##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921437_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4132682 Sequences flagged as poor quality 0 Sequence length 101 %GC 49 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.942027961502966 33.0 31.0 34.0 30.0 34.0 2 32.06134732844192 34.0 31.0 34.0 30.0 34.0 3 32.18767376730172 34.0 31.0 34.0 30.0 34.0 4 35.71948119889215 37.0 35.0 37.0 35.0 37.0 5 35.522611466355265 37.0 35.0 37.0 33.0 37.0 6 35.55644518499125 37.0 35.0 37.0 33.0 37.0 7 35.49262851581612 37.0 35.0 37.0 33.0 37.0 8 35.44540107368532 37.0 35.0 37.0 33.0 37.0 9 37.07149981537413 39.0 37.0 39.0 34.0 39.0 10-11 36.982678560799016 39.0 37.0 39.0 33.0 39.0 12-13 36.864638750332105 39.0 37.0 39.0 33.0 39.0 14-15 38.163509556263946 40.0 38.0 41.0 33.0 41.0 16-17 38.06520112120894 40.0 38.0 41.0 33.0 41.0 18-19 37.96614583459362 40.0 38.0 41.0 33.0 41.0 20-21 37.852994617054975 40.0 38.0 41.0 33.0 41.0 22-23 37.81614578619889 40.0 38.0 41.0 33.0 41.0 24-25 37.87081101328387 40.0 38.0 41.0 33.0 41.0 26-27 37.75793927526966 40.0 38.0 41.0 33.0 41.0 28-29 37.62438532652645 40.0 38.0 41.0 32.0 41.0 30-31 37.48509805496769 40.0 37.5 41.0 32.0 41.0 32-33 37.32474952101323 40.0 37.0 41.0 32.0 41.0 34-35 37.17424653046133 40.0 37.0 41.0 31.0 41.0 36-37 37.06947727891959 40.0 37.0 41.0 31.0 41.0 38-39 37.035491963814295 40.0 37.0 41.0 31.0 41.0 40-41 36.87463298652062 40.0 37.0 41.0 31.0 41.0 42-43 36.637507434639296 40.0 36.0 41.0 30.0 41.0 44-45 36.425208254591084 39.0 36.0 41.0 30.0 41.0 46-47 36.143357146763286 39.0 35.0 40.5 29.5 41.0 48-49 35.79867734802726 39.0 35.0 40.0 28.5 41.0 50-51 35.520995203599014 38.5 35.0 40.0 28.0 41.0 52-53 35.20885698439899 38.0 34.5 40.0 27.0 41.0 54-55 34.878012148043325 38.0 34.0 40.0 26.5 41.0 56-57 34.48894712924924 38.0 34.0 40.0 26.0 41.0 58-59 34.093050469404616 37.0 33.0 40.0 25.0 41.0 60-61 33.655562416851815 36.5 33.0 39.0 24.0 41.0 62-63 33.21577065450475 36.0 32.5 39.0 22.5 40.0 64-65 32.696949462842774 35.5 32.0 39.0 22.0 40.0 66-67 32.155391220519746 35.0 31.0 38.0 20.0 40.0 68-69 31.641063599860814 35.0 31.0 37.5 18.5 39.5 70-71 31.074995971139323 34.5 30.0 37.0 17.0 39.0 72-73 30.518223395848025 34.0 30.0 36.0 13.0 39.0 74-75 29.997333087810773 34.0 29.0 35.5 9.0 38.0 76-77 28.71909077446559 32.5 28.0 34.5 7.5 36.0 78-79 29.651293518349583 34.0 29.5 35.0 7.5 37.0 80-81 29.674665386787563 34.0 30.0 35.0 7.0 36.5 82-83 29.327208456881028 34.0 29.0 35.0 2.0 36.0 84-85 28.832485901407367 34.0 29.0 35.0 2.0 35.5 86-87 28.3133724056194 33.0 28.5 35.0 2.0 35.0 88-89 27.762613358588926 33.0 27.0 35.0 2.0 35.0 90-91 27.275855364627617 33.0 26.0 35.0 2.0 35.0 92-93 26.825868044045006 32.5 25.0 34.0 2.0 35.0 94-95 26.319654887552442 32.0 25.0 34.0 2.0 35.0 96-97 25.530475124870485 32.0 23.5 34.0 2.0 35.0 98-99 24.50166175379572 31.5 10.5 34.0 2.0 35.0 100-101 20.908721987319616 27.0 2.0 32.5 2.0 34.5 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 26764.0 3 14010.0 4 8568.0 5 6281.0 6 5596.0 7 5818.0 8 6798.0 9 7927.0 10 9550.0 11 11180.0 12 13591.0 13 15799.0 14 17541.0 15 20013.0 16 22828.0 17 26804.0 18 27638.0 19 24438.0 20 24129.0 21 25607.0 22 27493.0 23 30312.0 24 34446.0 25 40339.0 26 48396.0 27 57440.0 28 69644.0 29 84912.0 30 103701.0 31 129388.0 32 165789.0 33 221891.0 34 313593.0 35 472662.0 36 732614.0 37 891850.0 38 376312.0 39 11020.