##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921443_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3011500 Sequences flagged as poor quality 0 Sequence length 98 %GC 49 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.032687697160885 31.0 31.0 34.0 28.0 34.0 2 31.15725253196082 33.0 31.0 34.0 28.0 34.0 3 31.288387514527646 33.0 31.0 34.0 28.0 34.0 4 34.838426697658974 37.0 35.0 37.0 32.0 37.0 5 34.8363254192263 37.0 35.0 37.0 32.0 37.0 6 34.932442968620286 37.0 35.0 37.0 32.0 37.0 7 34.83926083347169 37.0 35.0 37.0 32.0 37.0 8 34.82859870496431 37.0 35.0 37.0 32.0 37.0 9 36.374140461564004 39.0 37.0 39.0 32.0 39.0 10-11 36.27029188112236 39.0 37.0 39.0 32.0 39.0 12-13 36.1328102274614 39.0 37.0 39.0 32.0 39.0 14-15 37.245933089822344 40.0 38.0 41.0 32.0 41.0 16-17 37.120527311970775 40.0 37.5 41.0 32.0 41.0 18-19 36.95796164701976 40.0 37.0 41.0 31.0 41.0 20-21 36.851262161713436 40.0 37.0 41.0 31.0 41.0 22-23 36.8990521334883 40.0 37.0 41.0 31.0 41.0 24-25 36.77984177320272 40.0 37.0 41.0 31.0 41.0 26-27 36.54001859538435 40.0 37.0 41.0 30.0 41.0 28-29 36.329509214677074 39.0 36.0 41.0 30.0 41.0 30-31 36.09473966461896 39.0 36.0 40.5 29.5 41.0 32-33 35.844018761414574 39.0 35.5 40.0 28.5 41.0 34-35 35.44311472688029 39.0 35.0 40.0 26.5 41.0 36-37 35.07781554042836 38.0 35.0 40.0 25.0 41.0 38-39 34.864622613315625 38.0 34.5 40.0 25.0 41.0 40-41 34.61275477336875 38.0 34.0 40.0 24.0 41.0 42-43 34.332087829985056 38.0 33.5 40.0 23.5 41.0 44-45 34.0233747302009 38.0 33.0 40.0 22.5 41.0 46-47 33.73958193591234 38.0 33.0 40.0 21.5 41.0 48-49 33.5489734351652 38.0 33.0 40.0 20.0 41.0 50-51 32.761239747634065 37.0 32.0 39.0 19.5 40.0 52-53 33.253933753943215 37.5 33.0 39.0 21.5 40.0 54-55 33.704350157728705 38.0 33.0 40.0 22.0 41.0 56-57 33.55934285239914 37.5 33.0 40.0 20.5 41.0 58-59 33.23371907687199 37.0 33.0 40.0 19.5 41.0 60-61 32.78427428191931 36.0 32.5 39.0 17.5 41.0 62-63 32.30931280092977 36.0 32.0 39.0 13.5 40.0 64-65 31.779716088328076 35.0 31.0 38.5 8.0 40.0 66-67 31.306584094305165 35.0 31.0 38.0 7.0 40.0 68-69 30.796144612319445 35.0 30.0 37.0 4.0 39.5 70-71 30.28669649676241 34.0 30.0 37.0 2.0 39.0 72-73 29.750260501411258 34.0 29.0 36.0 2.0 39.0 74-75 29.173038352980242 34.0 29.0 35.5 2.0 38.0 76-77 28.608613979744312 34.0 28.0 35.0 2.0 37.0 78-79 28.07109496928441 33.0 27.0 35.0 2.0 36.5 80-81 27.512637556035198 33.0 26.0 35.0 2.0 36.0 82-83 26.907229287730367 32.5 25.5 35.0 2.0 35.5 84-85 26.307051303337207 32.0 24.5 34.0 2.0 35.0 86-87 25.710190104599036 32.0 23.5 34.0 2.0 35.0 88-89 25.080758592063756 31.0 20.0 34.0 2.0 35.0 90-91 24.357561514195584 31.0 17.5 34.0 2.0 35.0 92-93 23.545934584094304 30.5 4.5 34.0 2.0 35.0 94-95 22.63110161049311 30.0 2.0 34.0 2.0 35.0 96-97 21.72573169516852 29.0 2.0 34.0 2.0 35.0 98 21.090451270131165 29.0 2.0 34.0 2.0 34.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 59055.0 3 10636.0 4 8436.0 5 7382.0 6 7183.0 7 7479.0 8 8111.0 9 9607.0 10 10909.0 11 12546.0 12 14578.0 13 17957.0 14 14652.0 15 14206.0 16 15995.0 17 18593.0 18 21301.0 19 20645.0 20 21276.0 21 23517.0 22 25765.0 23 29223.0 24 32589.0 25 38074.0 26 43373.0 27 50411.0 28 59039.0 29 70226.0 30 85113.0 31 105872.0 32 134494.0 33 178468.0 34 246901.0 35 354223.0 36 487337.0 37 514640.0 38 222023.0 39 9665.