##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921443_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3011500 Sequences flagged as poor quality 0 Sequence length 101 %GC 49 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.124792628258344 31.0 31.0 34.0 28.0 34.0 2 31.2538472521999 31.0 31.0 34.0 28.0 34.0 3 31.380672090320438 33.0 31.0 34.0 28.0 34.0 4 35.03271592229786 37.0 35.0 37.0 32.0 37.0 5 34.70391167192429 37.0 35.0 37.0 32.0 37.0 6 34.73043699153246 37.0 35.0 37.0 32.0 37.0 7 34.62757961148929 37.0 35.0 37.0 32.0 37.0 8 34.555869500249045 37.0 35.0 37.0 32.0 37.0 9 36.053233936576454 39.0 37.0 39.0 32.0 39.0 10-11 35.90823360451603 39.0 36.0 39.0 30.5 39.0 12-13 35.743181471027725 39.0 35.0 39.0 30.0 39.0 14-15 36.820387016436996 40.0 37.0 41.0 31.0 41.0 16-17 36.66895168520671 40.0 36.5 41.0 30.5 41.0 18-19 36.526251867839946 39.0 36.0 41.0 30.0 41.0 20-21 36.36760966295866 39.0 36.0 40.5 30.0 41.0 22-23 36.302725884110906 39.0 36.0 40.0 29.5 41.0 24-25 36.329292213182796 39.0 36.0 41.0 30.0 41.0 26-27 36.167267806740824 39.0 36.0 40.5 29.0 41.0 28-29 35.97380325419226 39.0 36.0 40.0 29.0 41.0 30-31 35.77536344014611 39.0 35.0 40.0 28.0 41.0 32-33 35.547818196911834 38.5 35.0 40.0 27.0 41.0 34-35 35.3435435829321 38.0 35.0 40.0 27.0 41.0 36-37 35.18125983729038 38.0 35.0 40.0 26.5 41.0 38-39 35.09211024406442 38.0 35.0 40.0 26.0 41.0 40-41 34.86035148597045 38.0 34.0 40.0 25.5 41.0 42-43 34.52709247883115 38.0 34.0 40.0 24.0 41.0 44-45 34.24004283579612 38.0 33.0 40.0 24.0 41.0 46-47 33.87179744313465 38.0 33.0 40.0 22.5 41.0 48-49 33.421907189108424 37.5 33.0 40.0 20.5 41.0 50-51 33.03864087663955 37.0 32.0 40.0 18.5 40.5 52-53 32.62689340860037 36.5 31.5 39.0 17.5 40.0 54-55 32.199613149593226 36.0 31.0 39.0 13.5 40.0 56-57 31.70620903204383 35.5 30.5 39.0 10.0 40.0 58-59 31.19923443466711 35.0 29.5 38.5 8.0 40.0 60-61 30.662690353644365 35.0 29.0 38.0 6.5 40.0 62-63 30.129903868504066 34.0 28.0 38.0 2.0 40.0 64-65 29.491868670097958 34.0 28.0 37.0 2.0 39.0 66-67 28.860454590735515 33.5 26.5 36.5 2.0 39.0 68-69 28.25896828822846 33.0 26.0 36.0 2.0 39.0 70-71 27.60425834301843 32.5 25.5 35.0 2.0 38.0 72-73 26.960580275610162 32.0 24.0 35.0 2.0 37.5 74-75 26.35721999003819 31.0 22.5 35.0 2.0 36.5 76-77 25.457714594056117 30.5 22.5 33.5 2.0 35.0 78-79 26.417326913498258 31.5 24.5 34.0 2.0 36.0 80-81 26.403389672920472 32.0 24.5 35.0 2.0 36.0 82-83 25.95476174663789 32.0 23.5 34.0 2.0 35.0 84-85 25.309393491615474 31.0 20.5 34.0 2.0 35.0 86-87 24.621120039847252 31.0 18.5 34.0 2.0 35.0 88-89 23.935114892910512 30.5 14.0 34.0 2.0 35.0 90-91 23.234443964801592 30.0 7.0 34.0 2.0 35.0 92-93 22.57972787647352 29.5 2.0 34.0 2.0 35.0 94-95 21.811280591067572 29.0 2.0 34.0 2.0 35.0 96-97 20.726189440478166 29.0 2.0 33.5 2.0 34.5 98-99 19.39546023576291 27.0 2.0 33.0 2.0 34.0 100-101 16.151606010293875 13.5 2.0 30.0 2.0 33.5 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 43781.0 3 19903.0 4 11614.0 5 8453.0 6 7308.0 7 7602.0 8 8722.0 9 10294.0 10 12092.0 11 13988.0 12 16160.0 13 18820.0 14 20856.0 15 23545.0 16 26465.0 17 29715.0 18 30382.0 19 29167.0 20 30109.0 21 31646.0 22 33728.0 23 37209.0 24 41956.0 25 48067.0 26 56803.0 27 68766.0 28 82817.0 29 99332.0 30 120605.0 31 146775.0 32 183296.0 33 232246.0 34 298956.0 35 380010.0 36 420452.0 37 296382.0 38 62745.0 39 733.