##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921436_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3049656 Sequences flagged as poor quality 0 Sequence length 98 %GC 48 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.81750531863266 31.0 31.0 34.0 28.0 34.0 2 30.9360036017177 31.0 31.0 34.0 28.0 34.0 3 31.06919108253521 33.0 31.0 34.0 28.0 34.0 4 34.59296425564064 37.0 35.0 37.0 32.0 37.0 5 34.60146816558982 37.0 35.0 37.0 32.0 37.0 6 34.698206289496255 37.0 35.0 37.0 32.0 37.0 7 34.60278831448531 37.0 35.0 37.0 32.0 37.0 8 34.595004485751836 37.0 35.0 37.0 32.0 37.0 9 36.11407286592324 39.0 37.0 39.0 32.0 39.0 10-11 36.00642039626764 39.0 37.0 39.0 32.0 39.0 12-13 35.86588159451426 39.0 37.0 39.0 31.0 39.0 14-15 36.9578539350012 40.0 37.0 41.0 31.0 41.0 16-17 36.83071074245751 40.0 37.0 41.0 31.0 41.0 18-19 36.67456345896062 40.0 37.0 41.0 30.5 41.0 20-21 36.57305233770629 40.0 37.0 41.0 30.0 41.0 22-23 36.628311684990045 40.0 37.0 41.0 30.0 41.0 24-25 36.52214774387669 40.0 37.0 41.0 30.0 41.0 26-27 36.27810087432812 40.0 36.0 41.0 29.5 41.0 28-29 36.069984122799426 39.0 36.0 41.0 29.0 41.0 30-31 35.836920787131405 39.0 36.0 40.5 27.5 41.0 32-33 35.57998951357136 39.0 35.0 40.0 27.0 41.0 34-35 35.177343116731855 39.0 35.0 40.0 25.5 41.0 36-37 34.813635537909846 38.0 35.0 40.0 24.0 41.0 38-39 34.60601408814634 38.0 34.0 40.0 24.0 41.0 40-41 34.368374990490736 38.0 34.0 40.0 23.5 41.0 42-43 34.10489674901038 38.0 33.5 40.0 22.0 41.0 44-45 33.80121872762042 38.0 33.0 40.0 20.0 41.0 46-47 33.5234572358325 38.0 33.0 40.0 18.5 41.0 48-49 33.32834129488703 38.0 33.0 40.0 16.5 41.0 50-51 32.547990658618545 37.0 32.0 39.0 15.0 40.5 52-53 33.012700448837506 37.5 32.5 39.0 18.0 40.0 54-55 33.46607305873187 38.0 33.0 40.0 18.0 41.0 56-57 33.338032715821065 38.0 33.0 40.0 16.0 41.0 58-59 33.032373815276216 37.0 33.0 40.0 13.5 41.0 60-61 32.604571466421135 36.5 32.0 39.5 8.5 41.0 62-63 32.14963015500764 36.0 31.5 39.0 7.5 40.5 64-65 31.636483098421593 35.5 31.0 39.0 4.0 40.0 66-67 31.172818180148845 35.0 31.0 38.0 2.0 40.0 68-69 30.678772786176538 35.0 30.0 37.5 2.0 40.0 70-71 30.174920220510117 34.5 29.5 37.0 2.0 39.0 72-73 29.643232220289764 34.0 29.0 36.5 2.0 39.0 74-75 29.06946799901366 34.0 28.5 36.0 2.0 38.5 76-77 28.508529158698554 34.0 27.5 35.0 2.0 37.5 78-79 27.967923103458226 33.5 26.5 35.0 2.0 37.0 80-81 27.412386347837263 33.0 26.0 35.0 2.0 36.0 82-83 26.81105934570981 32.5 25.0 35.0 2.0 36.0 84-85 26.223197960688026 32.0 24.5 34.5 2.0 35.0 86-87 25.63289597252936 32.0 22.0 34.0 2.0 35.0 88-89 25.016074108030544 31.0 19.5 34.0 2.0 35.0 90-91 24.307154479062557 31.0 16.5 34.0 2.0 35.0 92-93 23.524038776832533 30.5 4.5 34.0 2.0 35.0 94-95 22.654138696298862 30.0 2.0 34.0 2.0 35.0 96-97 21.777467032347253 29.5 2.0 34.0 2.0 35.0 98 21.15954192866343 29.0 2.0 34.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 70480.0 3 12571.0 4 9918.0 5 8595.0 6 8098.0 7 8281.0 8 9587.0 9 11054.0 10 12322.0 11 13851.0 12 15964.0 13 19516.0 14 15871.0 15 15717.0 16 17824.0 17 20813.0 18 23549.0 19 21739.0 20 22120.0 21 23907.0 22 26289.0 23 29320.0 24 33262.0 25 37453.0 26 42567.0 27 49298.0 28 58031.0 29 68608.0 30 82364.0 31 100608.0 32 127252.0 33 167220.0 34 231910.0 35 337266.0 36 476608.0 37 543925.0 38 262040.0 39 13858.