##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921434_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 5428266 Sequences flagged as poor quality 0 Sequence length 101 %GC 49 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.952901534302114 33.0 31.0 34.0 30.0 34.0 2 32.07159763357212 34.0 31.0 34.0 30.0 34.0 3 32.196757307029536 34.0 31.0 34.0 30.0 34.0 4 35.726108668956165 37.0 35.0 37.0 35.0 37.0 5 35.532996909141886 37.0 35.0 37.0 33.0 37.0 6 35.571348935369045 37.0 35.0 37.0 33.0 37.0 7 35.508206856480506 37.0 35.0 37.0 33.0 37.0 8 35.463423126280105 37.0 35.0 37.0 33.0 37.0 9 37.093638189432866 39.0 37.0 39.0 34.0 39.0 10-11 37.006886453243084 39.0 37.0 39.0 33.5 39.0 12-13 36.89248399028345 39.0 37.0 39.0 33.0 39.0 14-15 38.19350359764978 40.0 38.0 41.0 33.0 41.0 16-17 38.10292476455649 40.0 38.0 41.0 33.0 41.0 18-19 38.00712649306426 40.0 38.0 41.0 33.0 41.0 20-21 37.899165313564225 40.0 38.0 41.0 33.0 41.0 22-23 37.86763047352506 40.0 38.0 41.0 33.0 41.0 24-25 37.91749123937552 40.0 38.0 41.0 33.0 41.0 26-27 37.80802433042153 40.0 38.0 41.0 33.0 41.0 28-29 37.68019557258248 40.0 38.0 41.0 32.5 41.0 30-31 37.544516149355985 40.0 38.0 41.0 32.0 41.0 32-33 37.38664860933491 40.0 37.0 41.0 32.0 41.0 34-35 37.242195113504025 40.0 37.0 41.0 31.5 41.0 36-37 37.14678352166235 40.0 37.0 41.0 31.0 41.0 38-39 37.114495678730556 40.0 37.0 41.0 31.0 41.0 40-41 36.956544041872675 40.0 37.0 41.0 31.0 41.0 42-43 36.72735584438935 40.0 36.0 41.0 30.5 41.0 44-45 36.52361140739971 39.0 36.0 41.0 30.0 41.0 46-47 36.247898960736265 39.0 35.5 40.5 30.0 41.0 48-49 35.91373294897487 39.0 35.0 40.0 29.0 41.0 50-51 35.642820653962055 39.0 35.0 40.0 28.0 41.0 52-53 35.340646165829014 38.0 35.0 40.0 28.0 41.0 54-55 35.02176090854796 38.0 34.0 40.0 27.0 41.0 56-57 34.6383712588882 38.0 34.0 40.0 26.0 41.0 58-59 34.25150315036146 37.0 33.5 40.0 26.0 41.0 60-61 33.825038235045966 37.0 33.0 39.5 25.0 41.0 62-63 33.390136095025554 36.0 32.5 39.0 23.5 40.0 64-65 32.8749108831439 35.5 32.0 39.0 22.5 40.0 66-67 32.34746445734236 35.0 31.5 38.0 21.5 40.0 68-69 31.84073965793128 35.0 31.0 37.5 20.0 39.5 70-71 31.28495232179116 34.5 30.5 37.0 18.0 39.0 72-73 30.73817587421103 34.0 30.0 36.0 16.0 39.0 74-75 30.220438165705218 34.0 29.0 36.0 12.5 38.0 76-77 28.921447014571505 32.5 28.0 34.5 11.0 36.0 78-79 29.859526320191385 34.0 29.5 35.0 11.0 37.0 80-81 29.889233873211076 34.0 30.0 35.0 9.0 36.5 82-83 29.55770710204695 34.0 29.5 35.0 7.0 36.0 84-85 29.07318884151956 34.0 29.0 35.0 2.0 36.0 86-87 28.563840552397394 33.5 29.0 35.0 2.0 35.0 88-89 28.020918282191772 33.0 27.5 35.0 2.0 35.0 90-91 27.549070366116915 33.0 26.5 35.0 2.0 35.0 92-93 27.11978862126506 33.0 26.0 34.0 2.0 35.0 94-95 26.63071770985431 32.0 25.0 34.0 2.0 35.0 96-97 25.866416273631394 32.0 24.5 34.0 2.0 35.0 98-99 24.85233866579125 32.0 18.5 34.0 2.0 35.0 100-101 21.22479167380523 27.5 2.0 32.5 2.0 34.5 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 35620.0 3 18165.0 4 10722.0 5 7927.0 6 7058.0 7 7155.0 8 8431.0 9 10067.0 10 11897.0 11 14139.0 12 16494.0 13 19500.0 14 22083.0 15 24703.0 16 28562.0 17 33471.0 18 34322.0 19 30335.0 20 30019.0 21 31537.0 22 34070.0 23 37515.0 24 43006.0 25 50616.0 26 59611.0 27 72121.0 28 87998.0 29 107790.0 30 132708.0 31 165652.0 32 213713.0 33 287928.0 34 410657.0 35 624234.0 36 975050.0 37 1199173.0 38 509414.0 39 14803.