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.58787175407912 17.153954418248713 13.264203556989864 24.993970270682304 2 16.442288047332955 18.730435042597332 38.09601799236919 26.731258917700522 3 20.359196290161073 21.82537072142918 27.37331815696116 30.44211483144858 4 14.10484028507755 14.394841441228337 34.06252782403119 37.43779044966292 5 16.06795645534493 35.50941425235539 32.23761766984794 16.185011622451732 6 35.894630340627224 32.57355225536991 16.073159345360423 15.458658058642442 7 31.581636398728225 30.134097115850643 18.977862863965193 19.306403621455935 8 28.188854304081495 32.910743298806096 18.87619746020865 20.02420493690376 9 27.070134660913464 16.08787613414351 18.733970223761812 38.10801898118121 10-11 26.980243478561206 24.5542918268929 25.690551680827017 22.774913013718876 12-13 27.01050551992685 21.692340313822292 26.40970382002151 24.887450346229354 14-15 24.213887912409433 23.278963953544558 23.840054491704944 28.66709364234106 16-17 24.597700996735114 26.390283252372615 24.51167019966916 24.500345551223113 18-19 24.642424224302147 25.59674592380809 26.028888464731143 23.73194138715862 20-21 25.205140927521803 24.707953961228025 25.786374940221577 24.300530171028594 22-23 24.930751835552083 24.44015225206315 25.787456372451505 24.84163953993326 24-25 24.615780288661547 24.73907417769738 25.8431866544209 24.80195887922017 26-27 24.586226309499594 24.862197292666163 25.953186627371377 24.598389770462862 28-29 24.600000631444576 25.051450270333053 25.829506308380584 24.519042789841787 30-31 24.78959210171343 24.871854845461662 25.686309167046527 24.65224388577838 32-33 24.61225282243673 24.92352345333357 25.586289742767427 24.877933981462274 34-35 24.81646757353506 24.956643094622144 25.735458956490753 24.491430375352046 36-37 24.785526093350857 24.912917479915727 25.650872094771444 24.650684331961976 38-39 24.81300586590318 24.930597748440192 25.59188721197043 24.6645091736862 40-41 24.864903670770158 24.95894978224811 25.572628624711268 24.603517922270463 42-43 24.90143910589162 24.839581921545197 25.464162557876357 24.794816414686824 44-45 24.809262793206774 24.88891707393596 25.441457107596694 24.860363025260572 46-47 24.954565941418224 24.927616715595224 25.507000040548988 24.610817302437564 48-49 24.85849283270619 25.019054496527477 25.29085637781696 24.831596292949367 50-51 24.754470659049762 25.178937334761127 25.256751775272296 24.809840230916812 52-53 24.86116935559968 25.175013206259305 25.242201042104544 24.72161639603647 54-55 24.813654868982393 24.92822348192414 25.366496010300825 24.891625638792643 56-57 24.80932923275752 25.026602118423153 25.34676211831634 24.817306530502982 58-59 24.903529758818973 25.0184581146377 25.3287713494688 24.74924077707453 60-61 24.96410534705173 24.871123010358218 25.39914653829364 24.76562510429641 62-63 24.744838737080464 25.079078921038573 25.35452207258621 24.82156026929475 64-65 24.78111529666512 24.973529853134295 25.340581443504785 24.9047734066958 66-67 24.757292576652535 25.123424138235034 