##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921431_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3909720 Sequences flagged as poor quality 0 Sequence length 98 %GC 48 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.879026119517512 31.0 31.0 34.0 28.0 34.0 2 30.993167541409615 33.0 31.0 34.0 28.0 34.0 3 31.13225806451613 33.0 31.0 34.0 28.0 34.0 4 34.64485794379137 37.0 35.0 37.0 32.0 37.0 5 34.65666313700214 37.0 35.0 37.0 32.0 37.0 6 34.751466089643245 37.0 35.0 37.0 32.0 37.0 7 34.65629635881854 37.0 35.0 37.0 32.0 37.0 8 34.64531680018006 37.0 35.0 37.0 32.0 37.0 9 36.17494449730415 39.0 37.0 39.0 32.0 39.0 10-11 36.06590395220118 39.0 37.0 39.0 32.0 39.0 12-13 35.93213785130393 39.0 37.0 39.0 31.5 39.0 14-15 37.05405233622868 40.0 37.5 41.0 31.0 41.0 16-17 36.93520559017014 40.0 37.0 41.0 31.0 41.0 18-19 36.78066101920342 40.0 37.0 41.0 31.0 41.0 20-21 36.67825074429882 40.0 37.0 41.0 30.5 41.0 22-23 36.72662351779667 40.0 37.0 41.0 30.5 41.0 24-25 36.62550783687834 40.0 37.0 41.0 30.0 41.0 26-27 36.39736988838075 40.0 37.0 41.0 30.0 41.0 28-29 36.19420290967128 39.5 36.0 41.0 29.0 41.0 30-31 35.96546977788691 39.0 36.0 41.0 28.5 41.0 32-33 35.71507652721934 39.0 35.5 40.0 27.5 41.0 34-35 35.325367289729186 39.0 35.0 40.0 26.0 41.0 36-37 34.9774513264377 38.5 35.0 40.0 25.0 41.0 38-39 34.77921424040596 38.0 34.5 40.0 24.0 41.0 40-41 34.54206643954043 38.0 34.0 40.0 24.0 41.0 42-43 34.2784318314355 38.0 34.0 40.0 23.0 41.0 44-45 33.987964227617326 38.0 33.0 40.0 21.5 41.0 46-47 33.72007087464064 38.0 33.0 40.0 19.5 41.0 48-49 33.53398261256561 38.0 33.0 40.0 18.0 41.0 50-51 32.74429792926348 37.0 32.0 39.0 17.5 40.5 52-53 33.18718207441965 37.5 33.0 39.5 19.0 40.0 54-55 33.63753452932691 38.0 33.0 40.0 19.0 41.0 56-57 33.51312587602182 38.0 33.0 40.0 18.0 41.0 58-59 33.21182987528519 37.0 33.0 40.0 15.5 41.0 60-61 32.79327202459511 37.0 32.5 40.0 12.0 41.0 62-63 32.33935806144686 36.0 32.0 39.0 8.0 40.5 64-65 31.832318938440604 35.5 31.0 39.0 7.0 40.0 66-67 31.37358237930082 35.0 31.0 38.5 2.0 40.0 68-69 30.88384078655249 35.0 30.5 38.0 2.0 40.0 70-71 30.393413850608226 35.0 30.0 37.0 2.0 39.0 72-73 29.864950303346532 34.0 29.0 36.5 2.0 39.0 74-75 29.297051962800403 34.0 29.0 36.0 2.0 38.5 76-77 28.74172945888708 34.0 28.5 35.0 2.0 37.5 78-79 28.213419758959724 33.5 27.5 35.0 2.0 37.0 80-81 27.67521600012277 33.0 26.5 35.0 2.0 36.0 82-83 27.084005632116877 33.0 25.5 35.0 2.0 36.0 84-85 26.508379116663086 32.0 25.0 34.5 2.0 35.0 86-87 25.92821698229029 32.0 23.5 34.0 2.0 35.0 88-89 25.319077836776035 31.5 21.0 34.0 2.0 35.0 90-91 24.634886257839437 31.0 18.5 34.0 2.0 35.0 92-93 23.872220772843068 31.0 10.0 34.0 2.0 35.0 94-95 23.006881439080036 30.0 2.0 34.0 2.0 35.0 96-97 22.13851311602877 30.0 2.0 34.0 2.0 35.0 98 21.52599879275242 29.0 2.0 34.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 89688.0 3 16023.0 4 12400.0 5 10955.0 6 10176.0 7 10392.0 8 11515.0 9 13662.0 10 15440.0 11 16933.0 12 19525.0 13 24560.0 14 19904.0 15 19214.0 16 21405.0 17 25286.0 18 28813.0 19 26952.0 20 27024.0 21 29254.0 22 31893.0 23 35799.0 24 39891.0 25 45984.0 26 52011.0 27 60292.0 28 70633.0 29 83899.0 30 100697.0 31 124121.0 32 157693.0 33 208178.0 34 292047.0 35 431111.0 36 623603.0 37 726939.0 38 357486.0 39 18320.0 40 2.