##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921432_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2457125 Sequences flagged as poor quality 0 Sequence length 98 %GC 49 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.579463397263062 31.0 31.0 34.0 27.0 34.0 2 30.679940987943226 31.0 31.0 34.0 27.0 34.0 3 30.814324057587626 31.0 31.0 34.0 27.0 34.0 4 34.33201241288091 37.0 35.0 37.0 31.0 37.0 5 34.334241033728446 37.0 35.0 37.0 31.0 37.0 6 34.42938719031388 37.0 35.0 37.0 31.0 37.0 7 34.326877956961894 37.0 35.0 37.0 31.0 37.0 8 34.3162045073002 37.0 35.0 37.0 31.0 37.0 9 35.79941272829018 39.0 37.0 39.0 30.0 39.0 10-11 35.677990944701634 39.0 37.0 39.0 30.0 39.0 12-13 35.534562140713234 39.0 37.0 39.0 30.0 39.0 14-15 36.57849783792034 40.0 37.0 41.0 30.0 41.0 16-17 36.446856590527545 40.0 37.0 41.0 30.0 41.0 18-19 36.28235478455512 40.0 36.0 41.0 29.0 41.0 20-21 36.175167523019795 39.5 36.0 41.0 29.0 41.0 22-23 36.22240708144681 40.0 36.5 41.0 29.0 41.0 24-25 36.09501775448949 40.0 36.0 41.0 28.5 41.0 26-27 35.84028101948415 39.0 36.0 41.0 27.0 41.0 28-29 35.626668769395124 39.0 36.0 40.5 27.0 41.0 30-31 35.38933794576995 39.0 35.0 40.0 26.5 41.0 32-33 35.130466500483294 39.0 35.0 40.0 25.0 41.0 34-35 34.71237727018365 38.0 34.5 40.0 24.5 41.0 36-37 34.334195452001836 38.0 34.0 40.0 22.5 41.0 38-39 34.11673765070967 38.0 33.5 40.0 21.0 41.0 40-41 33.872176425700765 38.0 33.0 40.0 19.0 41.0 42-43 33.59676023808312 38.0 33.0 40.0 18.0 41.0 44-45 33.28962954672636 38.0 33.0 40.0 15.5 41.0 46-47 33.002810398331384 38.0 32.0 40.0 14.5 41.0 48-49 32.801345678384294 38.0 32.0 40.0 10.5 41.0 50-51 32.03886574757084 36.0 31.0 39.0 10.5 40.0 52-53 32.536769191636566 37.0 32.0 39.0 12.0 40.0 54-55 32.98378816706517 38.0 33.0 40.0 9.0 41.0 56-57 32.83777443150023 37.0 32.5 40.0 8.0 41.0 58-59 32.51861057129776 37.0 32.0 40.0 7.0 41.0 60-61 32.06853192247036 36.0 31.5 39.0 2.0 41.0 62-63 31.600810907056008 36.0 31.0 39.0 2.0 40.0 64-65 31.077999898255072 35.0 30.5 39.0 2.0 40.0 66-67 30.589109426667346 35.0 30.0 38.0 2.0 40.0 68-69 30.079908226077222 34.5 29.0 37.5 2.0 39.5 70-71 29.5585436231368 34.0 29.0 37.0 2.0 39.0 72-73 29.010128910820576 34.0 28.0 36.0 2.0 39.0 74-75 28.42703220226891 34.0 27.5 35.5 2.0 38.5 76-77 27.848024622271964 33.5 26.0 35.0 2.0 37.0 78-79 27.284522765427074 33.0 26.0 35.0 2.0 37.0 80-81 26.707336012616373 32.5 25.0 35.0 2.0 36.0 82-83 26.07709151956046 32.0 23.5 35.0 2.0 36.0 84-85 25.45967868952536 32.0 21.0 34.0 2.0 35.0 86-87 24.84661321666582 31.0 19.0 34.0 2.0 35.0 88-89 24.191122755252582 31.0 14.0 34.0 2.0 35.0 90-91 23.44679656102152 30.5 4.5 34.0 2.0 35.0 92-93 22.640667243221245 30.0 2.0 34.0 2.0 35.0 94-95 21.736110901968765 29.0 2.0 34.0 2.0 35.0 96-97 20.839692933814923 29.0 2.0 34.0 2.0 34.5 98 20.21497522511065 29.0 2.0 33.0 2.0 34.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 67723.0 3 11972.0 4 9238.0 5 7779.0 6 7115.0 7 7561.0 8 8773.0 9 9875.0 10 11381.0 11 12419.0 12 14069.0 13 16345.0 14 13931.0 15 13418.0 16 15156.0 17 17356.0 18 19654.0 19 18776.0 20 19461.0 21 21229.0 22 23568.0 23 26027.0 24 29219.0 25 33064.0 26 37799.0 27 43281.0 28 50442.0 29 59103.0 30 70816.0 31 85856.0 32 107585.0 33 140101.0 34 191941.0 35 271974.0 36 372527.0 37 402202.0 38 180387.0 39 8002.