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.76779693920365 17.40823395286889 13.174713509711616 24.64925559821585 2 15.820964370628923 18.936102432432346 38.97049198184132 26.272441215097412 3 19.859653474605135 22.56988944602266 28.477410489470568 29.09304658990164 4 13.679434716531444 15.026563283347812 35.32431091640703 35.96969108371372 5 15.100384289890625 35.91054652775659 33.26225725929214 15.726811923060641 6 34.46212890845468 33.718239498919765 16.802745598353532 15.01688599427202 7 30.464894720576975 30.79325524067852 19.736766995584897 19.00508304315961 8 27.641736452963663 33.786866368137765 19.216379666318023 19.355017512580556 9 26.856083090919224 16.301542376827943 19.307029079853994 37.535345452398836 10-11 26.374015965597923 25.11497995240264 26.493804684862198 22.017199397137237 12-13 26.480210216488548 22.287850651187387 26.96705323871952 24.26488589360455 14-15 23.661905360052973 23.77257761570408 24.651330739993828 27.91418628424912 16-17 23.952229153138262 26.85981949008573 25.25881068104449 23.929140675731517 18-19 23.87606994086288 26.14496140207203 26.74522414621278 23.233744510852304 20-21 24.4462415448441 25.380934321906302 26.737746947003387 23.435077186246208 22-23 24.24394022131173 25.0645324310036 26.566516863780475 24.12501048390419 24-25 24.037491420713444 25.32487253924403 26.63857194729582 23.999064092746703 26-27 24.01201385117876 25.412114579266586 26.674021884809935 23.901849684744718 28-29 23.97665847544883 25.574700854252008 26.563341570501635 23.88529909979752 30-31 24.209562683746324 25.517295122847543 26.403575834733306 23.869566358672824 32-33 23.990139380480173 25.561720720750277 26.373417659234573 24.07472223953498 34-35 24.167767824137538 25.537764144007525 26.474756530995837 23.819711500859107 36-37 24.275781132006955 25.43969443850682 26.371812150327933 23.912712279158285 38-39 24.180218744710626 25.561074012839345 26.31299452065913 23.945712721790898 40-41 24.293317360662392 25.482656691555505 26.33172996266427 23.892295985117833 42-43 24.218120229825914 25.43580508334817 26.213034243005946 24.133040443819965 44-45 24.177586315780275 25.525621389029823 26.19033917541225 24.10645311977765 46-47 24.293982317284488 25.514322485169057 26.134088045586097 24.05760715196036 48-49 24.269439239194387 25.573546020757366 26.03177287932013 24.125241860728114 50-51 24.11410404820605 25.784175148071824 26.011804196809603 24.089916606912528 52-53 24.24870596284335 25.710080560589095 25.903449737133105 24.137763739434455 54-55 24.18542216934482 25.62271304282987 26.047057476622946 24.14480731120236 56-57 24.204432390398082 25.708339200776713 26.035470467824588 24.051757941000616 58-59 24.32521632247182 25.583750855596428 25.95993302938504 24.131099792546717 60-61 24.24881997466169 25.67710074847604 26.09043112721191 23.98364814965036 62-63 24.110864077380135 25.734273091199967 26.04409769212085 24.110765139299048 64-65 24.17342092385671 25.646616736044077 26.010549192317672 24.169413147781547 66-67 24.208397261403945 25.64790893343232 25.9807803349006 