##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921438_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4387398 Sequences flagged as poor quality 0 Sequence length 98 %GC 48 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.8373808348365 31.0 31.0 34.0 26.0 34.0 2 29.92787957691552 31.0 31.0 34.0 26.0 34.0 3 30.054897914435845 31.0 31.0 34.0 26.0 34.0 4 33.53554247870834 37.0 35.0 37.0 28.0 37.0 5 33.50605119480841 37.0 35.0 37.0 28.0 37.0 6 33.59918293257188 37.0 35.0 37.0 29.0 37.0 7 33.470557036311725 37.0 35.0 37.0 28.0 37.0 8 33.44271866833144 37.0 35.0 37.0 28.0 37.0 9 34.834085259645924 39.0 35.0 39.0 28.0 39.0 10-11 34.68631601236086 39.0 35.0 39.0 27.0 39.0 12-13 34.4983628109417 38.0 35.0 39.0 27.0 39.0 14-15 35.43490150654215 39.0 36.0 41.0 27.0 41.0 16-17 35.274930949961686 39.0 36.0 41.0 26.0 41.0 18-19 35.088974718044724 39.0 35.0 40.0 25.0 41.0 20-21 34.96253348795801 39.0 35.0 40.0 25.0 41.0 22-23 34.992848836599734 39.0 35.0 40.0 24.5 41.0 24-25 34.84307737752536 39.0 35.0 40.5 23.5 41.0 26-27 34.543729905515754 39.0 34.0 40.0 21.0 41.0 28-29 34.28097781418508 38.5 34.0 40.0 18.5 41.0 30-31 33.993005307473815 38.0 34.0 40.0 17.5 41.0 32-33 33.678445288072794 38.0 33.0 40.0 16.0 41.0 34-35 33.2332105498521 38.0 33.0 40.0 12.0 41.0 36-37 32.82323361135689 38.0 32.0 40.0 9.0 41.0 38-39 32.55684257502966 38.0 31.5 40.0 8.0 41.0 40-41 32.265043198725074 38.0 31.0 40.0 7.5 41.0 42-43 31.943415550629325 37.0 30.5 40.0 2.0 41.0 44-45 31.59105898302365 37.0 30.0 40.0 2.0 41.0 46-47 31.251669668445853 37.0 30.0 40.0 2.0 41.0 48-49 30.987062377290595 36.5 29.5 39.0 2.0 40.0 50-51 30.27948376235755 35.5 28.5 38.5 2.0 39.5 52-53 30.830365287124625 36.5 30.0 39.0 2.0 40.0 54-55 31.24140321894663 37.0 30.0 39.5 2.0 40.5 56-57 31.082034271793898 36.5 30.0 40.0 2.0 41.0 58-59 30.738674836429247 36.0 29.5 39.0 2.0 41.0 60-61 30.27517824915816 35.5 29.0 39.0 2.0 40.0 62-63 29.777627194979804 35.0 28.0 39.0 2.0 40.0 64-65 29.22401193144547 35.0 27.5 38.0 2.0 40.0 66-67 28.728765660193126 34.0 26.0 38.0 2.0 40.0 68-69 28.204409538409784 34.0 26.0 37.0 2.0 39.5 70-71 27.669503085883704 34.0 25.5 36.5 2.0 39.0 72-73 27.097110861608634 33.5 24.0 36.0 2.0 39.0 74-75 26.48380646114166 33.0 22.0 35.5 2.0 38.0 76-77 25.87532781388878 32.0 20.0 35.0 2.0 37.0 78-79 25.281795269086597 32.0 18.0 35.0 2.0 36.5 80-81 24.673061915057627 31.5 11.0 35.0 2.0 36.0 82-83 24.014487060439922 31.0 7.0 34.0 2.0 35.5 84-85 23.362998752335667 30.5 2.0 34.0 2.0 35.0 86-87 22.71300381228236 30.0 2.0 34.0 2.0 35.0 88-89 22.030383726299732 29.5 2.0 34.0 2.0 35.0 90-91 21.26171138337575 29.0 2.0 34.0 2.0 35.0 92-93 20.425288519527975 28.5 2.0 34.0 2.0 35.0 94-95 19.513437463389465 26.5 2.0 33.0 2.0 34.5 96-97 18.6240484679074 25.0 2.0 33.0 2.0 34.0 98 18.01442198770205 25.0 2.0 32.0 2.0 34.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 187893.0 3 30582.0 4 22869.0 5 19000.0 6 18067.0 7 19069.0 8 21472.0 9 24741.0 10 27431.0 11 29694.0 12 32533.0 13 36204.0 14 32603.0 15 33296.0 16 37392.0 17 43045.0 18 48054.0 19 44831.0 20 45340.0 21 49077.0 22 52823.0 23 57616.0 24 63489.0 25 70315.0 26 79136.0 27 89012.0 28 100568.0 29 116015.0 30 136029.0 31 161558.0 32 196844.0 33 248083.0 34 326178.0 35 439475.0 36 572898.0 37 591161.0 38 268495.0 39 14508.0 40 2.