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.98591161023199 17.173152015954706 13.102222934810573 24.738713439002733 2 15.89643838472351 19.17741785742789 38.73352302988942 26.192620727959177 3 20.30871213432366 22.69531821074995 27.925237648643662 29.07073200628273 4 13.691887632625388 15.000030541252068 35.35703741710595 35.95104440901659 5 15.296365711157971 35.707728860663195 33.069063624286585 15.926841803892247 6 34.33162110242801 33.60247382274114 17.03473590199192 15.031169172838938 7 30.698364523178313 30.353329280641827 19.839689313557393 19.108616882622464 8 27.655855395241822 33.18563429038514 19.31463844739743 19.843871866975608 9 26.752836017730452 16.70423601528824 19.307022578242343 37.23590538873896 10-11 26.435738253633474 24.862737978671852 26.436002835503547 22.265520932191126 12-13 26.927702972497407 22.049980808548277 26.73495404430844 24.287362174645875 14-15 23.825567349796426 23.625095783686092 24.639542965534154 27.909793900983328 16-17 24.116550672559587 26.642200580119784 25.079617899210906 24.161630848109727 18-19 24.102001109238852 26.224214472390784 26.338721801755728 23.33506261661464 20-21 24.668883343801653 25.29985425816264 26.164570151191878 23.866692246843822 22-23 24.373039411395652 24.998961142661592 26.165597933692386 24.462401512250366 24-25 24.3723819977152 25.19307798668624 26.224822887118155 24.209717128480403 26-27 24.294548899897922 25.228374951221085 26.386197052979405 24.09087909590159 28-29 24.13247746439458 25.745480556586376 26.07659478437553 24.04544719464351 30-31 24.42146993427322 25.33820379374659 25.98081136332169 24.259514908658506 32-33 24.270706678383807 25.416079639105533 25.982211360049472 24.331002322461188 34-35 24.59815070242656 25.317925925925927 26.09050319284802 23.99342017879949 36-37 24.52085297582312 25.253719689286964 26.082222241795012 24.143205093094906 38-39 24.383089279503306 25.458592531131885 26.033295644862832 24.125022544501977 40-41 24.540538261115923 25.441201998581796 25.910632900612974 24.107626839689306 42-43 24.38941283272662 25.368161386889938 25.777231868409828 24.465193911973614 44-45 24.480117596723368 25.27772997728152 25.81904075760183 24.423111668393283 46-47 24.720756257218294 25.39519677234231 25.760681539888967 24.123365430550425 48-49 24.5896689366006 25.444781034022824 25.65561321765999 24.30993681171659 50-51 24.253713402294302 25.568496279999238 25.896803252542867 24.280987065163593 52-53 24.4971038703661 25.70863334544235 25.548847589002282 24.245415195189267 54-55 24.331943044989416 25.314104582383283 25.80677189294712 24.547180479680186 56-57 24.496475311836328 25.40365971714508 25.71546023520293 24.384404735815664 58-59 24.806979880819625 25.362212551355594 25.60234081069575 24.228466757129024 60-61 24.540798006365147 25.42021522008448 25.896056412664407 24.142930360885963 62-63 24.260418960187078 25.50256233123441 25.86323674696478 