##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921435_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4520728 Sequences flagged as poor quality 0 Sequence length 101 %GC 49 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.95943529449239 33.0 31.0 34.0 30.0 34.0 2 32.0794748102518 34.0 31.0 34.0 30.0 34.0 3 32.20526273644422 34.0 31.0 34.0 30.0 34.0 4 35.73403597827607 37.0 35.0 37.0 35.0 37.0 5 35.536634586287875 37.0 35.0 37.0 33.0 37.0 6 35.57491337678356 37.0 35.0 37.0 33.0 37.0 7 35.5102067631585 37.0 35.0 37.0 33.0 37.0 8 35.46662263246097 37.0 35.0 37.0 33.0 37.0 9 37.09700340299173 39.0 37.0 39.0 34.0 39.0 10-11 37.00926322043706 39.0 37.0 39.0 33.5 39.0 12-13 36.8954521262947 39.0 37.0 39.0 33.0 39.0 14-15 38.19950326584568 40.0 38.0 41.0 33.0 41.0 16-17 38.10401234049029 40.0 38.0 41.0 33.0 41.0 18-19 38.00908736380512 40.0 38.0 41.0 33.0 41.0 20-21 37.89897899187918 40.0 38.0 41.0 33.0 41.0 22-23 37.86743927084311 40.0 38.0 41.0 33.0 41.0 24-25 37.925728112817225 40.0 38.0 41.0 33.0 41.0 26-27 37.81747253982102 40.0 38.0 41.0 33.0 41.0 28-29 37.68776024569494 40.0 38.0 41.0 32.5 41.0 30-31 37.55791987485202 40.0 38.0 41.0 32.0 41.0 32-33 37.4029002629665 40.0 37.0 41.0 32.0 41.0 34-35 37.26057904833027 40.0 37.0 41.0 31.5 41.0 36-37 37.16209612699548 40.0 37.0 41.0 31.0 41.0 38-39 37.13081455022288 40.0 37.0 41.0 31.0 41.0 40-41 36.97943163136557 40.0 37.0 41.0 31.0 41.0 42-43 36.74955847819201 40.0 36.0 41.0 30.5 41.0 44-45 36.55278353397948 39.0 36.0 41.0 30.0 41.0 46-47 36.28271021835421 39.0 35.5 41.0 30.0 41.0 48-49 35.95302869360864 39.0 35.0 40.0 29.0 41.0 50-51 35.68218348903097 39.0 35.0 40.0 28.0 41.0 52-53 35.38154341513137 38.0 35.0 40.0 28.0 41.0 54-55 35.06084595224486 38.0 34.0 40.0 27.0 41.0 56-57 34.67978099987435 38.0 34.0 40.0 26.0 41.0 58-59 34.28971594840477 37.0 33.5 40.0 26.0 41.0 60-61 33.862508649049445 37.0 33.0 39.5 25.0 41.0 62-63 33.42994889318712 36.0 33.0 39.0 23.5 40.0 64-65 32.91812524442966 35.5 32.0 39.0 22.5 40.0 66-67 32.386264004381594 35.0 31.5 38.0 21.5 40.0 68-69 31.878697745141935 35.0 31.0 37.5 20.0 39.5 70-71 31.323596553475458 34.5 30.5 37.0 18.0 39.0 72-73 30.770073868633546 34.0 30.0 36.0 16.5 39.0 74-75 30.250265775777706 34.0 29.5 36.0 12.5 38.5 76-77 28.95061503368484 32.5 28.0 34.5 11.0 36.0 78-79 29.882936553581636 34.0 29.5 35.0 11.0 37.0 80-81 29.909655259064472 34.0 30.0 35.0 9.0 36.5 82-83 29.57416294455229 34.0 29.5 35.0 7.0 36.0 84-85 29.083188260828788 34.0 29.0 35.0 2.0 36.0 86-87 28.568972298267006 33.5 29.0 35.0 2.0 35.0 88-89 28.02532379740608 33.0 27.5 35.0 2.0 35.0 90-91 27.5503233107588 33.0 26.5 35.0 2.0 35.0 92-93 27.11149078201564 33.0 26.0 34.0 2.0 35.0 94-95 26.613144055559193 32.0 25.0 34.0 2.0 35.0 96-97 25.843038444250574 32.0 24.0 34.0 2.0 35.0 98-99 24.821695974630636 32.0 18.5 34.0 2.0 35.0 100-101 21.18255455758453 27.0 2.0 32.5 2.0 34.5 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 28948.0 3 14990.0 4 8921.0 5 6679.0 6 5847.0 7 6006.0 8 7031.0 9 8395.0 10 9888.0 11 11801.0 12 13511.0 13 16228.0 14 18196.0 15 20351.0 16 23527.0 17 27564.0 18 28206.0 19 24824.0 20 25531.0 21 26582.0 22 28340.0 23 31531.0 24 35928.0 25 42394.0 26 49964.0 27 60249.0 28 73136.0 29 90044.0 30 110494.0 31 137976.0 32 178013.0 33 238182.0 34 339786.0 35 515887.0 36 810406.0 37 1002513.0 38 430259.0 39 12600.