##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921445_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3172092 Sequences flagged as poor quality 0 Sequence length 101 %GC 49 >>END_MODULE >>Per base sequence quality warn #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.03615216708721 33.0 31.0 34.0 30.0 34.0 2 32.15749858453034 34.0 31.0 34.0 30.0 34.0 3 32.27565720035863 34.0 31.0 34.0 30.0 34.0 4 35.81231250543805 37.0 35.0 37.0 35.0 37.0 5 35.633757785083155 37.0 35.0 37.0 35.0 37.0 6 35.66839202646077 37.0 35.0 37.0 35.0 37.0 7 35.603085913018916 37.0 35.0 37.0 33.0 37.0 8 35.55917735046777 37.0 35.0 37.0 33.0 37.0 9 37.195560532292255 39.0 37.0 39.0 34.0 39.0 10-11 37.11330929241649 39.0 37.0 39.0 34.0 39.0 12-13 37.00810080539909 39.0 37.0 39.0 33.0 39.0 14-15 38.34012065223833 40.0 38.0 41.0 34.0 41.0 16-17 38.249046843534174 40.0 38.0 41.0 33.5 41.0 18-19 38.148254212046815 40.0 38.0 41.0 33.5 41.0 20-21 38.04411773050718 40.0 38.0 41.0 33.0 41.0 22-23 38.013165128880246 40.0 38.0 41.0 33.5 41.0 24-25 38.07230922053963 40.0 38.0 41.0 33.0 41.0 26-27 37.97850755904936 40.0 38.0 41.0 33.0 41.0 28-29 37.855016815401314 40.0 38.0 41.0 33.0 41.0 30-31 37.72319939018162 40.0 38.0 41.0 33.0 41.0 32-33 37.5728468783377 40.0 38.0 41.0 32.5 41.0 34-35 37.4465836741179 40.0 37.0 41.0 32.0 41.0 36-37 37.36595108212498 40.0 37.0 41.0 32.0 41.0 38-39 37.34606436383308 40.0 37.0 41.0 32.0 41.0 40-41 37.19593662478894 40.0 37.0 41.0 31.5 41.0 42-43 36.977539743487895 40.0 37.0 41.0 31.0 41.0 44-45 36.79096224195263 40.0 36.0 41.0 31.0 41.0 46-47 36.543164574041356 39.0 36.0 41.0 30.0 41.0 48-49 36.2393187208946 39.0 35.0 40.0 30.0 41.0 50-51 35.9825194225136 39.0 35.0 40.0 29.0 41.0 52-53 35.69045128577608 38.5 35.0 40.0 28.5 41.0 54-55 35.383360886128145 38.0 34.5 40.0 28.0 41.0 56-57 35.03087725702785 38.0 34.0 40.0 27.5 41.0 58-59 34.66547502405352 37.5 34.0 40.0 26.5 41.0 60-61 34.263717288149266 37.0 33.5 39.5 26.0 41.0 62-63 33.84065626091551 36.0 33.0 39.0 26.0 40.5 64-65 33.35494793341429 36.0 32.5 39.0 25.0 40.0 66-67 32.845936214964766 35.0 32.0 38.5 23.5 40.0 68-69 32.36613881312395 35.0 31.5 38.0 22.0 40.0 70-71 31.840963629049853 35.0 31.0 37.0 21.5 39.0 72-73 31.314158290490944 34.0 30.5 36.5 20.0 39.0 74-75 30.806731015367777 34.0 30.0 36.0 18.0 38.5 76-77 29.462378770855324 32.5 28.5 34.5 18.0 36.0 78-79 30.40665340097324 34.0 30.0 35.0 18.0 37.0 80-81 30.46102020370153 34.0 31.0 35.0 18.0 37.0 82-83 30.15193332980254 34.0 30.0 35.0 17.5 36.0 84-85 29.69256219554792 34.0 30.0 35.0 11.0 36.0 86-87 29.209539004543373 34.0 29.0 35.0 7.0 35.0 88-89 28.70034617533161 33.5 29.0 35.0 2.0 35.0 90-91 28.278360621318676 33.0 28.5 35.0 2.0 35.0 92-93 27.888591030777164 33.0 27.0 35.0 2.0 35.0 94-95 27.447821816012905 33.0 27.0 34.5 2.0 35.0 96-97 26.74560037981244 32.5 25.5 34.0 2.0 35.0 98-99 25.807982082486888 32.0 24.5 34.0 2.0 35.0 100-101 22.198626017152087 28.5 9.5 32.5 2.0 34.5 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 16356.0 3 8954.0 4 5318.0 5 4179.0 6 3562.0 7 3604.0 8 4244.0 9 5076.0 10 6066.0 11 7242.0 12 8624.0 13 9935.0 14 11369.0 15 12458.0 16 14490.0 17 17003.0 18 17242.0 19 15163.0 20 15327.0 21 16176.0 22 17541.0 23 19815.0 24 22439.0 25 27006.0 26 32508.0 27 39261.0 28 48149.0 29 59036.0 30 72882.0 31 91892.0 32 119610.0 33 161926.0 34 233052.0 35 359899.0 36 576019.0 37 739669.0 38 338265.0 39 10735.