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.65977923859597 18.092862873934987 13.798403758026422 24.448954129442615 2 16.797111074215508 19.602424041175496 37.25761248547236 26.34285239913664 3 20.555553895163513 22.572830606471477 27.736517035456345 29.135098462908672 4 14.73874286929336 15.194476837870074 34.03698498606252 36.02979530677405 5 16.09621701460144 35.730291112288825 32.23503760936469 15.93845426374505 6 35.84759593532456 33.05472639460737 15.830325317569383 15.267352352498692 7 31.63142291111051 30.274916578665273 18.984708691569345 19.10895181865488 8 28.309620771858167 33.13320250540796 18.696294405377774 19.860882317356108 9 27.095174632505675 16.156689011562403 18.644018225990315 38.104118129941604 10-11 27.098503862279088 24.76001489640072 25.640454662611646 22.50102657870855 12-13 27.1812734107293 21.828305254306578 26.41672510693739 24.573696228026733 14-15 24.235940619620486 23.363090639838575 23.95861887023907 28.442349870301868 16-17 24.56870830143824 26.459610555716196 24.64643572432076 24.325245418524805 18-19 24.66975249229222 25.697096911190304 26.13552243258151 23.497628163935968 20-21 25.275320400987205 24.71782907706945 25.94187203424298 24.064978487700365 22-23 24.979458201446985 24.461856367359612 25.989432039824266 24.569253391369138 24-25 24.6483667399255 24.822088658964773 25.996389042099665 24.533155559010066 26-27 24.579021642344507 24.888081748233006 26.17746237590517 24.35543423351732 28-29 24.61066645055477 25.143450912818118 25.982833054225708 24.263049582401404 30-31 24.803455529893853 24.919331674085683 25.81107489693349 24.46613789908697 32-33 24.586338227837004 24.939055309983573 25.825970324809212 24.64863613737021 34-35 24.889120905742434 24.87442613603438 25.952839585750294 24.283613372472896 36-37 24.792145127376337 25.020345044651165 25.78697256270848 24.400537265264013 38-39 24.835820082589787 24.963749897875342 25.766416497233834 24.434013522301036 40-41 24.889493284904894 24.92820260234222 25.769096513570844 24.41320759918204 42-43 24.906903827519542 24.882629419785204 25.65160679311497 24.55885995958029 44-45 24.880787258247253 24.832084263984513 25.662874652308275 24.62425382545996 46-47 24.877470945173844 25.018894376326156 25.6541539479407 24.4494807305593 48-49 24.866628777633714 25.09386335474678 25.45570195908881 24.583805908530696 50-51 24.766349165761042 25.223879233979595 25.394272032384922 24.615499567874433 52-53 24.918593600258216 25.215262894687378 25.32130871870345 24.544834786350954 54-55 24.935046261274753 24.95744467475644 25.414993288777815 24.692515775190994 56-57 24.902287712791956 25.09376062631501 25.348094834548274 24.65585682634476 58-59 25.041948049834918 25.037265940175924 25.323339519695242 24.59744649029392 60-61 25.068167259591483 24.979734955466714 25.422560631585313 24.529537153356493 62-63 24.857362856372838 25.05863819243091 25.44066445935213 24.643334491844122 64-65 24.93257038184325 24.98532189548127 25.348538565557327 24.733569157118147 66-67 24.9114489094339 25.083468724681595 25.282046393031642 