##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921439_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4190038 Sequences flagged as poor quality 0 Sequence length 98 %GC 49 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.795486580312637 31.0 31.0 34.0 28.0 34.0 2 30.90380206575692 33.0 31.0 34.0 27.0 34.0 3 31.04350843596168 33.0 31.0 34.0 28.0 34.0 4 34.54882748080089 37.0 35.0 37.0 32.0 37.0 5 34.5558467488839 37.0 35.0 37.0 32.0 37.0 6 34.6529057731696 37.0 35.0 37.0 32.0 37.0 7 34.55418876869374 37.0 35.0 37.0 32.0 37.0 8 34.53887625840147 37.0 35.0 37.0 32.0 37.0 9 36.051287363026304 39.0 37.0 39.0 32.0 39.0 10-11 35.94540252379572 39.0 37.0 39.0 31.5 39.0 12-13 35.808636699714896 39.0 37.0 39.0 31.0 39.0 14-15 36.91743547433221 40.0 37.0 41.0 31.0 41.0 16-17 36.792698300110885 40.0 37.0 41.0 31.0 41.0 18-19 36.62670589145015 40.0 37.0 41.0 30.0 41.0 20-21 36.519892779015365 40.0 37.0 41.0 30.0 41.0 22-23 36.57238550103842 40.0 37.0 41.0 30.0 41.0 24-25 36.463985410156184 40.0 37.0 41.0 30.0 41.0 26-27 36.230831200098905 40.0 36.5 41.0 29.0 41.0 28-29 36.0269337652785 39.5 36.0 41.0 28.5 41.0 30-31 35.7929685840558 39.0 36.0 40.5 27.5 41.0 32-33 35.54311476411431 39.0 35.0 40.0 27.0 41.0 34-35 35.151710437948296 39.0 35.0 40.0 25.5 41.0 36-37 34.801254427764135 38.0 35.0 40.0 24.0 41.0 38-39 34.59760913862834 38.0 34.0 40.0 24.0 41.0 40-41 34.3576437731591 38.0 34.0 40.0 23.0 41.0 42-43 34.08639682981395 38.0 33.5 40.0 21.5 41.0 44-45 33.790638056265834 38.0 33.0 40.0 19.5 41.0 46-47 33.52602267568933 38.0 33.0 40.0 18.0 41.0 48-49 33.338211849152685 38.0 33.0 40.0 16.5 41.0 50-51 32.54051991891243 37.0 32.0 39.0 15.0 40.5 52-53 32.981967705304825 37.5 32.5 39.0 18.0 40.0 54-55 33.41642152171412 38.0 33.0 40.0 17.5 41.0 56-57 33.27851286790239 37.5 33.0 40.0 15.0 41.0 58-59 32.96392276155968 37.0 33.0 40.0 12.5 41.0 60-61 32.53186868472315 36.5 32.0 39.5 8.0 41.0 62-63 32.064029490901994 36.0 31.5 39.0 7.0 40.5 64-65 31.546588598957815 35.0 31.0 39.0 2.0 40.0 66-67 31.077645119208945 35.0 31.0 38.0 2.0 40.0 68-69 30.575943463997223 35.0 30.0 37.5 2.0 40.0 70-71 30.083362370460602 34.5 29.5 37.0 2.0 39.0 72-73 29.555358089831167 34.0 29.0 36.0 2.0 39.0 74-75 28.981057809022257 34.0 28.5 36.0 2.0 38.5 76-77 28.42927188249844 34.0 27.5 35.0 2.0 37.0 78-79 27.89918671381978 33.0 26.5 35.0 2.0 37.0 80-81 27.362178934892714 33.0 26.0 35.0 2.0 36.0 82-83 26.771268064871965 32.5 25.0 35.0 2.0 36.0 84-85 26.197718254583847 32.0 24.5 34.5 2.0 35.0 86-87 25.616659443184048 32.0 22.5 34.0 2.0 35.0 88-89 25.01058737414792 31.0 19.5 34.0 2.0 35.0 90-91 24.31687099257811 31.0 16.5 34.0 2.0 35.0 92-93 23.550889156613856 31.0 4.5 34.0 2.0 35.0 94-95 22.69169563617323 30.0 2.0 34.0 2.0 35.0 96-97 21.819075268529787 29.5 2.0 34.0 2.0 35.0 98 21.203083599719143 29.0 2.0 34.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 103655.0 3 18343.0 4 14126.0 5 12348.0 6 11632.0 7 11902.0 8 13387.0 9 15358.0 10 17224.0 11 19170.0 12 21820.0 13 26413.0 14 21465.0 15 20593.0 16 23325.0 17 26719.0 18 30999.0 19 29674.0 20 30238.0 21 32735.0 22 36008.0 23 39987.0 24 44514.0 25 51037.0 26 58245.0 27 67467.0 28 78363.0 29 92067.0 30 111372.0 31 136818.0 32 173222.0 33 228431.0 34 317863.0 35 466091.0 36 666451.0 37 756161.0 38 349257.0 39 15558.