##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921435_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4520728 Sequences flagged as poor quality 0 Sequence length 98 %GC 49 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.537166359046594 31.0 31.0 34.0 27.0 34.0 2 30.64491913691777 31.0 31.0 34.0 27.0 34.0 3 30.779067442234968 31.0 31.0 34.0 27.0 34.0 4 34.283288886214784 37.0 35.0 37.0 30.0 37.0 5 34.28140688844805 37.0 35.0 37.0 30.0 37.0 6 34.378187760909306 37.0 35.0 37.0 31.0 37.0 7 34.272387323457636 37.0 35.0 37.0 30.0 37.0 8 34.2553126399111 37.0 35.0 37.0 30.0 37.0 9 35.734851997288935 39.0 37.0 39.0 30.0 39.0 10-11 35.618465433001056 39.0 37.0 39.0 30.0 39.0 12-13 35.47274377047236 39.0 35.5 39.0 30.0 39.0 14-15 36.52494830478631 40.0 37.0 41.0 30.0 41.0 16-17 36.388311572826325 40.0 36.5 41.0 30.0 41.0 18-19 36.217155290032935 40.0 36.0 41.0 29.0 41.0 20-21 36.10933338612719 39.0 36.0 41.0 28.5 41.0 22-23 36.15338491942006 40.0 36.5 41.0 28.5 41.0 24-25 36.036131791162845 40.0 36.0 41.0 28.0 41.0 26-27 35.78408035166018 39.0 36.0 41.0 27.0 41.0 28-29 35.56060583605118 39.0 36.0 40.5 27.0 41.0 30-31 35.325263873429236 39.0 35.0 40.0 25.5 41.0 32-33 35.06826312045317 39.0 35.0 40.0 25.0 41.0 34-35 34.660056190064964 38.0 34.5 40.0 23.5 41.0 36-37 34.29892596944563 38.0 34.0 40.0 22.5 41.0 38-39 34.076589102463146 38.0 33.5 40.0 20.5 41.0 40-41 33.822838157925005 38.0 33.0 40.0 18.5 41.0 42-43 33.545017638751986 38.0 33.0 40.0 17.0 41.0 44-45 33.242026726668804 38.0 33.0 40.0 15.0 41.0 46-47 32.966485707611696 38.0 32.0 40.0 13.5 41.0 48-49 32.766147178065125 38.0 32.0 40.0 9.0 41.0 50-51 31.99868516752169 36.0 31.0 39.0 10.0 40.0 52-53 32.485966419567816 37.0 32.0 39.0 9.0 40.0 54-55 32.926447908389974 38.0 33.0 40.0 8.5 41.0 56-57 32.781998386100646 37.0 32.5 40.0 8.0 41.0 58-59 32.45824123902168 37.0 32.0 40.0 6.5 41.0 60-61 32.01000071227466 36.0 31.0 39.0 2.0 41.0 62-63 31.534675388565734 35.5 31.0 39.0 2.0 40.0 64-65 30.998381234172903 35.0 30.5 38.5 2.0 40.0 66-67 30.513195994096527 35.0 30.0 38.0 2.0 40.0 68-69 29.999194488144386 34.5 29.0 37.5 2.0 39.5 70-71 29.482219677892587 34.0 29.0 37.0 2.0 39.0 72-73 28.93198783470273 34.0 28.0 36.0 2.0 39.0 74-75 28.341816074756103 34.0 27.0 35.5 2.0 38.0 76-77 27.75821560155798 33.0 26.0 35.0 2.0 37.0 78-79 27.200973383048037 33.0 26.0 35.0 2.0 36.5 80-81 26.624785653992014 32.5 25.0 35.0 2.0 36.0 82-83 26.00606240853243 32.0 23.5 34.5 2.0 35.5 84-85 25.388712061420197 31.5 20.5 34.0 2.0 35.0 86-87 24.77435647532875 31.0 18.5 34.0 2.0 35.0 88-89 24.126369248492722 31.0 13.5 34.0 2.0 35.0 90-91 23.386415307446057 30.5 4.5 34.0 2.0 35.0 92-93 22.573712021603598 30.0 2.0 34.0 2.0 35.0 94-95 21.65610549893734 29.0 2.0 34.0 2.0 35.0 96-97 20.753306104680483 29.0 2.0 33.5 2.0 34.5 98 20.12097166651035 27.0 2.0 33.0 2.0 34.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 129253.0 3 22444.0 4 17100.0 5 14752.0 6 13791.0 7 14231.0 8 16198.0 9 18888.0 10 20858.0 11 23166.0 12 25881.0 13 30242.0 14 24942.0 15 24822.0 16 27757.0 17 31720.0 18 35723.0 19 35074.0 20 36254.0 21 39584.0 22 43212.0 23 48250.0 24 53778.0 25 60650.0 26 69341.0 27 80284.0 28 93186.0 29 108881.0 30 129589.0 31 157821.0 32 198611.0 33 257737.0 34 352863.0 35 500512.0 36 691042.0 37 737797.0 38 320810.0 39 13684.