39.0 10-11 37.02753461606957 39.0 37.0 39.0 33.5 39.0 12-13 36.922738082870794 39.0 37.0 39.0 33.0 39.0 14-15 38.242645105517795 40.0 38.0 41.0 33.0 41.0 16-17 38.15013801905553 40.0 38.0 41.0 33.0 41.0 18-19 38.045791346353624 40.0 38.0 41.0 33.0 41.0 20-21 37.93547367991452 40.0 38.0 41.0 33.0 41.0 22-23 37.90759364518714 40.0 38.0 41.0 33.0 41.0 24-25 37.97166880620937 40.0 38.0 41.0 33.0 41.0 26-27 37.87505824997774 40.0 38.0 41.0 33.0 41.0 28-29 37.748512028434895 40.0 38.0 41.0 33.0 41.0 30-31 37.61102501409872 40.0 38.0 41.0 32.5 41.0 32-33 37.46149787777151 40.0 37.0 41.0 32.0 41.0 34-35 37.33688151138286 40.0 37.0 41.0 32.0 41.0 36-37 37.25884008340506 40.0 37.0 41.0 31.5 41.0 38-39 37.23891970407527 40.0 37.0 41.0 32.0 41.0 40-41 37.08708891098513 40.0 37.0 41.0 31.0 41.0 42-43 36.870071013030184 40.0 36.5 41.0 31.0 41.0 44-45 36.687213944376836 39.5 36.0 41.0 30.5 41.0 46-47 36.44243418123534 39.0 36.0 41.0 30.0 41.0 48-49 36.14284582677867 39.0 35.0 40.0 29.5 41.0 50-51 35.887160703155146 39.0 35.0 40.0 29.0 41.0 52-53 35.596774361105346 38.5 35.0 40.0 28.0 41.0 54-55 35.29548636876317 38.0 34.5 40.0 28.0 41.0 56-57 34.94556558131252 38.0 34.0 40.0 27.0 41.0 58-59 34.581809867620436 37.5 34.0 40.0 26.0 41.0 60-61 34.175254890029976 37.0 33.5 39.5 26.0 41.0 62-63 33.75138668338725 36.0 33.0 39.0 25.5 40.5 64-65 33.2595372280431 36.0 32.5 39.0 24.5 40.0 66-67 32.75588992609302 35.0 32.0 38.5 22.5 40.0 68-69 32.27345860170372 35.0 31.0 38.0 22.0 40.0 70-71 31.743437602030216 35.0 31.0 37.0 20.5 39.0 72-73 31.20798024695022 34.0 30.5 36.5 19.5 39.0 74-75 30.700847036300495 34.0 30.0 36.0 18.0 38.5 76-77 29.35496479030008 32.5 28.5 34.5 17.0 36.0 78-79 30.30131025348016 34.0 30.0 35.0 18.0 37.0 80-81 30.3480115238491 34.0 30.0 35.0 18.0 37.0 82-83 30.03115984239114 34.0 30.0 35.0 15.0 36.0 84-85 29.57096776587219 34.0 29.5 35.0 8.5 36.0 86-87 29.082562479593957 34.0 29.0 35.0 4.5 35.0 88-89 28.567711146893828 33.5 29.0 35.0 2.0 35.0 90-91 28.140847147606188 33.0 27.5 35.0 2.0 35.0 92-93 27.745850709388264 33.0 27.0 35.0 2.0 35.0 94-95 27.293640363895403 33.0 26.5 34.0 2.0 35.0 96-97 26.582271044195778 32.5 25.0 34.0 2.0 35.0 98-99 25.627623104093082 32.0 23.5 34.0 2.0 35.0 100-101 22.024131073580484 28.0 2.0 32.5 2.0 34.5 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 15717.0 3 8349.0 4 4818.0 5 3679.0 6 3296.0 7 3276.0 8 3754.0 9 4477.0 10 5366.0 11 6291.0 12 7611.0 13 8836.0 14 9745.0 15 10858.0 16 12511.0 17 14423.0 18 15033.0 19 13510.0 20 13409.0 21 14250.0 22 15229.0 23 16925.0 24 19752.0 25 23344.0 26 28646.0 27 34225.0 28 41849.0 29 51419.0 30 62969.0 31 79568.0 32 103275.0 33 138790.0 34 198177.0 35 306009.0 36 482835.0 37 621766.0 38 282463.0 39 8830.