##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921441_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 5338845 Sequences flagged as poor quality 0 Sequence length 98 %GC 50 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.725734124141084 31.0 31.0 34.0 26.0 34.0 2 29.80445283577253 31.0 31.0 34.0 26.0 34.0 3 29.93262849923532 31.0 31.0 34.0 26.0 34.0 4 33.41769914653825 37.0 35.0 37.0 28.0 37.0 5 33.37556250462413 37.0 35.0 37.0 28.0 37.0 6 33.468613904318254 37.0 35.0 37.0 28.0 37.0 7 33.33300273748348 37.0 35.0 37.0 27.0 37.0 8 33.298551653026074 37.0 35.0 37.0 27.0 37.0 9 34.66966225840982 39.0 35.0 39.0 27.0 39.0 10-11 34.51232008046684 38.0 35.0 39.0 27.0 39.0 12-13 34.31636355803549 38.0 35.0 39.0 26.5 39.0 14-15 35.21721908015685 39.0 35.5 40.5 25.5 41.0 16-17 35.029078012191775 39.0 35.0 40.0 25.0 41.0 18-19 34.80999841726066 39.0 34.5 40.0 24.0 41.0 20-21 34.669115885552024 39.0 34.0 40.0 23.5 41.0 22-23 34.68895875418747 39.0 34.5 40.0 23.0 41.0 24-25 34.51874272431584 39.0 34.0 40.0 21.5 41.0 26-27 34.19907564276543 38.0 34.0 40.0 18.5 41.0 28-29 33.91526603600592 38.0 33.5 40.0 17.5 41.0 30-31 33.614350763133224 38.0 33.0 40.0 16.0 41.0 32-33 33.298352827250085 38.0 33.0 40.0 12.5 41.0 34-35 32.833372105764454 38.0 32.0 40.0 8.5 41.0 36-37 32.40362016503569 38.0 31.0 40.0 8.0 41.0 38-39 32.12398561861227 37.5 31.0 40.0 7.5 41.0 40-41 31.807576826073806 37.0 30.0 40.0 2.0 41.0 42-43 31.473816246772476 37.0 30.0 40.0 2.0 41.0 44-45 31.10616594038598 36.5 30.0 39.0 2.0 40.0 46-47 30.771307745401863 36.0 29.0 39.0 2.0 40.0 48-49 30.49982880192251 36.0 28.0 39.0 2.0 40.0 50-51 29.816099455968473 35.0 27.5 38.5 2.0 39.5 52-53 30.414102113846724 35.5 29.5 38.5 2.0 40.0 54-55 30.805971797270757 36.0 30.0 39.0 2.0 40.0 56-57 30.614640526181226 36.0 29.0 39.0 2.0 40.0 58-59 30.234856883839107 35.5 28.5 39.0 2.0 40.0 60-61 29.730830076542773 35.0 28.0 39.0 2.0 40.0 62-63 29.189242804389337 35.0 27.0 38.0 2.0 40.0 64-65 28.589687938121447 34.0 26.0 38.0 2.0 40.0 66-67 28.052807957526394 34.0 26.0 37.0 2.0 39.5 68-69 27.488165886067115 33.5 24.5 36.5 2.0 39.0 70-71 26.922763069540323 33.0 22.5 36.0 2.0 39.0 72-73 26.31620912388354 33.0 21.0 35.0 2.0 38.0 74-75 25.668914156526363 32.0 19.0 35.0 2.0 37.0 76-77 25.025909442960042 31.5 16.0 35.0 2.0 36.5 78-79 24.405212831614328 31.0 8.5 34.5 2.0 36.0 80-81 23.762199595605416 31.0 4.5 34.0 2.0 35.5 82-83 23.066041437801623 30.0 2.0 34.0 2.0 35.0 84-85 22.379454825903355 29.5 2.0 34.0 2.0 35.0 86-87 21.68218856325666 29.0 2.0 34.0 2.0 35.0 88-89 20.954615464580822 29.0 2.0 34.0 2.0 35.0 90-91 20.14295404717687 27.0 2.0 33.5 2.0 35.0 92-93 19.258733864721677 25.5 2.0 33.0 2.0 34.0 94-95 18.296483228113946 24.5 2.0 32.5 2.0 34.0 96-97 17.369385700465173 22.0 2.0 32.0 2.0 34.0 98 16.741138954212005 18.0 2.0 32.0 2.0 34.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 233675.0 3 39191.0 4 30029.0 5 25603.0 6 24131.0 7 25482.0 8 29090.0 9 33229.0 10 36616.0 11 40017.0 12 43471.0 13 45770.0 14 41108.0 15 41782.0 16 46135.0 17 52200.0 18 57848.0 19 58544.0 20 61911.0 21 66552.0 22 72836.0 23 79176.0 24 87870.0 25 97663.0 26 108521.0 27 121515.0 28 137414.0 29 157022.0 30 181712.0 31 214622.0 32 258724.0 33 321632.0 34 413788.0 35 539929.0 36 667617.0 37 614333.0 38 223775.0 39 8312.