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.610660189908835 17.237424881868353 13.484570969413825 24.667343958808985 2 16.21571657340197 18.903898243319954 38.348075172490894 26.532310010787185 3 20.65573246843191 22.19609008480993 27.416642608913865 29.731534837844293 4 14.140834498580517 14.806254199429786 34.31001022996229 36.74290107202741 5 15.785532044221354 35.34867581782598 32.42763021624792 16.43816192170474 6 35.44204829300845 32.80744395339805 16.427947416388943 15.32256033720456 7 31.77631652233043 29.88280843244594 18.911155356681885 19.429719688541745 8 28.316851110112555 33.2870256541313 18.54250717930519 19.85361605645096 9 26.897942169740418 16.73977739557228 18.795500438519046 37.56677999616826 10-11 26.894852526468014 24.826859888427343 25.754783099660035 22.523504485444604 12-13 27.057579240745543 21.769703625556964 26.448194815054972 24.72452231864252 14-15 23.94859224706793 23.40823285334749 24.16690557803152 28.476269321553065 16-17 24.43013801690983 26.542015081741177 24.709083902352116 24.318762998996874 18-19 24.447312448491818 25.872796260776852 26.128532225164324 23.551359065567002 20-21 24.92358011749383 24.927247110034706 26.12594219319072 24.023230579280742 22-23 24.63429628201371 24.619493232173912 26.063111344473988 24.68309914133838 24-25 24.45555073316594 24.934988513003386 26.090901587023406 24.518559166807265 26-27 24.504851826456775 24.966836030217756 26.24377895721007 24.2845331861154 28-29 24.43820751617357 25.344573680794674 26.005142964813082 24.212075838218674 30-31 24.60794239690884 25.080373986462618 25.879806589432786 24.43187702719576 32-33 24.37727279051942 25.077656763939533 25.96973101291668 24.57533943262437 34-35 24.627938658141087 25.07926785960384 26.066200354060083 24.22659312819499 36-37 24.576335173104415 25.15453568871141 25.941522432147195 24.327606706036978 38-39 24.574584573706062 25.142216566083587 25.987099921938352 24.296098938272 40-41 24.699010525464875 25.10273394890204 25.841046094076926 24.35720943155616 42-43 24.61088337214931 25.085144500341013 25.789567102117868 24.51440502539181 44-45 24.6596435252135 24.994654656958453 25.765497289938306 24.580204527889745 46-47 24.72921843866837 25.149469437198636 25.805192659917626 24.316119464215376 48-49 24.685973370333702 25.23523186471184 25.60299319685092 24.475801568103538 50-51 24.468855870680475 25.394964185461234 25.629864001548736 24.506315942309552 52-53 24.641065021718912 25.462671802772753 25.459695448816028 24.436567726692303 54-55 24.621695354597538 25.127888192084434 25.536985216754154 24.713431236563878 56-57 24.65412296269266 25.284014327272974 25.5637818696404 24.498080840393964 58-59 24.85536145933237 25.22385565896967 25.46856668375425 24.452216197943706 60-61 24.824354611789452 25.124622683651488 25.60588402976038 24.44513867479868 62-63 24.515776089307167 25.25700156531487 25.722106756990915 24.505115588387046 64-65 24.63016052895157 25.203555995654824 25.580818512046626 24.585464963346972 