##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921432_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2457125 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.90748700208577 33.0 31.0 34.0 30.0 34.0 2 32.0232885994811 34.0 31.0 34.0 30.0 34.0 3 32.15052510556036 34.0 31.0 34.0 30.0 34.0 4 35.68534974818131 37.0 35.0 37.0 35.0 37.0 5 35.48390985399603 37.0 35.0 37.0 33.0 37.0 6 35.52259856539655 37.0 35.0 37.0 33.0 37.0 7 35.45807396856082 37.0 35.0 37.0 33.0 37.0 8 35.41172508521137 37.0 35.0 37.0 33.0 37.0 9 37.03532665208323 39.0 37.0 39.0 34.0 39.0 10-11 36.9407329704431 39.0 37.0 39.0 33.0 39.0 12-13 36.82276542707433 39.0 37.0 39.0 33.0 39.0 14-15 38.10906201353208 40.0 38.0 41.0 33.0 41.0 16-17 38.01507981889404 40.0 38.0 41.0 33.0 41.0 18-19 37.91984453375388 40.0 38.0 41.0 33.0 41.0 20-21 37.807918400569775 40.0 38.0 41.0 33.0 41.0 22-23 37.770981329806176 40.0 38.0 41.0 32.5 41.0 24-25 37.821450679147375 40.0 38.0 41.0 33.0 41.0 26-27 37.70994068270845 40.0 38.0 41.0 32.5 41.0 28-29 37.58078201149718 40.0 38.0 41.0 32.0 41.0 30-31 37.4483023859185 40.0 37.5 41.0 32.0 41.0 32-33 37.286552983669935 40.0 37.0 41.0 31.5 41.0 34-35 37.134150684234626 40.0 37.0 41.0 31.0 41.0 36-37 37.03283227349036 40.0 37.0 41.0 31.0 41.0 38-39 36.99704451340489 40.0 37.0 41.0 31.0 41.0 40-41 36.84326682606705 40.0 37.0 41.0 30.5 41.0 42-43 36.61615628020552 40.0 36.0 41.0 30.0 41.0 44-45 36.41001414254464 39.0 36.0 41.0 30.0 41.0 46-47 36.14099445490156 39.0 35.0 40.5 29.5 41.0 48-49 35.80922195655492 39.0 35.0 40.0 28.5 41.0 50-51 35.53735605636669 39.0 35.0 40.0 28.0 41.0 52-53 35.24011761713385 38.0 34.5 40.0 27.0 41.0 54-55 34.925079513659256 38.0 34.0 40.0 26.5 41.0 56-57 34.540150989469396 38.0 34.0 40.0 26.0 41.0 58-59 34.15399236913059 37.0 33.5 40.0 25.5 41.0 60-61 33.722171033219716 37.0 33.0 39.5 24.0 41.0 62-63 33.2956017703617 36.0 32.5 39.0 23.0 40.0 64-65 32.786353360126164 35.5 32.0 39.0 22.0 40.0 66-67 32.25723436943582 35.0 31.0 38.0 20.5 40.0 68-69 31.748398229638298 35.0 31.0 37.5 18.5 39.5 70-71 31.189454138474844 34.5 30.5 37.0 17.5 39.0 72-73 30.6348567940174 34.0 30.0 36.0 13.5 39.0 74-75 30.115417205066898 34.0 29.0 36.0 10.5 38.5 76-77 28.81830960980821 32.5 28.0 34.5 9.0 36.0 78-79 29.753696291397468 34.0 29.5 35.0 8.0 37.0 80-81 29.776251106476064 34.0 30.0 35.0 7.0 36.5 82-83 29.430685862542607 34.0 29.5 35.0 4.5 36.0 84-85 28.936473317393293 34.0 29.0 35.0 2.0 36.0 86-87 28.429384137966117 33.0 29.0 35.0 2.0 35.0 88-89 27.878034898509437 33.0 27.0 35.0 2.0 35.0 90-91 27.392744569364602 33.0 26.0 35.0 2.0 35.0 92-93 26.952494887317496 32.5 25.5 34.0 2.0 35.0 94-95 26.456177646639873 32.0 25.0 34.0 2.0 35.0 96-97 25.68119265401638 32.0 23.5 34.0 2.0 35.0 98-99 24.66318298824846 32.0 12.5 34.0 2.0 35.0 100-101 21.040771226535078 27.0 2.0 32.5 2.0 34.5 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 17046.0 3 8801.0 4 5338.0 5 3863.0 6 3371.0 7 3497.0 8 3994.0 9 4814.0 10 5455.0 11 6731.0 12 7786.0 13 9221.0 14 10480.0 15 11484.0 16 13175.0 17 15160.0 18 15657.0 19 13920.0 20 14014.0 21 14828.0 22 15825.0 23 17468.0 24 19967.0 25 23487.0 26 27665.0 27 33395.0 28 41001.0 29 49658.0 30 61078.0 31 76033.0 32 98048.0 33 132336.0 34 186360.0 35 283151.0 36 434685.0 37 533536.0 38 228226.0 39 6571.