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.7188521761823 17.75069025379568 14.307451672993338 24.223005897028678 2 15.934517578910098 19.16787055019043 38.50883504971937 26.388776821180098 3 20.37378993591462 22.322973001603746 27.813902760083753 29.48933430239788 4 14.228634494169947 15.278510276166385 34.75114093088752 35.741714298776145 5 15.829603921855433 35.77062723932791 32.52077512316591 15.878993715650743 6 35.006107202886334 33.30552863159206 16.337514300219254 15.350849865302349 7 31.18564911706275 30.336744732095315 19.1822045334879 19.295401617354035 8 27.871168838066446 33.284868951611045 18.838296967527572 20.005665242794933 9 26.82177832604058 16.700097175278756 19.03075496156321 37.44736953711745 10-11 26.669974811812363 25.00375024536793 25.82737512236126 22.498899820458444 12-13 26.981522411387644 22.045676914742057 26.492070259240176 24.480730414630123 14-15 23.971958809408903 23.57771828074888 24.29426954390759 28.156053365934625 16-17 24.22587987870497 26.750522250675346 24.85676403889336 24.166833831726322 18-19 24.25092073021499 26.10014913028222 26.28197307546007 23.36695706404272 20-21 24.885257640752993 25.09817619215132 26.222749898972182 23.793816268123507 22-23 24.62786206520324 24.795327015562272 26.172809858767508 24.404001060466985 24-25 24.452758769547454 25.022383717314174 26.216338616323686 24.30851889681468 26-27 24.41032253642246 25.129005908705555 26.309291355180697 24.15138019969129 28-29 24.319487091795445 25.444606311922602 26.103495600464054 24.1324109958179 30-31 24.521376171372296 25.150022885588548 25.96043708572548 24.368163857313675 32-33 24.370924737204994 25.1953984448081 25.956155618675382 24.477521199311525 34-35 24.631649558335045 25.154060654442162 26.032278006604315 24.182011780618478 36-37 24.566393689233905 25.209753638619247 26.0235456162922 24.20030705585465 38-39 24.510591592337725 25.285383253419297 26.003914032783133 24.200111121459848 40-41 24.623692844990988 25.231203344518455 25.86011550447574 24.284988306014814 42-43 24.581830340858428 25.217434958346075 25.75581331083297 24.44492138996253 44-45 24.587688219377828 25.0947931326833 25.838260193296094 24.47925845464278 46-47 24.691525002724855 25.24583793118666 25.792319498881362 24.270317567207126 48-49 24.671960036193067 25.337329566645785 25.64475692881401 24.34595346834714 50-51 24.490246164928568 25.476057344830792 25.65837580706226 24.375320683178376 52-53 24.711251875760908 25.502684579893575 25.4497197515793 24.336343792766222 54-55 24.63467155143771 25.229500998198883 25.572820987517286 24.56300646284612 56-57 24.715232027209723 25.321102320267492 25.532209070294826 24.43145658222796 58-59 24.806326150962068 25.23575042767416 25.55802128072705 24.399902140636726 60-61 24.791864868668988 25.2233342004479 25.695011978708777 24.289788952174334 62-63 24.489354471309984 25.346373170527908 