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.746443258315935 17.808366014726072 13.634998375390195 24.810192351567796 2 16.239759876524886 19.084547802083645 38.343177703244194 26.33251461814728 3 19.82427368186709 22.166004971986197 28.474305220585507 29.535416125561202 4 14.091659510929993 15.220019876427573 34.68655645904079 36.00176415360165 5 15.558024906641831 35.589413285892114 33.13340246691884 15.71915934054722 6 35.149324075734405 33.400159119622245 16.440665569981263 15.009851234662088 7 31.096498474893764 30.5191301974748 19.37959829277213 19.00477303485931 8 27.798830435420463 33.861995836513515 18.963288151519713 19.375885576546313 9 26.800821611456215 16.320782008922453 19.083452387274455 37.79494399234688 10-11 26.39685839977524 25.029018912847818 26.41076668051305 22.163356006863893 12-13 26.545149408033236 22.064310361827722 26.892461831192865 24.49807839894618 14-15 23.717101477254587 23.78825398829037 24.352591971071206 28.142052563383835 16-17 24.13837898185862 26.911102846695336 25.036874388055892 23.913643783390157 18-19 24.186065242461012 26.184356403525015 26.43747167554924 23.192106678464732 20-21 24.622114562606313 25.390271777644873 26.328386281613238 23.65922737813558 22-23 24.516881808595258 25.03859340718077 26.229449173067348 24.21507561115662 24-25 24.221943488268213 25.263707001993634 26.325568310139218 24.188781199598935 26-27 24.178672062956384 25.450376314018936 26.283440290556502 24.087511332468175 28-29 24.24401832462433 25.54557210269108 26.245261168945373 23.96514840373922 30-31 24.444738383347985 25.41335158310526 26.038093368806358 24.1038166647404 32-33 24.24146796983515 25.447720670314368 26.017193646228087 24.2936177136224 34-35 24.375767142053558 25.428616272390904 26.14674286511509 24.04887372044045 36-37 24.365800176290044 25.458494195063025 26.05359833364904 24.122107294997885 38-39 24.389194464570487 25.504407062060675 26.05837675765287 24.04802171571597 40-41 24.516329425176625 25.391452722486235 26.01779192238411 24.074425929953026 42-43 24.457637048423546 25.362153490078832 25.904729784130808 24.275479677366814 44-45 24.36283991194503 25.411317457092686 25.942337538486942 24.283505092475345 46-47 24.380295023916094 25.432684796311477 25.973018920229833 24.214001259542595 48-49 24.41351918173276 25.449932890139255 25.84895597092246 24.28759195720552 50-51 24.39176064843244 25.688681188001254 25.69567532368749 24.22388283987882 52-53 24.464706199907948 25.630322954424408 25.67532846509504 24.229642380572606 54-55 24.454697325129793 25.39806747422016 25.75236695913349 24.39486824151656 56-57 24.404369782258513 25.541153569236176 25.762139721797134 24.292336926708177 58-59 24.412583083557816 25.522812603712413 25.7773897705726 24.287214542157166 60-61 24.575226305414077 25.462526821416766 25.741250643287312 24.220996229881848 62-63 24.39680602148479 25.57119816125632 25.744860584882428 24.287135232376464 64-65 24.457784698977886 25.40120017765568 25.751038643820767 24.389976479545663 66-67 24.415529174918863 25.55947297782819 25.659594273989768 24.36540357326318 68-69 24.409899725646994 25.533262053526677 25.681873025419417 24.374965195406908 70-71 24.37714302041177 25.39675736811258 25.76131087124187 24.464788740233782 72-73 24.55587613744922 25.387859142237655 25.56687819133419 24.48938652897893 74-75 24.3599190460741 