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.25840261551297 17.38474934704431 13.93231490993113 24.42453312751159 2 15.745311001247803 18.836312080847357 38.99467990692161 26.423697010983233 3 20.289051194412338 22.323711131189032 27.463272091747726 29.923965582650908 4 13.916639073873727 14.969274613509075 34.87789525126558 36.23619106135161 5 15.750387489136802 35.78174964903511 32.50939780137269 15.95846506045539 6 34.885194750229495 33.21911357052528 16.63163705917757 15.264054620067661 7 31.16058648098133 30.323382490021274 19.130653395334672 19.385377633662728 8 27.89818886289406 33.37335072091036 18.8144262608464 19.91403415534918 9 26.877187036307376 16.74586474948237 18.93933343524846 37.437614778961795 10-11 26.57356844616349 25.026695494371353 25.927102190673253 22.47263386879191 12-13 26.817698427464737 22.04489538296602 26.541026376762026 24.59637981280722 14-15 23.938521416187523 23.576097286260417 24.158489179322785 28.326892118229267 16-17 24.262733857865655 26.78136953400605 24.6662381293561 24.289658478772193 18-19 24.276698809943287 26.09754003006571 26.13716948525311 23.4885916747379 20-21 24.978261536164116 25.159962437705673 25.944838599585747 23.91693742654447 22-23 24.610799366782942 24.91380068188859 25.893420419500764 24.581979531827706 24-25 24.410189694266226 25.225100483084727 25.93880321696399 24.42590660568505 26-27 24.504498181564976 25.21748102053764 25.949681606435377 24.328339191462007 28-29 24.36797952604041 25.48125882791718 25.824993388229757 24.325768257812655 30-31 24.587429288572345 25.266911949020816 25.752312041651887 24.39334672075495 32-33 24.44379337982348 25.305603291279184 25.70047226280312 24.55013106609422 34-35 24.61756590716471 25.339724533057513 25.769530085999982 24.273179473777795 36-37 24.637737145058214 25.335561335844105 25.640772445947096 24.385929073150585 38-39 24.62631532333043 25.35303382778171 25.654696443647886 24.365954405239975 40-41 24.71376279483756 25.274721851357366 25.65320427236315 24.358311081441922 42-43 24.64850659096718 25.202738671048706 25.598127741323808 24.550626996660306 44-45 24.658155502130015 25.258914803167364 25.56711255417899 24.515817140523627 46-47 24.785585176857687 25.341052700638777 25.50640417259491 24.366957949908624 48-49 24.67659522045383 25.377685459359984 25.34655356598049 24.599165754205696 50-51 24.538136193526533 25.54258585906212 25.398934188674982 24.520343758736363 52-53 24.712472319022865 25.5666440844874 25.358462880361976 24.36242071612776 54-55 24.54212311567014 25.29040314973456 25.519294304936157 24.64817942965914 56-57 24.682957057475825 25.42283420948706 25.46331570349441 24.430893029542705 58-59 24.76204633811646 25.379359389137935 25.455799424904086 24.402794847841523 60-61 24.80113309709722 25.231304331581022 25.4969865550917 24.470576016230055 62-63 24.589954445561556 25.414772272294538 25.490722286975164 24.50455099516874 64-65 24.590840837082844 25.345770930936585 