66-67 24.63101062409573 25.32529621181478 25.40550524184832 24.638187922241176 68-69 24.630297841554867 25.26799880585422 25.487930338590694 24.61377301400022 70-71 24.676295676407968 25.17243982937762 25.543177597415013 24.608086896799403 72-73 24.836687131428842 25.07667780773661 25.477751484632183 24.608883576202363 74-75 24.507845671907123 25.451464010161263 25.371003339838055 24.669686978093562 76-77 24.64356929514868 25.12563094612488 25.5153581298144 24.71544162891205 78-79 24.612384281933515 25.121411798550973 25.60646570647924 24.659738213036267 80-81 24.633839701073676 25.308624194839467 25.41403847052237 24.643497633564486 82-83 24.693146587477337 25.226144871649335 25.418373761022846 24.662334779850482 84-85 24.673479513056947 25.252631961083278 25.428350153682327 24.645538372177448 86-87 24.6247662340667 25.271831064223537 25.507889384485928 24.595513317223837 88-89 24.59429559814601 25.137793228356703 25.40860543996341 24.85930573353387 90-91 24.613279617811166 25.124295083718902 25.37462372865504 24.887801569814894 92-93 24.731824465161996 25.398516954794477 25.45551711699498 24.414141463048548 94-95 24.756995742116743 25.175572648393707 25.396634106382955 24.6707975031066 96-97 24.503415425507715 25.213893623796956 25.57123802277983 24.711452927915502 98-99 24.63110455130269 25.26300237801122 25.438355446671775 24.66753762401432 100-101 25.040482447442393 24.55673792117868 25.601180830310334 24.801598801068593 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 254.0 1 224.0 2 422.0 3 633.0 4 462.0 5 361.0 6 716.0 7 1606.5 8 2332.5 9 2214.0 10 1625.5 11 1181.0 12 1080.0 13 1099.5 14 1168.0 15 1280.5 16 1381.5 17 1506.0 18 1639.5 19 1729.0 20 1830.5 21 2001.0 22 2220.5 23 2519.0 24 2896.5 25 3457.5 26 4205.5 27 5302.5 28 6837.0 29 8873.5 30 11733.5 31 15274.0 32 20017.5 33 25741.0 34 32023.5 35 39518.0 36 48744.5 37 58676.5 38 68793.5 39 79119.5 40 89523.0 41 99893.5 42 111307.0 43 124753.5 44 138739.5 45 152703.0 46 162810.5 47 174465.0 48 192881.0 49 198453.5 50 190136.5 51 185473.0 52 186152.5 53 186839.5 54 184917.5 55 179020.0 56 167642.5 57 154362.0 58 142795.5 59 130192.5 60 112616.0 61 93896.0 62 76869.5 63 58768.5 64 42817.5 65 32152.5 66 24569.0 67 19113.5 68 14683.0 69 10992.0 70 8229.0 71 6221.5 72 4573.5 73 3377.5 74 2616.0 75 1996.0 76 1416.5 77 897.5 78 534.5 79 317.0 80 191.5 81 106.0 82 45.5 83 20.0 84 12.0 85 6.0 86 2.5 87 1.5 88 0.5 89 1.0 90 1.5 91 1.5 92 0.5 93 0.0 94 0.0 95 0.0 96 0.5 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.3227202092974974 2 0.0 3 0.006412300777074064 4 0.0642923893007011 5 4.35552505612578E-4 6 0.06596200723888265 7 0.07752834599903889 8 0.10881553431887572 9 0.09710401139018196 10-11 0.10069731956148574 12-13 0.10093929317571496 14-15 0.06867211171824979 16-17 0.03857059410813607 18-19 0.04025231072702908 20-21 0.029786951911615747 22-23 0.04298661256781915 24-25 0.03602987115872937 26-27 0.022721322376122816 28-29 0.02464501260924504 30-31 0.003048867539288046 32-33 0.005674281253674974 34-35 0.008045622673121233 36-37 0.011251773061658265 38-39 0.016732475423949872 40-41 0.02160824375066845 42-43 0.003593308171303769 44-45 0.01404656830600564 