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.54521918391729 17.888606635838435 13.905054402667972 24.661119777576303 2 16.25179849764761 19.14660734934548 38.164057032393764 26.437537120613147 3 19.71621488271882 22.303396663269133 28.545099210033587 29.435289243978463 4 14.19779294960198 15.305229568822702 34.59285269970008 35.90412478187523 5 15.641921116544644 35.71151600594186 33.0560277320313 15.590535145482196 6 35.237492559084885 33.27369034373479 16.42600741394327 15.062809683237049 7 30.98255395377041 30.530864844093593 19.492481523243203 18.994099678892802 8 27.8797692662609 33.592348092609086 19.105057825450015 19.42282481568 9 26.901232140868032 16.009816231239963 19.1668636245017 37.9220880033903 10-11 26.59757361746844 24.959094832142863 26.312523371564083 22.130808178824612 12-13 26.508447095462362 22.0446841748925 26.83504003481302 24.61182869483212 14-15 23.841208036097488 23.691064730392686 24.246684867671522 28.221042365838304 16-17 24.238594448537203 26.71959991321109 25.006953835363454 24.034851802888255 18-19 24.25343038290259 26.02913852396833 26.328824456895134 23.388606636233945 20-21 24.83134049070662 25.21428918302387 26.211393732683902 23.74297659358561 22-23 24.668618262177997 24.885160841053143 26.121938765694686 24.324282131074177 24-25 24.397321069566477 25.100797327755224 26.19683522408149 24.305046378596813 26-27 24.301784842648544 25.360049215292307 26.132112536782188 24.206053405276958 28-29 24.395699860545818 25.35297516706516 26.122188350648827 24.12913662174019 30-31 24.577957810440488 25.264949714960544 25.914205377840034 24.24288709675894 32-33 24.408836532286564 25.26230933096421 25.84127987974487 24.487574257004347 34-35 24.56900132525245 25.282071322132822 25.98792155426087 24.161005798353862 36-37 24.575098096121035 25.27869765743736 25.915252455142042 24.230951791299564 38-39 24.52928793612192 25.326171658540652 25.91213690105434 24.232403504283084 40-41 24.701305703664232 25.19640734422839 25.89704458815628 24.2052423639511 42-43 24.627930496584476 25.19263944251996 25.77880181135616 24.400628249539405 44-45 24.556720845667883 25.25252652643879 25.783276007701993 24.40747662019134 46-47 24.580201415029265 25.266699513214164 25.7837409589878 24.369358112768765 48-49 24.556172724495596 25.345325095026467 25.66181201767585 24.436690162802083 50-51 24.553035255424525 25.45037756160292 25.602669595331328 24.39391758764122 52-53 24.688833634876485 25.411433797485955 25.499264348204942 24.400468219432618 54-55 24.684401799837797 25.253719909109613 25.558626744883473 24.503251546169118 56-57 24.558729878498603 25.421424473042077 25.590687835358356 