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.74755464814157 17.299150036337405 13.234219321628071 24.71907599389295 2 15.945870278658688 18.990315223555474 38.95046443114606 26.11335006663978 3 19.81572575897953 22.602899248058723 28.364924421967537 29.216450570994212 4 13.735285724705651 15.007556281823078 35.06293915689554 36.19421883657573 5 15.20924070513411 35.851194096170666 33.136808631319866 15.802756567375365 6 34.504880322423276 33.63944023339137 16.793254215475436 15.062425228709921 7 30.699102690903697 30.75212491955182 19.573621441247557 18.97515094829693 8 27.80236327801212 33.7727767646812 19.126572602184606 19.298287355122074 9 26.988010427850373 16.383267244746744 19.14289741470454 37.48582491269835 10-11 26.387892442356858 25.118817854917697 26.333914850220495 22.15937485250495 12-13 26.539349333758995 22.273191619224196 26.942065126482767 24.245393920534042 14-15 23.660331528318817 23.83110333990574 24.484835383827267 28.023729747948174 16-17 24.03618294281301 26.963214741475582 25.052573118556428 23.948029197154984 18-19 24.027887150274953 26.16798523618445 26.642841732501303 23.16128588103929 20-21 24.529311652211845 25.396255280715703 26.56386241953165 23.510570647540803 22-23 24.39574120018697 25.079334312559077 26.387884776376907 24.137039710877048 24-25 24.051541760575006 25.29736467920143 26.534036733999105 24.117056826224456 26-27 24.133438402134967 25.428186088522004 26.47988536645561 23.958490142887428 28-29 24.100948924395325 25.625567091392092 26.345478732664667 23.928005251547916 30-31 24.261157074289123 25.447564588570227 26.302504867009365 23.988773470131285 32-33 24.089687314894537 25.48482758885382 26.255608335710782 24.169876760540856 34-35 24.24081531111343 25.524580202908187 26.337106861049385 23.89749762492899 36-37 24.303804378122752 25.515034452357437 26.216363714311868 23.964797455207947 38-39 24.298680478448965 25.56011822126637 26.166871409731595 23.97432989055307 40-41 24.384517844057736 25.45678896385254 26.158404974835676 24.00028821725405 42-43 24.300975380796487 25.42779109159323 26.139199467167256 24.132034060443022 44-45 24.28511239423172 25.536467936160406 26.099776631383136 24.07864303822474 46-47 24.393527184477506 25.519708919796567 26.042877078951417 24.043886816774506 48-49 24.336799221101042 25.66251929374479 25.845067307588454 24.155614177565717 50-51 24.295159533041904 25.74378107661269 25.803310826312536 24.157748564032868 52-53 24.325546391696847 25.77305336434261 25.796208636337248 24.105191607623297 54-55 24.320256172409405 25.524493475702236 25.931781975003737 24.223468376884625 56-57 24.29957302629159 25.686562353620868 25.889438529187597 24.12442609089995 58-59 24.345646209326862 25.629961545889696 25.936272592400577 24.088119652382865 60-61 24.396892823927374 25.543642644916503 25.918202319322475 24.14126221183365 62-63 24.224332010799777 25.66064512610714 25.956568869151493 24.15845399394159 64-65 24.28194930193062 25.512049831794155 25.959453842671603 24.246547023603622 66-67 24.310296217954566 25.666406434674588 25.843661866894102 