46-47 0.023822302320865723 48-49 0.0026738084372327706 50-51 0.006823655921263722 52-53 0.002637512395098389 54-55 0.004016761996204886 56-57 0.003484420044900624 58-59 0.0012703614747033524 60-61 0.005033051175967568 62-63 0.014663601022290126 64-65 0.006799458559840801 66-67 0.03873997563809652 68-69 0.061291916484258885 70-71 0.012485838494227236 72-73 0.03076694504924405 74-75 0.050632978777462194 76-77 0.31158942304295373 78-79 0.07600391222939486 80-81 0.032981003619441326 82-83 0.02780276827493623 84-85 0.01892233663272422 86-87 0.11828880131594931 88-89 0.5343866283444988 90-91 0.1332669680367374 92-93 0.04820114395445863 94-95 0.008396484413753586 96-97 0.006146129801421934 98-99 0.010828319236757148 100-101 0.008118214757389995 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4132682.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.12518117913982 #Duplication Level Percentage of deduplicated Percentage of total 1 72.34674767368486 37.71087330212336 2 15.135739236027357 15.779062999162827 3 5.283602109123391 8.262261516496263 4 2.3239514562782695 4.845455628401226 5 1.2772235387429296 3.328775418161866 6 0.8010064750143338 2.5051564581471766 7 0.5212131181682091 1.901782975222362 8 0.37373264329614964 1.558470539549651 9 0.28846024141786375 1.3532438112196103 >10 1.5064250743955558 14.034755004470059 >50 0.09847241295432416 3.5073946047624776 >100 0.04082243342329467 3.656363928755715 >500 0.0017667201653184873 0.6288576623834912 >1k 7.438820517397468E-4 0.6704437548046596 >5k 9.298525646745981E-5 0.2571023963391376 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5311 0.12851218651713342 No Hit GAGTAAGCAGTGGTATCAACGCAGAGTAAGCAGTGGTATCAACGCAGAGT 5298 0.12819762081863545 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.4197361422921E-5 2 0.0 0.0 0.0 2.4197361422921E-5 2.4197361422921E-5 3 0.0 0.0 0.0 4.8394722845842E-5 2.4197361422921E-5 4 0.0 0.0 0.0 4.8394722845842E-5 2.4197361422921E-5 5 0.0 0.0 0.0 4.8394722845842E-5 2.4197361422921E-5 6 0.0 0.0 0.0 4.8394722845842E-5 2.4197361422921E-5 7 0.0 0.0 0.0 4.8394722845842E-5 2.4197361422921E-5 8 0.0 0.0 0.0 4.8394722845842E-5 2.4197361422921E-5 9 0.0 0.0 0.0 4.8394722845842E-5 2.4197361422921E-5 10-11 0.0 0.0 0.0 4.8394722845842E-5 2.4197361422921E-5 12-13 0.0 0.0 0.0 6.04934035573025E-5 6.04934035573025E-5 14-15 0.0 1.20986807114605E-5 0.0 7.2592084268763E-5 1.814802106719075E-4 16-17 0.0 2.4197361422921E-5 0.0 7.2592084268763E-5 2.66170975652131E-4 18-19 0.0 2.4197361422921E-5 0.0 1.2098680711460499E-4 2.66170975652131E-4 20-21 0.0 2.4197361422921E-5 0.0 1.45184168537526E-4 2.66170975652131E-4 22-23 1.20986807114605E-5 2.4197361422921E-5 0.0 2.4197361422921E-4 3.024670177865125E-4 24-25 2.4197361422921E-5 2.4197361422921E-5 0.0 3.14565698497973E-4 3.38763059920894E-4 26-27 2.4197361422921E-5 2.4197361422921E-5 0.0 4.11355144189657E-4 3.750591020552755E-4 28-29 2.4197361422921E-5 2.4197361422921E-5 0.0 8.227102883793141E-4 3.87157782766736E-4 30-31 2.4197361422921E-5 2.4197361422921E-5 0.0 0.0024802295458494026 4.11355144189657E-4 32-33 2.4197361422921E-5 3.62960421343815E-5 0.0 0.0059767482714614874 5.32341951304262E-4 34-35 2.4197361422921E-5 