24.429157813100964 58-59 24.600199839000194 25.376290153996457 25.55478651290087 24.46872349410248 60-61 24.7210051192936 25.31436775557533 25.589752837554013 24.374874287577057 62-63 24.532571490549905 25.41562513400143 25.58810861871959 24.46369475672908 64-65 24.68082188433749 25.23987915598352 25.52952016286986 24.549778796809125 66-67 24.634081997233213 25.377137475040023 25.486951115111474 24.50182941261529 68-69 24.545894167836984 25.389138935470317 25.51788979191666 24.547077104776037 70-71 24.537225772908865 25.21375848247321 25.627276588137484 24.621739156480444 72-73 24.739961062946556 25.269113317169218 25.40884773347844 24.58207788640579 74-75 24.53527283554578 25.45632926454426 25.36345558835687 24.6449423115531 76-77 24.666877788864415 25.27420457235027 25.44658589951416 24.61233173927115 78-79 24.524185736385245 25.292984416281346 25.51177135235092 24.671058494982493 80-81 24.553147245468402 25.375597877143914 25.49485006516849 24.576404812219195 82-83 24.665566340878577 25.295820296659098 25.413788927913945 24.62482443454838 84-85 24.636957769962947 25.333056069076004 25.3494365218828 24.680549639078244 86-87 24.592133229219073 25.310259652294565 25.474558392886564 24.6230487255998 88-89 24.558338239057594 25.21491033815032 25.437169358806656 24.789582063985435 90-91 24.579867313311585 25.240791157756306 25.479471254610992 24.699870274321118 92-93 24.635796743215927 25.25975768880551 25.505030513623655 24.599415054354907 94-95 24.646223701065214 25.225065884283897 25.429047851899632 24.699662562751254 96-97 24.638668766974163 25.127631827634804 25.516355805709264 24.717343599681772 98-99 24.50649424146727 25.21376461072306 25.440514866849647 24.839226280960027 100-101 25.037698712332425 24.760306180066642 25.539849028598056 24.66214607900288 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 308.0 1 273.5 2 370.5 3 523.0 4 443.5 5 389.5 6 681.5 7 1540.0 8 2289.0 9 2212.0 10 1581.5 11 1045.5 12 891.5 13 903.0 14 988.5 15 1006.5 16 1011.0 17 1078.5 18 1128.0 19 1223.0 20 1322.5 21 1360.0 22 1434.5 23 1519.0 24 1671.0 25 1998.0 26 2464.5 27 3093.5 28 4102.0 29 5748.5 30 8348.0 31 11627.0 32 15552.0 33 20416.0 34 25978.5 35 32405.0 36 39862.5 37 48019.0 38 56636.0 39 64876.5 40 73266.0 41 81894.0 42 90681.0 43 99936.0 44 109519.0 45 118946.5 46 126960.5 47 133637.0 48 139878.0 49 143870.0 50 143865.0 51 144051.0 52 144277.5 53 143553.0 54 142180.5 55 137433.0 56 129382.5 57 118623.0 58 107987.0 59 96617.0 60 83071.5 61 69810.0 62 56454.0 63 42883.0 64 31385.5 65 23289.0 66 17719.0 67 13670.5 68 10454.0 69 7901.5 70 5928.5 71 4406.5 72 3177.0 73 2373.5 74 1794.0 75 1239.0 76 797.5 77 473.5 78 260.5 79 130.0 80 65.0 81 35.5 82 23.0 83 11.0 84 5.0 85 3.5 86 2.5 87 1.5 88 1.0 89 0.0 90 0.0 91 0.5 92 0.5 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.31017385372177103 2 0.0 3 0.0058321133182770235 4 0.05951908078328119 5 6.304987371110295E-4 6 0.06680134119691358 7 0.0767316963064123 8 0.10775223417227495 9 0.09630868209370977 10-11 