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.38887019205974 16.877327825191497 12.968032739893578 24.76576924285518 2 16.203826194599312 18.52191288716365 38.739886010768515 26.53437490746852 3 20.472252339171508 21.859492092907736 27.579870945555456 30.0883846223653 4 13.965540957486441 14.365520515519655 34.30536955063972 37.36356897635418 5 15.70745163601624 35.59625029854311 32.57291616909482 16.12338189634583 6 35.61531520816526 32.76329760937507 16.285377059955014 15.336010122504662 7 31.77926096219042 30.129924025533995 18.77322417028137 19.31759084199422 8 28.404731587538713 33.46259928890595 18.531510098499943 19.601159025055395 9 27.1164140827649 16.373671568443747 18.727021055116527 37.782893293674825 10-11 27.03869673505846 24.81450335068391 25.666520420863275 22.480279493394352 12-13 26.962913951229666 21.817660598361655 26.455308340691058 24.764117109717617 14-15 24.08272177473256 23.44652896333895 23.983194312361793 28.487554949566707 16-17 24.59170160058701 26.557835629400156 24.517035865809824 24.333426904203005 18-19 24.54643264765558 25.753840169156216 26.069187222253465 23.630539960934744 20-21 24.997339545956343 24.987509899815244 26.101424988154857 23.913725566073555 22-23 24.913417265705785 24.588242236701525 25.945875756643268 24.55246474094943 24-25 24.565773625490188 24.83566117314146 26.08512109949799 24.51344410187037 26-27 24.52653801019418 25.094581319032415 25.984335482252753 24.39454518852065 28-29 24.564934598800058 25.18542513138946 25.942497874226593 24.307142395583885 30-31 24.692096426163264 25.16053852632087 25.74057757450613 24.406787473009743 32-33 24.581111357289927 25.200503096123068 25.696579939567343 24.52180560701966 34-35 24.697249944932747 25.110523993383783 25.838574209925717 24.353651851757753 36-37 24.74110711157177 25.03648358322846 25.789424493999007 24.43298481120076 38-39 24.67049566548145 25.18190665986931 25.69892475700353 24.44867291764571 40-41 24.79214567517373 25.09546153558937 25.742336874379525 24.370055914857375 42-43 24.737943806779242 25.001770366111714 25.71821052593676 24.542075301172282 44-45 24.60851907893845 25.14037799184139 25.708466193057827 24.542636736162336 46-47 24.725646372071722 25.05483352794101 25.72094734961382 24.498572750373445 48-49 24.788297564480157 25.215649735111 25.464497579549484 24.531555120859355 50-51 24.614115987735037 25.44496371760921 25.43217221443119 24.508748080224564 52-53 24.722652809825814 25.298670734333378 25.44676458002586 24.531911875814945 54-55 24.65351904206013 25.205208767436304 25.60477860553248 24.536493584971083 56-57 24.63238409043069 25.33714576203331 25.530011355200315 24.50045879233568 58-59 24.71636208229981 25.247500043792577 25.474525558427334 24.56161231548028 60-61 24.806596792320654 25.21727036946462 25.5735618565076 24.40257098170712 62-63 24.542157863654186 25.400927271263146 25.513796919360665 24.543117945722003 64-65 24.67279356514817 