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.94655867107718 16.904905028687757 12.52098483000885 24.627551470226216 2 16.095879711840023 18.65557877252205 38.99867349356461 26.249868022073326 3 20.637262045588635 22.37197367919922 27.628927155749345 29.361837119462802 4 13.557380884942674 14.428859360696855 35.1427902909991 36.87096946336137 5 14.984827214992832 36.00266393279043 33.10134918616625 15.911159666050482 6 34.925296404734816 33.518031064707834 16.583999720832278 14.97267280972507 7 31.04188025144934 30.437541728841882 19.17647788508196 19.34410013462682 8 27.94019652565906 34.11919887855947 18.589623027556588 19.350981568224878 9 26.749775693162835 16.573950134584102 18.858164221782932 37.81810995047013 10-11 26.718052673601594 25.21678721007037 26.01493252665851 22.050227589669532 12-13 26.76932791115407 22.142995541290926 26.78897723231789 24.298699315237112 14-15 23.597748473629345 23.69631886106978 24.464536430808216 28.24139623449266 16-17 23.981081191056102 26.96471678149553 24.947139057873315 24.10706296957505 18-19 23.92430946244607 26.03557542382564 26.806041030531958 23.23407408319633 20-21 24.354773989254085 25.284998536597275 26.888970049632505 23.471257424516136 22-23 24.090664492755856 25.02907617118361 26.800729063245903 24.07953027281463 24-25 23.810220030317865 25.25408203157966 26.964742140780533 23.97095579732194 26-27 23.884996466878484 25.449892694622527 26.85093649107138 23.81417434742761 28-29 23.854571726736324 25.585855805677703 26.752668341971635 23.806904125614338 30-31 24.0101605789742 25.490151807743565 26.697860866525065 23.801826746757172 32-33 23.80103722916718 25.550432338421437 26.642473316862432 24.006057115548955 34-35 23.99127609930611 25.58597832731721 26.770583539575572 23.652162033801112 36-37 24.067900746862804 25.49247982738824 26.620542987182894 23.819076438566057 38-39 24.01965840765981 25.587620429523373 26.586987766217156 23.805733396599663 40-41 24.177826412243416 25.470717243250974 26.636702833838832 23.714753510666778 42-43 24.008476861013232 25.41729211358838 26.622572873517704 23.951658151880682 44-45 23.998667444601633 25.622410025875542 26.55754727323904 23.821375256283787 46-47 24.126507863070128 25.591630319724416 26.42312067589562 23.85874114130983 48-49 24.11972401653775 25.655411471990064 26.23031784096166 23.994546670510523 50-51 23.910359706016347 25.965115702309877 26.160748927700133 23.963775663973646 52-53 24.026254317201452 25.938290889809256 26.15551383654108 23.879940956448216 54-55 23.97282160334798 25.728485603124255 26.282547497323215 24.016145296204545 56-57 23.926818166872938 25.966529546389534 26.22577382337364 23.88087846336389 58-59 24.00798695916906 25.874943819143688 26.261452075267 23.855617146420254 60-61 24.06292863739387 25.716536814904707 26.263302579310306 23.957231968391117 62-63 23.943067682024974 25.839646862444305 26.334845983495654 23.882439472035067 64-65 23.947571030411492 25.741420437494007 26.336005177536066 23.975003354558435 66-67 23.938124322609397 25.89621871624509 26.24232978354677 23.92332717759875 68-69 23.951510155094592 25.798549218191585 26.256408047362985 23.993532579350834 70-71 23.875921929460052 25.641292821319706 