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.63419489278034 17.818213693668902 14.284614206743198 24.262977206807555 2 15.873859254527147 19.12530459695872 38.683791637099155 26.317044511414977 3 20.308959502599624 22.550544048253464 27.75085206979904 29.389644379347867 4 14.166365638922535 15.247232315505407 34.91990448566754 35.66649755990452 5 15.798785232912941 35.75603965932724 32.60626336352186 15.838911744237953 6 34.88186163381688 33.40522612807276 16.482042959486375 15.23086927862398 7 31.20569040072502 30.336731924517007 19.185444956591923 19.272132718166045 8 28.012545621145097 33.40107767983954 18.786301499690655 19.800075199324713 9 26.74545603893549 16.789934196062127 19.01125160768091 37.45335815732147 10-11 26.533730377510807 25.12427004495199 25.96446839876414 22.37753117877306 12-13 26.86739155801009 22.001996259449076 26.62688170590732 24.50373047663351 14-15 23.90452175772328 23.530385024614493 24.335145324109806 28.22994789355242 16-17 24.218593892761195 26.774849755340025 24.838879350423497 24.167677001475283 18-19 24.23814033316261 26.094580810526697 26.275759292741164 23.391519563569528 20-21 24.868835280300424 25.096293667363796 26.23411663393449 23.800754418401297 22-23 24.536240482437808 24.859661115368556 26.137244535873133 24.466853866320506 24-25 24.384571120743782 25.18159910772341 26.127657022722804 24.306172748810003 26-27 24.356105216183284 25.19869799519846 26.204782557808432 24.24041423080982 28-29 24.305904413167873 25.45066749267791 26.066724376827068 24.176703717327154 30-31 24.512781046593464 25.216993702468077 25.960438045512074 24.309787205426385 32-33 24.331676728993216 25.251100986352814 25.966377111164007 24.450845173489967 34-35 24.571787453271448 25.27088650214766 26.03499101128343 24.122335033297464 36-37 24.50628609517451 25.370695388943254 25.905178569038533 24.2178399468437 38-39 24.530120007464586 25.301146977424054 25.960171995175674 24.208561019935683 40-41 24.58304428201644 25.23053766918974 25.88806465398082 24.298353394812995 42-43 24.527259066511068 25.236117457090945 25.857376439763186 24.3792470366348 44-45 24.502213594655824 25.19324361111661 25.81972911658752 24.484813677640044 46-47 24.6444886292671 25.324419371714836 25.766090593489345 24.26500140552872 48-49 24.555148530839865 25.378665711043418 25.623123870451114 24.4430618876656 50-51 24.47680251303804 25.521759569067065 25.60748159741617 24.393956320478715 52-53 24.62625123959849 25.575380528808346 25.463603751434817 24.33476448015835 54-55 24.535571817556193 25.30285524422975 25.612120093997227 24.54945284421683 56-57 24.616050459000736 25.421953505533914 25.62405142170885 24.337944613756505 58-59 24.758379689769953 25.378430556039444 25.53175934359396 24.331430410596642 60-61 24.736803567229433 25.302108203924227 25.607518046191082 24.35357018265526 62-63 24.518275424026918 25.429480318416747 25.645857604476348 24.406386653079988 64-65 24.56851369127922 25.356886443065797 