25.520156701360282 24.543231530620293 66-67 24.621075227276975 25.491851142371125 25.378279415600197 24.508794214751706 68-69 24.639743443882853 25.377700388034903 25.387097925791036 24.59545824229121 70-71 24.606850654713515 25.20687595357015 25.543186237599834 24.6430871541165 72-73 24.727795963611733 25.186850275054717 25.434520661945093 24.650833099388453 74-75 24.49422778602924 25.46234324430904 25.4217976871143 24.621631282547423 76-77 24.65393891028111 25.246337129552465 25.432160313142237 24.667563647024192 78-79 24.674639602157765 25.155618259209078 25.487779455011612 24.681962683621546 80-81 24.629088658803123 25.295755103229123 25.36614983488074 24.70900640308701 82-83 24.732227544513524 25.256113503289512 25.368201713877088 24.643457238319876 84-85 24.72083610122374 25.31057869102699 25.362486704959935 24.606098502789333 86-87 24.69257705073073 25.245769476231022 25.464362092658206 24.59729138038004 88-89 24.635575317546266 25.13520055693961 25.369681555732193 24.859542569781937 90-91 24.702980963379645 25.095309777751456 25.326015610702076 24.875693648166827 92-93 24.657255703367763 25.315577201329177 25.435534649546693 24.591632445756368 94-95 24.775650218479544 25.15429030792275 25.381198768766843 24.688860704830866 96-97 24.730592066846306 25.18808467930347 25.365587945956957 24.715735307893272 98 24.793463178489237 25.231537243740114 25.22207041718927 24.75292916058138 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 706.0 1 519.0 2 428.5 3 560.0 4 520.0 5 484.5 6 827.0 7 1648.5 8 2356.5 9 2417.0 10 2019.5 11 1783.5 12 1903.0 13 2142.0 14 2538.0 15 2961.5 16 3207.5 17 3291.0 18 3322.5 19 3232.5 20 3096.0 21 2949.0 22 2758.5 23 2808.0 24 3002.0 25 3359.0 26 4129.0 27 5182.5 28 6615.5 29 8901.0 30 12151.0 31 16724.0 32 23209.5 33 31178.5 34 40797.5 35 52772.0 36 65272.0 37 77731.0 38 90034.0 39 102028.0 40 114404.0 41 127406.5 42 142254.0 43 157821.0 44 171367.0 45 183187.0 46 198269.5 47 214588.5 48 219530.5 49 215096.0 50 212812.0 51 210803.0 52 208539.5 53 208362.0 54 205347.0 55 197096.0 56 183900.0 57 169649.5 58 154402.0 59 137664.5 60 119247.0 61 98034.0 62 77445.5 63 57841.0 64 41410.5 65 30098.0 66 22458.5 67 16875.5 68 12534.5 69 9370.5 70 6992.0 71 5171.0 72 3807.0 73 2647.5 74 1985.5 75 1455.0 76 953.0 77 567.5 78 337.5 79 211.5 80 119.0 81 66.5 82 47.0 83 31.0 84 22.5 85 14.5 86 11.0 87 13.0 88 10.0 89 8.5 90 6.5 91 5.0 92 7.0 93 6.5 94 4.5 95 2.5 96 3.0 97 4.0 98 2.5 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.4941018349257022 2 0.0527791099132706 3 0.06136179836521905 4 0.058397674002948194 5 0.07038689343840196 6 0.06903755324363686 7 0.04680662052660545 8 0.022695459669327595 9 0.013869447575700196 10-11 0.01704371508305742 12-13 0.012719190360490611 14-15 0.016534947468637796 16-17 0.015517412239798547 18-19 0.058043748705960636 20-21 0.08769605249420005 22-23 0.10487248956362781 24-25 0.07301921283474697 26-27 0.09001868725568095 28-29 0.09205375771335944 30-31 0.06205858879366332 32-33 0.03614462095485506 34-35 0.4160502467744133 36-37 0.6505699966907984 38-39 0.5964968474104171 40-41 0.5912322086177271 42-43 