##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921441_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 5338845 Sequences flagged as poor quality 0 Sequence length 101 %GC 49 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.8802703581018 33.0 31.0 34.0 30.0 34.0 2 31.993078090860475 34.0 31.0 34.0 30.0 34.0 3 32.11847056807231 34.0 31.0 34.0 30.0 34.0 4 35.677826571102926 37.0 35.0 37.0 35.0 37.0 5 35.475830821085836 37.0 35.0 37.0 33.0 37.0 6 35.515515059905276 37.0 35.0 37.0 33.0 37.0 7 35.44851348934086 37.0 35.0 37.0 33.0 37.0 8 35.398314429431835 37.0 35.0 37.0 33.0 37.0 9 37.01396594207174 39.0 37.0 39.0 33.0 39.0 10-11 36.91972083849596 39.0 37.0 39.0 33.0 39.0 12-13 36.79062709256402 39.0 37.0 39.0 33.0 39.0 14-15 38.0620945166979 40.0 38.0 41.0 33.0 41.0 16-17 37.95033963338513 40.0 38.0 41.0 33.0 41.0 18-19 37.83851029576622 40.0 38.0 41.0 33.0 41.0 20-21 37.71661595345061 40.0 38.0 41.0 32.0 41.0 22-23 37.67753774458708 40.0 38.0 41.0 32.5 41.0 24-25 37.73024661701173 40.0 38.0 41.0 32.5 41.0 26-27 37.610777799318015 40.0 38.0 41.0 32.0 41.0 28-29 37.46319166411462 40.0 37.5 41.0 32.0 41.0 30-31 37.31427237539205 40.0 37.0 41.0 32.0 41.0 32-33 37.14192582852658 40.0 37.0 41.0 31.0 41.0 34-35 36.982327357321665 40.0 37.0 41.0 31.0 41.0 36-37 36.87223650433755 40.0 36.5 41.0 30.5 41.0 38-39 36.83320774437168 40.0 36.5 41.0 31.0 41.0 40-41 36.65603946171878 39.5 36.0 41.0 30.0 41.0 42-43 36.39792492570959 39.0 36.0 41.0 30.0 41.0 44-45 36.173064211453976 39.0 35.0 40.0 30.0 41.0 46-47 35.871931382162245 39.0 35.0 40.0 28.5 41.0 48-49 35.507025770555245 38.0 35.0 40.0 28.0 41.0 50-51 35.199318672859015 38.0 34.5 40.0 27.0 41.0 52-53 34.854581093850825 38.0 34.0 40.0 26.0 41.0 54-55 34.494469683985955 38.0 34.0 40.0 26.0 41.0 56-57 34.075936649219074 37.0 33.0 40.0 24.5 41.0 58-59 33.64451655742019 37.0 33.0 39.5 23.0 41.0 60-61 33.182754603289666 36.0 32.0 39.0 22.5 40.0 62-63 32.70480328610402 35.5 31.5 39.0 21.5 40.0 64-65 32.14294383897641 35.0 31.0 38.0 19.5 40.0 66-67 31.573085938999913 35.0 30.5 38.0 18.0 40.0 68-69 31.028470296477984 34.5 30.0 37.0 14.0 39.0 70-71 30.438034443779507 34.0 29.0 36.5 9.5 39.0 72-73 29.854626609313435 34.0 29.0 36.0 7.5 38.5 74-75 29.299638311282685 34.0 28.0 35.0 7.0 37.5 76-77 28.110408337383834 31.5 27.0 34.0 4.5 36.0 78-79 29.039237138369817 33.5 29.0 35.0 2.0 36.0 80-81 29.0484321046968 34.0 29.0 35.0 2.0 36.0 82-83 28.674841187560233 34.0 29.0 35.0 2.0 36.0 84-85 28.13432231128643 33.0 27.5 35.0 2.0 35.5 86-87 27.554190091677135 33.0 26.5 35.0 2.0 35.0 88-89 26.964598616367397 32.5 25.5 34.5 2.0 35.0 90-91 26.420857975835595 32.0 24.5 34.0 2.0 35.0 92-93 25.902975081689018 32.0 24.0 34.0 2.0 35.0 94-95 25.31779982374465 32.0 21.5 34.0 2.0 35.0 96-97 24.44132204624783 31.0 15.5 34.0 2.0 35.0 98-99 23.312883966475894 31.0 2.0 34.0 2.0 35.0 100-101 19.753999132771227 25.5 2.0 32.0 2.0 34.5 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 34663.0 3 17978.0 4 11145.0 5 8511.0 6 7562.0 7 7909.0 8 9022.0 9 11037.0 10 12956.0 11 15475.0 12 18619.0 13 21737.0 14 24529.0 15 28371.0 16 32103.0 17 37913.0 18 38983.0 19 35846.0 20 36167.0 21 38551.0 22 41535.0 23 45712.0 24 51705.0 25 60223.0 26 71070.0 27 85688.0 28 103461.0 29 125177.0 30 152762.0 31 189614.0 32 239083.0 33 313513.0 34 436610.0 35 632745.0 36 923584.0 37 1023868.0 38 383644.0 39 9774.