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.841334838303254 16.532873786740343 12.805024145205882 24.820767229750523 2 16.285409623471736 18.169850003373238 39.01662631275159 26.52811406040344 3 20.770358592199557 22.020266991724192 26.83456307557194 30.374811340504316 4 13.922573385599277 14.150937031231376 33.953054356732316 37.97343522643703 5 15.854102662096542 35.05482705434873 32.232831155764394 16.85823912779034 6 35.90987028254145 32.119634403990936 16.65636419252344 15.314131120944175 7 32.49806845113111 29.2640100772226 18.5963697187856 19.64155175286069 8 28.80190703289572 33.322379834371105 18.18112840773095 19.69458472500223 9 27.315910440116976 16.415633958512586 18.379498211833354 37.88895738953709 10-11 27.277240367954185 24.564773913982602 25.443632790286774 22.714352927776435 12-13 27.27980659436341 21.450015880790012 26.314005414361237 24.95617211048534 14-15 24.228743585254726 23.079838317555403 23.738053682895327 28.953364414294548 16-17 24.924436393235172 26.149789647066978 24.18748223251832 24.73829172717953 18-19 24.91438972316845 25.373017544859184 25.63370908398503 24.078883647987332 20-21 25.34212927617658 24.66872036559778 25.67402052105463 24.315129837171014 22-23 25.14308498061919 24.322149845622906 25.572475859067694 24.96228931469021 24-25 24.829234969476772 24.59737147016173 25.65553687505922 24.91785668530228 26-27 24.90169720367222 24.77806940984952 25.590906453532064 24.729326932946194 28-29 24.884583423750914 24.82520075046201 25.57230695827137 24.71790886751571 30-31 25.029616950360285 24.832826582517857 25.42170770183148 24.715848765290378 32-33 24.88435886553925 24.79364285265932 25.448197812060553 24.873800469740875 34-35 25.009746973642265 24.848096730602677 25.511831312000016 24.630324983755045 36-37 25.084795829287472 24.77274830856049 25.4175227308244 24.72493313132764 38-39 25.052285976524747 24.84886029712735 25.38257715673 24.716276569617904 40-41 25.12519624172949 24.740371226332535 25.442790861187742 24.69164167075023 42-43 25.03847510687425 24.648101803691915 25.4202596700078 24.893163419426035 44-45 24.975083079157987 24.808976550835276 25.399214503780637 24.816725866226104 46-47 25.150869913406908 24.740142591345286 25.355645139878895 24.753342355368904 48-49 25.140839548021855 24.83969713860581 25.182769220457352 24.83669409291499 50-51 24.927678253744183 25.068475571044036 25.15083173892031 24.853014436291474 52-53 24.996211905622552 25.00049942537812 25.180066406613673 24.823222262385656 54-55 24.92435993498506 24.888713629982686 25.322206234975848 24.864720200056407 56-57 24.923319858871253 24.94938366812334 25.33632012534734 24.79097634765807 58-59 24.99135558460301 24.87223069221692 25.30228153258213 24.834132190597945 60-61 25.030390101474836 24.88250463207193 25.303253715708333 24.783851550744902 62-63 24.891718128236132 24.98354714434077 25.305956258615442 24.818778468807658 64-65 24.944229802410657 24.812854561986153 25.312332884836025 24.930582750767165 66-67 24.93384500668639 24.92334084953666 25.278937186553357 