##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921431_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3909720 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality warn #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.05539041158958 33.0 31.0 34.0 30.0 34.0 2 32.17058715202111 34.0 31.0 34.0 30.0 34.0 3 32.29359621660886 34.0 31.0 34.0 30.0 34.0 4 35.80586205661786 37.0 35.0 37.0 35.0 37.0 5 35.62473143856849 37.0 35.0 37.0 35.0 37.0 6 35.66050254238155 37.0 35.0 37.0 35.0 37.0 7 35.59865796016083 37.0 35.0 37.0 35.0 37.0 8 35.55411947658656 37.0 35.0 37.0 35.0 37.0 9 37.20598380446682 39.0 38.0 39.0 34.0 39.0 10-11 37.12192625047318 39.0 37.0 39.0 34.0 39.0 12-13 37.011719253552684 39.0 37.0 39.0 34.0 39.0 14-15 38.34731643186724 40.0 38.0 41.0 34.0 41.0 16-17 38.26010021177987 40.0 38.0 41.0 33.5 41.0 18-19 38.17053817153146 40.0 38.0 41.0 33.5 41.0 20-21 38.07046246278506 40.0 38.0 41.0 33.0 41.0 22-23 38.03915958176033 40.0 38.0 41.0 33.5 41.0 24-25 38.09097441760535 40.0 38.0 41.0 33.5 41.0 26-27 37.99310295877966 40.0 38.0 41.0 33.0 41.0 28-29 37.86897015643064 40.0 38.0 41.0 33.0 41.0 30-31 37.74201221570854 40.0 38.0 41.0 33.0 41.0 32-33 37.59033575294394 40.0 38.0 41.0 33.0 41.0 34-35 37.45280493232252 40.0 37.5 41.0 32.0 41.0 36-37 37.36005289381337 40.0 37.0 41.0 32.0 41.0 38-39 37.336956099158 40.0 37.0 41.0 32.0 41.0 40-41 37.1910648332873 40.0 37.0 41.0 31.5 41.0 42-43 36.977946758335634 40.0 37.0 41.0 31.0 41.0 44-45 36.78618865289586 40.0 36.5 41.0 31.0 41.0 46-47 36.52806262341037 39.5 36.0 41.0 30.0 41.0 48-49 36.21833494470192 39.0 35.5 40.5 30.0 41.0 50-51 35.96920585105839 39.0 35.0 40.0 29.0 41.0 52-53 35.68600782153197 39.0 35.0 40.0 28.5 41.0 54-55 35.38557096160339 38.0 35.0 40.0 28.0 41.0 56-57 35.03224131139826 38.0 34.0 40.0 27.5 41.0 58-59 34.66418490326673 38.0 34.0 40.0 26.5 41.0 60-61 34.272366179675274 37.0 34.0 40.0 26.0 41.0 62-63 33.859364609230326 36.5 33.0 39.0 25.5 41.0 64-65 33.374693967854476 36.0 33.0 39.0 24.5 40.0 66-67 32.86793939207922 35.0 32.0 38.5 23.0 40.0 68-69 32.38393312053037 35.0 32.0 38.0 22.0 40.0 70-71 31.856819286291604 35.0 31.0 37.0 20.5 39.0 72-73 31.33122525398238 34.5 31.0 36.5 19.5 39.0 74-75 30.834304374737833 34.0 30.0 36.0 18.0 38.5 76-77 29.467129231760843 32.5 28.5 34.5 17.0 36.5 78-79 30.399396120438293 34.0 30.0 35.0 18.0 37.0 80-81 30.43731303008911 34.0 31.0 35.0 18.0 37.0 82-83 30.12262591694546 34.0 30.0 35.0 14.0 36.0 84-85 29.663925421769335 34.0 30.0 35.0 7.5 36.0 86-87 29.18332719478633 34.0 29.0 35.0 4.5 35.5 88-89 28.667463782572664 34.0 29.0 35.0 2.0 35.0 90-91 28.24222578598979 33.0 28.5 35.0 2.0 35.0 92-93 27.850726394729033 33.0 27.0 35.0 2.0 35.0 94-95 27.414185286925917 33.0 27.0 35.0 2.0 35.0 96-97 26.723487871254207 33.0 25.5 34.0 2.0 35.0 98-99 25.79133249951403 32.0 24.5 34.0 2.0 35.0 100-101 22.186928347810074 28.5 8.5 32.5 2.0 34.5 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 23323.0 3 12693.0 4 7251.0 5 5539.0 6 4631.0 7 4874.0 8 5518.0 9 6599.0 10 7974.0 11 9234.0 12 11143.0 13 12974.0 14 14368.0 15 16351.0 16 18714.0 17 22169.0 18 22542.0 19 19267.0 20 19244.0 21 20030.0 22 21684.0 23 23753.0 24 27432.0 25 32351.0 26 38534.0 27 46209.0 28 56637.0 29 69329.0 30 85561.0 31 107894.0 32 139862.0 33 189226.0 34 273400.0 35 425307.0 36 691327.0 37 934337.0 38 464988.0 39 17451.