25.181127846731993 25.588767528830413 24.55731105928942 66-67 24.694915602231685 25.26683665928367 25.46380861026173 24.574439128222917 68-69 24.570772700346875 25.294408212131366 25.544256759675914 24.59056232784584 70-71 24.52877373822909 25.134378197231953 25.617916613192055 24.7189314513469 72-73 24.662610412523346 25.242638925265343 25.46172509764079 24.63302556457052 74-75 24.524712207569046 25.413642607559545 25.39930289325318 24.662342291618234 76-77 24.672226156816762 25.21757055348913 25.370584043858752 24.73961924583536 78-79 24.633792847672716 25.2050331982493 25.526853512462665 24.634320441615316 80-81 24.6205069132436 25.369127388022576 25.411213683633598 24.599152015100227 82-83 24.788444157892616 25.22597138191538 25.3863652499621 24.5992192102299 84-85 24.697913148748977 25.323492574893358 25.28295896994531 24.695635306412353 86-87 24.705043828756434 25.285011302621935 25.44709048151987 24.562854387101762 88-89 24.65091474218809 25.10518878576314 25.408657758114423 24.835238713934352 90-91 24.601713992811902 25.14341725443411 25.520867367890958 24.734001384863028 92-93 24.745287559069617 25.218036343267176 25.441126290707288 24.59554980695592 94-95 24.82942892444175 25.122871129085794 25.350255263061968 24.69744468341049 96-97 24.793356125300104 25.043653694637925 25.416312303261613 24.74667787680036 98 24.659631941855015 25.237988473154584 25.26920951066659 24.833170074323814 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 1062.0 1 777.0 2 702.0 3 978.0 4 832.0 5 741.0 6 1310.5 7 2627.0 8 3792.5 9 3695.5 10 2796.0 11 2216.5 12 2242.5 13 2544.0 14 2923.5 15 3214.5 16 3462.0 17 3575.5 18 3612.5 19 3547.5 20 3315.5 21 3062.0 22 2846.0 23 2769.5 24 2862.0 25 3191.0 26 3748.5 27 4714.0 28 6167.5 29 8330.5 30 11564.5 31 16037.0 32 22024.0 33 28550.0 34 35855.5 35 45088.0 36 55744.0 37 67234.0 38 79263.0 39 90719.0 40 102508.0 41 115753.0 42 129583.0 43 143035.5 44 155282.5 45 167402.5 46 179467.5 47 189928.5 48 195230.5 49 196313.0 50 196755.0 51 196366.0 52 196159.0 53 195753.0 54 191646.0 55 183180.0 56 170793.5 57 157542.0 58 144130.5 59 128275.5 60 111858.0 61 94560.0 62 76688.5 63 58679.5 64 42896.5 65 32261.5 66 24661.0 67 18654.0 68 13967.0 69 10353.0 70 7716.5 71 5795.0 72 4388.0 73 3188.5 74 2319.0 75 1668.0 76 1096.5 77 665.5 78 391.0 79 228.0 80 128.5 81 89.0 82 65.0 83 32.5 84 21.0 85 18.0 86 11.0 87 12.0 88 11.0 89 9.0 90 9.5 91 6.5 92 7.5 93 8.0 94 6.5 95 4.5 96 2.0 97 3.5 98 2.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.5054608096633013 2 0.05427158417179033 3 0.06343617886043039 4 0.06143142377229037 5 0.07250530902106377 6 0.06997549902888708 7 0.0489733028674203 8 0.02386613200166681 9 0.01443900986100842 10-11 0.01775640220924011 12-13 0.013484364580941747 14-15 0.017708669945236774 16-17 0.016706292401166768 18-19 0.05798276769804952 20-21 0.0888416763762047 22-23 0.10610882287941065 24-25 0.07419980439318212 26-27 0.09129988797237638 28-29 0.09342397372052473 30-31 0.06318558447441287 32-33 0.03756529177062356 34-35 0.42641618047378094 36-37 0.6656741537904907 38-39 0.6128106714067988 40-41 0.6062594181723412 