25.602481434096003 24.47211843155898 66-67 24.59134637726251 25.50801219565628 25.45491400061872 24.445727426462486 68-69 24.63190953300137 25.380750995079882 25.473701847662415 24.513637624256333 70-71 24.600532321225398 25.25811340773855 25.622754110822015 24.518600160214042 72-73 24.716258382250423 25.211224800143118 25.50669114097736 24.565825676629093 74-75 24.461362602730784 25.531400458339466 25.446571140548212 24.560665798381535 76-77 24.59309362233297 25.254262053420913 25.54321952879906 24.60942479544706 78-79 24.567064361159478 25.18666729683263 25.660553577186164 24.58571476482173 80-81 24.56046115289995 25.34516544884785 25.528513157621056 24.565860240631142 82-83 24.61861982260893 25.361090349254983 25.465670363088357 24.55461946504773 84-85 24.624669571165985 25.40663654199975 25.47871803789655 24.489975848937718 86-87 24.54271673734531 25.399298244526136 25.543560407455345 24.514424610673206 88-89 24.563818599064486 25.24314584792312 25.474510522550354 24.718525030462033 90-91 24.592170998853657 25.24690791300283 25.43052662133492 24.73039446680859 92-93 24.605099200045856 25.482599976563392 25.504786191830757 24.407514631559994 94-95 24.62653697885627 25.311233932263427 25.470301925009192 24.591927163871112 96-97 24.520122544589874 25.35829736552138 25.585817602876865 24.53576248701188 98-99 24.62303664805641 25.33476451722874 25.45171557343847 24.59048326127638 100-101 25.01326768107924 24.73345731987754 25.65341255375927 24.59986244528395 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 287.0 1 227.5 2 257.5 3 390.0 4 333.5 5 285.0 6 601.0 7 1391.5 8 2090.5 9 2063.5 10 1512.0 11 1082.5 12 997.5 13 1039.0 14 1108.0 15 1209.0 16 1340.5 17 1465.5 18 1591.5 19 1655.0 20 1731.5 21 1886.0 22 2064.0 23 2332.0 24 2647.0 25 3134.0 26 3750.0 27 4644.0 28 6008.0 29 7972.0 30 10874.0 31 14687.0 32 20097.0 33 26792.5 34 34644.5 35 44654.0 36 56237.0 37 68274.0 38 80193.5 39 91999.0 40 104007.5 41 115829.0 42 128563.5 43 143934.5 44 159925.5 45 174352.0 46 185310.0 47 197688.0 48 214880.5 49 219837.0 50 212607.0 51 207448.5 52 205096.0 53 203404.5 54 201172.5 55 195147.5 56 182509.0 57 166948.0 58 152074.0 59 136963.0 60 117892.0 61 97207.5 62 77650.0 63 58162.5 64 41366.0 65 29894.0 66 22290.5 67 16974.0 68 12729.0 69 9281.5 70 6912.0 71 5196.0 72 3796.5 73 2702.5 74 1961.0 75 1418.0 76 960.5 77 551.0 78 309.5 79 180.5 80 102.0 81 45.5 82 20.5 83 10.5 84 3.5 85 3.0 86 1.0 87 0.5 88 1.5 89 1.5 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.32202777959656054 2 0.0 3 0.005861887731356543 4 0.06352959080926789 5 5.751286076047929E-4 6 0.0639277567683789 7 0.07445703435375894 8 0.10462916592194886 9 0.09133484695385345 10-11 0.09631192144274109 12-13 0.09469713727523532 14-15 0.06328626716758894 16-17 0.03537040936769476 18-19 0.0376819839636448 20-21 0.02698680389530182 22-23 0.04081201080887857 24-25 0.03321367708917679 26-27 0.020549787556340484 28-29 0.022463196193179505 30-31 0.003262748831604113 32-33 0.005220398130566581 34-35 0.007487732064393169 36-37 0.010473976757725746 38-39 0.01587133753678611 40-41 0.02020692242488378 42-43 0.003306989493727559 44-45 0.013084175823009038 