24.72303597285286 68-69 24.952396520784554 25.035659001268872 25.259331394972158 24.752613082974417 70-71 24.90587843610336 24.95571018545348 25.39456500170617 24.743846376736993 72-73 25.092137178977225 24.93871223023375 25.224436718021455 24.74471387276757 74-75 24.872760856854303 25.170294477223198 25.112588369744326 24.844356296178173 76-77 24.89241699460965 24.92970033618284 25.370323159482616 24.807559509724893 78-79 24.88310952100407 24.88319259291011 25.43626872897658 24.797429157109242 80-81 24.83091253090775 25.094400665388505 25.293133663636013 24.781553140067736 82-83 24.96153306412706 25.045134814881244 25.184670355174582 24.808661765817114 84-85 24.94498018157329 25.088871142613794 25.25865085244393 24.70749782336899 86-87 24.87979600517334 25.000236859256237 25.262942862400063 24.85702427317036 88-89 24.835032512912385 24.878051548084535 25.2982630855962 24.988652853406883 90-91 24.89855221838578 24.94902259363867 25.189554826686795 24.962870361288754 92-93 24.977766600633664 25.070038945407664 25.240879821375355 24.711314632583317 94-95 24.91723561473789 24.885537909558757 25.285470296643364 24.91175617905999 96-97 24.84933134949 24.89215300964542 25.347716363536136 24.910799277328447 98-99 24.956890146046305 24.854920916145627 25.21271817488196 24.975470762926108 100-101 25.554636601424612 24.123199038546318 25.397991912723967 24.9241724473051 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 264.0 1 226.5 2 311.5 3 488.0 4 449.0 5 395.0 6 734.5 7 1695.5 8 2544.5 9 2375.5 10 1640.0 11 1145.0 12 1054.0 13 1116.5 14 1147.0 15 1183.0 16 1252.0 17 1302.5 18 1364.5 19 1408.5 20 1473.0 21 1513.0 22 1551.5 23 1754.5 24 1967.5 25 2243.0 26 2697.0 27 3332.5 28 4379.5 29 5950.0 30 8076.5 31 10818.5 32 14169.0 33 17990.0 34 22386.5 35 27794.5 36 34195.0 37 40953.0 38 48126.0 39 54994.5 40 62353.5 41 70315.0 42 78545.0 43 88224.5 44 98218.5 45 108097.0 46 115918.0 47 124345.0 48 134800.5 49 138672.0 50 136125.5 51 133701.0 52 134081.0 53 135034.5 54 134427.5 55 131002.5 56 123285.5 57 114016.0 58 105902.0 59 97546.0 60 85599.5 61 72520.0 62 59599.5 63 46024.5 64 34813.0 65 26757.0 66 20652.5 67 16156.0 68 12793.5 69 10137.0 70 8030.5 71 6357.5 72 4889.5 73 3803.5 74 3026.5 75 2435.0 76 1818.0 77 1193.5 78 794.5 79 487.0 80 288.5 81 170.5 82 98.0 83 52.5 84 26.0 85 15.5 86 7.5 87 3.0 88 2.5 89 2.5 90 1.0 91 1.0 92 1.0 93 0.0 94 0.5 95 0.5 96 0.5 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.3012784326747468 2 0.0 3 0.005412585090486468 4 0.054125850904864686 5 5.312966959986718E-4 6 0.058575460733853564 7 0.0690021583928275 8 0.09855553710775361 9 0.08666777353478333 10-11 0.09030383529802424 12-13 0.09065249875477337 14-15 0.06040179312634899 16-17 0.032525319608168686 18-19 0.035480657479661296 20-21 0.025917316951685206 22-23 0.0390004980906525 24-25 0.03126348995517184 26-27 0.01982400796945044 28-29 0.023709115058940727 30-31 0.003154574132492114 32-33 0.005412585090486468 34-35 0.007454756765731363 36-37 0.010775361115723062 38-39 0.01573966461896065 40-41 0.01982400796945044 42-43 0.0032541922629918643 44-45 0.013000166030217501 46-47 0.022696330732193258 48-49 0.0024738502407438156 50-51 0.007388344678731528 52-53 