24.162913470263135 68-69 24.173508952272027 25.647564331006016 26.02421570538284 24.154711011339117 70-71 24.177286974848293 25.489794401469158 26.00648120481916 24.326437418863396 72-73 24.24065114491817 25.591770918159025 25.909279203957013 24.258298732965795 74-75 24.08703940934743 25.82212087185043 25.794427442886626 24.296412275915515 76-77 24.269020879468524 25.569901402509753 25.799374538648106 24.361703179373617 78-79 24.175302743224318 25.61701952384875 25.95844797759288 24.24922975533405 80-81 24.229662410504357 25.686684485203493 25.83520890375469 24.248444200537456 82-83 24.350476859667012 25.568579927797074 25.82080240562173 24.260140806914183 84-85 24.2410954318788 25.63646181459732 25.771522777350214 24.350919976173657 86-87 24.329714272253092 25.586443898952272 25.859508473881032 24.224333354913604 88-89 24.17228571805215 25.457960926995177 25.89337973582219 24.47637361913048 90-91 24.22542200396093 25.554067859690015 25.85328748659962 24.36722264974944 92-93 24.34807520532604 25.611612457253603 25.83646864583165 24.20384369158871 94-95 24.431037999560417 25.428272316178273 25.838478554502874 24.30221112975843 96-97 24.351906067526652 25.4007514676949 25.933560054315503 24.31378241046295 98 24.33010451512868 25.469323042058768 25.72272799609102 24.477844446721534 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 882.0 1 664.5 2 713.5 3 973.5 4 794.0 5 718.0 6 1145.5 7 2210.5 8 3127.5 9 3046.0 10 2302.0 11 1753.0 12 1775.0 13 1990.5 14 2235.0 15 2467.5 16 2677.5 17 2797.5 18 2774.5 19 2714.0 20 2616.5 21 2494.5 22 2544.0 23 2718.0 24 2997.5 25 3612.5 26 4570.0 27 6071.0 28 8108.5 29 10806.0 30 14569.5 31 19217.5 32 24816.5 33 30709.5 34 37019.0 35 43780.5 36 50652.5 37 58091.0 38 65562.0 39 72837.0 40 80256.5 41 88065.0 42 96610.0 43 105011.5 44 112736.5 45 120394.0 46 129337.0 47 137010.0 48 140489.0 49 139783.5 50 138132.0 51 137387.0 52 135595.0 53 133885.5 54 130496.5 55 123851.0 56 114990.5 57 105853.0 58 96388.0 59 85198.5 60 73887.0 61 62191.0 62 50029.0 63 38086.5 64 27866.5 65 20938.0 66 15924.0 67 12066.5 68 9065.5 69 6801.0 70 5011.0 71 3726.0 72 2859.5 73 2086.0 74 1566.0 75 1144.5 76 763.5 77 462.5 78 267.5 79 163.5 80 100.5 81 52.0 82 30.0 83 22.0 84 18.0 85 15.0 86 12.0 87 8.5 88 7.0 89 8.0 90 5.0 91 3.5 92 3.5 93 2.5 94 2.0 95 3.0 96 3.5 97 2.5 98 0.5 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.5118282193139161 2 0.05367818534287146 3 0.06276117699832374 4 0.060334673812390646 5 0.07269672382721198 6 0.07082766056237162 7 0.04859564488584942 8 0.02311736143355185 9 0.015280411954659805 10-11 0.01762493868160868 12-13 0.013722859233959503 14-15 0.018461098563247787 16-17 0.016919941134344335 18-19 0.059810024474891595 20-21 0.09091189301350709 22-23 0.10884834223925584 24-25 0.07691031381900122 26-27 0.09310886211428437 28-29 0.09499432067092156 30-31 0.06479419318113257 32-33 0.0382338204702432 34-35 0.42885164753008204 36-37 0.6715019661233923 38-39 0.6170204114824754 40-41 0.6113968263961574 42-43 0.5835412256333173 44-45 0.5678181408001427 46-47 0.5566857376700848 48-49 0.5463075179626817 50-51 0.5604074689079687 52-53 0.645990892087501 54-55 0.6146758847555265 