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.34213567147737 17.578993614854628 13.41272505003834 24.66614566362966 2 16.110332197181666 19.405199165691613 38.31962150887725 26.16484712824948 3 20.395616722032877 22.78306567346663 28.069527801270993 28.7517898032295 4 13.923872276135056 15.293878099535348 35.277751760255086 35.50449786407451 5 15.361226479021129 35.70732342605047 33.047008381781076 15.884441713147329 6 34.52510062281685 33.686560180039805 16.78481846760094 15.003520729542402 7 30.801604243008523 30.25831701109342 19.81839649826351 19.121682247634546 8 27.729011855517427 33.2582322286409 19.166711822394173 19.846044093447503 9 26.636575101946036 16.71487291881388 19.267618027237212 37.38093395200287 10-11 26.396981435231893 24.871790641251504 26.47629942275489 22.254928500761707 12-13 26.918786837855585 22.02386384190826 26.806653912777083 24.25069540745907 14-15 23.74931708551749 23.612133488985908 24.68223477515594 27.95631465034066 16-17 24.073397401382344 26.645653095718757 25.174513133244346 24.106436369654553 18-19 24.092861534202182 26.213759043698825 26.419977769906318 23.27340165219268 20-21 24.6624024334789 25.213147201943002 26.302484814165112 23.821965550412983 22-23 24.310274066304892 24.992976521631498 26.2507898868426 24.445959525221006 24-25 24.363576701279776 25.149023113111813 26.313869556658908 24.173530628949496 26-27 24.273496445283005 25.197824631247723 26.50174326659462 24.026935656874656 28-29 24.102960847961715 25.68843154926917 26.225918227610862 23.98268937515825 30-31 24.380164364271273 25.31169078271947 26.100159032658166 24.207985820351094 32-33 24.15380053850213 25.380072165227478 26.180438302719107 24.285688993551283 34-35 24.46581883629135 25.306540091772767 26.206054039621673 24.02158703231421 36-37 24.37415555339833 25.285582962484032 26.254441389732953 24.085820094384683 38-39 24.31733308747942 25.446388684858633 26.20918708037693 24.027091147285013 40-41 24.466874321228474 25.404759501173146 26.040036733039056 24.088329444559324 42-43 24.3214176116407 25.416538802474854 25.899295654842387 24.362747931042062 44-45 24.385058147320656 25.223473681168457 25.984206136739314 24.407262034771573 46-47 24.555575050407306 25.43894965538213 25.91155506904366 24.093920225166894 48-49 24.467603643554813 25.470045188317215 25.84952449094463 24.212826677183337 50-51 24.181508447385948 25.587625437866198 25.9938822362012 24.23698387854666 52-53 24.42898926098316 25.70064692946086 25.629586639525925 24.240777170030057 54-55 24.311126613184513 25.311464827907315 25.83620639482234 24.541202164085828 56-57 24.44156246922102 25.424312402677373 25.810570793892147 24.323554334209458 