25.677027545042353 24.48724481311975 64-65 24.56157578473089 25.328997790652945 25.640953836584963 24.468472588031204 66-67 24.636011290254658 25.36919042431155 25.482596095111116 24.512202190322675 68-69 24.589633587822846 25.34851213315325 25.483732536604258 24.578121742419647 70-71 24.688679195745493 25.18364373828721 25.572289797598756 24.55538726836854 72-73 24.745849574349695 25.184072530506295 25.516213466178648 24.55386442896536 74-75 24.499417237440976 25.5207700225502 25.430666922375032 24.549145817633793 76-77 24.674544058603555 25.213672646953565 25.46827706068195 24.643506233760927 78-79 24.633810536647708 25.217171354969686 25.594002993636078 24.555015114746524 80-81 24.61421228356382 25.37206314133825 25.460215548160637 24.553509026937302 82-83 24.689751415074827 25.334116872884806 25.454393510995217 24.521738201045157 84-85 24.627359386215254 25.389744341420805 25.442948772930762 24.539947499433175 86-87 24.623146858602677 25.3807817209281 25.48446486568039 24.511606554788838 88-89 24.551296138297722 25.237137544915768 25.432381801194246 24.779184515592267 90-91 24.653565724653696 25.196538110629497 25.414677059172273 24.735219105544534 92-93 24.669343455106656 25.387982725747698 25.49004645904277 24.452627360102877 94-95 24.62909121659776 25.280946280981837 25.45476385810354 24.63519864431686 96-97 24.50785513019235 25.308866635549943 25.584071848862997 24.599206385394705 98-99 24.610409840943415 25.34366823756179 25.392197160818476 24.65372476067632 100-101 25.040230124881273 24.724247814805736 25.53202837484666 24.703493685466334 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 377.0 1 318.0 2 451.0 3 692.5 4 577.0 5 502.0 6 1073.5 7 2738.5 8 4078.0 9 3780.5 10 2591.5 11 1658.0 12 1448.5 13 1498.5 14 1611.0 15 1690.5 16 1759.5 17 1880.5 18 2131.5 19 2249.0 20 2261.5 21 2470.0 22 2731.0 23 3108.0 24 3514.0 25 4144.5 26 5114.0 27 6476.0 28 8562.0 29 11389.5 30 15398.0 31 20428.0 32 26852.0 33 34521.5 34 43089.0 35 52999.0 36 64993.5 37 77495.0 38 90725.0 39 104721.5 40 119089.0 41 134461.5 42 149898.5 43 167215.0 44 185529.5 45 202189.0 46 216023.0 47 233899.5 48 257274.5 49 263942.5 50 255018.5 51 249890.5 52 249058.5 53 248082.0 54 244040.5 55 235244.5 56 219239.5 57 199221.5 58 180704.0 59 162773.0 60 141574.0 61 118979.5 62 96766.5 63 73383.0 64 53558.0 65 40153.0 66 30447.5 67 23446.0 68 17630.5 69 12785.5 70 9515.5 71 7106.0 72 5107.5 73 3702.0 74 2664.0 75 1829.0 76 1236.0 77 752.0 78 443.5 79 229.5 80 113.5 81 58.0 82 36.0 83 20.0 84 10.5 85 5.5 86 1.5 87 1.0 88 1.0 89 1.5 90 1.5 91 1.0 92 0.0 93 0.0 94 0.5 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.3237682162222706 2 0.0 3 0.006466153279887168 4 0.06501155249208494 5 3.500196932132655E-4 6 0.0649194420465025 7 0.07549372119936643 8 0.10550330437012483 9 0.09351052435529136 10-11 0.0974067962034285 12-13 0.09697387710919105 14-15 0.06506681875943442 16-17 0.03670601256460166 18-19 0.039386426531050615 20-21 0.028425283506740458 22-23 0.04337480882477019 24-25 0.03479011529648695 26-27 0.021903863959503826 28-29 0.024501378524928587 30-31 0.0032699208181765594 32-33 0.00586743538360132 