0.002191598870994521 54-55 0.00418396148098954 56-57 0.003586252697991034 58-59 0.0012286236094969285 60-61 0.0052133488294869666 62-63 0.0149593225967126 64-65 0.007039681221982401 66-67 0.03622779345840943 68-69 0.05781172173335548 70-71 0.012203220986219492 72-73 0.030134484476174665 74-75 0.047152581769882115 76-77 0.2928274946040179 78-79 0.06837124356632908 80-81 0.030815208367922963 82-83 0.026481819691183794 84-85 0.017914660468205213 86-87 0.11238585422546903 88-89 0.5031379711107422 90-91 0.12601693508218498 92-93 0.04612319442138469 94-95 0.008002656483479994 96-97 0.005761248547235597 98-99 0.009878797941225302 100-101 0.007521168852731197 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3011500.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.17462591299363 #Duplication Level Percentage of deduplicated Percentage of total 1 73.67215182492579 39.911612653206255 2 14.24961932856631 15.439355930552864 3 5.060604633556864 8.22469088749516 4 2.311915752745517 5.0098868418938185 5 1.2635305037097142 3.4225646184065095 6 0.7618242521809778 2.4762926324010355 7 0.5006939227447044 1.8987434173122584 8 0.35464079048098157 1.5370025726236425 9 0.2765167123059386 1.3482170503078597 >10 1.4325604616710428 13.79487145147632 >50 0.08112105934216923 2.9746684793611746 >100 0.03328708365529766 3.061937342188263 >500 0.0011655923274195214 0.3911034615764083 >1k 3.680817873128722E-4 0.5090526611984906 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4724 0.15686534949360784 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 9.961813049975096E-5 2 0.0 0.0 0.0 3.3206043499916987E-5 9.961813049975096E-5 3 0.0 0.0 0.0 3.3206043499916987E-5 9.961813049975096E-5 4 0.0 0.0 0.0 6.641208699983397E-5 9.961813049975096E-5 5 0.0 0.0 0.0 6.641208699983397E-5 9.961813049975096E-5 6 0.0 0.0 0.0 6.641208699983397E-5 1.3282417399966795E-4 7 0.0 0.0 0.0 1.3282417399966795E-4 1.3282417399966795E-4 8 0.0 0.0 0.0 1.3282417399966795E-4 1.3282417399966795E-4 9 0.0 0.0 0.0 1.3282417399966795E-4 1.3282417399966795E-4 10-11 0.0 0.0 0.0 1.3282417399966795E-4 1.3282417399966795E-4 12-13 0.0 0.0 0.0 1.6603021749958492E-4 5.312966959986718E-4 14-15 0.0 3.3206043499916987E-5 0.0 1.6603021749958492E-4 6.309148264984227E-4 16-17 1.6603021749958493E-5 3.3206043499916987E-5 0.0 1.992362609995019E-4 6.973269134982567E-4 18-19 3.3206043499916987E-5 3.3206043499916987E-5 0.0 2.324423044994189E-4 8.633571309978416E-4 20-21 3.3206043499916987E-5 3.3206043499916987E-5 0.0 2.324423044994189E-4 9.629752614975925E-4 22-23 3.3206043499916987E-5 3.3206043499916987E-5 0.0 2.822513697492944E-4 0.001045990370247385 24-25 3.3206043499916987E-5 3.3206043499916987E-5 0.0 3.3206043499916984E-4 0.0010957994354972606 26-27 3.3206043499916987E-5 3.3206043499916987E-5 0.0 3.984725219990038E-4 0.001112402457247219 28-29 3.3206043499916987E-5 3.3206043499916987E-5 0.0 7.803420222480492E-4 0.0011290054789971774 30-31 3.3206043499916987E-5 3.3206043499916987E-5 0.0 0.0031545741324921135 0.0011290054789971774 32-33 3.3206043499916987E-5 3.3206043499916987E-5 0.0 0.008284907853229289 0.0011954175659970115 34-35 3.3206043499916987E-5 3.3206043499916987E-5 0.0 0.01552382533621119 0.0013282417399966794 