25.284316318434275 24.834966966678156 68-69 24.816456107095405 25.056680770728306 25.25403082265682 24.87283229951947 70-71 24.731036077204326 24.89724266211439 25.39713015073189 24.974591109949394 72-73 24.868974385274097 25.01627344389102 25.213289270367657 24.90146290046723 74-75 24.693847060428208 25.139340815311765 25.25344471038487 24.913367413875154 76-77 24.86449571861338 24.9344721457631 25.248265390102738 24.952766745520783 78-79 24.79493666833203 24.856053779055223 25.353712151582442 24.995297401030303 80-81 24.800791348395567 25.067531253475785 25.213474467358125 24.918202930770523 82-83 24.89780424014206 25.059089155532533 25.16600087297337 24.877105731352035 84-85 24.94239073329873 25.080459566973058 25.083560738699106 24.89358896102911 86-87 24.85584908730822 25.017382144061205 25.235771902251823 24.89099686637875 88-89 24.762566485136734 24.882415268194592 25.20672080487147 25.148297441797208 90-91 24.85877034569124 24.891887069636834 25.184601557119677 25.064741027552245 92-93 24.857722218211123 25.042390283408373 25.217754079496807 24.882133418883697 94-95 24.883442089587582 24.87842257016071 25.27458105356544 24.963554286686268 96-97 24.89263487051317 24.898604695217102 25.231113925933485 24.977646508336242 98 24.973671274777182 24.933019322849866 25.111401021667923 24.98190838070503 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 474.0 1 362.0 2 417.5 3 616.5 4 538.5 5 492.5 6 876.5 7 1948.0 8 2790.5 9 2550.0 10 1888.5 11 1491.0 12 1538.5 13 1709.0 14 1913.5 15 2130.0 16 2346.5 17 2462.5 18 2465.0 19 2397.0 20 2246.5 21 2133.5 22 2074.0 23 2078.0 24 2181.5 25 2462.5 26 2916.0 27 3687.0 28 4945.0 29 6876.5 30 9448.0 31 12692.5 32 16615.0 33 20948.0 34 26362.0 35 32537.5 36 39013.0 37 46327.0 38 54067.5 39 61571.5 40 68905.5 41 77261.0 42 86688.0 43 96566.0 44 105632.5 45 114248.5 46 124598.5 47 134885.5 48 139618.0 49 138077.5 50 136376.0 51 135827.5 52 136244.5 53 138462.5 54 137657.0 55 133133.0 56 125454.0 57 116922.0 58 108953.5 59 99154.0 60 87126.0 61 72579.5 62 58107.5 63 44871.5 64 33532.0 65 25567.0 66 19952.0 67 15596.5 68 12268.0 69 9702.0 70 7574.0 71 5891.0 72 4760.5 73 3699.5 74 2935.0 75 2335.5 76 1645.5 77 1043.0 78 645.0 79 398.5 80 245.0 81 153.5 82 76.0 83 44.0 84 24.0 85 14.5 86 14.0 87 11.5 88 7.0 89 6.0 90 7.5 91 4.5 92 5.0 93 6.5 94 4.5 95 2.0 96 1.0 97 1.5 98 0.5 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.46000332060435 2 0.04433006807238917 3 0.05173501577287066 4 0.05020753777187448 5 0.060036526647849905 6 0.06325751286734185 7 0.0404781670263988 8 0.01806408766395484 9 0.010194255354474513 10-11 0.013049975095467375 12-13 0.009081852897227296 14-15 0.013265814378216834 16-17 0.012253030051469369 18-19 0.05357795118711606 20-21 0.08205213348829486 22-23 0.09750954673750623 24-25 0.06720903204383197 26-27 0.08261663622779346 28-29 0.08389506890254025 30-31 0.05419226299186451 32-33 0.031097459737672258 34-35 0.38816204549227956 36-37 0.6097293707454756 38-39 0.5585422546903537 40-41 0.5542918811223643 42-43 0.5276440312136809 44-45 0.5122862360949693 46-47 0.5022248049144944 48-49 0.4925120371907687 50-51 0.5070396812219824 52-53 0.5862360949692844 54-55 