0.5620554919473146 44-45 0.5475003141087011 46-47 0.5363184867570002 48-49 0.5249596967568055 50-51 0.5405102894931967 52-53 0.6248440516660149 54-55 0.5947935819186645 56-57 0.5496128057250956 58-59 0.5251145390742377 60-61 0.5392715509537402 62-63 0.5531852391915638 64-65 0.5708925642064729 66-67 0.5992840091241941 68-69 0.5501215733395152 70-71 0.4977295692198248 72-73 0.48233381880086573 74-75 0.461242083133513 76-77 0.47688115719415103 78-79 0.4701897570479799 80-81 0.4667721658989437 82-83 0.4875099762693088 84-85 0.4525709133573177 86-87 0.45514793192600833 88-89 0.48346195568501354 90-91 0.4658209916632896 92-93 0.4600807657527726 94-95 0.4719704436984486 96-97 0.4665730829193882 98 0.4601913674080812 >>END_MODULE >>Sequence Length Distribution pass #Length Count 98 4520728.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.0132872282542 #Duplication Level Percentage of deduplicated Percentage of total 1 73.62351536239214 39.0302456666028 2 14.154479443699216 15.007509686304926 3 4.994358348139698 7.94302060892277 4 2.3140405365118872 4.906995824797125 5 1.2896217436058157 3.418354395478855 6 0.7788780747788797 2.4774532256425443 7 0.5451216738303855 2.022908430838185 8 0.388829175876975 1.6490490226793157 9 0.28797778245743005 1.3739984007094301 >10 1.4919908686855556 14.183694799991917 >50 0.08968672086484124 3.239180425369248 >100 0.03952728314547436 3.5930670119025487 >500 0.0013433098430101291 0.4953104923359637 >1k 6.296761685931151E-4 0.6592120084243539 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4876 0.10785873425696038 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 2.2120331061722803E-5 2.2120331061722803E-5 3 0.0 0.0 0.0 2.2120331061722803E-5 2.2120331061722803E-5 4 0.0 0.0 0.0 2.2120331061722803E-5 2.2120331061722803E-5 5 0.0 0.0 0.0 4.424066212344561E-5 2.2120331061722803E-5 6 0.0 0.0 0.0 4.424066212344561E-5 2.2120331061722803E-5 7 0.0 0.0 0.0 4.424066212344561E-5 2.2120331061722803E-5 8 0.0 0.0 0.0 4.424066212344561E-5 2.2120331061722803E-5 9 0.0 0.0 0.0 4.424066212344561E-5 4.424066212344561E-5 10-11 0.0 0.0 0.0 6.636099318516841E-5 4.424066212344561E-5 12-13 0.0 0.0 0.0 6.636099318516841E-5 1.1060165530861401E-4 14-15 1.1060165530861402E-5 0.0 0.0 6.636099318516841E-5 1.5484231743205962E-4 16-17 2.2120331061722803E-5 0.0 0.0 6.636099318516841E-5 1.7696264849378243E-4 18-19 2.2120331061722803E-5 0.0 0.0 6.636099318516841E-5 2.322634761480894E-4 20-21 3.3180496592584203E-5 0.0 0.0 7.742115871602981E-5 2.9862446933325785E-4 22-23 4.424066212344561E-5 0.0 0.0 8.848132424689121E-5 3.2074480039498063E-4 24-25 4.424066212344561E-5 1.1060165530861402E-5 0.0 1.5484231743205962E-4 3.31804965925842E-4 26-27 4.424066212344561E-5 2.2120331061722803E-5 0.0 2.1014314508636662E-4 3.871057935801491E-4 28-29 4.424066212344561E-5 2.2120331061722803E-5 0.0 4.3134645570359464E-4 4.2028629017273325E-4 30-31 4.424066212344561E-5 2.2120331061722803E-5 0.0 0.0013604003602959525 4.2028629017273325E-4 32-33 4.424066212344561E-5 2.2120331061722803E-5 0.0 0.0035060724732830645 4.7558711782704025E-4 34-35 4.424066212344561E-5 2.2120331061722803E-5 0.0 0.006879422960195791 