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.16072263910461 17.646865615495212 13.541836399798926 24.650575345601247 2 15.984341589679058 19.110498961562463 38.674636546862686 26.230522901895785 3 19.789628073668542 22.640535501477572 28.521659146014393 29.048177278839493 4 13.898109875484687 15.200542594986116 34.997914080595834 35.90343344893336 5 15.252143838403681 35.818106434443834 33.14301148453344 15.78673824261905 6 34.64618682785172 33.649299652782574 16.63807740957272 15.066436109792985 7 30.868098146946014 30.64598866747623 19.526384875770226 18.959528309807528 8 27.86778248548873 33.82428439706633 19.034606583221798 19.27332653422314 9 26.88564831954137 16.308362379150708 19.137314901720423 37.668674399587495 10-11 26.41072262749334 25.100222509012184 26.370729637788205 22.118325225706275 12-13 26.502718354554748 22.21478591829741 26.992558561213446 24.289937165934393 14-15 23.662405534800396 23.731242451966125 24.54471846545504 28.061633547778435 16-17 24.019870735314434 26.903251063132956 25.1430943693613 23.933783832191306 18-19 24.019329891631426 26.148345608554852 26.650271842593316 23.18205265722041 20-21 24.50333946944587 25.33568032175574 26.60701972979784 23.55396047900055 22-23 24.368124212674132 24.98357858622055 26.486109159988708 24.16218804111661 24-25 24.080938793389308 25.24941560807464 26.60650210217341 24.063143496362645 26-27 24.120962912119186 25.38684641599283 26.56402098724152 23.928169684646463 28-29 24.149690364477166 25.527562364909024 26.418316945354203 23.90443032525961 30-31 24.24989190033268 25.414324507208114 26.321581579023768 24.014202013435437 32-33 24.0268986835862 25.418949043160417 26.359635604178045 24.194516669075337 34-35 24.20720931924974 25.429068439535214 26.44222388233604 23.921498358879006 36-37 24.25343459352631 25.509116921859302 26.276805203223415 23.96064328139097 38-39 24.264688765250153 25.517100151212862 26.257355030967812 23.960856052569174 40-41 24.32543267668135 25.371342204298426 26.262847462370754 24.04037765664947 42-43 24.307117426890354 25.381812796435828 26.213566033937724 24.097503742736098 44-45 24.252624103895894 25.44415094455461 26.2018999555913 24.101324995958194 46-47 24.269783165869384 25.4978506931457 26.140033187487816 24.092332953497095 48-49 24.249882948578072 25.58231883438909 26.02284910258871 24.144949114444124 50-51 24.20622861904959 25.707416257784367 25.90092233205898 24.185432791107058 52-53 24.300134194473152 25.6809317621168 25.898011433067293 24.120922610342756 54-55 24.29969161376943 25.460619399364965 25.96427129445098 24.27541769241463 56-57 24.25922254976564 25.641393246068944 25.941540960334564 24.15784324383085 58-59 24.32829577276919 25.564744894285656 25.933894310853095 24.173065022092054 60-61 24.384455006173418 25.525149871991403 25.974222298844634 24.116172822990546 62-63 24.181722624181994 25.607673252604847 26.00603743331445 24.204566689898716 64-65 24.264121512962333 25.420859186334216 25.99436799564542 24.320651305058036 66-67 24.224191157599755 