##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921436_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3049656 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.06284085811646 33.0 31.0 34.0 30.0 34.0 2 32.18943808744331 34.0 31.0 34.0 30.0 34.0 3 32.30963229951181 34.0 31.0 34.0 30.0 34.0 4 35.82492713932326 37.0 35.0 37.0 35.0 37.0 5 35.65195254809067 37.0 35.0 37.0 35.0 37.0 6 35.6907392178003 37.0 35.0 37.0 35.0 37.0 7 35.62895421647556 37.0 35.0 37.0 35.0 37.0 8 35.58911332950339 37.0 35.0 37.0 35.0 37.0 9 37.2436648592497 39.0 38.0 39.0 34.0 39.0 10-11 37.16195826676845 39.0 37.0 39.0 34.0 39.0 12-13 37.057343352824056 39.0 37.0 39.0 34.0 39.0 14-15 38.39332255834756 40.0 38.0 41.0 34.0 41.0 16-17 38.30983363369508 40.0 38.0 41.0 34.0 41.0 18-19 38.22373129953018 40.0 38.0 41.0 33.5 41.0 20-21 38.12817298082145 40.0 38.0 41.0 33.5 41.0 22-23 38.09491316397653 40.0 38.0 41.0 33.5 41.0 24-25 38.15011086496313 40.0 38.0 41.0 34.0 41.0 26-27 38.051138718596455 40.0 38.0 41.0 33.0 41.0 28-29 37.93158129966134 40.0 38.0 41.0 33.0 41.0 30-31 37.800678666708635 40.0 38.0 41.0 33.0 41.0 32-33 37.642221614503406 40.0 38.0 41.0 33.0 41.0 34-35 37.501042412652446 40.0 37.5 41.0 32.0 41.0 36-37 37.406465188204834 40.0 37.0 41.0 32.0 41.0 38-39 37.37740141838948 40.0 37.0 41.0 32.0 41.0 40-41 37.22597401149507 40.0 37.0 41.0 32.0 41.0 42-43 37.007495435550766 40.0 37.0 41.0 31.0 41.0 44-45 36.81016891741233 40.0 36.5 41.0 31.0 41.0 46-47 36.546873155529674 39.5 36.0 41.0 30.0 41.0 48-49 36.22916010854995 39.0 35.5 40.5 30.0 41.0 50-51 35.97745352262682 39.0 35.0 40.0 29.0 41.0 52-53 35.69593750901741 39.0 35.0 40.0 28.5 41.0 54-55 35.398317056087635 38.0 35.0 40.0 28.0 41.0 56-57 35.04331734464478 38.0 34.0 40.0 27.5 41.0 58-59 34.68719094874963 38.0 34.0 40.0 26.5 41.0 60-61 34.29115136264549 37.0 34.0 40.0 26.0 41.0 62-63 33.88413676821254 36.5 33.0 39.0 26.0 41.0 64-65 33.405754616258356 36.0 33.0 39.0 24.5 40.0 66-67 32.90234849438757 35.0 32.0 38.5 23.0 40.0 68-69 32.4216462446912 35.0 32.0 38.0 22.0 40.0 70-71 31.89518145653149 35.0 31.0 37.0 20.5 39.0 72-73 31.37821511672136 34.5 31.0 36.5 19.5 39.0 74-75 30.878163963410955 34.0 30.0 36.0 18.0 38.5 76-77 29.51013720891799 32.5 28.5 35.0 17.5 36.5 78-79 30.443630035649925 34.0 30.5 35.0 18.0 37.0 80-81 30.48412624243521 34.0 31.0 35.0 18.0 37.0 82-83 30.173551377598 34.0 30.0 35.0 15.5 36.0 84-85 29.716299477711587 34.0 30.0 35.0 8.5 36.0 86-87 29.23649191908858 34.0 29.0 35.0 4.5 35.5 88-89 28.72062865451054 34.0 29.0 35.0 2.0 35.0 90-91 28.295830251018476 33.0 28.5 35.0 2.0 35.0 92-93 27.909064005907553 33.0 27.0 35.0 2.0 35.0 94-95 27.475986144010996 33.0 27.0 35.0 2.0 35.0 96-97 26.795403317620085 33.0 25.5 34.0 2.0 35.0 98-99 25.87850580524492 32.0 24.5 34.0 2.0 35.0 100-101 22.27828417369041 28.5 10.0 32.5 2.0 34.5 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 16654.0 3 8771.0 4 5239.0 5 3891.0 6 3537.0 7 3635.0 8 4225.0 9 5034.0 10 5960.0 11 7265.0 12 8390.0 13 10212.0 14 11261.0 15 12992.0 16 14905.0 17 18131.0 18 18623.0 19 15395.0 20 14778.0 21 15413.0 22 16511.0 23 18431.0 24 21229.0 25 24960.0 26 29540.0 27 36152.0 28 44323.0 29 54101.0 30 66185.0 31 84223.0 32 108770.0 33 146898.0 34 211683.0 35 331415.0 36 540501.0 37 729716.0 38 366621.0 39 14085.