0.10015472439008705 12-13 0.09969761280568155 14-15 0.06684862860219691 16-17 0.03719942548955074 18-19 0.040115482148689256 20-21 0.028687692538551846 22-23 0.04265323956556115 24-25 0.035465553962495414 26-27 0.022697954535997066 28-29 0.025204187016013405 30-31 0.002364370264166361 32-33 0.0053277143285882 34-35 0.007676322124326784 36-37 0.010418991630759763 38-39 0.015368406717081347 40-41 0.019608510724153018 42-43 0.0032785934329773534 44-45 0.014028596900720407 46-47 0.024573688278902377 48-49 0.0025535198852996697 50-51 0.007108873260926859 52-53 0.002364370264166361 54-55 0.004397728691349432 56-57 0.0035307929278217656 58-59 0.001213710068938732 60-61 0.005359239265443751 62-63 0.015258069438086917 64-65 0.007392597692626821 66-67 0.039894807590700396 68-69 0.06355427270079178 70-71 0.01276759942649835 72-73 0.03393659452500117 74-75 0.05222105790122102 76-77 0.3034748046399663 78-79 0.07381563964727379 80-81 0.034078456740851144 82-83 0.028687692538551846 84-85 0.019829185282141882 86-87 0.11910121144027348 88-89 0.5284998039148928 90-91 0.13409131891508821 92-93 0.04857992769440483 94-95 0.007660559655899009 96-97 0.005532626418149284 98-99 0.010103742262204249 100-101 0.0073453102873434935 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3172092.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.65600989118105 #Duplication Level Percentage of deduplicated Percentage of total 1 72.72663020679228 41.20400680348289 2 15.481262198740275 17.542130885195924 3 5.135960119466512 8.729490219876183 4 2.2909175093347454 5.191769802749968 5 1.2091085678027866 3.425163348847321 6 0.724798582079388 2.4638517381242284 7 0.5039983239292927 1.9988173817973673 8 0.31577579953681173 1.4312477457562567 9 0.2637253796870695 1.3447464948095476 >10 1.2723458004686186 12.725249976894476 >50 0.06019998690075438 2.2997472084699644 >100 0.014831824807185198 1.2544301438376415 >500 2.7856278485008476E-4 0.09308374515430844 >1k 1.6713766942396297E-4 0.29626450500385715 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4051 0.12770751920183904 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 6.304987371110295E-5 0.0 5 0.0 0.0 0.0 6.304987371110295E-5 0.0 6 0.0 0.0 0.0 6.304987371110295E-5 3.1524936855551475E-5 7 0.0 0.0 0.0 6.304987371110295E-5 3.1524936855551475E-5 8 0.0 0.0 0.0 6.304987371110295E-5 3.1524936855551475E-5 9 0.0 0.0 0.0 6.304987371110295E-5 6.304987371110295E-5 10-11 0.0 0.0 0.0 7.881234213887869E-5 7.881234213887869E-5 12-13 0.0 0.0 0.0 1.260997474222059E-4 9.457481056665444E-5 14-15 0.0 0.0 0.0 1.260997474222059E-4 1.2609974742220593E-4 16-17 0.0 0.0 0.0 1.260997474222059E-4 1.8914962113330888E-4 18-19 0.0 3.1524936855551475E-5 0.0 1.576246842777574E-4 2.2067455798886035E-4 20-21 0.0 3.1524936855551475E-5 0.0 1.8914962113330888E-4 2.2067455798886035E-4 22-23 0.0 3.1524936855551475E-5 0.0 2.2067455798886033E-4 2.2067455798886035E-4 24-25 0.0 3.1524936855551475E-5 0.0 3.62536773838842E-4 2.2067455798886035E-4 26-27 0.0 3.1524936855551475E-5 0.0 5.832113318277024E-4 