5.087676144196245E-4 36-37 4.424066212344561E-5 2.2120331061722803E-5 0.0 0.011679534800589638 5.087676144196245E-4 38-39 5.5300827654307003E-5 2.2120331061722803E-5 0.0 0.018603198422908876 5.308879454813473E-4 40-41 6.636099318516841E-5 2.2120331061722803E-5 0.0 0.026942563233178375 5.308879454813473E-4 42-43 6.636099318516841E-5 2.2120331061722803E-5 0.0 0.03500542390517633 5.419481110122086E-4 44-45 6.636099318516841E-5 2.2120331061722803E-5 0.0 0.04403051897835924 5.640684420739314E-4 46-47 6.636099318516841E-5 2.2120331061722803E-5 0.0 0.054283292425467755 6.083091041973771E-4 48-49 6.636099318516841E-5 2.2120331061722803E-5 0.0 0.06403835842368752 6.414896007899613E-4 50-51 6.636099318516841E-5 2.2120331061722803E-5 0.0 0.07423583104314171 6.414896007899613E-4 52-53 6.636099318516841E-5 2.2120331061722803E-5 0.0 0.08453284515237369 6.525497663208227E-4 54-55 6.636099318516841E-5 2.2120331061722803E-5 0.0 0.09536074720708701 6.63609931851684E-4 56-57 6.636099318516841E-5 2.2120331061722803E-5 0.0 0.10650939406219528 6.967904284442682E-4 58-59 6.636099318516841E-5 2.2120331061722803E-5 0.0 0.11800090604876029 7.078505939751297E-4 60-61 6.636099318516841E-5 2.2120331061722803E-5 0.0 0.1308085777334978 7.078505939751297E-4 62-63 6.636099318516841E-5 2.2120331061722803E-5 0.0 0.14276461667235896 7.078505939751297E-4 64-65 6.636099318516841E-5 2.2120331061722803E-5 0.0 0.1555612281915656 7.078505939751297E-4 66-67 6.636099318516841E-5 2.2120331061722803E-5 0.0 0.16965187907788304 7.078505939751297E-4 68-69 6.636099318516841E-5 2.2120331061722803E-5 0.0 0.18352132665358323 7.078505939751297E-4 70-71 6.636099318516841E-5 2.2120331061722803E-5 0.0 0.1978884816781722 7.631514216294367E-4 72-73 6.636099318516841E-5 2.2120331061722803E-5 0.0 0.21266486282740302 8.737530769380507E-4 74-75 6.636099318516841E-5 2.2120331061722803E-5 0.0 0.22797213192211518 9.290539045923577E-4 76-77 6.636099318516841E-5 2.2120331061722803E-5 0.0 0.2427263927402843 9.290539045923577E-4 78-79 8.848132424689121E-5 2.2120331061722803E-5 0.0 0.2594714833540085 9.290539045923577E-4 80-81 1.1060165530861401E-4 2.2120331061722803E-5 0.0 0.27721198886551013 9.732945667158034E-4 82-83 1.1060165530861401E-4 2.2120331061722803E-5 0.0 0.2949524943770119 0.0010838962220244173 84-85 1.2166182083947541E-4 4.424066212344561E-5 0.0 0.31348933180673555 0.0010838962220244173 86 1.3272198637033681E-4 4.424066212344561E-5 0.0 0.3271154557407568 0.0010838962220244173 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 12715 0.0 28.924128 1 GTACATG 15575 0.0 24.558556 1 TATCAAC 15200 0.0 23.825148 2 TCAACGC 15145 0.0 23.760332 4 TACATGG 15835 0.0 23.593462 2 CAACGCA 15425 0.0 23.329025 5 ATCAACG 15670 0.0 22.90577 3 AACGCAG 16150 0.0 22.276321 6 ACATGGG 16480 0.0 22.141548 3 GTATAGG 1020 0.0 21.660624 1 GTACCTG 4390 0.0 21.494099 1 TACCTGG 4650 0.0 20.1108 2 GGTATCA 9005 0.0 19.93475 1 GAGTACA 12010 0.0 19.929216 1 ACGCAGA 18205 0.0 19.581842 7 AGTACAT 11545 0.0 18.74132 2 CGCAGAG 19085 0.0 18.697147 8 AGAGTAC 13635 0.0 18.477161 10-11 CATGGGG 13005 0.0 18.399763 4 GTATATG 1340 0.0 18.205431 1 >>END_MODULE