25.595646870422488 25.51785938338707 24.52657470011634 76-77 24.452110057327108 25.403530135063317 25.632127742240897 24.512232065368682 78-79 24.359914009156018 25.406470105557844 25.73478359342222 24.498832291863913 80-81 24.369978070944587 25.559254007568743 25.57679057130413 24.49397735018254 82-83 24.493298128397072 25.494890812183375 25.541522693285252 24.47028836613431 84-85 24.47088349333881 25.470066534891995 25.524579910244043 24.534470061525155 86-87 24.444761420277082 25.400072099620058 25.680818585135036 24.474347894967828 88-89 24.378797717760683 25.27508801585647 25.631310258551594 24.714804007831255 90-91 24.379285088148663 25.427312997912637 25.636346445307556 24.557055468631145 92-93 24.42189360028597 25.515634494439706 25.69434571722239 24.368126188051942 94-95 24.43243156999731 25.410828618090463 25.552587380334806 24.60415243157742 96-97 24.41935147541884 25.40305061011831 25.600944368979196 24.576653545483655 98-99 24.444159141756742 25.38059924819856 25.596202736667085 24.579038873377616 100-101 24.84445765367042 24.982542301062008 25.683911385388075 24.4890886598795 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 322.0 1 266.0 2 387.5 3 531.0 4 396.5 5 368.5 6 666.0 7 1451.0 8 2130.5 9 2030.0 10 1416.0 11 877.0 12 756.0 13 764.0 14 772.5 15 813.0 16 872.0 17 963.0 18 1010.0 19 1053.0 20 1128.0 21 1157.0 22 1216.0 23 1363.5 24 1506.5 25 1700.5 26 2116.5 27 2750.5 28 3592.0 29 4961.5 30 7075.0 31 9807.0 32 13441.0 33 17900.0 34 22937.5 35 28654.0 36 35089.0 37 42000.0 38 49102.5 39 56345.5 40 64306.5 41 71967.5 42 79674.0 43 88433.0 44 96037.0 45 103586.5 46 110415.5 47 116163.0 48 123035.5 49 126494.5 50 125406.0 51 123992.0 52 123192.0 53 121882.5 54 119173.5 55 113542.5 56 105120.5 57 95529.5 58 87024.5 59 78130.0 60 66900.5 61 56014.5 62 45441.5 63 34488.0 64 25263.0 65 18802.5 66 13968.0 67 10597.5 68 8073.5 69 6001.5 70 4432.0 71 3217.0 72 2296.0 73 1701.5 74 1279.5 75 891.5 76 579.5 77 320.0 78 179.0 79 97.0 80 53.5 81 20.0 82 11.0 83 10.0 84 4.5 85 1.0 86 1.0 87 0.5 88 0.5 89 0.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.3146611854798017 2 0.0 3 0.006678341396812205 4 0.06073580481434211 5 5.565284497343504E-4 6 0.063407141373067 7 0.07513134071413731 8 0.10481285803330266 9 0.09360808524531775 10-11 0.09793045620492119 12-13 0.09659478792555876 14-15 0.06567035706865336 16-17 0.03702769285565878 18-19 0.0390682971713514 20-21 0.028920928437861745 22-23 0.04329791338933246 24-25 0.035413760351429166 26-27 0.021853017126235493 28-29 0.02428319135674216 30-31 0.003209314060134754 32-33 0.005806446825561723 34-35 0.00786560208957882 36-37 0.010740999079872963 38-39 0.016974117716897687 40-41 0.021296488676501146 42-43 0.0030794574218634056 44-45 0.01382045650173637 46-47 0.02415333471847081 48-49 0.0026898875070493606 50-51 0.006121812947077855 52-53 0.0020220533673681396 54-55 0.0038029444065180613 56-57 0.003283517853432667 58-59 9.832002611973524E-4 60-61 0.00515716363420498 62-63 0.01471090202131133 64-65 0.006641239500163248 66-67 