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.06492249791671 17.109551371963967 13.26401252133785 24.56151360878147 2 16.544945582799276 18.44460740103899 38.655046175717786 26.355400840443956 3 20.773250459068407 22.162659414231896 27.13535882262698 29.928731304072713 4 14.19697369525843 14.491391434466047 33.848088018328156 37.46354685194736 5 15.867601504601577 35.05694701939866 32.321643238901764 16.753808237097996 6 35.969206495994406 32.30039822611604 16.45222832880166 15.278166949087895 7 32.444944804218615 29.348593806585704 18.558592704394595 19.647868684801082 8 28.78770264863087 33.48047324274935 18.109646545462184 19.622177563157596 9 27.174920949290932 16.45621473745941 18.40678840582101 37.96207590742865 10-11 27.211924458953003 24.666791470364107 25.491620794120866 22.629663276562027 12-13 27.2107478205928 21.456550361308896 26.40794228056994 24.924759537528363 14-15 24.126612069856606 23.089757489365166 23.83973656784556 28.94389387293267 16-17 24.807778535390014 26.212618347244852 24.383500067360657 24.59610305000447 18-19 24.817212424833176 25.416420264143504 25.762086465362366 24.004280845660954 20-21 25.196832469186216 24.660751177060273 25.886154788426115 24.256261565327396 22-23 25.00712533258579 24.286853053999057 25.821605657392272 24.884415956022877 24-25 24.680583443748873 24.556516440634507 25.900164988597137 24.862735127019484 26-27 24.77391758133005 24.72972260297744 25.858174586276267 24.638185229416244 28-29 24.72969586716009 24.861273027291066 25.77922184371957 24.629809261829276 30-31 24.860328262883783 24.830536246001703 25.658081864266595 24.65105362684792 32-33 24.737463849035425 24.7345510733672 25.711183213495875 24.8168018641015 34-35 24.82625234912781 24.8454153314161 25.771925856304794 24.556406463151298 36-37 24.870451228265196 24.858790082612426 25.66181684770478 24.608941841417597 38-39 24.87458990865003 24.82435562091519 25.652682776046216 24.64837169438857 40-41 24.936045281907525 24.7729712888981 25.68716546132358 24.603817967870796 42-43 24.85501920152668 24.74231255237759 25.649079409392435 24.753588836703294 44-45 24.77140846517641 24.805812288506175 25.670647412889625 24.752131833427796 46-47 24.843956073603106 24.82128636719735 25.63059488588285 24.704162673316695 48-49 24.906041928493806 24.923471315826962 25.410538869641012 24.759947886038216 50-51 24.794141274294006 25.095606283532213 25.32832449537369 24.781927946800096 52-53 24.899942926212603 25.0492675842803 25.285223770642418 24.765565718864675 54-55 24.87722212799244 24.88618514445114 25.408559484037447 24.828033243518977 56-57 24.86046082113735 25.03003571693486 25.398013053501977 24.71149040842581 58-59 24.932786578949955 24.959824604040907 25.36811095798617 24.73927785902297 60-61 24.997838826771872 24.90765491772041 25.390380938742467 24.704125316765243 62-63 24.791208770622593 25.045187402322668 25.392233770868465 24.771370056186274 64-65 24.899261857729073 24.87160411799674 25.41251757643272 24.816616447841465 66-67 24.84247718164173 25.02626824688695 25.32165310211717 24.80960146935415 68-69 24.83864861420357 24.988389222499606 25.372013434391143 24.80094872890568 70-71 24.784512170209368 24.87865476959978 25.42709090750712 24.909742152683727 72-73 24.97246167258779 24.910977051799783 