36-37 3.3206043499916987E-5 6.641208699983397E-5 0.0 0.025684874647185787 0.0013282417399966794 38-39 3.3206043499916987E-5 1.1622115224970946E-4 0.0 0.041158890918147104 0.0014444628922463888 40-41 3.3206043499916987E-5 1.3282417399966795E-4 0.0 0.057961148929105095 0.0014942719574962643 42-43 3.3206043499916987E-5 1.6603021749958492E-4 0.0 0.07458077370081355 0.0015606840444960983 44-45 3.3206043499916987E-5 1.6603021749958492E-4 0.0 0.09239581603851901 0.0016104931097459738 46-47 3.3206043499916987E-5 1.6603021749958492E-4 0.0 0.11150589407272124 0.0016603021749958492 48-49 3.3206043499916987E-5 1.6603021749958492E-4 0.0 0.13201062593392 0.0017765233272455587 50-51 3.3206043499916987E-5 1.6603021749958492E-4 0.0 0.1521999003818695 0.0018263323924954341 52-53 3.3206043499916987E-5 1.6603021749958492E-4 0.0 0.17220654159056947 0.0020421716752448945 54-55 4.980906524987548E-5 1.8263323924954343E-4 0.0 0.1936410426697659 0.002125186783994687 56-57 6.641208699983397E-5 1.9923626099950192E-4 0.0 0.21500913166196248 0.0021417898057446453 58-59 6.641208699983397E-5 1.9923626099950192E-4 0.0 0.23729038685040676 0.002158392827494604 60-61 6.641208699983397E-5 2.324423044994189E-4 0.0 0.26046820521334885 0.0021749958492445626 62-63 6.641208699983397E-5 2.324423044994189E-4 0.0 0.28475842603353807 0.002291217001494272 64-65 6.641208699983397E-5 2.324423044994189E-4 0.0 0.30833471691847913 0.002324423044994189 66-67 6.641208699983397E-5 2.324423044994189E-4 0.0 0.33504897891416235 0.0023410260667441475 68-69 6.641208699983397E-5 2.324423044994189E-4 0.0 0.36378880956334053 0.002357629088494106 70-71 6.641208699983397E-5 2.324423044994189E-4 0.0 0.3898721567325253 0.002457247218993857 72-73 6.641208699983397E-5 2.324423044994189E-4 0.0 0.4159721069234601 0.0026564834799933587 74-75 6.641208699983397E-5 2.324423044994189E-4 0.0 0.4440976257678898 0.0028391167192429023 76-77 6.641208699983397E-5 2.324423044994189E-4 0.0 0.4734849742653163 0.002905528806242736 78-79 6.641208699983397E-5 2.324423044994189E-4 0.0 0.5041175493939898 0.0029719408932425704 80-81 6.641208699983397E-5 2.324423044994189E-4 0.0 0.5368919143284078 0.0029885439149925285 82-83 6.641208699983397E-5 2.324423044994189E-4 0.0 0.5692512037190769 0.003021749958492446 84-85 6.641208699983397E-5 2.324423044994189E-4 0.0 0.6017101112402458 0.003021749958492446 86-87 6.641208699983397E-5 2.324423044994189E-4 0.0 0.6374896231114062 0.003171177154242072 88-89 6.641208699983397E-5 2.324423044994189E-4 0.0 0.6725219990038187 0.003337207371741657 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 7560 0.0 32.575806 1 TCAACGC 9260 0.0 25.749018 4 TATCAAC 9645 0.0 25.016247 2 CAACGCA 9545 0.0 24.917995 5 ATCAACG 9695 0.0 24.691269 3 GGTATCA 4975 0.0 23.937199 1 GTACATG 10895 0.0 23.522388 1 AACGCAG 10080 0.0 23.502048 6 TACATGG 11140 0.0 22.59703 2 GAGTACA 8380 0.0 22.282732 1 AGTACAT 8395 0.0 21.272955 2 ACATGGG 11660 0.0 20.774584 3 ACGCAGA 11750 0.0 20.162764 7 AGAGTAC 9880 0.0 18.813025 10-11 CGCAGAG 12680 0.0 18.609062 8 GTATAAC 410 1.8189894E-12 18.589277 1 CATGGGG 9615 0.0 17.882458 4 GCAGAGT 14005 0.0 16.88238 9 CGTATAC 200 2.763792E-4 16.62374 3 TACTTTT 5460 0.0 15.645664 14-15 >>END_MODULE