0.038882787688106615 68-69 0.061960167403757684 70-71 0.012596093912320798 72-73 0.03242705767118815 74-75 0.052016859101837294 76-77 0.305868035973999 78-79 0.07309073639844468 80-81 0.033744175002226116 82-83 0.028624113264670088 84-85 0.019608352378973615 86-87 0.11766866522216615 88-89 0.5279228874180049 90-91 0.13377088836781337 92-93 0.04708230684752605 94-95 0.00773574545130747 96-97 0.005453978807396634 98-99 0.010629693389926092 100-101 0.007197767949897599 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2695280.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.873840275309995 #Duplication Level Percentage of deduplicated Percentage of total 1 75.24396149207708 44.29900970566122 2 14.35046580493416 16.897340633519832 3 4.553090924380617 8.041738435228437 4 1.971991458949605 4.643948407138984 5 1.0678141069963878 3.143315858951406 6 0.6474134096108106 2.2869428201712427 7 0.4145929919635367 1.7086077111686901 8 0.2901794578493607 1.366718324207945 9 0.22293369228110188 1.1812466332208431 >10 1.159956671897719 12.06242813236054 >50 0.059723633564628294 2.3665297272986514 >100 0.017371983734451178 1.5745756556176993 >500 3.152323502706265E-4 0.1259780781987044 >1k 1.891394101541087E-4 0.30161987725585115 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3545 0.13152622362055147 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 7.420379329791338E-5 7.420379329791338E-5 0.0 0.0 0.0 6 1.1130568994687008E-4 7.420379329791338E-5 0.0 0.0 0.0 7 1.1130568994687008E-4 7.420379329791338E-5 0.0 0.0 0.0 8 1.1130568994687008E-4 7.420379329791338E-5 0.0 0.0 0.0 9 1.1130568994687008E-4 7.420379329791338E-5 0.0 0.0 7.420379329791338E-5 10-11 1.1130568994687008E-4 7.420379329791338E-5 0.0 0.0 7.420379329791338E-5 12-13 1.1130568994687008E-4 1.1130568994687008E-4 0.0 0.0 7.420379329791338E-5 14-15 1.1130568994687008E-4 1.4840758659582677E-4 0.0 3.710189664895669E-5 1.2985663827134842E-4 16-17 1.1130568994687008E-4 1.4840758659582677E-4 0.0 5.565284497343504E-5 2.2261137989374016E-4 18-19 1.1130568994687008E-4 2.0406043156926182E-4 0.0 7.420379329791338E-5 2.411623282182185E-4 20-21 1.1130568994687008E-4 2.2261137989374016E-4 0.0 1.8550948324478348E-4 2.5971327654269685E-4 22-23 1.1130568994687008E-4 2.2261137989374016E-4 0.0 2.782642248671752E-4 2.5971327654269685E-4 24-25 1.1130568994687008E-4 2.2261137989374016E-4 0.0 4.4522275978748033E-4 2.5971327654269685E-4 26-27 1.2985663827134842E-4 2.2261137989374016E-4 0.0 8.162417262770473E-4 2.968151731916536E-4 28-29 1.6695853492030514E-4 2.2261137989374016E-4 0.0 0.0018550948324478347 3.3391706984061027E-4 30-31 1.8550948324478348E-4 2.2261137989374016E-4 0.0 0.006233118637024724 3.3391706984061027E-4 32-33 1.8550948324478348E-4 2.2261137989374016E-4 0.0 0.016343385473865425 3.7101896648956696E-4 34-35 1.8550948324478348E-4 2.411623282182185E-4 0.0 0.0303308005105221 3.7101896648956696E-4 36-37 1.8550948324478348E-4 2.5971327654269685E-4 0.0 0.05129337211718263 3.7101896648956696E-4 38-39 1.8550948324478348E-4 2.5971327654269685E-4 