25.639299135882045 25.902608064640354 24.23390164187785 68-69 24.233727028830693 25.638259549819146 25.892865940700617 24.235147480649545 70-71 24.240677784002397 25.434448392386184 25.99298835314552 24.3318854704659 72-73 24.37626505367499 25.469478673155542 25.79142371964607 24.362832553523393 74-75 24.15789720838147 25.663664047142476 25.808342035295695 24.370096709180352 76-77 24.295895622820463 25.509073269961696 25.8737078002436 24.32132330697424 78-79 24.23329223269633 25.46902465039928 25.996481403220283 24.301201713684108 80-81 24.22584535546872 25.651921552312295 25.797738998030223 24.324494094188758 82-83 24.350575669866554 25.58537288634713 25.720345281671563 24.343706162114753 84-85 24.26316782481061 25.63316523457611 25.747928611858157 24.35573832875512 86-87 24.301561134567432 25.593311160975794 25.823796978882914 24.281330725573863 88-89 24.25704286066417 25.48277764640971 25.790526095034274 24.469653397891843 90-91 24.22437339851149 25.54436682639772 25.80548412928009 24.425775645810706 92-93 24.265537088219485 25.642997714425654 25.80108018114165 24.290385016213207 94-95 24.27988160254281 25.519133559601414 25.756793062419575 24.444191775436195 96-97 24.253861862209057 25.484293885082685 25.85181074569882 24.410033507009434 98-99 24.214713356977775 25.54135581644308 25.798345230162393 24.445585596416755 100-101 24.60754947677527 24.98857883926219 25.967460563102872 24.43641112085967 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 370.0 1 342.5 2 707.5 3 1074.5 4 780.5 5 599.0 6 1120.0 7 2489.0 8 3685.5 9 3495.0 10 2343.0 11 1474.0 12 1268.0 13 1297.0 14 1373.5 15 1375.0 16 1457.5 17 1605.5 18 1734.0 19 1780.0 20 1878.0 21 2024.5 22 2144.0 23 2460.5 24 2811.0 25 3338.5 26 4231.5 27 5561.5 28 7504.0 29 10260.5 30 14083.5 31 18571.5 32 24188.0 33 30705.0 34 37384.5 35 45075.0 36 54020.5 37 63488.5 38 73490.5 39 82958.5 40 93408.5 41 104352.5 42 114851.5 43 126897.0 44 138489.0 45 149469.5 46 157990.0 47 166363.5 48 176695.0 49 180964.0 50 177627.0 51 173840.5 52 172482.0 53 170827.5 54 168375.5 55 161796.0 56 149349.5 57 135480.5 58 123538.5 59 111745.0 60 97043.5 61 81212.5 62 65727.5 63 49870.5 64 36318.5 65 27004.0 66 20470.5 67 15941.0 68 12106.5 69 9009.0 70 6741.0 71 4978.5 72 3636.0 73 2739.5 74 2029.5 75 1442.0 76 1050.0 77 664.0 78 376.0 79 180.5 80 110.5 81 73.5 82 30.5 83 19.0 84 12.5 85 7.0 86 5.5 87 3.5 88 2.0 89 1.0 90 0.5 91 1.0 92 1.5 93 1.0 94 1.5 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.3240897046335799 2 0.0 3 0.006726824427324718 4 0.06573360752176627 5 6.90586538166416E-4 6 0.06798440809060495 7 0.0789826381428849 8 0.11016134147713902 9 0.09775636106933489 10-11 0.10321711017668785 12-13 0.1011965051205713 14-15 0.06802277400939198 16-17 0.03734282761936916 18-19 0.040309792005565614 20-21 0.029797530257921284 22-23 0.04381387925478039 24-25 0.03539895440082666 26-27 0.022226655617282057 28-29 0.02587141790204925 30-31 0.003414566772045057 32-33 0.006010660609966954 34-35 0.008939259077376385 36-37 0.011535352915298282 38-39 0.016906581545481518 40-41 0.021114043972458384 42-43 0.003759860041128265 44-45 0.014732512814216874 46-47 0.026037670216793016 48-49 0.002903021188218082 