4.8394722845842E-5 0.0 0.01015079311691536 5.56539312727183E-4 36-37 2.4197361422921E-5 8.46907649802235E-5 0.0 0.01572828492489865 5.56539312727183E-4 38-39 2.4197361422921E-5 1.2098680711460499E-4 0.0 0.0251773545605493 5.80736674150104E-4 40-41 2.4197361422921E-5 1.2098680711460499E-4 0.0 0.03615085796584397 5.80736674150104E-4 42-43 2.4197361422921E-5 1.2098680711460499E-4 0.0 0.046374243167028095 6.170327162844855E-4 44-45 2.4197361422921E-5 1.2098680711460499E-4 0.0 0.05788008852362703 6.29131396995946E-4 46-47 2.4197361422921E-5 1.2098680711460499E-4 0.0 0.06932544047666866 6.53328758418867E-4 48-49 2.4197361422921E-5 1.2098680711460499E-4 0.0 0.08032314124338626 7.98512926956393E-4 50-51 2.4197361422921E-5 1.2098680711460499E-4 0.0 0.09221614438275193 8.46907649802235E-4 52-53 2.4197361422921E-5 1.2098680711460499E-4 0.0 0.103988160715003 8.46907649802235E-4 54-55 2.4197361422921E-5 1.2098680711460499E-4 0.0 0.1161473348300208 8.71105011225156E-4 56-57 2.4197361422921E-5 1.2098680711460499E-4 0.0 0.12984304139539407 9.194997340709979E-4 58-59 2.4197361422921E-5 1.2098680711460499E-4 0.0 0.1437686228942851 9.436970954939189E-4 60-61 2.4197361422921E-5 1.2098680711460499E-4 0.0 0.1572223558454292 9.799931376283004E-4 62-63 2.4197361422921E-5 1.2098680711460499E-4 0.0 0.17175287137989326 9.92091818339761E-4 64-65 2.4197361422921E-5 1.2098680711460499E-4 0.0 0.1853638871802863 9.92091818339761E-4 66-67 2.4197361422921E-5 1.2098680711460499E-4 0.0 0.19974921854621286 9.92091818339761E-4 68-69 2.4197361422921E-5 1.2098680711460499E-4 0.0 0.21510244436905623 9.92091818339761E-4 70-71 2.4197361422921E-5 1.2098680711460499E-4 0.0 0.23199220264225506 0.0010283878604741424 72-73 2.4197361422921E-5 1.2098680711460499E-4 0.0 0.24792616513924853 0.0011735720290116684 74-75 2.4197361422921E-5 1.2098680711460499E-4 0.0 0.26494900890027345 0.00120986807114605 76-77 2.4197361422921E-5 1.2098680711460499E-4 0.0 0.2823953064861995 0.00120986807114605 78-79 2.4197361422921E-5 1.2098680711460499E-4 0.0 0.30201936660018847 0.0012461641132804316 80-81 2.4197361422921E-5 1.2098680711460499E-4 0.0 0.3208933085100668 0.0013187561975491944 82-83 2.4197361422921E-5 1.2098680711460499E-4 0.0 0.3397309543778108 0.0014155456432408784 84-85 2.4197361422921E-5 1.330854878260655E-4 0.0 0.35910094219685906 0.001427644323952339 86-87 2.4197361422921E-5 1.45184168537526E-4 0.0 0.3791242587743262 0.0014881377275096416 88-89 2.4197361422921E-5 1.45184168537526E-4 0.0 0.401869778511872 0.001548631131066944 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTACCTG 5440 0.0 36.34716 1 TACCTGG 5660 0.0 33.820606 2 ACCTGGG 7525 0.0 25.186607 3 GTATCAA 13905 0.0 23.06032 1 GTACATG 11865 0.0 22.688303 1 TACATGG 12220 0.0 21.689812 2 GAGTACA 9600 0.0 20.745615 1 ACATGGG 12320 0.0 20.396152 3 TCAACGC 15845 0.0 19.756601 4 AGTACAT 8995 0.0 19.749823 2 CAACGCA 15975 0.0 19.554005 5 TATCAAC 16420 0.0 19.266102 2 ATCAACG 16620 0.0 18.920399 3 AACGCAG 16805 0.0 18.702137 6 AGAGTAC 12590 0.0 18.534466 10-11 GTGTAGC 2255 0.0 17.959475 1 CCTGGGG 8440 0.0 17.33514 4 GTATATA 980 0.0 17.016228 1 CATGGGG 10155 0.0 16.699652 4 ACGCAGA 19070 0.0 16.456533 7 >>END_MODULE