0.0 0.08303404470036507 3.7101896648956696E-4 40-41 1.8550948324478348E-4 2.5971327654269685E-4 0.0 0.11707503487578286 3.7101896648956696E-4 42-43 1.8550948324478348E-4 2.5971327654269685E-4 0.0 0.15007717194502984 3.7101896648956696E-4 44-45 2.0406043156926182E-4 2.5971327654269685E-4 0.0 0.1868451515241459 3.895699148140453E-4 46-47 2.2261137989374016E-4 2.5971327654269685E-4 0.0 0.22337196877504378 4.0812086313852364E-4 48-49 2.2261137989374016E-4 2.5971327654269685E-4 0.0 0.26091908818378795 4.0812086313852364E-4 50-51 2.2261137989374016E-4 2.5971327654269685E-4 0.0 0.29638850138019057 4.4522275978748033E-4 52-53 2.2261137989374016E-4 2.5971327654269685E-4 0.0 0.33358315277076966 4.6377370811195867E-4 54-55 2.2261137989374016E-4 4.26671811463002E-4 0.0 0.37324508028850434 4.82324656436437E-4 56-57 2.2261137989374016E-4 5.565284497343504E-4 0.0 0.41389020806743637 4.82324656436437E-4 58-59 2.2261137989374016E-4 5.936303463833071E-4 0.0 0.4535521355851711 4.82324656436437E-4 60-61 2.2261137989374016E-4 5.936303463833071E-4 0.0 0.4934552254311241 4.82324656436437E-4 62-63 2.411623282182185E-4 5.936303463833071E-4 0.0 0.5326719301890712 5.194265530853937E-4 64-65 2.5971327654269685E-4 6.121812947077855E-4 0.0 0.5739848921076846 5.194265530853937E-4 66-67 2.5971327654269685E-4 6.678341396812205E-4 0.0 0.6175054168769107 5.194265530853937E-4 68-69 2.5971327654269685E-4 6.678341396812205E-4 0.0 0.6616937757858181 5.194265530853937E-4 70-71 2.5971327654269685E-4 7.049360363301772E-4 0.0 0.7068653349559229 5.565284497343504E-4 72-73 2.5971327654269685E-4 7.420379329791339E-4 0.0 0.7515360185212667 7.420379329791339E-4 74-75 2.5971327654269685E-4 7.420379329791339E-4 0.0 0.7960397435516904 7.420379329791339E-4 76-77 2.5971327654269685E-4 7.420379329791339E-4 0.0 0.8438640883321955 7.420379329791339E-4 78-79 2.5971327654269685E-4 7.420379329791339E-4 0.0 0.8950090528627823 7.420379329791339E-4 80-81 2.5971327654269685E-4 7.420379329791339E-4 0.0 0.9463766287732629 7.976907779525689E-4 82-83 2.5971327654269685E-4 7.420379329791339E-4 0.0 0.997224778130658 8.904455195749607E-4 84-85 2.5971327654269685E-4 7.420379329791339E-4 0.0 1.0485923540411386 8.904455195749607E-4 86-87 2.5971327654269685E-4 7.605888813036123E-4 0.0 1.1007019678845982 8.904455195749607E-4 88-89 2.5971327654269685E-4 7.791398296280906E-4 0.0 1.1573565640675552 8.904455195749607E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 4650 0.0 41.374557 1 GGTATCA 2730 0.0 38.02759 1 TCAACGC 5960 0.0 32.197086 4 CAACGCA 6015 0.0 31.962637 5 TATCAAC 6080 0.0 31.56103 2 ATCAACG 6220 0.0 30.774862 3 AACGCAG 6465 0.0 30.0338 6 GTACATG 7560 0.0 26.204536 1 TACATGG 7600 0.0 25.373817 2 ACGCAGA 7625 0.0 25.093021 7 CGCAGAG 8195 0.0 23.290184 8 ACATGGG 7955 0.0 22.749207 3 GTACCTG 2605 0.0 21.754253 1 TACCTGG 2705 0.0 20.193144 2 GCAGAGT 9360 0.0 19.884108 9 AGAGTAC 7660 0.0 19.214306 10-11 CATGGGG 6160 0.0 19.122843 4 GAGTACG 420 1.8189894E-12 18.141602 1 GAGTACA 5770 0.0 17.662123 1 GAGTACT 3950 0.0 17.606123 12-13 >>END_MODULE