##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921442_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 6221348 Sequences flagged as poor quality 0 Sequence length 98 %GC 50 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.58031506998162 31.0 30.0 34.0 26.0 34.0 2 29.650553545630302 31.0 30.0 34.0 25.0 34.0 3 29.78310922327444 31.0 30.0 34.0 25.0 34.0 4 33.25707772656344 37.0 35.0 37.0 27.0 37.0 5 33.20845916351247 37.0 35.0 37.0 27.0 37.0 6 33.31075853657439 37.0 35.0 37.0 28.0 37.0 7 33.16901079958877 37.0 35.0 37.0 27.0 37.0 8 33.13587521546777 37.0 35.0 37.0 27.0 37.0 9 34.48189508125892 38.0 35.0 39.0 27.0 39.0 10-11 34.32229735420684 38.0 35.0 39.0 27.0 39.0 12-13 34.12910441595616 38.0 35.0 39.0 25.0 39.0 14-15 34.997819363263396 39.0 35.0 40.0 25.0 41.0 16-17 34.83103187605001 39.0 34.5 40.0 24.5 41.0 18-19 34.61532581041922 38.5 34.0 40.0 23.0 41.0 20-21 34.47199819074579 39.0 34.0 40.0 21.5 41.0 22-23 34.49189203047314 39.0 34.0 40.0 20.5 41.0 24-25 34.32033588219144 39.0 34.0 40.0 18.5 41.0 26-27 33.999112973587074 38.0 34.0 40.0 17.5 41.0 28-29 33.721261935516225 38.0 33.0 40.0 16.0 41.0 30-31 33.43447312383104 38.0 33.0 40.0 14.0 41.0 32-33 33.12111418618602 38.0 32.5 40.0 9.5 41.0 34-35 32.6556977683936 38.0 31.5 40.0 8.5 41.0 36-37 32.23457392192174 37.5 31.0 40.0 8.0 41.0 38-39 31.954641582499484 37.0 30.5 40.0 4.0 41.0 40-41 31.657127603213965 37.0 30.0 40.0 2.0 41.0 42-43 31.3155606309115 37.0 30.0 39.5 2.0 40.5 44-45 30.954552855747664 36.0 29.5 39.0 2.0 40.0 46-47 30.626415448870567 36.0 29.0 39.0 2.0 40.0 48-49 30.362958718914292 36.0 28.0 39.0 2.0 40.0 50-51 29.671666735247733 35.0 27.5 38.5 2.0 39.5 52-53 30.27631294696905 35.5 28.5 38.5 2.0 39.5 54-55 30.681432625212416 36.0 29.0 39.0 2.0 40.0 56-57 30.470300086090667 36.0 29.0 39.0 2.0 40.0 58-59 30.094617758080723 35.0 28.0 39.0 2.0 40.0 60-61 29.564255608270106 35.0 28.0 38.5 2.0 40.0 62-63 29.04519141189337 34.5 26.5 38.0 2.0 40.0 64-65 28.448719393289043 34.0 26.0 37.5 2.0 40.0 66-67 27.902464787374058 34.0 25.5 37.0 2.0 39.0 68-69 27.33044791900405 33.5 24.0 36.0 2.0 39.0 70-71 26.74980558875665 33.0 22.5 36.0 2.0 39.0 72-73 26.154429554495263 32.5 20.5 35.0 2.0 38.0 74-75 25.51277592894659 32.0 18.5 35.0 2.0 37.0 76-77 24.89037134717428 31.5 15.0 35.0 2.0 36.5 78-79 24.26857033234598 31.0 7.5 34.0 2.0 36.0 80-81 23.609890493185723 30.5 4.0 34.0 2.0 35.5 82-83 22.914228475886574 30.0 2.0 34.0 2.0 35.0 84-85 22.228103861092485 29.5 2.0 34.0 2.0 35.0 86-87 21.56389282515622 29.0 2.0 34.0 2.0 35.0 88-89 20.828973801176208 28.5 2.0 34.0 2.0 35.0 90-91 20.00982166565831 27.0 2.0 33.0 2.0 34.5 92-93 19.11835136050901 25.5 2.0 33.0 2.0 34.0 94-95 18.15741106268288 24.5 2.0 32.0 2.0 34.0 96-97 17.232042637704883 21.5 2.0 32.0 2.0 34.0 98 16.602169979882174 18.0 2.0 32.0 2.0 34.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 288562.0 3 47972.0 4 35748.0 5 30090.0 6 28630.0 7 29657.0 8 34149.0 9 38770.0 10 43007.0 11 46848.0 12 50113.0 13 52560.0 14 46436.0 15 47888.0 16 52233.0 17 58634.0 18 65055.0 19 67187.0 20 71830.0 21 78049.0 22 85202.0 23 93830.0 24 103356.0 25 115158.0 26 128382.0 27 144347.0 28 163556.0 29 188848.0 30 218917.0 31 258903.0 32 313149.0 33 389740.0 34 496896.0 35 639019.0 36 764981.0 37 667921.0 38 228138.0 39 7587.