34-35 0.008335995325210666 36-37 0.010850610489611232 38-39 0.016054850665018994 40-41 0.020577473543116714 42-43 0.003794950357996458 44-45 0.014544239357467008 46-47 0.025192206866796872 48-49 0.0028462127684973433 50-51 0.007387257735711551 52-53 0.002496193075284078 54-55 0.004412090343398794 56-57 0.0038041614025547017 58-59 0.0012527020599211608 60-61 0.0055634709131792736 62-63 0.015594298437106803 64-65 0.007700433250691841 66-67 0.039985144427336465 68-69 0.0629851226892713 70-71 0.012996783871682042 72-73 0.033242659810701986 74-75 0.05184896981835452 76-77 0.3155059092535259 78-79 0.07540161075378399 80-81 0.03442167351415719 82-83 0.02965035243298689 84-85 0.020015599825063842 86-87 0.1189882736033938 88-89 0.5366630890969603 90-91 0.1322705998563814 92-93 0.0503752026890355 94-95 0.00827151801330296 96-97 0.005830591205368344 98-99 0.010592701241980404 100-101 0.007930709364647936 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 5428266.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 48.006357202695035 #Duplication Level Percentage of deduplicated Percentage of total 1 67.59233867104585 32.448619544077644 2 16.68379892963558 16.018568218280535 3 6.4342832510630705 9.266595002815551 4 3.070630284627239 5.896390971249135 5 1.6989067037728476 4.077916103768627 6 1.0240521490181176 2.9496607955970746 7 0.6916315280332531 2.3241897131187095 8 0.48024313934454976 1.8443778953214485 9 0.3406060857887575 1.4716131677808193 >10 1.8319722228463307 15.566986727341256 >50 0.10923492730977812 3.5737214437334233 >100 0.04022808085811946 3.179457023020704 >500 0.001305873451827309 0.3950399740267569 >1k 6.913378841542124E-4 0.7033589088395834 >5k 7.68153204602893E-5 0.2835045110290038 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8134 0.14984527287351063 No Hit GAGTAAGCAGTGGTATCAACGCAGAGTAAGCAGTGGTATCAACGCAGAGT 7242 0.13341276938160362 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.8422089116487658E-5 2 0.0 0.0 0.0 0.0 1.8422089116487658E-5 3 0.0 0.0 0.0 1.8422089116487658E-5 1.8422089116487658E-5 4 0.0 0.0 0.0 1.8422089116487658E-5 1.8422089116487658E-5 5 0.0 0.0 0.0 1.8422089116487658E-5 3.6844178232975316E-5 6 0.0 0.0 0.0 1.8422089116487658E-5 7.368835646595063E-5 7 0.0 0.0 0.0 3.6844178232975316E-5 7.368835646595063E-5 8 0.0 0.0 0.0 7.368835646595063E-5 7.368835646595063E-5 9 0.0 0.0 0.0 1.1053253469892596E-4 7.368835646595063E-5 10-11 0.0 0.0 0.0 1.289546238154136E-4 1.1053253469892596E-4 12-13 0.0 0.0 0.0 2.1185402483960808E-4 2.210650693978519E-4 14-15 0.0 0.0 0.0 2.3027611395609574E-4 2.579092476308272E-4 16-17 0.0 0.0 0.0 2.579092476308272E-4 3.131755149802902E-4 18-19 0.0 0.0 0.0 2.855423813055587E-4 3.500196932132655E-4 20-21 0.0 0.0 0.0 3.22386559538534E-4 3.684417823297532E-4 22-23 0.0 0.0 0.0 3.5923073777150935E-4 3.9607491600448467E-4 24-25 0.0 0.0 0.0 4.3291909423746E-4 4.3291909423746E-4 26-27 0.0 1.8422089116487658E-5 0.0 4.789743170286791E-4 4.421301387957038E-4 28-29 0.0 1.8422089116487658E-5 0.0 9.303155003826267E-4 4.5134118335394765E-4 30-31 0.0 1.8422089116487658E-5 0.0 0.002100118159279593 4.605522279121915E-4 