56-57 0.5701298769434979 58-59 0.5470780966771335 60-61 0.5605222359505465 62-63 0.5724088225032594 64-65 0.5918536385743179 66-67 0.6199387734223138 68-69 0.5708512697825591 70-71 0.5183043595736699 72-73 0.4999580280530001 74-75 0.48005414381162986 76-77 0.49500664993035276 78-79 0.4887764390475516 80-81 0.4853498230620109 82-83 0.5059587048506455 84-85 0.4708727804053965 86-87 0.47469288339406146 88-89 0.5028763899928386 90-91 0.4840381997182633 92-93 0.4789064733858507 94-95 0.4906455023123919 96-97 0.485136684268652 98 0.4785129863827265 >>END_MODULE >>Sequence Length Distribution pass #Length Count 98 3049656.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.562104994100075 #Duplication Level Percentage of deduplicated Percentage of total 1 76.18890548976465 45.37971588166929 2 13.867677144511447 16.519760842113456 3 4.387228189314354 7.839376381350513 4 1.906086051789848 4.541219901779864 5 0.9775289119162357 2.9111839843161613 6 0.5837218812995947 2.086062238879205 7 0.39850191962423587 1.6614929223906414 8 0.29013091685835635 1.382464650556155 9 0.21783076475910235 1.167701299337409 >10 1.1037597786388567 11.703308936091245 >50 0.05986764723780516 2.3869318344617296 >100 0.018098515030621456 1.794312079848677 >500 3.866270654862584E-4 0.16040871058165995 >1k 2.2092975152507676E-4 0.2976246110989411 >5k 5.523243788126919E-5 0.1684357255252104 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5120 0.1678877879996957 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3523 0.11552122600057187 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3063 0.10043755754747422 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 6.558116718738113E-5 0.0 5 3.279058359369057E-5 3.279058359369057E-5 0.0 6.558116718738113E-5 0.0 6 3.279058359369057E-5 3.279058359369057E-5 0.0 6.558116718738113E-5 0.0 7 3.279058359369057E-5 3.279058359369057E-5 0.0 6.558116718738113E-5 0.0 8 3.279058359369057E-5 3.279058359369057E-5 0.0 6.558116718738113E-5 0.0 9 3.279058359369057E-5 3.279058359369057E-5 0.0 6.558116718738113E-5 0.0 10-11 6.558116718738113E-5 3.279058359369057E-5 0.0 6.558116718738113E-5 0.0 12-13 9.83717507810717E-5 4.9185875390535854E-5 0.0 8.197645898422641E-5 4.9185875390535854E-5 14-15 9.83717507810717E-5 1.1476704257791699E-4 0.0 1.1476704257791699E-4 9.837175078107171E-5 16-17 1.6395291796845283E-4 1.6395291796845283E-4 0.0 1.9674350156214342E-4 1.3116233437476227E-4 18-19 1.967435015621434E-4 2.2953408515583398E-4 0.0 2.6232466874952454E-4 1.3116233437476227E-4 20-21 1.967435015621434E-4 2.2953408515583398E-4 0.0 2.6232466874952454E-4 1.4755762617160755E-4 22-23 1.967435015621434E-4 2.2953408515583398E-4 0.0 3.1151054414006035E-4 1.803482097652981E-4 24-25 2.4592937695267923E-4 2.2953408515583398E-4 0.0 4.918587539053585E-4 1.967435015621434E-4 26-27 2.951152523432151E-4 2.2953408515583398E-4 0.0 7.377881308580378E-4 2.2953408515583398E-4 28-29 2.951152523432151E-4 2.6232466874952454E-4 0.0 0.001787086805856136 2.2953408515583398E-4 30-31 3.1151054414006035E-4 2.6232466874952454E-4 0.0 0.005820328587880076 2.4592937695267923E-4 32-33 3.2790583593690566E-4 2.6232466874952454E-4 0.0 0.013263791063647834 