24.373781961613734 64-65 24.34264627929014 25.52544703982579 25.754303596171123 24.37760308471295 66-67 24.436006336496803 25.462145409417698 25.607251022474582 24.494597231610914 68-69 24.354385041597727 25.496035846603448 25.637164045519523 24.512415066279303 70-71 24.53460163667085 25.230454659423664 25.71615086625265 24.518792837652835 72-73 24.59337856892812 25.205621296935476 25.770773149162956 24.43022698497345 74-75 24.262031659194474 25.742057091222065 25.58498774397063 24.410923505612832 76-77 24.552590626378233 25.272477711573664 25.53650582822694 24.638425833821156 78-79 24.492797655143704 25.323356190066505 25.72153277642451 24.462313378365284 80-81 24.56297882806381 25.41135282900713 25.581677771215023 24.44399057171404 82-83 24.63414793747858 25.313625458772066 25.616024447121895 24.436202156627463 84-85 24.50212400788155 25.418755906409963 25.575871777422865 24.503248308285624 86-87 24.508061682176884 25.42201405190525 25.61613796044378 24.453786305474086 88-89 24.447061354289694 25.300669718077152 25.47292500269916 24.779343924933993 90-91 24.504324554741064 25.22021444394128 25.51876767823391 24.75669332308375 92-93 24.72637239032101 25.422314045869754 25.53452906694099 24.316784496868245 94-95 24.737194096791086 25.244946449239997 25.54212694544862 24.4757325085203 96-97 24.453535936723107 25.252306970141053 25.791554084997255 24.50260300813859 98 24.642185862595284 25.396922747309315 25.2708266124993 24.690064777596103 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 407.0 1 311.5 2 427.0 3 599.5 4 443.5 5 385.5 6 627.0 7 1247.5 8 1792.5 9 1726.0 10 1349.0 11 1080.5 12 1101.0 13 1316.5 14 1505.5 15 1696.0 16 1842.5 17 1921.0 18 1955.5 19 1884.5 20 1810.5 21 1733.0 22 1658.5 23 1771.0 24 2011.0 25 2277.5 26 2899.0 27 3876.5 28 5110.0 29 7070.5 30 9673.5 31 12862.0 32 16873.5 33 21210.5 34 26262.0 35 32056.0 36 38135.5 37 44701.5 38 51281.5 39 57195.0 40 63237.0 41 70101.5 42 77157.0 43 84255.0 44 90722.5 45 97371.5 46 107861.0 47 118006.0 48 120354.5 49 115976.0 50 112676.0 51 111397.5 52 109163.0 53 107895.5 54 105170.0 55 100171.0 56 93606.0 57 86169.5 58 79001.5 59 70740.0 60 61712.0 61 51840.0 62 41615.0 63 31867.0 64 23557.5 65 17697.5 66 13446.0 67 10427.0 68 8082.0 69 6192.0 70 4663.0 71 3539.0 72 2772.5 73 2117.0 74 1663.0 75 1280.5 76 894.0 77 554.5 78 330.0 79 223.0 80 145.5 81 81.5 82 51.0 83 33.5 84 26.5 85 16.0 86 9.0 87 6.5 88 6.0 89 6.0 90 4.5 91 4.5 92 5.0 93 3.5 94 3.5 95 3.0 96 3.0 97 3.0 98 1.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.49667802818334433 2 0.051808516050261995 3 0.0612097471638602 4 0.058198097369893675 5 0.06833189194688914 6 0.06731444269217073 7 0.04655847789591494 8 0.02250597751437147 9 0.013633820013226841 10-11 0.017032100523986366 12-13 0.012290786996998525 14-15 0.01699140255379763 16-17 0.015912906343796104 18-19 0.056448084651777995 20-21 0.08542503942615863 22-23 0.10194841532278577 24-25 0.07203540723406421 26-27 0.08835529327974767 28-29 0.09083786946126061 30-31 0.061250445134048946 32-33 0.036404334333825096 34-35 0.41715419443455254 36-37 0.655013481202625 38-39 