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.972188416797366 17.82402952110133 13.567638650770386 24.63614341133092 2 15.921008795746145 19.24935140225652 38.79847431972655 26.031165482270787 3 19.934624876782188 22.607541356258352 28.678318059681036 28.779515707278424 4 13.817385383940216 15.292509864076715 35.30130345263193 35.58880129935115 5 15.158472751382867 35.85323649570556 33.30247724240329 15.685813510508288 6 34.51039041064877 33.853143700491586 16.67092122161069 14.965544667248961 7 30.545385573841287 30.707230208898373 19.71826826240489 19.029115954855456 8 27.643996655809318 33.81479656665716 19.2336590757127 19.307547701820823 9 26.723130093441995 16.288872624154443 19.363202825250013 37.62479445715355 10-11 26.368965466310655 25.108288052620264 26.521932494949514 22.000813986119567 12-13 26.431167453476572 22.24467463224856 27.07908350403766 24.245074410237205 14-15 23.602504546524667 23.786170197930705 24.75041896932316 27.860906286221464 16-17 23.90339108699788 26.817075490884278 25.40153120469202 23.878002217425816 18-19 23.82637522435262 26.04273225447258 26.970452782661336 23.160439738513467 20-21 24.36096903863156 25.284819629131377 26.922767218941257 23.4314441132958 22-23 24.159790395373847 25.02017447807149 26.763282187477657 24.056752939077015 24-25 24.02254977516976 25.200651373804035 26.847766384512926 23.929032466513274 26-27 23.898813721085066 25.359786555068332 26.928514970334827 23.812884753511774 28-29 23.86664167452591 25.560433177427637 26.76613997861893 23.806785169427528 30-31 24.105127486654197 25.422516633167234 26.637071086940733 23.835284793237832 32-33 23.929829186835946 25.43868235513247 26.581574070384946 24.049914387646638 34-35 24.08374834374323 25.42682275966114 26.71319789671582 23.776230999879814 36-37 24.151928456415014 25.3963329649464 26.57831392469821 23.873424653940372 38-39 24.08450196119587 25.491151661441187 26.529175248265098 23.89517112909785 40-41 24.179692483688964 25.387543952805647 26.585113392581 23.84765017092439 42-43 24.153547244675444 25.382744995163222 26.432998311226246 24.030709448935088 44-45 24.06772029165501 25.4781142318738 26.405204086685803 24.048961389785383 46-47 24.163588830118183 25.49244018184627 26.359296268976625 23.98467471905893 48-49 24.22546355776527 25.56052238252919 26.17872510383445 24.0352889558711 50-51 24.034695556347323 25.751863580175964 26.16761211363596 24.04582874984075 52-53 24.18282243271373 25.62231479592941 26.074540707546152 24.12032206381071 54-55 24.159798133158006 25.553371251682634 26.11550613454182 24.171324480617535 56-57 24.15604797647118 25.663473777080547 26.141349677237834 24.039128569210437 58-59 24.296276038733406 25.557369445426808 26.03977452239471 24.106579993445077 60-61 24.245261765777418 25.604812065974077 26.208140282623287 23.941785885625222 62-63 24.0390668286963 25.654258041316247 26.21511975210844 24.091555377879022 64-65 24.174121661648574 25.586188792757287 26.07393000511073 24.165759540483407 66-67 24.154837533005864 25.5863230301083 26.004379514395797 24.25445992249004 68-69 24.13760745763624 