24.179635480476747 68-69 24.231688779245946 25.680460678699298 25.87495242849097 24.212898113563785 70-71 24.22474860567868 25.497338359248744 25.959031350955573 24.318881684117 72-73 24.356690471787097 25.564995150253463 25.78529329624555 24.293021081713892 74-75 24.186164308172366 25.73384146893833 25.796508214586254 24.283486008303054 76-77 24.377565471738365 25.520792369319977 25.77180699170567 24.329835167235984 78-79 24.277289441212808 25.56396726390196 25.84984141091215 24.308901883973082 80-81 24.295646553358104 25.649502473337492 25.7500036944254 24.304847278879002 82-83 24.38886487530007 25.569125268289195 25.66115236692798 24.380857489482754 84-85 24.363592492594893 25.606021321466315 25.67675111156908 24.35363507436971 86-87 24.392030473608045 25.56037218053662 25.802875164926824 24.244722180928505 88-89 24.325082615141962 25.445746476903746 25.77016642298541 24.459004484968876 90-91 24.326524790433474 25.535023486485393 25.695352239456138 24.443099483624994 92-93 24.376018147339973 25.58921161505826 25.746589985400615 24.28818025220115 94-95 24.464739412854065 25.4374603314941 25.712953647395025 24.384846608256808 96-97 24.460696977076047 25.450823595627618 25.712708822306762 24.37577060498957 98 24.43032519474859 25.52990659417331 25.639253113163495 24.400515097914603 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 846.0 1 648.5 2 882.0 3 1305.0 4 1012.5 5 843.0 6 1371.0 7 2763.5 8 4058.5 9 4059.0 10 3067.0 11 2323.0 12 2369.5 13 2622.0 14 2929.0 15 3206.0 16 3452.5 17 3600.0 18 3629.5 19 3573.0 20 3365.5 21 3167.0 22 3143.0 23 3319.0 24 3695.5 25 4385.0 26 5462.0 27 7141.0 28 9673.5 29 13136.5 30 17611.5 31 22984.0 32 29310.5 33 35972.0 34 43459.0 35 52278.5 36 61805.0 37 72240.5 38 82494.0 39 92333.5 40 102240.0 41 113249.0 42 125272.5 43 137310.0 44 148415.5 45 157291.5 46 166184.0 47 175177.5 48 179595.0 49 178667.0 50 177348.0 51 175756.5 52 174381.0 53 173835.0 54 169712.0 55 161123.5 56 148683.5 57 136570.0 58 124605.0 59 111293.5 60 97286.5 61 81098.5 62 64953.5 63 48962.5 64 35521.5 65 26794.5 66 20464.5 67 15661.5 68 11847.0 69 8902.0 70 6552.5 71 4833.5 72 3685.5 73 2651.5 74 1962.0 75 1438.0 76 1009.5 77 648.5 78 355.5 79 207.0 80 125.0 81 71.5 82 53.5 83 35.5 84 24.0 85 20.0 86 13.0 87 10.0 88 9.5 89 8.0 90 5.5 91 4.0 92 4.0 93 4.5 94 2.5 95 5.5 96 7.0 97 2.5 98 1.5 99 1.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.5061487779176003 2 0.054837686586251704 3 0.06394319797837185 4 0.06074603807945326 5 0.07243485466989964 6 0.07176984541092457 7 0.04923626244334633 8 0.02332647862251005 9 0.01465578097664283 10-11 0.017661111281626306 12-13 0.01308277830637488 14-15 0.017968038631922492 16-17 0.016382247322058868 18-19 0.05956948323665122 20-21 0.09018548642869566 22-23 0.10879295704040187 24-25 0.07634817838617598 26-27 0.09484055124152113 28-29 0.09780751562771758 30-31 0.06513254146076958 32-33 0.0377264868072394 34-35 0.42659065099291 36-37 0.665610325036064 38-39 0.6127165116683547 40-41 0.6077800967844245 42-43 0.5773175572675282 44-45 0.56208628750908 46-47 0.5520088395076885 48-49 0.5410617640137912 50-51 0.5562546678534525 52-53 0.6413630643626653 54-55 0.6112841840336393 