46-47 0.0238125363879446 48-49 0.0026101990652832906 50-51 0.006702460311702008 52-53 0.002455356747851231 54-55 0.0037383359494311532 56-57 0.0032516886660732516 58-59 0.0011170767186170015 60-61 0.005419481110122086 62-63 0.0135818832718978 64-65 0.006138391869628077 66-67 0.03853361670952112 68-69 0.060808790088675985 70-71 0.011613173807404472 72-73 0.03166525391485619 74-75 0.04961590257144424 76-77 0.3098947780092056 78-79 0.07519806544432667 80-81 0.03198599871525117 82-83 0.027031044557425263 84-85 0.018669559416094047 86-87 0.11806726704194545 88-89 0.5341396341474205 90-91 0.13133946567897914 92-93 0.04770249393460522 94-95 0.007388190574615416 96-97 0.005552203096492424 98-99 0.010197472619454213 100-101 0.007631514216294367 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4520728.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.43592008195364 #Duplication Level Percentage of deduplicated Percentage of total 1 70.32935372653381 34.76796310240374 2 15.673108402192693 15.49629068813188 3 5.6940163810554445 8.444668162775754 4 2.6916938721200343 5.322654525888414 5 1.4665785523342165 3.6250830053550795 6 0.9023058950458552 2.6763793270177523 7 0.6179549803171639 2.138442111484318 8 0.4178806690722317 1.652665228803853 9 0.31973302862892794 1.4225666805774608 >10 1.7259064476926402 15.354506779707492 >50 0.11016990039339192 3.702663210156413 >100 0.04887512746547421 4.089228760275587 >500 0.0016602157752002417 0.5559978152844114 >1k 7.179307038464088E-4 0.6322600464605393 >5k 4.487066899037904E-5 0.11863055567729663 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5348 0.11829953051809355 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.2120331061722803E-5 2 0.0 0.0 0.0 0.0 2.2120331061722803E-5 3 0.0 0.0 0.0 0.0 2.2120331061722803E-5 4 0.0 0.0 0.0 0.0 2.2120331061722803E-5 5 0.0 0.0 0.0 0.0 2.2120331061722803E-5 6 0.0 0.0 0.0 0.0 2.2120331061722803E-5 7 0.0 0.0 0.0 4.424066212344561E-5 2.2120331061722803E-5 8 0.0 0.0 0.0 4.424066212344561E-5 2.2120331061722803E-5 9 0.0 0.0 0.0 6.636099318516841E-5 2.2120331061722803E-5 10-11 0.0 0.0 0.0 6.636099318516841E-5 2.2120331061722803E-5 12-13 0.0 0.0 0.0 6.636099318516841E-5 1.4378215190119823E-4 14-15 1.1060165530861402E-5 0.0 0.0 6.636099318516841E-5 1.9908297955550523E-4 16-17 2.2120331061722803E-5 0.0 0.0 6.636099318516841E-5 2.875643038023964E-4 18-19 2.2120331061722803E-5 0.0 0.0 6.636099318516841E-5 3.0968463486411924E-4 20-21 2.2120331061722803E-5 0.0 0.0 6.636099318516841E-5 4.0922612464187186E-4 22-23 2.2120331061722803E-5 0.0 0.0 8.848132424689121E-5 4.534667867653174E-4 24-25 2.2120331061722803E-5 0.0 0.0 1.3272198637033681E-4 4.8664728335790164E-4 26-27 4.424066212344561E-5 0.0 0.0 1.8802281402464382E-4 5.751286076047928E-4 28-29 6.636099318516841E-5 0.0 0.0 4.3134645570359464E-4 5.861887731356543E-4 30-31 6.636099318516841E-5 0.0 0.0 0.0013604003602959523 5.972489386665157E-4 32-33 6.636099318516841E-5 2.2120331061722803E-5 0.0 0.0035060724732830645 6.414896007899613E-4 34-35 6.636099318516841E-5 2.2120331061722803E-5 0.0 0.006813061967010623 6.414896007899613E-4 36-37 6.636099318516841E-5 2.2120331061722803E-5 0.0 