25.21309765758865 24.90346361802377 74-75 24.73416498669689 25.12404290915326 25.224339798815908 24.917452305333942 76-77 24.868278373660765 24.970542472245384 25.27117224285948 24.89000691123437 78-79 24.81396071381877 24.911199096878015 25.420746968857006 24.85409322044621 80-81 24.736902901705726 25.106114322883023 25.332119304473512 24.82486347093774 82-83 24.96402939027627 25.003187447088614 25.22257561275567 24.810207549879447 84-85 24.87193953400931 25.056528327485587 25.194328273736954 24.87720386476815 86-87 24.82361936945067 25.087394498621446 25.308376023017033 24.78061010891085 88-89 24.794075916233076 24.889669993316698 25.340583319690264 24.97567077075996 90-91 24.79943465103055 24.979022597454428 25.2999665411836 24.921576210331423 92-93 24.883849887129376 25.091750718395385 25.300916495227497 24.723482899247742 94-95 24.96442513900023 24.925705603589694 25.232558390024106 24.877310867385965 96-97 24.860813796751614 24.915866384241962 25.296673317683588 24.926646501322836 98-99 24.815780967590957 24.935819665459565 25.289201378309507 24.95919798863997 100-101 25.418114423507582 24.310766590408306 25.38256090600403 24.888558080080085 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 224.0 1 191.5 2 467.5 3 744.0 4 507.5 5 334.0 6 614.5 7 1513.5 8 2289.5 9 2187.5 10 1582.0 11 1084.0 12 1005.0 13 1071.5 14 1167.0 15 1306.0 16 1460.0 17 1659.0 18 1873.5 19 2000.5 20 2160.0 21 2354.0 22 2601.5 23 2941.0 24 3421.0 25 4128.0 26 4933.5 27 6192.5 28 7983.0 29 10372.0 30 13922.5 31 18286.5 32 23839.5 33 31125.0 34 38919.5 35 47750.5 36 59031.0 37 71691.0 38 84297.0 39 96054.5 40 108959.0 41 122680.5 42 136899.5 43 152227.0 44 168237.5 45 184210.5 46 199084.5 47 213175.5 48 227518.0 49 239185.0 50 243431.5 51 246512.0 52 250701.0 53 252879.5 54 252020.0 55 244912.0 56 231212.5 57 214625.0 58 197154.5 59 176830.5 60 155022.0 61 132015.0 62 107894.5 63 83260.0 64 61213.0 65 45684.0 66 34435.0 67 26216.5 68 19973.5 69 15023.5 70 11311.0 71 8421.0 72 6133.0 73 4517.5 74 3390.0 75 2483.5 76 1732.0 77 1068.0 78 636.0 79 355.5 80 185.0 81 104.0 82 62.5 83 29.0 84 17.5 85 14.0 86 8.5 87 3.5 88 1.0 89 1.0 90 1.0 91 1.5 92 1.5 93 0.5 94 0.0 95 0.0 96 0.0 97 0.5 98 0.5 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.313363658244433 2 0.0 3 0.005918883204138723 4 0.06048124641191119 5 4.3080479017465386E-4 6 0.06432102823738094 7 0.07524099313615586 8 0.10487287044295161 9 0.09228587831263128 10-11 0.09619121738877978 12-13 0.09576041259860513 14-15 0.06423674034365111 16-17 0.035625683083138765 18-19 0.03837908761164634 20-21 0.02812406054118447 22-23 0.042181408151013934 24-25 0.03389309860091462 26-27 0.021249914541441078 28-29 0.02420935614351044 30-31 0.003118652068003473 32-33 0.005516174378540677 34-35 0.00800734990433324 36-37 0.011322673724372968 38-39 0.016061526416294162 40-41 0.020304017067361946 42-43 0.003877243111571885 44-45 0.014525613686106265 46-47 0.02482746736419581 48-49 0.0030062682096970413 50-51 0.007763851544669307 52-53 0.0026597513132522108 54-55 0.004504719653782794 56-57 0.0037648592532654535 58-59 0.0012643184059473538 60-61 0.005797134024306756 62-63 0.014937687833229846 64-65 0.007033356465677501 66-67 0.03893164158165296 68-69 0.06153016242277122 70-71 0.012483973593539427 72-73 0.03255385762276297 74-75 0.05033860319975575 76-77 0.3062741098496023 78-79 0.07525035845768138 80-81 0.03361213895514854 82-83 0.02812406054118447 84-85 0.01937685023633389 86-87 0.11748795853784855 88-89 0.5215828517216738 90-91 0.1295598579842644 92-93 0.04958001215618734 94-95 0.008513077266712183 96-97 0.005862691274985507 98-99 0.010610909288432235 100-101 0.00775448622314377 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 5338845.