50-51 0.007212792731960346 52-53 0.0024426301627738047 54-55 0.004463235218890355 56-57 0.003708705482745567 58-59 0.001445116274311204 60-61 0.005550269584522677 62-63 0.015563774387935709 64-65 0.007084906336003601 66-67 0.040233060167991566 68-69 0.06426291396826371 70-71 0.01304441238758786 72-73 0.032969112877648525 74-75 0.05311122024083566 76-77 0.31697922101838494 78-79 0.0779851242544223 80-81 0.0360255977410147 82-83 0.02923483011571161 84-85 0.020653652947014108 86-87 0.12040504179327419 88-89 0.5410745526533869 90-91 0.13669776863816335 92-93 0.049862905783534375 94-95 0.00883694996061099 96-97 0.006125758366328024 98-99 0.010614570864409728 100-101 0.00792895654931811 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3909720.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.64548070596716 #Duplication Level Percentage of deduplicated Percentage of total 1 70.43102626195417 36.37444207913221 2 16.18815760128168 16.720903621242975 3 5.650908361715906 8.75531636298562 4 2.5570283406712453 5.282358313309921 5 1.3913555876843218 3.592861407944512 6 0.8162084012628026 2.5292085143679826 7 0.555313294439286 2.0075595423611845 8 0.39223634253057976 1.6205787568273746 9 0.2967571074696001 1.379354712136187 >10 1.5906778503673786 14.697031840062651 >50 0.09461242306054676 3.319042441534687 >100 0.034431213067596604 2.890689683753896 >500 9.406567633348087E-4 0.3304763999138058 >1k 2.970494841290141E-4 0.33850497694973936 >5k 4.950824735483561E-5 0.1616713474773926 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6323 0.1617251363268981 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4164 0.10650379055277615 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3926 0.10041639810523516 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 5.115455838269748E-5 2 0.0 0.0 0.0 0.0 5.115455838269748E-5 3 0.0 0.0 0.0 0.0 5.115455838269748E-5 4 0.0 0.0 0.0 0.0 7.673183757404622E-5 5 0.0 0.0 0.0 2.557727919134874E-5 7.673183757404622E-5 6 0.0 0.0 0.0 2.557727919134874E-5 7.673183757404622E-5 7 0.0 0.0 0.0 2.557727919134874E-5 7.673183757404622E-5 8 0.0 0.0 0.0 2.557727919134874E-5 1.278863959567437E-4 9 0.0 0.0 0.0 2.557727919134874E-5 1.278863959567437E-4 10-11 0.0 0.0 0.0 5.115455838269748E-5 1.278863959567437E-4 12-13 0.0 2.557727919134874E-5 0.0 5.115455838269748E-5 2.0461823353078992E-4 14-15 0.0 2.557727919134874E-5 0.0 7.673183757404622E-5 2.8135007110483614E-4 16-17 0.0 2.557727919134874E-5 0.0 8.952047716972059E-5 3.5808190867888236E-4 18-19 0.0 3.836591878702311E-5 0.0 1.0230911676539496E-4 3.9644782746590544E-4 20-21 0.0 6.394319797837185E-5 0.0 1.4067503555241807E-4 4.603910254442773E-4 22-23 0.0 7.673183757404622E-5 0.0 2.685614315091618E-4 4.603910254442773E-4 24-25 0.0 7.673183757404622E-5 0.0 3.069273502961849E-4 4.603910254442773E-4 26-27 0.0 7.673183757404622E-5 0.0 3.9644782746590544E-4 4.731796650399517E-4 28-29 0.0 1.0230911676539496E-4 0.0 0.001278863959567437 4.8596830463562606E-4 30-31 0.0 1.0230911676539496E-4 0.0 0.0048852603255476095 4.8596830463562606E-4 32-33 0.0 1.0230911676539496E-4 0.0 0.012213150813869023 4.8596830463562606E-4 34-35 1.278863959567437E-5 1.0230911676539496E-4 0.0 