24.863876957223585 68-69 24.903247567205984 24.904735341841647 25.28306324887795 24.908953842074418 70-71 24.84725721781936 24.762198035432164 25.323138779825182 25.06740596692329 72-73 24.99073621191708 24.826763869476284 25.173471371460305 25.00902854714633 74-75 24.80816426905518 24.98562260990295 25.192188521475583 25.01402459956628 76-77 24.95369054396992 24.80066962998258 25.20196963499765 25.043670191049856 78-79 24.92391037941551 24.740828623941947 25.3083547809986 25.026906215643947 80-81 24.856314417895224 24.953182053859198 25.197769071356806 24.992734456888773 82-83 25.03338961552609 24.813878712580365 25.168227859977133 24.98450381191641 84-85 25.013179169349222 24.85723977584312 25.107465260988942 25.022115793818717 86-87 24.973791393793622 24.828562225590435 25.254842477433883 24.94280390318206 88-89 24.955216369603722 24.613019279097646 25.23586390368346 25.195900447615173 90-91 24.934225040913834 24.721035615146985 25.19956402480185 25.145175319137326 92-93 24.98509814900948 24.801092275572856 25.234007980769086 24.979801594648578 94-95 25.121587054599882 24.61753154968959 25.178745272215657 25.08213612349487 96-97 25.083076810757415 24.56707434618378 25.2170872965793 25.1327615464795 98 25.02424832086846 24.663124734115165 25.101184409350413 25.211442535665963 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 644.0 1 489.0 2 640.0 3 916.5 4 692.5 5 537.5 6 872.5 7 1779.5 8 2539.0 9 2474.5 10 2038.0 11 1805.0 12 1993.5 13 2334.0 14 2729.0 15 3209.5 16 3582.5 17 3863.5 18 3989.0 19 3947.0 20 3805.0 21 3619.5 22 3518.0 23 3592.0 24 3890.5 25 4467.5 26 5498.0 27 7068.5 28 9151.0 29 11974.0 30 15571.0 31 20322.5 32 27058.5 33 35021.5 34 44111.0 35 54696.5 36 66525.0 37 79711.5 38 93304.5 39 106246.0 40 120117.0 41 135048.0 42 150430.5 43 166546.5 44 182119.5 45 197335.5 46 213268.5 47 229121.0 48 238979.5 49 243901.5 50 246565.0 51 248260.0 52 252510.5 53 255791.5 54 253962.0 55 246372.5 56 233364.0 57 218044.0 58 200768.5 59 179850.0 60 157184.0 61 133133.0 62 108605.5 63 84008.0 64 62566.0 65 47181.5 66 35837.5 67 27005.0 68 20273.5 69 15232.5 70 11313.0 71 8486.0 72 6467.0 73 4840.5 74 3619.5 75 2635.5 76 1782.0 77 1125.5 78 687.5 79 414.0 80 248.0 81 146.5 82 93.5 83 58.5 84 43.5 85 38.0 86 21.0 87 15.0 88 14.0 89 12.5 90 12.5 91 10.0 92 9.0 93 6.5 94 4.5 95 4.5 96 3.5 97 4.5 98 4.0 99 1.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.4829134391427359 2 0.05104100231417095 3 0.05945106104410224 4 0.057259575807126824 5 0.06769254398657387 6 0.06662489733266277 7 0.04596499804733046 8 0.021146896004660184 9 0.01303652756354605 10-11 0.015799297413579154 12-13 0.011884593015905125 14-15 0.015930411914936656 16-17 0.014844034617974487 18-19 0.056884962946105386 20-21 0.08555221213577094 22-23 0.10256900134766977 24-25 0.07135438470305844 26-27 0.08781861994495063 28-29 0.08986026003751747 30-31 0.0602752093383494 32-33 0.03483899607499375 34-35 0.4085153249438783 36-37 0.637666012030692 38-39 0.585435613882778 40-41 0.5802378604361056 42-43 0.5538276537340941 44-45 0.5375413596011872 46-47 0.5271552180293678 48-49 0.516413194239578 50-51 0.5314726312526399 52-53 0.6133723679934517 54-55 