58-59 24.744291843467376 25.334357848160714 25.682675253490096 24.238675054881817 60-61 24.547284029782134 25.389436976706943 25.939564338527454 24.123714654983473 62-63 24.265937471634537 25.485403006301354 25.896938789216584 24.35172073284752 64-65 24.28394467043597 25.565167063805315 25.77312811145361 24.377760154305104 66-67 24.41703026676946 25.453282925700176 25.640062057493772 24.489624750036594 68-69 24.303040163090078 25.541100243099834 25.704218827724905 24.45164076608518 70-71 24.520296783770632 25.27595285829505 25.756495579320383 24.447254778613935 72-73 24.586284999392383 25.26266528600517 25.786560778859187 24.36448893574326 74-75 24.23311553183965 25.75317219701123 25.601085091615683 24.412627179533434 76-77 24.40353312761322 25.333417434034533 25.629096719684807 24.633952718667437 78-79 24.350571461271745 25.32487209783981 25.867170740270534 24.457385700617916 80-81 24.438750200251885 25.476436638064488 25.61905058520369 24.465762576479936 82-83 24.51342051349379 25.335922480288797 25.71061601139062 24.440040994826795 84-85 24.37661042476543 25.468198563083877 25.70022184682393 24.454969165326766 86-87 24.412954145860454 25.468697475139507 25.68135376365774 24.436994615342304 88-89 24.26817996015452 25.406239348658584 25.550350847258585 24.77522984392831 90-91 24.409340359855584 25.29548009440692 25.589202743204492 24.705976802533 92-93 24.59838938390015 25.52092569198367 25.660325116021976 24.220359808094205 94-95 24.532759825587004 25.372853975718446 25.656521337426796 24.437864861267755 96-97 24.271572996140193 25.330063478089755 25.912890551628326 24.48547297414173 98-99 24.395951123356095 25.408577304783837 25.578711853534504 24.616759718325568 100-101 24.74916456021811 24.80012226593288 25.798213590525936 24.652499583323074 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 180.0 1 176.5 2 351.0 3 506.5 4 358.5 5 296.5 6 535.5 7 1073.5 8 1544.0 9 1476.5 10 1033.5 11 707.0 12 643.5 13 688.5 14 743.5 15 774.5 16 832.0 17 893.0 18 972.0 19 1011.0 20 1033.0 21 1153.0 22 1319.5 23 1486.0 24 1652.0 25 1978.0 26 2473.0 27 3128.5 28 4119.0 29 5487.0 30 7510.0 31 10074.5 32 13516.5 33 17805.5 34 22340.0 35 27494.5 36 33369.0 37 39442.5 38 45525.5 39 51659.5 40 58228.5 41 64646.0 42 70648.5 43 77588.5 44 85053.0 45 92024.5 46 97531.5 47 106076.0 48 119327.0 49 122180.5 50 114139.0 51 109595.0 52 108515.5 53 107059.0 54 105147.0 55 100679.0 56 93246.5 57 85219.5 58 78100.5 59 70418.5 60 60993.0 61 51521.5 62 42144.0 63 32134.5 64 23564.5 65 17577.0 66 13242.0 67 10458.0 68 8191.5 69 6196.0 70 4715.0 71 3635.5 72 2780.0 73 2167.0 74 1634.5 75 1223.0 76 901.0 77 571.5 78 338.0 79 181.5 80 107.0 81 68.0 82 38.0 83 21.0 84 9.0 85 5.0 86 4.5 87 2.0 88 0.5 89 1.0 90 1.