0.011535752648688441 6.414896007899613E-4 38-39 6.636099318516841E-5 2.2120331061722803E-5 0.0 0.01847047643653854 6.414896007899613E-4 40-41 6.636099318516841E-5 2.2120331061722803E-5 0.0 0.026787720915746313 6.414896007899613E-4 42-43 6.636099318516841E-5 2.2120331061722803E-5 0.0 0.034883762084336856 6.525497663208227E-4 44-45 7.742115871602981E-5 2.2120331061722803E-5 0.0 0.04376507500561856 6.746700973825454E-4 46-47 8.848132424689121E-5 2.2120331061722803E-5 0.0 0.05386300613529502 7.18910759505991E-4 48-49 8.848132424689121E-5 2.2120331061722803E-5 0.0 0.06351853064373703 7.963319182220208E-4 50-51 8.848132424689121E-5 2.2120331061722803E-5 0.0 0.07357222111129004 8.184522492837437E-4 52-53 8.848132424689121E-5 2.2120331061722803E-5 0.0 0.08375863356521339 8.848132424689121E-4 54-55 8.848132424689121E-5 2.2120331061722803E-5 0.0 0.09446487379908722 9.622344011849419E-4 56-57 8.848132424689121E-5 2.2120331061722803E-5 0.0 0.10554715966101035 9.843547322466648E-4 58-59 8.848132424689121E-5 2.2120331061722803E-5 0.0 0.11676216750930382 0.0010064750633083876 60-61 8.848132424689121E-5 2.2120331061722803E-5 0.0 0.12930439522130066 0.001017535228839249 62-63 8.848132424689121E-5 2.2120331061722803E-5 0.0 0.14091756902870511 0.0010396555599009717 64-65 8.848132424689121E-5 2.2120331061722803E-5 0.0 0.15317223243689954 0.0010396555599009717 66-67 8.848132424689121E-5 2.2120331061722803E-5 0.0 0.16677623603985908 0.0010396555599009717 68-69 8.848132424689121E-5 2.2120331061722803E-5 0.0 0.18013691600113962 0.0010396555599009717 70-71 1.1060165530861401E-4 2.2120331061722803E-5 0.0 0.19391788225259293 0.0010396555599009717 72-73 1.1060165530861401E-4 4.424066212344561E-5 0.0 0.2084066990980214 0.0011170767186170015 74-75 1.1060165530861401E-4 4.424066212344561E-5 0.0 0.22309459892300532 0.001161317380740447 76-77 1.1060165530861401E-4 4.424066212344561E-5 0.0 0.2374506937820634 0.0011723775462713084 78-79 1.1060165530861401E-4 4.424066212344561E-5 0.0 0.25388609976092347 0.0012276783739256156 80-81 1.1060165530861401E-4 4.424066212344561E-5 0.0 0.2711510181545981 0.0012608588705181997 82-83 1.1060165530861401E-4 4.424066212344561E-5 0.0 0.28847123737592706 0.001459941850073705 84-85 1.1060165530861401E-4 6.636099318516841E-5 0.0 0.306510367356762 0.0014820621811354278 86-87 1.1060165530861401E-4 7.742115871602981E-5 0.0 0.3240517898887082 0.0015484231743205963 88-89 1.1060165530861401E-4 8.848132424689121E-5 0.0 0.3438052455268267 0.0016479646640983488 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 13240 0.0 29.032963 1 TCAACGC 15430 0.0 24.782253 4 CAACGCA 15695 0.0 24.440536 5 TATCAAC 15725 0.0 24.255579 2 ATCAACG 16155 0.0 23.669033 3 AACGCAG 16735 0.0 23.007034 6 GTACATG 15650 0.0 22.735897 1 TACATGG 16325 0.0 21.822012 2 GAGTACA 12330 0.0 21.479172 1 GTACCTG 4340 0.0 21.292067 1 ACATGGG 16555 0.0 20.658314 3 AGTACAT 11830 0.0 20.597733 2 ACGCAGA 19075 0.0 20.036232 7 GGTATCA 9510 0.0 19.634115 1 CGTATAC 195 1.0337853E-5 19.487087 3 TACCTGG 4645 0.0 19.122412 2 CGCAGAG 20065 0.0 18.929342 8 AGAGTAC 14575 0.0 18.85994 10-11 CATGGGG 12755 0.0 18.695372 4 GTATATA 1075 0.0 18.610012 1 >>END_MODULE