26.323701827249845 24.159083421970394 72-73 24.001035868669987 25.711489967941652 26.164556576541052 24.122917586847308 74-75 23.837599813193656 25.915431211310942 26.1618965422512 24.085072433244203 76-77 24.0352333098611 25.747660914080058 26.124884274934026 24.092221501124826 78-79 23.955892901337805 25.7107717048058 26.185962663780103 24.147372730076288 80-81 23.93513114535853 25.820009773529534 26.078198996524776 24.166660084587164 82-83 24.10259146339718 25.793924258690886 26.029115278978203 24.07436899893373 84-85 24.09909757818576 25.794281705084497 25.998641417092394 24.10797929963735 86-87 24.003969836385604 25.759218046159248 26.14018911090041 24.09662300655474 88-89 24.03563314257779 25.593821787347164 26.099765700982246 24.270779369092793 90-91 24.015456858855202 25.646948045325253 26.085521191081973 24.25207390473757 92-93 24.060819427273348 25.74329367673414 26.160901852349344 24.034985043643168 94-95 24.108708926384534 25.582435480890904 26.112996272440398 24.195859320284168 96-97 24.120357280628753 25.602192768077803 26.075854024558176 24.201595926735266 98 24.132056323995982 25.620280264738987 25.935854524043737 24.311808887221293 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 776.0 1 597.0 2 637.0 3 900.0 4 776.0 5 678.5 6 1075.0 7 1968.0 8 2817.5 9 2941.5 10 2474.5 11 2160.0 12 2330.5 13 2771.0 14 3142.5 15 3501.5 16 4026.5 17 4299.0 18 4526.0 19 4803.5 20 4916.5 21 5191.0 22 5790.0 23 6556.0 24 7806.5 25 9723.5 26 12142.5 27 15288.0 28 19107.0 29 23710.0 30 28992.5 31 34950.5 32 42039.5 33 49262.0 34 57184.5 35 66075.0 36 74962.5 37 84207.5 38 93671.5 39 103548.5 40 113959.5 41 124842.5 42 135483.5 43 146953.0 44 157837.0 45 166731.5 46 175939.0 47 184800.5 48 188896.0 49 188967.5 50 189011.0 51 188116.5 52 187779.5 53 187648.5 54 184471.0 55 177407.5 56 165847.5 57 154316.0 58 142328.5 59 126716.5 60 109300.5 61 90782.0 62 73183.5 63 56271.5 64 41592.5 65 31144.0 66 23469.5 67 17731.0 68 13442.5 69 10275.5 70 7815.0 71 5875.5 72 4379.5 73 3237.0 74 2492.5 75 1865.5 76 1293.5 77 843.5 78 548.0 79 327.0 80 181.5 81 116.5 82 64.5 83 33.0 84 25.5 85 20.0 86 14.5 87 17.5 88 17.0 89 14.0 90 9.5 91 7.5 92 5.0 93 4.0 94 6.0 95 5.0 96 2.5 97 2.5 98 2.5 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.4684553350300109 2 0.05002965311102389 3 0.058736408231028964 4 0.05552265830453494 5 0.06616678040150449 6 0.06694172719229029 7 0.044263137285470794 8 0.020444919745142794 9 0.012535903968593685 10-11 0.015168443801998359 12-13 0.010894840176341422 14-15 0.015612898579066682 16-17 0.014872140617286145 18-19 0.05736885507081874 20-21 0.08613305654057371 22-23 0.10287418647681383 24-25 0.07257148770182235 26-27 0.088446500636596 28-29 0.0892898250853923 30-31 0.05945437364013932 32-33 0.033778563057192436 34-35 0.3950975042610677 36-37 0.61750723321659 38-39 0.5672610508551994 40-41 0.5628392956371863 42-43 0.536046649973401 44-45 0.5208440173423975 46-47 0.5106557462988314 48-49 0.501242422046051 50-51 0.5150547089641742 52-53 0.5974042017614996 54-55 0.5672838434078695 56-57 0.5238070491895197 58-59 0.5021655204291928 60-61 0.513949270159671 62-63 0.5263484188122436 64-65 0.5454827667788517 66-67 0.5714092954411704 68-69 0.5256304534031333 70-71 0.4742788322372395 72-73 0.4569678884842451 74-75 0.438483128268737 76-77 0.4518965455151322 78-79 0.44616421851858434 80-81 0.44394194463324277 82-83 0.46290534845482445 84-85 0.43022082792580024 86-87 0.4320556284157489 88-89 0.45848359323681137 90-91 0.4414803489448643 92-93 0.43735489691156354 94-95 0.44812437804821903 96-97 0.4422438994593151 98 0.4369560272398355 >>END_MODULE >>Sequence Length Distribution pass #Length Count 98 4387398.