0.5996235437757542 40-41 0.5939054789642366 42-43 0.5658238795340083 44-45 0.5502162079666276 46-47 0.5391463600752913 48-49 0.5291143104237677 50-51 0.5443557002594496 52-53 0.6274813043699445 54-55 0.5985043495955639 56-57 0.5524952942971969 58-59 0.5296637330213155 60-61 0.5432161570941649 62-63 0.5554051991656916 64-65 0.5742483593630767 66-67 0.6009462278068881 68-69 0.5535737905071985 70-71 0.49993386579844334 72-73 0.4823930406470977 74-75 0.4635498804497126 76-77 0.4778552169710536 78-79 0.4721778501297248 80-81 0.46825049600651164 82-83 0.48882331993691813 84-85 0.4541689983212087 86-87 0.45844228519102614 88-89 0.4849977107391769 90-91 0.46792491224500177 92-93 0.4628987129266928 94-95 0.4737854199521799 96-97 0.46774177137915246 98 0.46281731698631534 >>END_MODULE >>Sequence Length Distribution pass #Length Count 98 2457125.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 62.891429431786186 #Duplication Level Percentage of deduplicated Percentage of total 1 79.34548627766026 49.90151050962229 2 12.387116152147879 15.580868826922945 3 3.5793479326045445 6.753309237456255 4 1.525300976028722 3.837134347845798 5 0.8477856642287028 2.665922613755972 6 0.507739522550922 1.9159478611344076 7 0.34816451026476497 1.5327594609578206 8 0.24886226751410664 1.2521042988478186 9 0.18227919190704625 1.0317419041234508 >10 0.9628501938980297 10.721826734115774 >50 0.049764204829049974 2.1035384861012187 >100 0.01380954660993262 1.3806899583962366 >500 7.143111876746469E-4 0.29674378118434985 >1k 7.143111876693145E-4 0.794910673952293 >5k 6.49373806972104E-5 0.23099130558334202 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAGTAAGCAGTGGTATCAACGCAGAGTAAGCAGTGGTATCAACGCAGAGT 5656 0.23018771938749555 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3068 0.12486137253904463 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 8.139594037747367E-5 0.0 3 0.0 0.0 0.0 8.139594037747367E-5 0.0 4 0.0 0.0 0.0 8.139594037747367E-5 0.0 5 0.0 0.0 0.0 8.139594037747367E-5 0.0 6 0.0 0.0 0.0 8.139594037747367E-5 4.069797018873684E-5 7 0.0 0.0 0.0 8.139594037747367E-5 4.069797018873684E-5 8 0.0 0.0 0.0 8.139594037747367E-5 4.069797018873684E-5 9 0.0 0.0 0.0 1.220939105662105E-4 4.069797018873684E-5 10-11 0.0 0.0 0.0 1.8314086584931573E-4 4.069797018873684E-5 12-13 0.0 0.0 0.0 2.44187821132421E-4 1.2209391056621052E-4 14-15 0.0 2.034898509436842E-5 0.0 2.44187821132421E-4 1.6279188075494735E-4 16-17 0.0 4.069797018873684E-5 0.0 2.44187821132421E-4 1.8314086584931576E-4 18-19 0.0 4.069797018873684E-5 0.0 3.255837615098947E-4 2.0348985094368417E-4 20-21 0.0 8.139594037747367E-5 0.0 4.0697970188736834E-4 2.44187821132421E-4 22-23 0.0 8.139594037747367E-5 0.0 4.273286869817368E-4 2.44187821132421E-4 24-25 0.0 8.139594037747367E-5 0.0 5.494225975479473E-4 2.44187821132421E-4 26-27 0.0 8.139594037747367E-5 0.0 7.529124484916315E-4 2.44187821132421E-4 28-29 0.0 8.139594037747367E-5 0.0 0.0015261738820776314 2.44187821132421E-4 30-31 0.0 8.139594037747367E-5 0.0 0.004090146003968052 2.44187821132421E-4 32-33 0.0 8.139594037747367E-5 0.0 0.010255888487561683 