2.6232466874952454E-4 34-35 3.2790583593690566E-4 2.951152523432151E-4 0.0 0.022904222640192862 2.6232466874952454E-4 36-37 3.2790583593690566E-4 2.951152523432151E-4 0.0 0.037135335919854566 2.6232466874952454E-4 38-39 3.2790583593690566E-4 2.951152523432151E-4 0.0 0.060121535019031655 2.6232466874952454E-4 40-41 3.2790583593690566E-4 2.951152523432151E-4 0.0 0.0830585482428182 2.6232466874952454E-4 42-43 3.2790583593690566E-4 3.2790583593690566E-4 0.0 0.10556928387988679 2.7871996054636985E-4 44-45 4.098822949211321E-4 3.2790583593690566E-4 0.0 0.1316869837122613 3.2790583593690566E-4 46-47 4.262775867179774E-4 3.2790583593690566E-4 0.0 0.16073944077627117 3.606964195305962E-4 48-49 4.262775867179774E-4 3.7709171132744153E-4 0.0 0.1894312014207504 3.606964195305962E-4 50-51 4.426728785148227E-4 4.918587539053585E-4 0.0 0.21759831272773061 3.606964195305962E-4 52-53 4.5906817031166796E-4 4.918587539053585E-4 0.0 0.2458637957854919 3.9348700312428684E-4 54-55 4.5906817031166796E-4 5.574399210927397E-4 0.0 0.2738997447580973 4.262775867179774E-4 56-57 4.5906817031166796E-4 6.230210882801208E-4 0.0 0.3024603430682018 4.262775867179774E-4 58-59 4.5906817031166796E-4 6.230210882801208E-4 0.0 0.3335786068986141 4.262775867179774E-4 60-61 4.5906817031166796E-4 7.541834226548831E-4 0.0 0.364746056604417 4.262775867179774E-4 62-63 4.5906817031166796E-4 7.541834226548831E-4 0.0 0.3957823439758451 4.5906817031166796E-4 64-65 4.5906817031166796E-4 7.705787144517283E-4 0.0 0.4264743302195395 4.5906817031166796E-4 66-67 4.5906817031166796E-4 7.869740062485736E-4 0.0 0.4609372335765083 5.246493374990491E-4 68-69 5.246493374990491E-4 7.869740062485736E-4 0.0 0.4946787440944159 5.246493374990491E-4 70-71 5.246493374990491E-4 8.033692980454188E-4 0.0 0.529846644998649 5.246493374990491E-4 72-73 5.246493374990491E-4 8.197645898422642E-4 0.0 0.5653916376142096 6.066257964832756E-4 74-75 5.246493374990491E-4 8.197645898422642E-4 0.0 0.6019039524457841 6.230210882801208E-4 76-77 5.246493374990491E-4 8.197645898422642E-4 0.0 0.6387769636968891 6.394163800769661E-4 78-79 5.246493374990491E-4 8.197645898422642E-4 0.0 0.6776010146718188 6.558116718738113E-4 80-81 5.246493374990491E-4 8.197645898422642E-4 0.0 0.7181301759936203 6.886022554675019E-4 82-83 5.246493374990491E-4 8.197645898422642E-4 0.0 0.7601513088689347 8.525551734359548E-4 84-85 5.246493374990491E-4 8.197645898422642E-4 0.0 0.8001230302696436 8.525551734359548E-4 86 5.246493374990491E-4 8.853457570296453E-4 0.0 0.8307166447625568 8.853457570296453E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 7220 0.0 35.38364 1 TCAACGC 8625 0.0 28.963812 4 ATCAACG 8855 0.0 28.26327 3 CAACGCA 8845 0.0 28.087933 5 TATCAAC 8955 0.0 27.947657 2 GTACCTG 3245 0.0 27.519072 1 AACGCAG 9345 0.0 26.675322 6 GGTATCA 4645 0.0 26.260735 1 TACCTGG 3610 0.0 24.3788 2 ACGCAGA 10745 0.0 23.109865 7 GTACATG 8805 0.0 22.740849 1 TACATGG 9085 0.0 22.048286 2 CGCAGAG 11620 0.0 21.285923 8 GAGTACA 7040 0.0 20.203777 1 ACATGGG 9690 0.0 20.15135 3 AGTACAT 6910 0.0 19.502378 2 GTATATA 840 0.0 19.179422 1 AGAGTAC 9400 0.0 19.14956 10-11 GCAGAGT 12860 0.0 18.841368 9 CATGGGG 7570 0.0 17.74149 4 >>END_MODULE