56-57 0.5659484566669736 58-59 0.5419569687854885 60-61 0.5547200311019714 62-63 0.5686340709820652 64-65 0.5873694279897282 66-67 0.6160159806840387 68-69 0.5665751000071616 70-71 0.5119036657356537 72-73 0.4939100498245399 74-75 0.47321803095873877 76-77 0.4887818053466744 78-79 0.48205498091934973 80-81 0.4788706096600268 82-83 0.5003299469015684 84-85 0.4642020400437883 86-87 0.4660563927851611 88-89 0.49599459807863483 90-91 0.47708020011663244 92-93 0.47218215115148915 94-95 0.4829373970514512 96-97 0.4783590640761998 98 0.47115905998383517 >>END_MODULE >>Sequence Length Distribution pass #Length Count 98 3909720.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.579384416790234 #Duplication Level Percentage of deduplicated Percentage of total 1 73.3477719808716 40.032762430590665 2 14.70683912309409 16.053804521104848 3 5.116465616650948 8.377606312394454 4 2.2330096461556086 4.875051675357107 5 1.2043627261908325 3.2866688105011463 6 0.7537201252569568 2.4682548275442437 7 0.4958994287112956 1.8946119886190331 8 0.36269097086025676 1.5836359938464655 9 0.25722963079032485 1.2635491412064745 >10 1.4111119255320776 13.778428928519348 >50 0.08049599172936595 2.973083705353137 >100 0.02941592360716292 2.642708668640611 >500 6.579403856838424E-4 0.2538322615924693 >1k 2.819744260833416E-4 0.3425555407028105 >5k 4.699573768055691E-5 0.1734451940271362 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6762 0.1729535618919002 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4410 0.11279580123384796 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3938 0.10072332545553134 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 2.557727919134874E-5 0.0 3 0.0 0.0 0.0 2.557727919134874E-5 0.0 4 0.0 0.0 0.0 2.557727919134874E-5 0.0 5 0.0 0.0 0.0 2.557727919134874E-5 0.0 6 0.0 0.0 0.0 2.557727919134874E-5 2.557727919134874E-5 7 7.673183757404622E-5 0.0 0.0 2.557727919134874E-5 2.557727919134874E-5 8 7.673183757404622E-5 0.0 0.0 2.557727919134874E-5 2.557727919134874E-5 9 7.673183757404622E-5 0.0 0.0 2.557727919134874E-5 5.115455838269748E-5 10-11 7.673183757404622E-5 0.0 0.0 2.557727919134874E-5 5.115455838269748E-5 12-13 7.673183757404622E-5 0.0 0.0 2.557727919134874E-5 1.1509775636106933E-4 14-15 7.673183757404622E-5 1.278863959567437E-5 0.0 2.557727919134874E-5 1.278863959567437E-4 16-17 7.673183757404622E-5 2.557727919134874E-5 0.0 2.557727919134874E-5 1.278863959567437E-4 18-19 7.673183757404622E-5 5.115455838269748E-5 0.0 2.557727919134874E-5 2.0461823353078992E-4 20-21 7.673183757404622E-5 5.115455838269748E-5 0.0 2.557727919134874E-5 3.069273502961849E-4 22-23 7.673183757404622E-5 5.115455838269748E-5 0.0 1.5346367514809244E-4 3.325046294875336E-4 24-25 7.673183757404622E-5 5.115455838269748E-5 0.0 2.0461823353078992E-4 3.5808190867888236E-4 26-27 7.673183757404622E-5 5.115455838269748E-5 0.0 3.069273502961849E-4 4.476023858486029E-4 28-29 7.673183757404622E-5 5.115455838269748E-5 0.0 0.0012149207615890652 4.603910254442773E-4 30-31 7.673183757404622E-5 5.115455838269748E-5 0.0 0.0048852603255476095 4.603910254442773E-4 32-33 7.673183757404622E-5 5.115455838269748E-5 0.0 0.012341037209825767 