2.44187821132421E-4 34-35 0.0 1.2209391056621052E-4 0.0 0.017907106883044206 3.255837615098947E-4 36-37 0.0 1.6279188075494735E-4 0.0 0.029913008088721573 3.255837615098947E-4 38-39 0.0 1.6279188075494735E-4 0.0 0.048654423360634885 3.662817316986315E-4 40-41 0.0 1.6279188075494735E-4 0.0 0.06877956961896525 3.662817316986315E-4 42-43 0.0 1.8314086584931576E-4 0.0 0.08802970951823777 4.0697970188736834E-4 44-45 0.0 2.0348985094368417E-4 4.069797018873684E-5 0.10931474792694715 4.0697970188736834E-4 46-47 0.0 2.2383883603805258E-4 4.069797018873684E-5 0.13027420257414662 4.4767767207610517E-4 48-49 0.0 2.44187821132421E-4 4.069797018873684E-5 0.1533499516711604 4.88375642264842E-4 50-51 0.0 2.44187821132421E-4 4.069797018873684E-5 0.176303606857608 4.88375642264842E-4 52-53 0.0 2.44187821132421E-4 4.069797018873684E-5 0.20106832171745434 4.88375642264842E-4 54-55 0.0 2.6453680622678943E-4 4.069797018873684E-5 0.22477488935239354 5.697715826423157E-4 56-57 0.0 2.8488579132115787E-4 4.069797018873684E-5 0.2521239253192247 5.901205677366841E-4 58-59 0.0 3.459327466042631E-4 4.069797018873684E-5 0.2786183039120924 6.104695528310525E-4 60-61 0.0 3.662817316986315E-4 4.069797018873684E-5 0.30545861525156437 6.104695528310525E-4 62-63 0.0 3.662817316986315E-4 4.069797018873684E-5 0.33254311441216866 6.511675230197894E-4 64-65 0.0 3.662817316986315E-4 4.069797018873684E-5 0.36062471384239714 6.511675230197894E-4 66-67 0.0 4.0697970188736834E-4 4.069797018873684E-5 0.38648827389733936 6.511675230197894E-4 68-69 0.0 4.0697970188736834E-4 4.069797018873684E-5 0.41452917535737904 6.511675230197894E-4 70-71 0.0 4.0697970188736834E-4 4.069797018873684E-5 0.44405555272930763 6.511675230197894E-4 72-73 0.0 4.0697970188736834E-4 4.069797018873684E-5 0.47158772956198813 6.918654932085263E-4 74-75 0.0 4.0697970188736834E-4 4.069797018873684E-5 0.5010937579488223 6.918654932085263E-4 76-77 0.0 4.476776720761052E-4 4.069797018873684E-5 0.5310474640077326 6.918654932085263E-4 78-79 0.0 4.476776720761052E-4 4.069797018873684E-5 0.5642570076817419 6.918654932085263E-4 80-81 0.0 4.476776720761052E-4 4.069797018873684E-5 0.5986467924912244 6.918654932085263E-4 82-83 0.0 4.476776720761052E-4 4.069797018873684E-5 0.6306964440148548 7.529124484916315E-4 84-85 0.0 4.476776720761052E-4 4.069797018873684E-5 0.6652490207050923 7.732614335859999E-4 86 0.0 4.476776720761052E-4 4.069797018873684E-5 0.6896678028183344 7.732614335859999E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTACCTG 2820 0.0 34.609596 1 TACCTGG 2995 0.0 30.915493 2 GTACATG 6805 0.0 24.625385 1 TACATGG 7065 0.0 23.162086 2 ACCTGGG 3900 0.0 23.153854 3 ACATGGG 7310 0.0 21.382507 3 AGTACAT 5030 0.0 18.772446 2 GTATAGG 470 0.0 18.610819 1 GAGTACA 5345 0.0 18.604406 1 CATGGGG 5790 0.0 18.128826 4 TAACGCA 255 3.893656E-7 17.975155 4 AGAGTAC 7100 0.0 17.871828 10-11 GTACGTG 440 0.0 17.787134 1 GTATTAG 490 0.0 16.911657 1 TCGCGTA 165 0.0018663392 16.658031 9 CCTGGGG 4085 0.0 16.382252 4 GTATCAA 11035 0.0 16.353981 1 CCCTTAT 510 0.0 16.248455 1 CTATACA 855 0.0 16.083033 4 GTGTAGC 1325 0.0 15.635306 1 >>END_MODULE