0.5833096858964814 56-57 0.539442519870871 58-59 0.517199881247723 60-61 0.5303862539556777 62-63 0.5427484783693852 64-65 0.5620316753904637 66-67 0.588563631272307 68-69 0.5413343148190292 70-71 0.4883734215921234 72-73 0.470963288876152 74-75 0.4509683274191328 76-77 0.4657468047864285 78-79 0.45988411351144304 80-81 0.4565875203344544 82-83 0.47653565518384594 84-85 0.4427736710842889 86-87 0.44573311268635823 88-89 0.4727707959305805 90-91 0.4555760656096965 92-93 0.4508278475962498 94-95 0.461682255244346 96-97 0.45581956396936035 98 0.45035958151997296 >>END_MODULE >>Sequence Length Distribution pass #Length Count 98 5338845.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.91016972325983 #Duplication Level Percentage of deduplicated Percentage of total 1 75.45968056951502 42.18963547904556 2 13.447469536609477 15.037006082804044 3 4.6539453897623995 7.80608629873195 4 2.0773588348778067 4.645819401365259 5 1.151595985025477 3.219296348769951 6 0.7064798374882924 2.369964457201887 7 0.4688679794843745 1.8350141817541303 8 0.3336495008280771 1.4923520175502971 9 0.24996510025333726 1.257803206205017 >10 1.33172810698458 13.485254161553934 >50 0.08693775158620068 3.3109566535088035 >100 0.031579419973999566 2.8764547377840044 >500 6.070814089587149E-4 0.23504822315841642 >1k 1.011796515243478E-4 0.13901064606260063 >5k 3.372655050796721E-5 0.10029810450425403 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 1.8730643051071907E-5 0.0 0.0 0.0 8 0.0 1.8730643051071907E-5 0.0 0.0 0.0 9 0.0 1.8730643051071907E-5 0.0 0.0 0.0 10-11 0.0 1.8730643051071907E-5 0.0 3.746128610214381E-5 0.0 12-13 1.8730643051071907E-5 3.746128610214381E-5 0.0 5.619192915321572E-5 7.492257220428763E-5 14-15 1.8730643051071907E-5 3.746128610214381E-5 0.0 5.619192915321572E-5 1.030185367808955E-4 16-17 1.8730643051071907E-5 3.746128610214381E-5 0.0 5.619192915321572E-5 1.1238385830643145E-4 18-19 1.8730643051071907E-5 3.746128610214381E-5 0.0 5.619192915321572E-5 1.4984514440857528E-4 20-21 1.8730643051071907E-5 3.746128610214381E-5 0.0 1.030185367808955E-4 2.06037073561791E-4 22-23 1.8730643051071907E-5 3.746128610214381E-5 0.0 1.217491798319674E-4 2.1540239508732696E-4 24-25 1.8730643051071907E-5 4.682660762767977E-5 0.0 1.6857578745964718E-4 2.247677166128629E-4 26-27 1.8730643051071907E-5 5.619192915321572E-5 0.0 2.1540239508732693E-4 2.247677166128629E-4 28-29 1.8730643051071907E-5 5.619192915321572E-5 0.0 3.6524753949590224E-4 2.247677166128629E-4 30-31 1.8730643051071907E-5 5.619192915321572E-5 0.0 0.001198761155268602 2.3413303813839883E-4 32-33 1.8730643051071907E-5 5.619192915321572E-5 0.0 0.0027534045285075703 2.622290027150067E-4 34-35 1.8730643051071907E-5 5.619192915321572E-5 9.365321525535953E-6 0.004336143866323147 2.622290027150067E-4 36-37 1.8730643051071907E-5 7.492257220428763E-5 1.8730643051071907E-5 0.0072487588607648284 2.622290027150067E-4 38-39 2.8095964576607858E-5 9.365321525535954E-5 1.8730643051071907E-5 0.011772209157598693 2.622290027150067E-4 40-41 5.619192915321572E-5 9.365321525535954E-5 1.8730643051071907E-5 0.016660906993928463 2.622290027150067E-4 42-43 5.619192915321572E-5 9.365321525535954E-5 