0.5574630582766064 56-57 0.5146272621617134 58-59 0.4931263489955172 60-61 0.5057944545907355 62-63 0.5180308816204549 64-65 0.5360949692844097 66-67 0.5627760252365931 68-69 0.5165034036194587 70-71 0.46573136310808566 72-73 0.4488626930101278 74-75 0.42892246388842764 76-77 0.4432176656151419 78-79 0.43692512037190767 80-81 0.4341192096961647 82-83 0.4549061929271127 84-85 0.4195085505562013 86-87 0.42281255188444294 88-89 0.4501245226631247 90-91 0.4321766561514196 92-93 0.4275776191266811 94-95 0.4384858044164038 96-97 0.43456749128341354 98 0.42749460401793127 >>END_MODULE >>Sequence Length Distribution pass #Length Count 98 3011500.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.27103372798086 #Duplication Level Percentage of deduplicated Percentage of total 1 73.73887875566852 40.01885176012377 2 14.1920166557129 15.404308291805219 3 5.067507450695501 8.250566033204697 4 2.2850480478802457 4.960476787062626 5 1.2369713629529249 3.356585727968232 6 0.7763722768904252 2.528071561475374 7 0.5263492179861256 1.999586131341496 8 0.3754975890787837 1.6302913857336132 9 0.27017000553846166 1.3196164934579968 >10 1.41527488262804 13.60827875933447 >50 0.08259095798845993 3.0534507975807488 >100 0.03185040177168231 3.010667797630136 >500 0.001165646206633172 0.4244801329256471 >1k 3.067490014165359E-4 0.43476834035605355 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4489 0.14906192927112735 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 9.961813049975096E-5 2 0.0 0.0 0.0 0.0 9.961813049975096E-5 3 0.0 0.0 0.0 0.0 9.961813049975096E-5 4 0.0 0.0 0.0 3.3206043499916987E-5 9.961813049975096E-5 5 6.641208699983397E-5 0.0 0.0 3.3206043499916987E-5 1.3282417399966795E-4 6 6.641208699983397E-5 0.0 0.0 3.3206043499916987E-5 1.6603021749958492E-4 7 6.641208699983397E-5 0.0 0.0 3.3206043499916987E-5 1.6603021749958492E-4 8 6.641208699983397E-5 0.0 0.0 3.3206043499916987E-5 1.6603021749958492E-4 9 6.641208699983397E-5 0.0 0.0 9.961813049975096E-5 1.6603021749958492E-4 10-11 1.3282417399966795E-4 0.0 0.0 1.9923626099950192E-4 1.6603021749958492E-4 12-13 1.3282417399966795E-4 0.0 0.0 2.656483479993359E-4 5.811057612485472E-4 14-15 1.3282417399966795E-4 1.6603021749958493E-5 0.0 2.656483479993359E-4 7.139299352482152E-4 16-17 1.4942719574962643E-4 3.3206043499916987E-5 0.0 3.9847252199900384E-4 8.965631744977585E-4 18-19 1.6603021749958492E-4 3.3206043499916987E-5 0.0 5.312966959986718E-4 9.297692179976756E-4 20-21 1.6603021749958492E-4 3.3206043499916987E-5 0.0 5.312966959986718E-4 9.961813049975095E-4 22-23 1.6603021749958492E-4 3.3206043499916987E-5 0.0 6.143118047484642E-4 0.0010625933919973436 24-25 1.6603021749958492E-4 3.3206043499916987E-5 0.0 6.973269134982567E-4 0.0010957994354972606 26-27 1.6603021749958492E-4 6.641208699983397E-5 0.0 8.301510874979246E-4 0.0011622115224970944 28-29 1.6603021749958492E-4 6.641208699983397E-5 0.0 0.0012286236094969285 0.001278432674746804 30-31 1.6603021749958492E-4 6.641208699983397E-5 0.0 0.0037190768719907023 0.0012950356964967623 32-33 1.6603021749958492E-4 6.641208699983397E-5 0.0 0.009297692179976755 0.0013614477834965964 34-35 1.6603021749958492E-4 9.961813049975096E-5 