25.65483496613491 26.06555354647521 24.14200402975364 70-71 24.164182905195002 25.482285890250783 26.070075277772176 24.28345592678204 72-73 24.2738776693039 25.554238241302922 25.945026284054755 24.22685780533842 74-75 24.019442603164574 25.814596157704106 25.874370089544435 24.29159114958689 76-77 24.205043097670234 25.564052735330716 25.90130094846948 24.32960321852957 78-79 24.134043947205072 25.637953488494205 26.016560315789008 24.21144224851172 80-81 24.165005818980504 25.70437873362715 25.93475984732885 24.195855600063503 82-83 24.22616614015313 25.620947317650923 25.940053387701738 24.21283315449421 84-85 24.182314695303944 25.663105865229163 25.82841805207112 24.32616138739577 86-87 24.184277577568604 25.66225790640191 25.9329260425459 24.220538473483582 88-89 24.10951108790039 25.572610820482538 25.917342794340144 24.400535297276924 90-91 24.11264129905164 25.6708216391281 25.899244435046757 24.3172926267735 92-93 24.272543805502732 25.654254964027643 25.964234493928934 24.108966736540694 94-95 24.2424217580708 25.647097056852065 25.860221788765486 24.250259396311655 96-97 24.162297054898062 25.498316100830635 26.01156922350441 24.327817620766886 98-99 24.159624836542363 25.61005464301672 25.868569812295295 24.36175070814562 100-101 24.506104874471514 25.13214452315737 26.01036430847632 24.351386293894798 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 537.0 1 420.0 2 624.0 3 881.5 4 618.0 5 483.0 6 900.0 7 1972.0 8 2883.0 9 2758.0 10 1853.0 11 1121.0 12 977.5 13 1042.0 14 1114.5 15 1179.0 16 1255.0 17 1339.0 18 1468.0 19 1579.5 20 1692.5 21 1820.5 22 2031.0 23 2306.5 24 2673.0 25 3204.5 26 3980.0 27 5150.0 28 6804.5 29 9144.5 30 12345.0 31 16209.5 32 20908.5 33 26392.0 34 32370.5 35 38545.0 36 45466.5 37 52509.5 38 59225.0 39 66028.5 40 73883.0 41 81726.0 42 88928.0 43 97108.0 44 104918.0 45 112556.0 46 120509.5 47 129116.0 48 137345.5 49 140430.5 50 137778.0 51 136191.0 52 134506.5 53 131940.5 54 129582.5 55 123731.5 56 114466.0 57 104268.5 58 95641.0 59 85814.5 60 73951.5 61 62368.5 62 50938.0 63 38524.5 64 27756.0 65 20562.5 66 15496.5 67 12002.5 68 9160.0 69 6825.5 70 5074.0 71 3772.5 72 2757.0 73 2061.0 74 1560.0 75 1106.5 76 769.0 77 457.5 78 246.5 79 121.0 80 72.0 81 40.5 82 22.0 83 12.0 84 5.5 85 4.0 86 3.0 87 1.0 88 0.5 89 0.0 90 0.5 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.33456232440642486 2 0.0 3 0.005836723879676921 4 0.06495814609910101 5 4.918587539053586E-4 6 0.06367931333894708 7 0.0750576458459577 8 0.10424126524434232 9 0.09332200090764335 10-11 0.09578129467717014 12-13 0.09722408035529254 14-15 0.06553198131199059 16-17 0.03528266794681105 18-19 0.038119053427665285 20-21 0.027560485510496925 22-23 0.04098822949211321 24-25 0.0335283717245486 26-27 0.020526905329650295 28-29 0.02287143205659917 30-31 0.003328244234759593 32-33 0.005066145165225193 34-35 0.007689391852720438 36-37 0.010689730251543125 38-39 0.016264129462470522 40-41 0.021215507585117796 42-43 0.0034758018609312 44-45 0.014329485030442778 46-47 0.02318294260073923 48-49 0.0029511525234321508 50-51 0.007099161348034008 52-53 0.002426503185933102 54-55 0.003967660614836559 56-57 0.0039184747394460226 58-59 0.001328018635544468 