32-33 0.0 1.8422089116487658E-5 0.0 0.005020019284242887 4.7897431702867915E-4 34-35 0.0 1.8422089116487658E-5 0.0 0.008547849350050273 4.7897431702867915E-4 36-37 0.0 5.526626734946298E-5 0.0 0.014203430708811984 4.7897431702867915E-4 38-39 0.0 9.21104455824383E-5 0.0 0.023174988108541475 5.250295398198982E-4 40-41 0.0 9.21104455824383E-5 0.0 0.032874218028372225 5.342405843781421E-4 42-43 0.0 9.21104455824383E-5 0.0 0.041808931249868744 5.342405843781421E-4 44-45 0.0 9.21104455824383E-5 0.0 0.05241084353640739 5.710847626111174E-4 46-47 0.0 9.21104455824383E-5 0.0 0.06408123699170232 6.816172973100434E-4 48-49 0.0 9.21104455824383E-5 0.0 0.07529107821908507 7.092504309847748E-4 50-51 0.0 9.21104455824383E-5 0.0 0.0865009194464678 7.184614755430187E-4 52-53 0.0 9.21104455824383E-5 0.0 0.09683571144081737 7.368835646595064E-4 54-55 0.0 9.21104455824383E-5 0.0 0.1091140338369564 7.737277428924817E-4 56-57 0.0 9.21104455824383E-5 0.0 0.12187133055012411 8.013608765672132E-4 58-59 0.0 9.21104455824383E-5 0.0 0.1346286272632918 8.289940102419447E-4 60-61 1.8422089116487658E-5 9.21104455824383E-5 0.0 0.14731223561999357 8.289940102419447E-4 62-63 1.8422089116487658E-5 9.21104455824383E-5 0.0 0.15971030159538976 9.026823667078953E-4 64-65 1.8422089116487658E-5 9.21104455824383E-5 0.0 0.17318605978410048 9.118934112661392E-4 66-67 1.8422089116487658E-5 9.21104455824383E-5 0.0 0.18797899734464008 9.303155003826267E-4 68-69 1.8422089116487658E-5 9.21104455824383E-5 0.0 0.20312195459839294 9.395265449408706E-4 70-71 1.8422089116487658E-5 9.21104455824383E-5 0.0 0.2179885805153985 9.671596786156021E-4 72-73 1.8422089116487658E-5 9.21104455824383E-5 0.0 0.23365656730897122 0.0010500590796397964 74-75 1.8422089116487658E-5 9.21104455824383E-5 0.0 0.24891005709742303 0.0011145363915475034 76-77 1.8422089116487658E-5 9.21104455824383E-5 0.0 0.265001751940675 0.0011329584806639911 78-79 1.8422089116487658E-5 9.21104455824383E-5 0.0 0.28265011331427015 0.0011421695252222348 80-81 1.8422089116487658E-5 9.21104455824383E-5 0.0 0.30032610782154007 0.001188224748013454 82-83 1.8422089116487658E-5 9.21104455824383E-5 0.0 0.3180665796407177 0.0013171793718288675 84-85 1.8422089116487658E-5 9.21104455824383E-5 0.0 0.33671894487116144 0.0013632345946200867 86-87 1.8422089116487658E-5 9.21104455824383E-5 0.0 0.35723194110237044 0.001400078772853062 88-89 1.8422089116487658E-5 9.21104455824383E-5 0.0 0.3796424125125777 0.0014553450402025252 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTACATG 18450 0.0 25.928144 1 TACATGG 18890 0.0 24.465975 2 GTATCAA 20250 0.0 24.070477 1 ACATGGG 19585 0.0 22.65275 3 TCAACGC 23390 0.0 20.389622 4 TATCAAC 23670 0.0 20.247646 2 CAACGCA 23680 0.0 20.027239 5 ATCAACG 24060 0.0 19.841208 3 CATGGGG 15345 0.0 19.780607 4 AACGCAG 24685 0.0 19.231987 6 GAGTACA 14425 0.0 19.091764 1 AGAGTAC 17920 0.0 19.08839 10-11 TAGATCG 455 0.0 18.780123 5 GTACCTG 5115 0.0 18.537086 1 AGTACAT 14045 0.0 18.498955 2 GTATATA 1390 0.0 17.481932 1 ACGCAGA 27505 0.0 17.192421 7 GGTATCA 15345 0.0 16.767216 1 GAGTACT 8660 0.0 16.580313 12-13 CGCAGAG 28430 0.0 16.532848 8 >>END_MODULE