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.3257058554204609 2 0.0 3 0.0061453934984992626 4 0.06165742483593631 5 4.0697970188736834E-4 6 0.06788421427481305 7 0.07675637177595768 8 0.10809380882128505 9 0.09747163860202472 10-11 0.09964898000712215 12-13 0.09966932899221652 14-15 0.06741618761764258 16-17 0.038032253141374574 18-19 0.040494480337793154 20-21 0.02946533041664547 22-23 0.04383171389326957 24-25 0.03575316681080531 26-27 0.021569924200030524 28-29 0.024378084143053366 30-31 0.003357582540570789 32-33 0.005066897288497736 34-35 0.007610520425293789 36-37 0.010764613114920893 38-39 0.015526275627003103 40-41 0.019575723660782418 42-43 0.0037035152871750525 44-45 0.014162893625680418 46-47 0.02588390904003663 48-49 0.003011649793966526 50-51 0.007386681589255736 52-53 0.0022994353156636314 54-55 0.0043139848400061045 56-57 0.0037035152871750525 58-59 0.0010988451950958945 60-61 0.00604364857302742 62-63 0.014325685506435365 64-65 0.007101795797934578 66-67 0.041328788726662256 68-69 0.06306150480744772 70-71 0.013003001475301418 72-73 0.033148496718726154 74-75 0.05272422037950858 76-77 0.3125807600345933 78-79 0.07846568652388462 80-81 0.03432873785419952 82-83 0.02920079361041868 84-85 0.01933153583965 86-87 0.11924505265299894 88-89 0.5365620389683065 90-91 0.13346899323396247 92-93 0.05016024825761815 94-95 0.008058198097369894 96-97 0.005514574960573841 98-99 0.01001170066642926 100-101 0.007549473470010683 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2457125.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.860420027983366 #Duplication Level Percentage of deduplicated Percentage of total 1 76.89534713924886 46.029877779530246 2 13.735208143990384 16.443906573420843 3 4.0783533581636195 7.323958351266321 4 1.690440324689308 4.047618714725702 5 0.9463083532393242 2.832320775044759 6 0.5817156547707207 2.0893046058857223 7 0.3968835545306951 1.663033139348451 8 0.2859895781786132 1.3695565018718059 9 0.2021106814730325 1.088858725660591 >10 1.1134535116275972 11.893581216147533 >50 0.05542001960715113 2.2448301268690707 >100 0.01713595868055984 1.6038974218336972 >500 8.168609000700316E-4 0.32036101567660885 >1k 7.487891583909318E-4 0.8144716333374751 >5k 6.80717416719029E-5 0.23442341938115344 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAGTAAGCAGTGGTATCAACGCAGAGTAAGCAGTGGTATCAACGCAGAGT 5753 0.23413542249580305 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3156 0.12844279391565344 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 4.069797018873684E-5 7 0.0 0.0 0.0 0.0 4.069797018873684E-5 8 0.0 0.0 0.0 0.0 4.069797018873684E-5 9 0.0 0.0 0.0 0.0 4.069797018873684E-5 10-11 0.0 0.0 0.0 2.034898509436842E-5 4.069797018873684E-5 12-13 0.0 0.0 0.0 8.139594037747367E-5 1.6279188075494735E-4 14-15 0.0 0.0 0.0 8.139594037747367E-5 1.8314086584931576E-4 16-17 0.0 0.0 0.0 1.220939105662105E-4 2.0348985094368417E-4 18-19 0.0 0.0 0.0 1.424428956605789E-4 2.0348985094368417E-4 20-21 0.0 0.0 0.0 2.0348985094368417E-4 2.0348985094368417E-4 22-23 0.0 0.0 0.0 2.6453680622678943E-4 2.0348985094368417E-4 24-25 0.0 0.0 0.0 3.8663071679299996E-4 2.0348985094368417E-4 26-27 0.0 0.0 0.0 6.30818537925421E-4 2.0348985094368417E-4 28-29 