42-43 0.5783479767963918 44-45 0.5613194916132025 46-47 0.5514866452285159 48-49 0.5401382994617233 50-51 0.5539209906926859 52-53 0.6396004045786696 54-55 0.6100064008966029 56-57 0.5647920138194451 58-59 0.5409258818177782 60-61 0.5542909157387117 62-63 0.5662836470695493 64-65 0.5840519823447902 66-67 0.6143023046569029 68-69 0.5659614542875268 70-71 0.5105681619116581 72-73 0.49340841300245963 74-75 0.47258521283100535 76-77 0.4885635882061212 78-79 0.48124861874761043 80-81 0.4781460215873937 82-83 0.4994226782668797 84-85 0.46358768106637693 86-87 0.4664754830385786 88-89 0.4951864398365838 90-91 0.4761412664992537 92-93 0.47128450863691446 94-95 0.48262092133770623 96-97 0.47735843923133875 98 0.47190502806895784 >>END_MODULE >>Sequence Length Distribution pass #Length Count 98 4190038.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.27562948095766 #Duplication Level Percentage of deduplicated Percentage of total 1 71.91222571374611 36.87344640849042 2 14.65515271935049 15.029043616485296 3 5.539068557950036 8.520576811412056 4 2.4811367106031277 5.088873866579522 5 1.388371800838342 3.559481902079839 6 0.8650773392184063 2.661443107088144 7 0.607145994912 2.1792255153168587 8 0.424898031538271 1.7429531225875718 9 0.3115537195731235 1.4377601779421103 >10 1.670413722764462 15.492752086110158 >50 0.10675370156977355 3.733996671936241 >100 0.03722147438989358 3.036788513158694 >500 7.4705797524098E-4 0.2529384256126338 >1k 1.8676445663139764E-4 0.23591621720746397 >5k 4.669111415784858E-5 0.1548035579930434 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6466 0.1543184095227776 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.386613200166681E-5 2 0.0 0.0 0.0 0.0 2.386613200166681E-5 3 0.0 0.0 0.0 0.0 2.386613200166681E-5 4 0.0 0.0 0.0 0.0 2.386613200166681E-5 5 0.0 0.0 0.0 0.0 2.386613200166681E-5 6 0.0 0.0 0.0 0.0 4.773226400333362E-5 7 0.0 0.0 0.0 0.0 4.773226400333362E-5 8 0.0 0.0 0.0 0.0 4.773226400333362E-5 9 0.0 0.0 0.0 0.0 4.773226400333362E-5 10-11 0.0 0.0 0.0 0.0 4.773226400333362E-5 12-13 2.386613200166681E-5 0.0 0.0 0.0 9.546452800666724E-5 14-15 2.386613200166681E-5 1.1933066000833406E-5 0.0 4.773226400333362E-5 1.1933066000833405E-4 16-17 2.386613200166681E-5 2.386613200166681E-5 0.0 7.159839600500043E-5 1.4319679201000085E-4 18-19 2.386613200166681E-5 2.386613200166681E-5 0.0 7.159839600500043E-5 1.4319679201000085E-4 20-21 2.386613200166681E-5 2.386613200166681E-5 0.0 8.353146200583384E-5 1.5512985801083425E-4 22-23 2.386613200166681E-5 2.386613200166681E-5 0.0 1.3126372600916745E-4 2.505943860175015E-4 24-25 2.386613200166681E-5 2.386613200166681E-5 0.0 3.3412584802333537E-4 2.625274520183349E-4 26-27 2.386613200166681E-5 2.386613200166681E-5 0.0 6.085863660425038E-4 2.863935840200017E-4 28-29 2.386613200166681E-5 2.386613200166681E-5 0.0 0.001264904996088341 2.9832665002083513E-4 30-31 4.773226400333362E-5 2.386613200166681E-5 0.0 0.004689694938327528 3.22192782022502E-4 32-33 7.159839600500043E-5 2.386613200166681E-5 0.0 0.011944999066834237 4.057242440283358E-4 34-35 7.159839600500043E-5 2.386613200166681E-5 0.0 