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.636470231307065 16.757147846349863 12.818564500193673 24.7878174221494 2 16.12345638909745 18.727652788393303 38.37670015696416 26.772190665545086 3 21.393395589812272 21.76180110219313 26.96757941432079 29.87722389367381 4 13.968608069812163 14.001028579258016 34.49138556830612 37.538977782623704 5 15.755079458770057 35.66129864949845 32.426254766641634 16.157367125089863 6 35.80372364721852 32.52785658682827 16.139771871924037 15.528647894029168 7 31.867502804752405 29.719971782832005 18.983136752764835 19.42938865965075 8 28.241499834170945 32.88562971875296 18.547839069775367 20.32503137730073 9 26.934565863830716 16.723927122004635 18.84225853754675 37.49924847661789 10-11 27.364829400544803 24.382648521476746 25.540284523994206 22.712237553984245 12-13 27.67484212964667 21.410913988286655 26.105454164911123 24.80878971715555 14-15 24.35787378068601 23.080984087146607 24.045174138566864 28.515967993600523 16-17 24.80035926089482 26.131769076973754 24.433494535610926 24.634377126520505 18-19 24.736130773574143 25.948262317153837 25.428363833090202 23.88724307618182 20-21 25.502184431699494 24.653659114120813 25.22366717815565 24.620489276024045 22-23 25.055182656826418 24.38982932090118 25.342754305389537 25.212233716882864 24-25 25.25875819549061 24.57235796104767 25.334981103506333 24.83390273995539 26-27 25.094233041611663 24.51268791009159 25.751360862419638 24.641718185877114 28-29 24.79324457931606 25.325443729869395 25.350338031640135 24.530973659174407 30-31 25.097774079216524 24.76664044991073 25.10193134211966 25.033654128753085 32-33 24.961598622783956 24.91236639709263 25.20941583198723 24.91661914813618 34-35 25.401439055997855 24.694302246935763 25.31782272595851 24.586435971107875 36-37 25.292599582326286 24.54790280322575 25.495251855698843 24.664245758749125 38-39 25.04928923226127 24.88137575279257 25.411386004565017 24.65794901038114 40-41 25.156978764688564 24.96975404970105 25.186754047357805 24.68651313825258 42-43 24.95488971133212 24.91986294647311 24.934532827696348 25.190714514498424 44-45 25.123727209389067 24.53407540312608 25.13719961107729 25.204997776407563 46-47 25.494886480604357 24.873378500580802 25.110892998462848 24.520842020351992 48-49 25.372238068592797 24.850205565843293 25.02990155079444 24.747654814769472 50-51 24.555193541248364 25.09122599007862 25.55023931173847 24.80334115693455 52-53 25.03045819651427 25.286522859307908 24.89531295781763 24.78770598636019 54-55 24.80969416770379 24.783804526420766 25.26450825923191 25.141993046643535 56-57 25.108445568421978 24.70233554256304 25.25740400229875 24.931814886716232 58-59 25.596754085455682 24.68032574141122 24.95302862600999 24.769891547123112 60-61 25.189141350161727 24.82645839439498 25.498317545541116 24.486082709902174 62-63 24.80622891340779 25.009440476774163 25.36142991539475 24.822900694423296 64-65 24.803214524303513 25.271778493448643 25.155279779095167 24.769727203152673 66-67 25.11810165906366 24.811473711532315 24.893429717431985 25.176994911972038 68-69 24.766389034549093 24.917102920322844 25.180640191941915 25.135867853186145 70-71 25.15629871846273 24.686292458279034 25.119088005717323 25.038320817540914 