1.8730643051071907E-5 0.021521508865681622 2.622290027150067E-4 44-45 5.619192915321572E-5 9.365321525535954E-5 1.8730643051071907E-5 0.027093875173375515 2.8095964576607864E-4 46-47 5.619192915321572E-5 9.365321525535954E-5 1.8730643051071907E-5 0.03301275837751424 2.996902888171505E-4 48-49 5.619192915321572E-5 9.365321525535954E-5 1.8730643051071907E-5 0.03903466011843386 3.1842093186822243E-4 50-51 5.619192915321572E-5 1.030185367808955E-4 1.8730643051071907E-5 0.04568403840156439 3.1842093186822243E-4 52-53 9.365321525535954E-5 1.1238385830643145E-4 1.8730643051071907E-5 0.05176213207163721 3.558822179703662E-4 54-55 9.365321525535954E-5 1.4047982288303932E-4 1.8730643051071907E-5 0.05842087567629328 3.9334350407251007E-4 56-57 9.365321525535954E-5 1.5921046593411121E-4 1.8730643051071907E-5 0.06559471196485382 4.0270882559804603E-4 58-59 9.365321525535954E-5 1.9667175203625503E-4 1.8730643051071907E-5 0.07341475543867634 4.3080479017465386E-4 60-61 9.365321525535954E-5 2.06037073561791E-4 1.8730643051071907E-5 0.08163750773809691 4.5890075475126175E-4 62-63 9.365321525535954E-5 2.06037073561791E-4 1.8730643051071907E-5 0.0892889754244598 5.057273623789415E-4 64-65 9.365321525535954E-5 2.06037073561791E-4 1.8730643051071907E-5 0.09743680515167608 5.150926839044775E-4 66-67 9.365321525535954E-5 2.06037073561791E-4 1.8730643051071907E-5 0.10546288569906037 5.431886484810853E-4 68-69 9.365321525535954E-5 2.06037073561791E-4 1.8730643051071907E-5 0.11435994114831953 5.900152561087651E-4 70-71 9.365321525535954E-5 2.247677166128629E-4 1.8730643051071907E-5 0.12421225939318337 6.649378283130527E-4 72-73 1.030185367808955E-4 2.434983596639348E-4 1.8730643051071907E-5 0.1332872559514277 7.585910435684123E-4 74-75 1.1238385830643145E-4 2.434983596639348E-4 1.8730643051071907E-5 0.1419876396486506 8.054176511960921E-4 76-77 1.1238385830643145E-4 2.622290027150067E-4 1.8730643051071907E-5 0.1520178990024996 8.428789372982358E-4 78-79 1.1238385830643145E-4 2.8095964576607864E-4 1.8730643051071907E-5 0.1617016414599038 8.616095803493077E-4 80-81 1.3111450135750336E-4 2.8095964576607864E-4 1.8730643051071907E-5 0.1720222257810444 9.178015095025235E-4 82-83 1.3111450135750336E-4 2.8095964576607864E-4 1.8730643051071907E-5 0.18361649382965792 0.0010489160108600269 84-85 1.3111450135750336E-4 2.8095964576607864E-4 1.8730643051071907E-5 0.1949672635186075 0.0010489160108600269 86 1.3111450135750336E-4 2.8095964576607864E-4 1.8730643051071907E-5 0.203957972183122 0.0010676466539110987 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTACCTG 8065 0.0 45.431686 1 GTATCAA 8190 0.0 41.92809 1 TACCTGG 8560 0.0 41.557667 2 GGTATCA 4635 0.0 34.957718 1 ACCTGGG 10355 0.0 33.777973 3 TCAACGC 10265 0.0 33.00233 4 CAACGCA 10615 0.0 31.8278 5 TATCAAC 10765 0.0 31.640114 2 ATCAACG 10785 0.0 31.283607 3 AACGCAG 11395 0.0 29.962284 6 TATAACG 365 0.0 26.374826 2 GTACATG 15390 0.0 25.961592 1 ACGCAGA 13680 0.0 24.784775 7 TACATGG 15955 0.0 24.364767 2 CGCAGAG 14735 0.0 23.067448 8 CCTGGGG 11015 0.0 22.431765 4 ACATGGG 16685 0.0 22.419353 3 CATGGGG 12860 0.0 19.890804 4 GCAGAGT 16870 0.0 19.741001 9 GTGTAGC 3010 0.0 18.35122 1 >>END_MODULE