0.020978330029465128 4.295903760300026E-4 36-37 7.159839600500043E-5 3.579919800250022E-5 0.0 0.034426895412404374 4.295903760300026E-4 38-39 7.159839600500043E-5 4.773226400333362E-5 0.0 0.055094965725847836 4.295903760300026E-4 40-41 7.159839600500043E-5 4.773226400333362E-5 0.0 0.0778393895234363 4.295903760300026E-4 42-43 7.159839600500043E-5 4.773226400333362E-5 0.0 0.09924730992893144 4.295903760300026E-4 44-45 7.159839600500043E-5 4.773226400333362E-5 0.0 0.12258838702656158 4.4152344203083596E-4 46-47 7.159839600500043E-5 4.773226400333362E-5 0.0 0.1461800585102092 4.534565080316694E-4 48-49 7.159839600500043E-5 4.773226400333362E-5 0.0 0.16936600574982852 4.773226400333362E-4 50-51 7.159839600500043E-5 4.773226400333362E-5 0.0 0.19298154336547785 4.773226400333362E-4 52-53 7.159839600500043E-5 4.773226400333362E-5 0.0 0.21699087215915464 5.250549040366698E-4 54-55 7.159839600500043E-5 5.9665330004167024E-5 0.0 0.24227703901492065 5.727871680400035E-4 56-57 7.159839600500043E-5 7.159839600500043E-5 0.0 0.26867298100876413 6.682516960466707E-4 58-59 7.159839600500043E-5 7.159839600500043E-5 0.0 0.29407847852453844 6.801847620475041E-4 60-61 7.159839600500043E-5 7.159839600500043E-5 0.0 0.31889925580627193 6.921178280483375E-4 62-63 7.159839600500043E-5 7.159839600500043E-5 0.0 0.34447181624605794 7.159839600500043E-4 64-65 7.159839600500043E-5 7.159839600500043E-5 0.0 0.37077229371189474 7.63716224053338E-4 66-67 7.159839600500043E-5 7.159839600500043E-5 0.0 0.39939971904789406 7.875823560550047E-4 68-69 9.546452800666724E-5 7.159839600500043E-5 0.0 0.42768108546986927 8.114484880566716E-4 70-71 9.546452800666724E-5 7.159839600500043E-5 0.0 0.4572154238219319 8.711138180608387E-4 72-73 9.546452800666724E-5 7.159839600500043E-5 0.0 0.4872748170780313 0.0010859090060758398 74-75 9.546452800666724E-5 7.159839600500043E-5 0.0 0.5175132063241432 0.0011694404680816738 76-77 9.546452800666724E-5 7.159839600500043E-5 0.0 0.5483124496722942 0.0011694404680816738 78-79 1.1933066000833405E-4 7.159839600500043E-5 0.0 0.5819517627286435 0.0011694404680816738 80-81 1.1933066000833405E-4 7.159839600500043E-5 0.0 0.6159729338970195 0.0011694404680816738 82-83 1.1933066000833405E-4 7.159839600500043E-5 0.0 0.6508055535534523 0.0011694404680816738 84-85 1.1933066000833405E-4 7.159839600500043E-5 0.0 0.6864854208959441 0.0011694404680816738 86 1.4319679201000085E-4 7.159839600500043E-5 0.0 0.7131677564738076 0.0011694404680816738 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 7850 0.0 40.929916 1 GGTATCA 4640 0.0 34.722034 1 TCAACGC 9505 0.0 32.933792 4 CAACGCA 9870 0.0 31.715876 5 ATCAACG 10055 0.0 31.13234 3 TATCAAC 10290 0.0 30.777676 2 AACGCAG 10660 0.0 29.573357 6 GTACATG 14590 0.0 26.565128 1 GTACCTG 4040 0.0 25.066654 1 TACATGG 15120 0.0 24.947166 2 ACGCAGA 12780 0.0 24.37466 7 TCGCGTA 175 2.115994E-7 23.554377 9 ACATGGG 15665 0.0 23.37704 3 CGCAGAG 13570 0.0 22.849735 8 TACCTGG 4300 0.0 22.17012 2 CATGGGG 11265 0.0 21.48206 4 GAGTACA 11075 0.0 21.031094 1 AGTACAT 10565 0.0 20.389261 2 GTATAGG 1025 0.0 19.759863 1 GCAGAGT 15340 0.0 19.615854 9 >>END_MODULE