4.603910254442773E-4 34-35 1.4067503555241807E-4 5.115455838269748E-5 0.0 0.020858271180544896 5.115455838269748E-4 36-37 2.0461823353078992E-4 5.115455838269748E-5 0.0 0.034363074593577035 5.115455838269748E-4 38-39 2.0461823353078992E-4 5.115455838269748E-5 0.0 0.05340535895153617 5.115455838269748E-4 40-41 2.0461823353078992E-4 5.115455838269748E-5 0.0 0.07563201456881823 5.115455838269748E-4 42-43 2.0461823353078992E-4 5.115455838269748E-5 0.0 0.09682279037885066 5.115455838269748E-4 44-45 2.0461823353078992E-4 5.115455838269748E-5 0.0 0.12035388723489149 5.115455838269748E-4 46-47 2.0461823353078992E-4 5.115455838269748E-5 0.0 0.14453720471031173 5.243342234226492E-4 48-49 2.0461823353078992E-4 5.115455838269748E-5 0.0 0.16971803607419456 5.371228630183236E-4 50-51 2.0461823353078992E-4 5.115455838269748E-5 0.0 0.19532089254473467 5.371228630183236E-4 52-53 2.0461823353078992E-4 5.115455838269748E-5 0.0 0.21903103035511495 5.627001422096723E-4 54-55 2.0461823353078992E-4 5.115455838269748E-5 0.0 0.2437131047747665 5.882774214010211E-4 56-57 2.0461823353078992E-4 5.115455838269748E-5 0.0 0.27146445269737984 5.882774214010211E-4 58-59 2.0461823353078992E-4 5.115455838269748E-5 0.0 0.29872983231535766 5.882774214010211E-4 60-61 2.0461823353078992E-4 6.394319797837185E-5 0.0 0.32561155274546516 6.266433401880442E-4 62-63 2.0461823353078992E-4 7.673183757404622E-5 0.0 0.3535675189016093 6.90586538166416E-4 64-65 2.0461823353078992E-4 7.673183757404622E-5 0.0 0.3796819209559764 7.033751777620904E-4 66-67 2.0461823353078992E-4 7.673183757404622E-5 0.0 0.4081750099751389 7.161638173577647E-4 68-69 2.0461823353078992E-4 7.673183757404622E-5 0.0 0.4394048678677757 7.161638173577647E-4 70-71 2.0461823353078992E-4 7.673183757404622E-5 0.0 0.46990577330345906 7.289524569534391E-4 72-73 2.0461823353078992E-4 7.673183757404622E-5 0.0 0.5009565902417564 7.801070153361366E-4 74-75 2.0461823353078992E-4 7.673183757404622E-5 0.0 0.5330944415456862 8.440502133145085E-4 76-77 2.0461823353078992E-4 7.673183757404622E-5 0.0 0.5657182611542515 8.696274925058573E-4 78-79 2.0461823353078992E-4 7.673183757404622E-5 0.0 0.5997999856767237 8.95204771697206E-4 80-81 2.0461823353078992E-4 7.673183757404622E-5 0.0 0.6351733627983589 8.95204771697206E-4 82-83 2.0461823353078992E-4 7.673183757404622E-5 0.0 0.6680785324780292 9.975138884626008E-4 84-85 2.0461823353078992E-4 7.673183757404622E-5 0.0 0.7036821051123865 9.975138884626008E-4 86 2.0461823353078992E-4 7.673183757404622E-5 0.0 0.7316124939893394 9.975138884626008E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 7785 0.0 37.25021 1 GGTATCA 4670 0.0 32.72412 1 TCAACGC 9605 0.0 29.632933 4 GTACCTG 4620 0.0 29.491478 1 TACCTGG 4665 0.0 28.689116 2 TATCAAC 9930 0.0 28.663443 2 CAACGCA 9965 0.0 28.562403 5 ATCAACG 10130 0.0 27.96179 3 AACGCAG 10550 0.0 27.101656 6 GTACATG 11305 0.0 26.588226 1 TACATGG 11640 0.0 25.00384 2 ACATGGG 12150 0.0 22.898045 3 ACGCAGA 12425 0.0 22.895958 7 CGCAGAG 13045 0.0 21.664524 8 GAGTACA 8535 0.0 20.817595 1 ACCTGGG 6400 0.0 20.768444 3 CATGGGG 9510 0.0 19.759855 4 GCAGAGT 14665 0.0 18.83355 9 AGTACAT 8355 0.0 18.761415 2 AGAGTAC 11660 0.0 18.757244 10-11 >>END_MODULE