0.0 0.0 0.0 0.0013837309864170523 2.0348985094368417E-4 30-31 0.0 0.0 0.0 0.004008750063590578 2.0348985094368417E-4 32-33 0.0 0.0 0.0 0.010032049651523631 2.0348985094368417E-4 34-35 0.0 0.0 0.0 0.017581523121534312 2.0348985094368417E-4 36-37 0.0 4.069797018873684E-5 0.0 0.029709518237777892 2.0348985094368417E-4 38-39 0.0 4.069797018873684E-5 0.0 0.04828814162893626 2.8488579132115787E-4 40-41 0.0 4.069797018873684E-5 0.0 0.06839293890217225 2.8488579132115787E-4 42-43 0.0 4.069797018873684E-5 0.0 0.08784656865238846 2.8488579132115787E-4 44-45 0.0 4.069797018873684E-5 0.0 0.10905021112072036 2.8488579132115787E-4 46-47 0.0 6.104695528310526E-5 0.0 0.12986722287225924 3.052347764155263E-4 48-49 0.0 8.139594037747367E-5 0.0 0.15286157602889555 4.0697970188736834E-4 50-51 0.0 8.139594037747367E-5 0.0 0.17550999643892762 4.476776720761052E-4 52-53 0.0 8.139594037747367E-5 0.0 0.1997456376863204 4.883756422648421E-4 54-55 0.0 1.0174492547184209E-4 0.0 0.22335046039578776 5.290736124535789E-4 56-57 0.0 1.220939105662105E-4 0.0 0.25053670448186394 5.494225975479473E-4 58-59 0.0 1.6279188075494735E-4 0.0 0.2768479422088823 5.697715826423157E-4 60-61 0.0 1.6279188075494735E-4 0.0 0.3030981329806176 5.697715826423157E-4 62-63 0.0 1.6279188075494735E-4 0.0 0.32989774634990077 5.697715826423157E-4 64-65 0.0 2.0348985094368417E-4 0.0 0.3572874802869207 5.697715826423157E-4 66-67 0.0 2.0348985094368417E-4 0.0 0.3826830136846925 5.697715826423157E-4 68-69 0.0 2.0348985094368417E-4 0.0 0.41015414356208985 5.697715826423157E-4 70-71 0.0 2.0348985094368417E-4 0.0 0.4389276084855268 6.104695528310526E-4 72-73 0.0 2.0348985094368417E-4 0.0 0.46607315460141424 6.918654932085262E-4 74-75 0.0 2.4418782113242105E-4 0.0 0.49507045836088925 7.32563463397263E-4 76-77 0.0 2.8488579132115787E-4 0.0 0.5243119499414967 7.732614335859999E-4 78-79 0.0 2.8488579132115787E-4 0.0 0.556972071017958 7.732614335859999E-4 80-81 0.0 2.8488579132115787E-4 0.0 0.590608943378949 7.936104186803683E-4 82-83 0.0 2.8488579132115787E-4 0.0 0.6218446354988045 8.139594037747367E-4 84-85 0.0 2.8488579132115787E-4 0.0 0.6556849977107392 8.139594037747367E-4 86-87 0.0 3.662817316986315E-4 0.0 0.6878160451747469 8.343083888691051E-4 88-89 0.0 3.662817316986315E-4 0.0 0.7222058299842296 8.546573739634736E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTACCTG 2860 0.0 29.32935 1 TACCTGG 3005 0.0 27.028229 2 GTACATG 6830 0.0 24.981478 1 TACATGG 7055 0.0 23.563345 2 ACATGGG 7470 0.0 21.300951 3 GAGTACA 5170 0.0 20.741865 1 ACCTGGG 3770 0.0 20.410257 3 CATGGGG 5610 0.0 19.389038 4 AGAGTAC 7200 0.0 18.957497 10-11 AGTACAT 4990 0.0 18.656126 2 TATAACG 190 1.8676752E-4 17.498884 2 GTATCAA 11280 0.0 16.858526 1 TACACCG 405 5.18412E-10 16.411013 5 GAGTACT 3895 0.0 16.14763 12-13 TAGACTG 875 0.0 15.734477 5 GTACTTT 4055 0.0 15.506381 14-15 GTGTAGC 1495 0.0 15.30227 1 AGTACTT 4620 0.0 15.154809 12-13 GTATAGT 570 1.8189894E-12 15.050586 1 TCAACGC 12630 0.0 14.742339 4 >>END_MODULE