2.3643702641663606E-4 28-29 0.0 3.1524936855551475E-5 0.0 0.001465909563783144 2.8372443169996333E-4 30-31 0.0 3.1524936855551475E-5 0.0 0.005233139518021545 2.8372443169996333E-4 32-33 0.0 3.1524936855551475E-5 0.0 0.013413860632037153 2.8372443169996333E-4 34-35 0.0 3.1524936855551475E-5 0.0 0.023627940173235832 2.8372443169996333E-4 36-37 0.0 4.728740528332721E-5 0.0 0.03998938240126705 2.8372443169996333E-4 38-39 0.0 6.304987371110295E-5 0.0 0.06424782131161391 3.152493685555148E-4 40-41 0.0 6.304987371110295E-5 0.0 0.09139079194424374 3.152493685555148E-4 42-43 0.0 6.304987371110295E-5 0.0 0.11673684117610712 3.152493685555148E-4 44-45 0.0 6.304987371110295E-5 0.0 0.14597622010963113 3.467743054110663E-4 46-47 0.0 6.304987371110295E-5 0.0 0.1767130335437938 3.7829924226661776E-4 48-49 0.0 6.304987371110295E-5 0.0 0.2054322510192012 3.7829924226661776E-4 50-51 0.0 6.304987371110295E-5 0.0 0.23399384381033084 4.0982417912216923E-4 52-53 0.0 6.304987371110295E-5 0.0 0.261325964064094 4.413491159777207E-4 54-55 0.0 6.304987371110295E-5 0.0 0.29058110546604576 4.5711158440549644E-4 56-57 0.0 6.304987371110295E-5 0.0 0.3233039899221082 5.043989896888236E-4 58-59 0.0 6.304987371110295E-5 0.0 0.3540723282931264 5.043989896888236E-4 60-61 0.0 6.304987371110295E-5 0.0 0.38485642913257245 5.043989896888236E-4 62-63 0.0 6.304987371110295E-5 0.0 0.4166650904198239 5.359239265443752E-4 64-65 0.0 6.304987371110295E-5 0.0 0.4505859224763973 5.674488633999267E-4 66-67 0.0 6.304987371110295E-5 0.0 0.48690264973399255 5.832113318277024E-4 68-69 0.0 9.457481056665444E-5 0.0 0.5231720895863046 6.147362686832539E-4 70-71 0.0 9.457481056665444E-5 0.0 0.5592523798174832 6.462612055388053E-4 72-73 0.0 9.457481056665444E-5 0.0 0.5959946937226285 6.935486108221326E-4 74-75 0.0 9.457481056665444E-5 0.0 0.6339507176967125 7.723609529610112E-4 76-77 0.0 9.457481056665444E-5 0.0 0.6741765371243962 7.88123421388787E-4 78-79 0.0 9.457481056665444E-5 0.0 0.7153323421893186 7.88123421388787E-4 80-81 0.0 9.457481056665444E-5 0.0 0.7592938666343851 9.142231688109929E-4 82-83 0.0 9.457481056665444E-5 0.0 0.8013796573365464 9.457481056665444E-4 84-85 0.0 9.457481056665444E-5 0.0 0.8459401555818684 9.772730425220957E-4 86-87 0.0 9.457481056665444E-5 0.0 0.8916355515539902 0.0010087979793776472 88-89 0.0 9.457481056665444E-5 0.0 0.938891431900462 0.0010718478530887502 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2685 0.0 46.11693 1 GTATCAA 5085 0.0 43.269543 1 TCAACGC 6640 0.0 32.121086 4 TATCAAC 6740 0.0 31.996393 2 CAACGCA 6815 0.0 31.280453 5 ATCAACG 6855 0.0 30.905752 3 AACGCAG 7460 0.0 28.895494 6 ACGCAGA 8640 0.0 24.564827 7 GTACATG 9400 0.0 24.06562 1 CGCAGAG 9255 0.0 23.035088 8 TACATGG 9605 0.0 22.996443 2 ACATGGG 10000 0.0 20.805878 3 GTACCTG 2920 0.0 19.897947 1 GAGTACA 7260 0.0 19.41719 1 GCAGAGT 10920 0.0 19.304857 9 AGTACAT 7030 0.0 19.257265 2 CATGGGG 7720 0.0 18.951578 4 AGAGTAC 8990 0.0 18.035736 10-11 TACCTGG 3295 0.0 16.866909 2 GTATAGG 710 0.0 16.769222 1 >>END_MODULE