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.50295883263236 #Duplication Level Percentage of deduplicated Percentage of total 1 75.36623691269918 43.33781618561358 2 13.694028918306817 15.748943622845477 3 4.789838192359092 8.262896051705852 4 2.095293986002331 4.819424152774168 5 1.1231804846562192 3.2293100585401318 6 0.6638377507676624 2.290358091236409 7 0.4334302130866999 1.7446463789960502 8 0.3150771929672842 1.4494296685039283 9 0.24141868660079516 1.2494059917330327 >10 1.186158554619276 12.0641071216683 >50 0.06383319205344519 2.5060349074800166 >100 0.026868548730609083 2.595236926252113 >500 4.7842041006219434E-4 0.1825785859803852 >1k 2.790783979343153E-4 0.3448220937013512 >5k 3.9868342561985484E-5 0.1749901629692545 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7633 0.1739755545314102 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4950 0.11282313571734318 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 6.837765801051101E-5 2 0.0 0.0 0.0 2.2792552670170338E-5 6.837765801051101E-5 3 0.0 2.2792552670170338E-5 0.0 2.2792552670170338E-5 6.837765801051101E-5 4 0.0 2.2792552670170338E-5 0.0 4.5585105340340676E-5 6.837765801051101E-5 5 0.0 4.5585105340340676E-5 0.0 4.5585105340340676E-5 6.837765801051101E-5 6 0.0 4.5585105340340676E-5 0.0 4.5585105340340676E-5 1.1396276335085169E-4 7 0.0 4.5585105340340676E-5 0.0 6.837765801051101E-5 1.1396276335085169E-4 8 2.2792552670170338E-5 4.5585105340340676E-5 0.0 6.837765801051101E-5 1.1396276335085169E-4 9 2.2792552670170338E-5 4.5585105340340676E-5 0.0 9.117021068068135E-5 1.1396276335085169E-4 10-11 9.117021068068135E-5 4.5585105340340676E-5 0.0 2.0513297403153304E-4 1.1396276335085169E-4 12-13 9.117021068068135E-5 4.5585105340340676E-5 0.0 2.2792552670170338E-4 2.0513297403153304E-4 14-15 9.117021068068135E-5 4.5585105340340676E-5 0.0 3.0769946104729955E-4 2.3932180303678854E-4 16-17 9.117021068068135E-5 4.5585105340340676E-5 0.0 3.7607711905781054E-4 2.7351063204204406E-4 18-19 9.117021068068135E-5 9.117021068068135E-5 0.0 5.242287114139177E-4 2.7351063204204406E-4 20-21 9.117021068068135E-5 9.117021068068135E-5 0.0 5.242287114139177E-4 2.9630318471221437E-4 22-23 9.117021068068135E-5 9.117021068068135E-5 0.0 6.267951984296842E-4 3.532845663876402E-4 24-25 9.117021068068135E-5 1.1396276335085169E-4 0.0 6.837765801051101E-4 3.646808427227254E-4 26-27 9.117021068068135E-5 1.1396276335085169E-4 0.0 7.179654091103657E-4 4.2166222439815127E-4 28-29 9.117021068068135E-5 1.2535903968593685E-4 0.0 0.001219401567854113 4.330585007332364E-4 30-31 9.117021068068135E-5 1.3675531602102203E-4 0.0 0.0029288430181168886 4.444547770683216E-4 32-33 9.117021068068135E-5 1.5954786869119237E-4 0.0 0.006621236550684483 4.5585105340340676E-4 34-35 9.117021068068135E-5 1.5954786869119237E-4 0.0 0.011612805585451788 