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.69483696903932 #Duplication Level Percentage of deduplicated Percentage of total 1 70.17699985557917 34.874345667993026 2 15.785989053076738 15.68964304775376 3 5.831066493867807 8.693216963051654 4 2.5877439560464532 5.143900560533814 5 1.48603411168369 3.6924111455276076 6 0.9182670023856726 2.7379877386562668 7 0.5870273441507726 2.042055971475855 8 0.43585424864591793 1.7327764662977616 9 0.30689944624969806 1.3726186152540472 >10 1.714725291080623 15.42784447215248 >50 0.12143575230951205 4.1205856398339815 >100 0.04701335581766725 3.900197600060136 >500 7.175084039437101E-4 0.25207221079902736 >1k 1.888172518814362E-4 0.20868331428470555 >5k 3.776345037310227E-5 0.11166058632594361 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5950 0.11144732615387784 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.8730643051071907E-5 2 0.0 0.0 0.0 0.0 1.8730643051071907E-5 3 0.0 0.0 0.0 0.0 1.8730643051071907E-5 4 0.0 0.0 0.0 0.0 1.8730643051071907E-5 5 0.0 0.0 0.0 0.0 1.8730643051071907E-5 6 0.0 0.0 0.0 0.0 3.746128610214381E-5 7 0.0 0.0 0.0 0.0 3.746128610214381E-5 8 0.0 0.0 0.0 0.0 3.746128610214381E-5 9 0.0 0.0 0.0 0.0 9.365321525535954E-5 10-11 0.0 0.0 9.365321525535953E-6 4.682660762767977E-5 1.3111450135750336E-4 12-13 0.0 9.365321525535953E-6 1.8730643051071907E-5 7.492257220428763E-5 3.1842093186822243E-4 14-15 0.0 1.8730643051071907E-5 1.8730643051071907E-5 7.492257220428763E-5 3.3715157491929435E-4 16-17 0.0 2.8095964576607858E-5 1.8730643051071907E-5 7.492257220428763E-5 3.558822179703663E-4 18-19 0.0 3.746128610214381E-5 1.8730643051071907E-5 8.428789372982357E-5 4.3080479017465386E-4 20-21 0.0 3.746128610214381E-5 1.8730643051071907E-5 1.6857578745964715E-4 5.150926839044775E-4 22-23 9.365321525535953E-6 3.746128610214381E-5 1.8730643051071907E-5 1.9667175203625503E-4 6.181112206853729E-4 24-25 1.8730643051071907E-5 3.746128610214381E-5 1.8730643051071907E-5 2.06037073561791E-4 6.181112206853729E-4 26-27 1.8730643051071907E-5 3.746128610214381E-5 2.8095964576607858E-5 2.434983596639348E-4 6.555725067875168E-4 28-29 1.8730643051071907E-5 3.746128610214381E-5 3.746128610214381E-5 3.839781825469741E-4 6.649378283130527E-4 30-31 1.8730643051071907E-5 3.746128610214381E-5 3.746128610214381E-5 0.0011238385830643145 6.836684713641247E-4 32-33 1.8730643051071907E-5 3.746128610214381E-5 3.746128610214381E-5 0.002594194062573459 7.492257220428763E-4 34-35 1.8730643051071907E-5 4.682660762767977E-5 6.555725067875168E-5 0.004111376149710284 8.24148294247164E-4 36-37 1.8730643051071907E-5 7.492257220428763E-5 7.492257220428763E-5 0.007117644359407325 8.428789372982358E-4 38-39 1.8730643051071907E-5 9.365321525535954E-5 7.492257220428763E-5 0.011603633370139046 8.428789372982358E-4 40-41 3.746128610214381E-5 9.365321525535954E-5 7.492257220428763E-5 0.016614080386300783 8.428789372982358E-4 