60-61 0.005082540457022038 62-63 0.013755649817553194 64-65 0.006246606174598053 66-67 0.03752882292297885 68-69 0.05990839622567267 70-71 0.011460308965994852 72-73 0.03097070620424074 74-75 0.04933343301670746 76-77 0.3199869099990294 78-79 0.07973030400805861 80-81 0.03318407059681486 82-83 0.027101417340185254 84-85 0.018903771441762612 86-87 0.12050539470681283 88-89 0.5435039230654212 90-91 0.130768847371638 92-93 0.05087459044561092 94-95 0.008787876403109072 96-97 0.006099048548426445 98-99 0.010443800874590445 100-101 0.008148460023032105 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3049656.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.67962526289503 #Duplication Level Percentage of deduplicated Percentage of total 1 73.7157776111245 41.78182650961444 2 15.169643805356102 17.196194525183618 3 4.922475252394629 8.370121580148068 4 2.082675782176375 4.721811315114549 5 1.0811603436800166 3.0639881564443074 6 0.6796830461922815 2.311450821343289 7 0.450796807878501 1.7885695898183906 8 0.3173281303638347 1.4388831611517803 9 0.23099544071622122 1.1783461515509435 >10 1.2553534375609061 12.690808876133802 >50 0.0703334187961382 2.6798168196274474 >100 0.02308176434003679 2.123824151338833 >500 4.0550966218393173E-4 0.15970690853669586 >1k 2.317198066809415E-4 0.31544084476464157 >5k 5.7929951670235374E-5 0.17921058922925093 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5458 0.17897100525436313 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3784 0.12407956831852511 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3224 0.10571684150605838 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 3.279058359369057E-5 0.0 4 0.0 0.0 0.0 6.558116718738113E-5 0.0 5 0.0 3.279058359369057E-5 0.0 6.558116718738113E-5 0.0 6 0.0 3.279058359369057E-5 0.0 6.558116718738113E-5 0.0 7 0.0 3.279058359369057E-5 0.0 9.83717507810717E-5 0.0 8 0.0 6.558116718738113E-5 0.0 9.83717507810717E-5 0.0 9 0.0 6.558116718738113E-5 0.0 9.83717507810717E-5 0.0 10-11 3.279058359369057E-5 6.558116718738113E-5 0.0 2.2953408515583398E-4 0.0 12-13 6.558116718738113E-5 9.83717507810717E-5 0.0 4.098822949211321E-4 3.279058359369057E-5 14-15 6.558116718738113E-5 9.83717507810717E-5 0.0 4.426728785148227E-4 3.279058359369057E-5 16-17 8.197645898422641E-5 1.1476704257791699E-4 0.0 4.5906817031166796E-4 3.279058359369057E-5 18-19 9.83717507810717E-5 1.3116233437476227E-4 0.0 4.918587539053585E-4 3.279058359369057E-5 20-21 9.83717507810717E-5 1.3116233437476227E-4 0.0 4.918587539053585E-4 3.279058359369057E-5 22-23 9.83717507810717E-5 1.3116233437476227E-4 0.0 6.722069636706566E-4 4.9185875390535854E-5 24-25 9.83717507810717E-5 1.4755762617160755E-4 0.0 8.689504652328E-4 6.558116718738113E-5 26-27 9.83717507810717E-5 1.6395291796845283E-4 0.0 0.0011312751339823245 6.558116718738113E-5 28-29 9.83717507810717E-5 1.6395291796845283E-4 0.0 0.002213364392574113 6.558116718738113E-5 30-31 9.83717507810717E-5 1.6395291796845283E-4 0.0 0.006099048548426446 6.558116718738113E-5 32-33 9.83717507810717E-5 1.6395291796845283E-4 0.0 0.013493325148803668 9.83717507810717E-5 34-35 1.1476704257791699E-4 1.6395291796845283E-4 0.0 0.023232128476129765 1.3116233437476227E-4 