0.020653652947014108 5.115455838269748E-4 36-37 2.557727919134874E-5 1.1509775636106933E-4 0.0 0.03400499268489815 5.115455838269748E-4 38-39 2.557727919134874E-5 1.278863959567437E-4 0.0 0.05320074071800539 5.371228630183236E-4 40-41 2.557727919134874E-5 1.278863959567437E-4 0.0 0.07560643728962688 5.371228630183236E-4 42-43 2.557727919134874E-5 1.278863959567437E-4 0.0 0.09678442446006363 5.371228630183236E-4 44-45 2.557727919134874E-5 1.278863959567437E-4 0.0 0.12046898499125257 5.371228630183236E-4 46-47 2.557727919134874E-5 1.278863959567437E-4 0.0 0.14478018886262956 5.371228630183236E-4 48-49 2.557727919134874E-5 1.278863959567437E-4 0.0 0.16976919063257728 5.371228630183236E-4 50-51 2.557727919134874E-5 1.278863959567437E-4 0.0 0.1951546402299909 5.371228630183236E-4 52-53 2.557727919134874E-5 1.278863959567437E-4 0.0 0.2186601598068404 5.499115026139979E-4 54-55 2.557727919134874E-5 1.662523147437668E-4 0.0 0.24306088415538707 5.627001422096723E-4 56-57 2.557727919134874E-5 2.0461823353078992E-4 0.0 0.2707099229612351 5.88277421401021E-4 58-59 2.557727919134874E-5 2.0461823353078992E-4 0.0 0.2977195297872993 6.138547005923698E-4 60-61 5.115455838269748E-5 2.174068731264643E-4 0.0 0.3246140388570026 6.394319797837186E-4 62-63 5.115455838269748E-5 2.3019551272213866E-4 0.0 0.35246769589638133 6.90586538166416E-4 64-65 5.115455838269748E-5 2.3019551272213866E-4 0.0 0.3786204638695354 6.90586538166416E-4 66-67 5.115455838269748E-5 2.3019551272213866E-4 0.0 0.40678104825921035 7.033751777620904E-4 68-69 5.115455838269748E-5 2.3019551272213866E-4 0.0 0.4374098400908505 7.289524569534391E-4 70-71 5.115455838269748E-5 2.3019551272213866E-4 0.0 0.4678979568869382 7.417410965491135E-4 72-73 5.115455838269748E-5 2.3019551272213866E-4 0.0 0.4988720419876615 7.545297361447878E-4 74-75 5.115455838269748E-5 2.3019551272213866E-4 0.0 0.5306901773016994 8.184729341231597E-4 76-77 5.115455838269748E-5 2.3019551272213866E-4 0.0 0.5629175490827988 8.440502133145085E-4 78-79 5.115455838269748E-5 2.3019551272213866E-4 0.0 0.5966156144174007 8.440502133145085E-4 80-81 5.115455838269748E-5 2.3019551272213866E-4 0.0 0.6315669664323788 8.824161321015316E-4 82-83 6.394319797837185E-5 2.3019551272213866E-4 0.0 0.6641140542033701 9.463593300799034E-4 84-85 7.673183757404622E-5 2.3019551272213866E-4 0.0 0.6996281063605578 9.463593300799034E-4 86-87 7.673183757404622E-5 2.3019551272213866E-4 0.0 0.736970933979927 9.591479696755777E-4 88-89 7.673183757404622E-5 2.3019551272213866E-4 0.0 0.7746974207871664 9.719366092712521E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 7925 0.0 38.41703 1 GGTATCA 4750 0.0 35.307854 1 GTACCTG 4415 0.0 31.296051 1 TCAACGC 9810 0.0 30.267303 4 TATCAAC 10275 0.0 29.266304 2 CAACGCA 10105 0.0 29.22468 5 ATCAACG 10325 0.0 28.849627 3 TACCTGG 4910 0.0 27.477856 2 AACGCAG 10925 0.0 27.337116 6 GTACATG 10900 0.0 27.232264 1 TACATGG 11700 0.0 25.05217 2 ACGCAGA 12470 0.0 23.799032 7 ACATGGG 11955 0.0 23.127895 3 CGCAGAG 13390 0.0 22.128387 8 CATGGGG 9305 0.0 21.188217 4 ACCTGGG 6335 0.0 20.472872 3 GAGTACA 8655 0.0 19.762852 1 GCAGAGT 15065 0.0 19.541218 9 AGAGTAC 12005 0.0 19.419964 10-11 AGTACAT 8210 0.0 19.2106 2 >>END_MODULE