4.5585105340340676E-4 36-37 9.117021068068135E-5 1.5954786869119237E-4 0.0 0.01854174159718357 4.5585105340340676E-4 38-39 9.117021068068135E-5 1.823404213613627E-4 0.0 0.029527751984205673 4.900398824086623E-4 40-41 9.117021068068135E-5 1.937366976964479E-4 0.0 0.04108357618798203 5.242287114139177E-4 42-43 9.117021068068135E-5 2.2792552670170338E-4 0.0 0.05151116903458496 5.470212640840881E-4 44-45 9.117021068068135E-5 2.2792552670170338E-4 0.0 0.06359122194977523 5.698138167542584E-4 46-47 9.117021068068135E-5 2.2792552670170338E-4 0.0 0.07527240519323754 5.926063694244287E-4 48-49 9.117021068068135E-5 2.507180793718737E-4 0.0 0.08754619480612427 6.495877510998547E-4 50-51 9.117021068068135E-5 2.7351063204204406E-4 0.0 0.10087983811817391 6.609840274349398E-4 52-53 9.117021068068135E-5 2.7351063204204406E-4 0.0 0.11315362773106064 6.951728564401952E-4 54-55 9.117021068068135E-5 2.7351063204204406E-4 0.0 0.1257123242523245 7.179654091103657E-4 56-57 9.117021068068135E-5 2.7351063204204406E-4 0.0 0.13874966437966194 7.40757961780536E-4 58-59 9.117021068068135E-5 2.7351063204204406E-4 0.0 0.15286965075883246 7.863430671208767E-4 60-61 9.117021068068135E-5 2.7351063204204406E-4 0.0 0.166590767466275 8.433244487963025E-4 62-63 9.117021068068135E-5 2.849069083771292E-4 0.0 0.18017512885769651 8.661170014664728E-4 64-65 9.117021068068135E-5 2.9630318471221437E-4 0.0 0.19453443703990383 8.775132778015579E-4 66-67 9.117021068068135E-5 2.9630318471221437E-4 0.0 0.20928121861750404 8.889095541366432E-4 68-69 9.117021068068135E-5 2.9630318471221437E-4 0.0 0.22426732199814103 8.889095541366432E-4 70-71 9.117021068068135E-5 3.190957373823847E-4 1.1396276335085169E-5 0.23939018069479906 9.230983831418987E-4 72-73 9.117021068068135E-5 3.4188829005255504E-4 2.2792552670170338E-5 0.25483213512883945 0.001071249975498006 74-75 9.117021068068135E-5 3.646808427227254E-4 2.2792552670170338E-5 0.27060458157659734 0.0011738164625137723 76-77 9.117021068068135E-5 4.444547770683216E-4 2.2792552670170338E-5 0.28647959451137095 0.0011852127388488575 78-79 9.117021068068135E-5 4.5585105340340676E-4 2.2792552670170338E-5 0.30377914198803024 0.0011852127388488575 80-81 9.117021068068135E-5 4.672473297384919E-4 2.2792552670170338E-5 0.3220359766768367 0.0011966090151839426 82-83 9.117021068068135E-5 4.7864360607357707E-4 2.2792552670170338E-5 0.33868593640239614 0.001276382949529539 84-85 9.117021068068135E-5 4.900398824086623E-4 2.2792552670170338E-5 0.356464127485129 0.0013105717785347943 86 9.117021068068135E-5 5.014361587437474E-4 2.2792552670170338E-5 0.3705385287589592 0.0013219680548698797 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 8400 0.0 46.41848 1 GGTATCA 4360 0.0 41.705887 1 TCAACGC 10700 0.0 35.73484 4 CAACGCA 10875 0.0 34.991165 5 TATCAAC 11050 0.0 34.8934 2 ATCAACG 11035 0.0 34.733097 3 AACGCAG 11785 0.0 32.59193 6 GTACCTG 4380 0.0 30.059288 1 ACGCAGA 13765 0.0 27.66157 7 CGCAGAG 14300 0.0 26.365837 8 TACCTGG 4815 0.0 26.184603 2 GTACATG 13390 0.0 25.57874 1 TACATGG 13695 0.0 24.538698 2 ACATGGG 13840 0.0 23.420324 3 GCAGAGT 16380 0.0 22.542849 9 GTGTAGC 2255 0.0 22.456026 1 GAGTACA 9935 0.0 20.71221 1 AGAGTAC 13975 0.0 20.029821 10-11 CATGGGG 11255 0.0 19.919249 4 AGTACAT 9685 0.0 19.45592 2 >>END_MODULE