72-73 25.172518285872776 24.472782762249267 25.44995048534692 24.904748466531032 74-75 24.687451828285543 25.421437431853416 25.09100872679788 24.80010201306316 76-77 24.96923851315552 24.723219264262077 24.985438540470366 25.32210368211204 78-79 24.987160555806888 24.742664284552593 25.270608992816936 24.999566166823588 80-81 25.20289782198455 24.78802620562933 25.107553703000768 24.901522269385353 82-83 25.178600043026915 24.524784673699777 25.383353265908355 24.913262017364953 84-85 24.948033454205284 24.909329897464627 25.197258212925405 24.945378435404685 86-87 24.995024700566063 24.965092201619633 25.177646032099844 24.862237065714467 88-89 24.75954026952284 24.828324349265554 24.940480904123582 25.471654477088023 90-91 25.00843018971599 24.461884323753505 25.06847864494527 25.46120684158523 92-93 25.35924995442112 24.79431395088231 25.09532422422889 24.751111870467685 94-95 25.341768345024455 24.534403158593214 25.11525861038461 25.008569885997716 96-97 24.79225288908919 24.537298596681985 25.5974303280435 25.07301818618532 98 25.077380641087476 24.98456906698381 24.710621582516428 25.227428709412287 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 607.0 1 456.0 2 429.5 3 580.0 4 537.5 5 517.0 6 794.5 7 1499.5 8 2230.0 9 2262.5 10 1925.5 11 1870.0 12 2055.5 13 2430.5 14 2935.0 15 3452.0 16 3922.0 17 4039.0 18 3979.5 19 3883.5 20 3653.0 21 3437.0 22 3140.0 23 3031.5 24 3217.0 25 3624.0 26 4400.5 27 5714.5 28 7894.0 29 10995.0 30 15146.5 31 20847.5 32 28305.0 33 36713.5 34 46909.5 35 59358.0 36 72878.5 37 87626.5 38 103562.0 39 119713.0 40 137014.0 41 155707.5 42 174902.0 43 193136.5 44 211844.5 45 234798.0 46 274362.5 47 315268.5 48 323690.5 49 306744.5 50 295347.0 51 293566.0 52 292261.5 53 292079.5 54 288380.5 55 279067.0 56 263738.5 57 246256.0 58 226606.5 59 202908.5 60 178148.5 61 150892.0 62 122484.5 63 95053.0 64 71108.0 65 53893.0 66 41125.0 67 31211.0 68 23017.0 69 16780.0 70 12422.0 71 9463.5 72 7166.5 73 5052.5 74 3649.0 75 2625.5 76 1743.0 77 1093.0 78 659.0 79 403.0 80 245.0 81 139.5 82 84.5 83 55.0 84 43.5 85 33.0 86 28.5 87 22.5 88 17.5 89 13.0 90 11.0 91 11.5 92 9.5 93 8.5 94 8.5 95 9.5 96 8.0 97 4.5 98 3.0 99 1.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.44972568645894745 2 0.04389723899064961 3 0.051435798158212656 4 0.04921762936263974 5 0.05879754676960684 6 0.060887126069784234 7 0.039203722408712706 8 0.017472097686867864 9 0.010447896500886946 10-11 0.012585696861837659 12-13 0.009306664729251603 14-15 0.013534044390379706 16-17 0.012842875852628723 18-19 0.05161260871438152 20-21 0.07806989739201214 22-23 0.09408732641221805 24-25 0.06521094785245898 26-27 0.08000677666640735 28-29 0.08142929795922041 30-31 0.0532762353110612 32-33 0.029647915532132262 34-35 0.3760599792842323 36-37 0.5885541204253484 38-39 0.5406786439208995 40-41 0.5357279483481715 42-43 0.5110709126060783 44-45 0.4969180312691076 46-47 0.48795695080873147 48-49 0.4786663597664043 50-51 0.49310856746801496 52-53 0.5691772908379342 54-55 0.5391918278803887 56-57 0.4987745421088806 58-59 0.4791726809045242 60-61 0.4909145092028287 62-63 0.5022625321714844 64-65 0.5214062932984941 66-67 0.5446086603739254 68-69 0.5005667582009558 70-71 0.45390484505930223 72-73 0.43755790545714535 74-75 0.4189285023117177 76-77 0.43260720988441737 78-79 0.4270858984258717 80-81 0.424658771700281 82-83 0.4428381116118243 84-85 0.41044159561561255 86-87 0.4137527751220475 88-89 0.4392536794276739 90-91 0.42355772414595677 92-93 0.4186311391036155 94-95 0.4290308145437291 96-97 0.4229951451036013 98 0.41791586003547787 >>END_MODULE >>Sequence Length Distribution pass #Length Count 98 6221348.