0.0 0.016984891250207537 0.0013946538269965134 36-37 1.6603021749958492E-4 1.1622115224970946E-4 0.0 0.027610825170180972 0.001411256848746472 38-39 1.6603021749958492E-4 1.3282417399966795E-4 0.0 0.043898389506890255 0.0015440810227461397 40-41 1.9923626099950192E-4 1.3282417399966795E-4 0.0 0.061630416735845926 0.0015606840444960983 42-43 1.9923626099950192E-4 1.6603021749958492E-4 0.0 0.07972771044330068 0.0015606840444960983 44-45 1.9923626099950192E-4 1.6603021749958492E-4 0.0 0.09898721567325253 0.0016270961314959324 46-47 1.9923626099950192E-4 1.6603021749958492E-4 0.0 0.11932591731695169 0.0017101112402457246 48-49 1.9923626099950192E-4 1.6603021749958492E-4 0.0 0.14120869998339697 0.001793126348995517 50-51 1.9923626099950192E-4 1.6603021749958492E-4 0.0 0.16282583430184294 0.0018263323924954341 52-53 1.9923626099950192E-4 1.6603021749958492E-4 0.0 0.18426033538103936 0.0019591565664951022 54-55 1.9923626099950192E-4 1.6603021749958492E-4 0.0 0.20692346006973267 0.0019591565664951022 56-57 1.9923626099950192E-4 1.6603021749958492E-4 0.0 0.22988543914992526 0.002058774696994853 58-59 1.9923626099950192E-4 1.6603021749958492E-4 0.0 0.25397642370911505 0.002158392827494604 60-61 1.9923626099950192E-4 1.6603021749958492E-4 0.0 0.27854889589905363 0.002241407936244396 62-63 1.9923626099950192E-4 1.9923626099950192E-4 0.0 0.30459903702473845 0.002457247218993857 64-65 1.9923626099950192E-4 1.9923626099950192E-4 0.0 0.33046654491117383 0.002523659305993691 66-67 1.9923626099950192E-4 2.324423044994189E-4 0.0 0.35942221484310144 0.0025402623277436497 68-69 1.9923626099950192E-4 2.324423044994189E-4 0.0 0.3902540262327744 0.002556865349493608 70-71 1.9923626099950192E-4 2.324423044994189E-4 0.0 0.4182135148597045 0.002573468371243566 72-73 1.9923626099950192E-4 2.324423044994189E-4 0.0 0.4461065913996347 0.002673086501743317 74-75 1.9923626099950192E-4 2.324423044994189E-4 0.0 0.47587580939731033 0.0028391167192429023 76-77 2.158392827494604E-4 2.656483479993359E-4 0.0 0.5071392993524821 0.0029221318279926945 78-79 2.324423044994189E-4 2.656483479993359E-4 0.0 0.5393491615474015 0.0029885439149925285 80-81 2.490453262493774E-4 2.656483479993359E-4 0.0 0.5746803918313133 0.003005146936742487 82-83 2.656483479993359E-4 2.656483479993359E-4 0.0 0.6089988377884775 0.0031545741324921135 84-85 2.656483479993359E-4 2.656483479993359E-4 0.0 0.6436659472023909 0.0031877801759920307 86 2.656483479993359E-4 2.656483479993359E-4 0.0 0.67199070230782 0.0031877801759920307 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 7335 0.0 32.38212 1 TCAACGC 8700 0.0 26.984941 4 TATCAAC 8885 0.0 26.423067 2 CAACGCA 9010 0.0 25.954708 5 GTACATG 10790 0.0 25.810095 1 ATCAACG 9140 0.0 25.685883 3 GGTATCA 4870 0.0 25.142494 1 AACGCAG 9385 0.0 24.96109 6 TACATGG 11145 0.0 24.315216 2 ACATGGG 11395 0.0 22.775757 3 ACGCAGA 11010 0.0 21.228313 7 TCGCGTA 220 8.264033E-8 20.82684 9 GAGTACA 8125 0.0 19.885633 1 AGTACAT 7815 0.0 19.831633 2 CGCAGAG 11795 0.0 19.732868 8 CATGGGG 9115 0.0 19.51847 4 GCAGAGT 12915 0.0 17.845127 9 AGAGTAC 9505 0.0 17.594608 10-11 GTATATA 600 0.0 16.878239 1 GTACTTT 4605 0.0 16.130943 14-15 >>END_MODULE