42-43 3.746128610214381E-5 9.365321525535954E-5 7.492257220428763E-5 0.02134356775669644 8.428789372982358E-4 44-45 5.619192915321572E-5 9.365321525535954E-5 7.492257220428763E-5 0.026953395350492473 8.616095803493077E-4 46-47 6.555725067875168E-5 9.365321525535954E-5 7.492257220428763E-5 0.032535126979711906 9.365321525535954E-4 48-49 7.492257220428763E-5 1.1238385830643145E-4 7.492257220428763E-5 0.03825733843181437 0.001011454724757883 50-51 7.492257220428763E-5 1.3111450135750336E-4 7.492257220428763E-5 0.04471941028443418 0.001030185367808955 52-53 7.492257220428763E-5 1.3111450135750336E-4 7.492257220428763E-5 0.050638293488572905 0.0011332039045898505 54-55 7.492257220428763E-5 1.3111450135750336E-4 7.492257220428763E-5 0.05692242423220753 0.0011612998691664584 56-57 7.492257220428763E-5 1.3111450135750336E-4 7.492257220428763E-5 0.06348751462160823 0.0011893958337430661 58-59 7.492257220428763E-5 1.3111450135750336E-4 7.492257220428763E-5 0.07070817751779646 0.001217491798319674 60-61 7.492257220428763E-5 1.3111450135750336E-4 7.492257220428763E-5 0.07845329841941469 0.001217491798319674 62-63 7.492257220428763E-5 1.3111450135750336E-4 7.492257220428763E-5 0.08543046295593898 0.0013111450135750336 64-65 8.428789372982357E-5 1.3111450135750336E-4 7.492257220428763E-5 0.09303510403467416 0.0013111450135750336 66-67 9.365321525535954E-5 1.3111450135750336E-4 7.492257220428763E-5 0.10042434271832204 0.0013205103351005695 68-69 9.365321525535954E-5 1.4984514440857525E-4 7.492257220428763E-5 0.10893741998503421 0.0013486062996771774 70-71 9.365321525535954E-5 1.5921046593411121E-4 7.492257220428763E-5 0.11828401086751911 0.0013486062996771774 72-73 9.365321525535954E-5 1.6857578745964718E-4 7.492257220428763E-5 0.1266753389543993 0.0014235288718814649 74-75 9.365321525535954E-5 1.6857578745964718E-4 7.492257220428763E-5 0.1349823791475497 0.0014703554795091446 76-77 9.365321525535954E-5 1.6857578745964718E-4 7.492257220428763E-5 0.14445071920986655 0.0015171820871368246 78-79 9.365321525535954E-5 1.6857578745964718E-4 7.492257220428763E-5 0.15343206255285552 0.0015265474086623605 80-81 9.365321525535954E-5 1.6857578745964718E-4 7.492257220428763E-5 0.1630596130811065 0.0015452780517134323 82-83 9.365321525535954E-5 1.6857578745964718E-4 7.492257220428763E-5 0.17388592476462605 0.001629565945443256 84-85 9.365321525535954E-5 1.6857578745964718E-4 7.492257220428763E-5 0.18456239130373706 0.0016576619100198637 86-87 9.365321525535954E-5 2.06037073561791E-4 7.492257220428763E-5 0.1960817367801463 0.0017700457683262954 88-89 9.365321525535954E-5 2.247677166128629E-4 7.492257220428763E-5 0.20762917822113208 0.001863698983581655 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 8420 0.0 44.698616 1 GTACCTG 8415 0.0 43.706116 1 TACCTGG 8860 0.0 40.908073 2 GGTATCA 4375 0.0 40.834976 1 TCAACGC 10735 0.0 34.56078 4 CAACGCA 11050 0.0 33.556675 5 ACCTGGG 10745 0.0 32.627247 3 TATCAAC 11650 0.0 32.171352 2 ATCAACG 11545 0.0 32.135685 3 AACGCAG 12095 0.0 31.168577 6 ACGCAGA 14640 0.0 25.426912 7 GTACATG 16190 0.0 25.394695 1 TACATGG 16425 0.0 24.322535 2 CGCAGAG 15565 0.0 23.854826 8 ACATGGG 16850 0.0 22.751186 3 CCTGGGG 11150 0.0 22.580603 4 TATCACG 490 0.0 20.358297 2 GCAGAGT 18015 0.0 20.135454 9 TATAACG 530 0.0 19.7181 2 GAGTACA 12125 0.0 19.56711 1 >>END_MODULE