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.00450602791727 #Duplication Level Percentage of deduplicated Percentage of total 1 73.12221422055694 35.83317987545941 2 13.290357823841822 13.025748401832683 3 5.242684242944072 7.707454547574589 4 2.5631252656914922 5.024187501315431 5 1.4639901350870885 3.5871056699843322 6 0.9404073972152288 2.7650519979319004 7 0.613355071268225 2.104001360105215 8 0.4592948436567263 1.8006013547653892 9 0.32426862564903325 1.4301561438254249 >10 1.8079153438817583 16.082474423572847 >50 0.1227291762651633 4.117309326149365 >100 0.04774356712710308 3.8854306456791505 >500 9.901566786598987E-4 0.3314374820923941 >1k 5.940836593950157E-4 0.7263799414773221 >5k 2.310325341138269E-4 0.7725236917147741 >10k+ 9.90139431916401E-5 0.8069576365196637 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAGTAAGCAGTGGTATCAACGCAGAGTAAGCAGTGGTATCAACGCAGAGT 27166 0.4366577789893766 No Hit GCTTACTCTGCGTTGATACCACTGCTTACTCTGCGTTGATACCACTGCTT 11891 0.19113221121853335 No Hit GCGTTGATACCACTGCTTACTCTGCGTTGATACCACTGCTTACTCTGCGT 10836 0.1741744715132476 No Hit CTGCTTACTCTGCGTTGATACCACTGCTTACTCTGCGTTGATACCACTGC 9620 0.1546288682131268 No Hit GTATCAACGCAGAGTAAGCAGTGGTATCAACGCAGAGTAAGCAGTGGTAT 8667 0.1393106445741341 No Hit TGCTTACTCTGCGTTGATACCACTGCTTACTCTGCGTTGATACCACTGCT 6861 0.11028156598859283 No Hit ACGCAGAGTAAGCAGTGGTATCAACGCAGAGTAAGCAGTGGTATCAACGC 6559 0.1054273125374115 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.6073686924441455E-5 2 0.0 0.0 0.0 0.0 1.6073686924441455E-5 3 0.0 0.0 0.0 0.0 1.6073686924441455E-5 4 0.0 0.0 0.0 0.0 1.6073686924441455E-5 5 0.0 0.0 0.0 0.0 1.6073686924441455E-5 6 0.0 0.0 0.0 0.0 1.6073686924441455E-5 7 0.0 0.0 0.0 0.0 1.6073686924441455E-5 8 0.0 0.0 0.0 1.6073686924441455E-5 1.6073686924441455E-5 9 0.0 0.0 0.0 4.8221060773324366E-5 1.6073686924441455E-5 10-11 0.0 0.0 0.0 7.233159115998655E-5 1.6073686924441455E-5 12-13 0.0 0.0 0.0 8.036843462220728E-5 3.214737384888291E-5 14-15 0.0 1.6073686924441455E-5 0.0 8.840527808442801E-5 6.429474769776582E-5 16-17 0.0 1.6073686924441455E-5 0.0 1.6073686924441457E-4 6.429474769776582E-5 18-19 0.0 1.6073686924441455E-5 0.0 1.6073686924441457E-4 8.036843462220728E-5 20-21 0.0 1.6073686924441455E-5 0.0 2.1699477347995964E-4 8.036843462220728E-5 22-23 8.036843462220728E-6 1.6073686924441455E-5 0.0 3.375474254132706E-4 9.644212154664875E-5 24-25 1.6073686924441455E-5 3.214737384888291E-5 0.0 4.259527034976986E-4 1.125158084710902E-4 26-27 1.6073686924441455E-5 4.8221060773324366E-5 0.0 5.786527292798924E-4 1.2858949539553164E-4 28-29 1.6073686924441455E-5 4.8221060773324366E-5 0.0 0.0011573054585597847 1.3662633885775237E-4 30-31 1.6073686924441455E-5 4.8221060773324366E-5 0.0 0.0025557162209861916 1.446631823199731E-4 32-33 1.6073686924441455E-5 4.8221060773324366E-5 0.0 0.0064696589870876856 1.5270002578219384E-4 