36-37 1.3116233437476227E-4 1.803482097652981E-4 0.0 0.03761079938196308 1.3116233437476227E-4 38-39 1.3116233437476227E-4 2.2953408515583398E-4 0.0 0.0604658361467654 1.3116233437476227E-4 40-41 1.3116233437476227E-4 2.6232466874952454E-4 0.0 0.0834520352459425 1.3116233437476227E-4 42-43 1.3116233437476227E-4 3.2790583593690566E-4 0.0 0.10606114263379214 1.3116233437476227E-4 44-45 1.3116233437476227E-4 3.2790583593690566E-4 0.0 0.1318509366302298 1.3116233437476227E-4 46-47 1.3116233437476227E-4 3.4430112773375097E-4 0.0 0.16065746431728695 1.3116233437476227E-4 48-49 1.3116233437476227E-4 3.606964195305962E-4 0.0 0.1891688767520009 1.4755762617160755E-4 50-51 1.3116233437476227E-4 3.770917113274415E-4 0.0 0.21700808222304419 1.967435015621434E-4 52-53 1.6395291796845283E-4 4.426728785148226E-4 0.0 0.245109612362837 1.967435015621434E-4 54-55 1.6395291796845283E-4 5.410446292958943E-4 0.0 0.27286684137489603 1.967435015621434E-4 56-57 1.6395291796845283E-4 5.574399210927397E-4 0.0 0.3013126726424226 2.2953408515583398E-4 58-59 1.967435015621434E-4 5.902305046864302E-4 0.0 0.33213582122049173 2.6232466874952454E-4 60-61 2.2953408515583398E-4 6.558116718738114E-4 0.0 0.36289338863137355 2.6232466874952454E-4 62-63 2.2953408515583398E-4 6.886022554675019E-4 0.0 0.39363456075045844 2.6232466874952454E-4 64-65 2.2953408515583398E-4 6.886022554675019E-4 0.0 0.42380189765665377 2.6232466874952454E-4 66-67 2.2953408515583398E-4 7.541834226548831E-4 0.0 0.4580188716366699 2.7871996054636985E-4 68-69 2.2953408515583398E-4 7.541834226548831E-4 0.0 0.49151445277762473 2.951152523432151E-4 70-71 2.2953408515583398E-4 7.541834226548831E-4 0.0 0.5257970079248282 2.951152523432151E-4 72-73 2.2953408515583398E-4 7.541834226548831E-4 0.0 0.5604566547833592 4.426728785148227E-4 74-75 2.2953408515583398E-4 7.869740062485736E-4 0.0 0.596821411988762 4.5906817031166796E-4 76-77 2.2953408515583398E-4 8.197645898422642E-4 0.0 0.633071402151587 4.5906817031166796E-4 78-79 2.2953408515583398E-4 8.197645898422642E-4 0.0 0.6714363849562048 4.5906817031166796E-4 80-81 2.2953408515583398E-4 8.197645898422642E-4 0.0 0.711473687524101 5.082540457022038E-4 82-83 2.2953408515583398E-4 8.525551734359547E-4 0.0 0.7530193569373069 6.558116718738113E-4 84-85 2.2953408515583398E-4 8.853457570296453E-4 0.0 0.7920073608302052 6.558116718738113E-4 86-87 2.2953408515583398E-4 8.853457570296453E-4 0.0 0.8330775667813026 6.722069636706566E-4 88-89 2.2953408515583398E-4 8.853457570296453E-4 0.0 0.8775088075507533 6.886022554675019E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 7440 0.0 32.917202 1 GGTATCA 4910 0.0 30.664675 1 GTACCTG 3085 0.0 29.03591 1 TCAACGC 9070 0.0 26.708677 4 TACCTGG 3255 0.0 26.411657 2 CAACGCA 9260 0.0 26.145197 5 TATCAAC 9435 0.0 25.82519 2 ATCAACG 9530 0.0 25.369228 3 GTACATG 9005 0.0 24.868345 1 AACGCAG 9835 0.0 24.810106 6 TACATGG 9410 0.0 23.016712 2 ACGCAGA 11155 0.0 21.91754 7 GAGTACA 6960 0.0 21.838066 1 ACATGGG 9975 0.0 21.570868 3 AGTACAT 6835 0.0 20.638876 2 CGCAGAG 11850 0.0 20.632078 8 AGAGTAC 9670 0.0 20.201649 10-11 CATGGGG 7240 0.0 19.944563 4 ACCTGGG 4275 0.0 19.777264 3 TATCACG 255 2.6800808E-7 18.626356 2 >>END_MODULE