34-35 1.6073686924441455E-5 4.8221060773324366E-5 0.0 0.011122991351713487 1.9288424309329746E-4 36-37 1.6073686924441455E-5 4.8221060773324366E-5 0.0 0.017496208217254523 2.250316169421804E-4 38-39 1.6073686924441455E-5 5.62579042355451E-5 0.0 0.02758244676234154 2.250316169421804E-4 40-41 3.214737384888291E-5 6.429474769776582E-5 0.0 0.039187648721788274 2.250316169421804E-4 42-43 3.214737384888291E-5 8.036843462220728E-5 0.0 0.0505999664381417 2.330684604044011E-4 44-45 3.214737384888291E-5 1.125158084710902E-4 0.0 0.06272756322263277 2.4914214732884253E-4 46-47 3.214737384888291E-5 1.125158084710902E-4 0.0 0.07633393920417247 2.571789907910633E-4 48-49 3.214737384888291E-5 1.125158084710902E-4 0.0 0.08883123078792571 2.571789907910633E-4 50-51 3.214737384888291E-5 1.125158084710902E-4 0.0 0.10207594881366547 2.571789907910633E-4 52-53 3.214737384888291E-5 1.125158084710902E-4 0.0 0.1148464930751342 2.8128952117772543E-4 54-55 3.214737384888291E-5 1.125158084710902E-4 0.0 0.12847697958706056 3.214737384888291E-4 56-57 3.214737384888291E-5 1.125158084710902E-4 0.0 0.14498465605846192 3.4558426887549133E-4 58-59 3.214737384888291E-5 1.125158084710902E-4 0.0 0.15986085330703248 3.5362111233771203E-4 60-61 3.214737384888291E-5 1.125158084710902E-4 0.0 0.1752915927544963 3.6165795579993273E-4 62-63 3.214737384888291E-5 1.125158084710902E-4 0.0 0.19073840588888452 4.018421731110364E-4 64-65 4.0184217311103635E-5 1.125158084710902E-4 0.0 0.20549405048552177 4.0987901657325713E-4 66-67 5.62579042355451E-5 1.2858949539553164E-4 0.0 0.22216246382616756 4.179158600354778E-4 68-69 6.429474769776582E-5 1.2858949539553164E-4 0.0 0.2399319247211376 4.179158600354778E-4 70-71 6.429474769776582E-5 1.3662633885775237E-4 0.0 0.25708254866951663 4.179158600354778E-4 72-73 6.429474769776582E-5 1.446631823199731E-4 0.0 0.27420906208750906 5.143579815821266E-4 74-75 6.429474769776582E-5 1.446631823199731E-4 0.0 0.292123186164799 5.384685119687888E-4 76-77 6.429474769776582E-5 1.6073686924441457E-4 0.0 0.309964978650929 5.62579042355451E-4 78-79 6.429474769776582E-5 1.6073686924441457E-4 1.6073686924441455E-5 0.3307000347834585 5.786527292798924E-4 80-81 6.429474769776582E-5 1.6073686924441457E-4 2.4110530386662183E-5 0.3518128225587124 6.18836946590996E-4 82-83 6.429474769776582E-5 1.6073686924441457E-4 3.214737384888291E-5 0.37139057323268204 6.590211639020997E-4 84-85 6.429474769776582E-5 1.6073686924441457E-4 3.214737384888291E-5 0.3913219450189894 6.911685377509826E-4 86 6.429474769776582E-5 1.6073686924441457E-4 3.214737384888291E-5 0.40664820550144437 6.911685377509826E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTACATG 21380 0.0 26.093443 1 GTACCTG 6315 0.0 25.511215 1 TACATGG 21920 0.0 24.767864 2 ACATGGG 23130 0.0 22.97657 3 TACCTGG 6815 0.0 22.40556 2 GAGTACA 16450 0.0 20.51042 1 CATGGGG 17810 0.0 20.185038 4 AGTACAT 15545 0.0 20.117363 2 ACCTGGG 8775 0.0 16.930716 3 AGAGTAC 17325 0.0 16.518126 10-11 GTGTAGC 2930 0.0 16.181026 1 GTATAGG 1320 0.0 16.04059 1 ATGGGGG 8955 0.0 14.798226 5 GTATATG 2000 0.0 14.269152 1 GTCCTAG 2375 0.0 14.148022 1 GTATAAT 1370 0.0 14.11124 1 GTACACG 1510 0.0 14.022238 1 TAGACTG 2305 0.0 13.726366 5 GTCTTAG 2295 0.0 13.638377 1 GTACTAG 785 0.0 13.486357 1 >>END_MODULE