##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921430_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3030931 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.922200142464476 33.0 31.0 34.0 30.0 34.0 2 32.0446951778183 34.0 31.0 34.0 30.0 34.0 3 32.167726022136435 34.0 31.0 34.0 30.0 34.0 4 35.70301468426698 37.0 35.0 37.0 35.0 37.0 5 35.50107277268931 37.0 35.0 37.0 33.0 37.0 6 35.5368812421002 37.0 35.0 37.0 33.0 37.0 7 35.4704168455171 37.0 35.0 37.0 33.0 37.0 8 35.42689589436381 37.0 35.0 37.0 33.0 37.0 9 37.05395602869218 39.0 37.0 39.0 34.0 39.0 10-11 36.96434313417231 39.0 37.0 39.0 33.0 39.0 12-13 36.84908020011014 39.0 37.0 39.0 33.0 39.0 14-15 38.147040298838874 40.0 38.0 41.0 33.0 41.0 16-17 38.051456796608036 40.0 38.0 41.0 33.0 41.0 18-19 37.96173865389875 40.0 38.0 41.0 33.0 41.0 20-21 37.85506977888972 40.0 38.0 41.0 33.0 41.0 22-23 37.821404710301884 40.0 38.0 41.0 33.0 41.0 24-25 37.872521677332806 40.0 38.0 41.0 33.0 41.0 26-27 37.76540195075374 40.0 38.0 41.0 33.0 41.0 28-29 37.63723456588091 40.0 38.0 41.0 32.5 41.0 30-31 37.498616431716854 40.0 38.0 41.0 32.0 41.0 32-33 37.33570477190012 40.0 37.0 41.0 32.0 41.0 34-35 37.18824941907289 40.0 37.0 41.0 31.0 41.0 36-37 37.089559610561906 40.0 37.0 41.0 31.0 41.0 38-39 37.05865953398477 40.0 37.0 41.0 31.0 41.0 40-41 36.90374195255517 40.0 37.0 41.0 31.0 41.0 42-43 36.67568133355725 40.0 36.0 41.0 30.0 41.0 44-45 36.47090662901927 39.0 36.0 41.0 30.0 41.0 46-47 36.19859986914911 39.0 35.5 40.5 30.0 41.0 48-49 35.87507072909281 39.0 35.0 40.0 29.0 41.0 50-51 35.60671852971909 39.0 35.0 40.0 28.0 41.0 52-53 35.30881122005087 38.0 35.0 40.0 27.5 41.0 54-55 34.99548752512017 38.0 34.0 40.0 27.0 41.0 56-57 34.62915421037299 38.0 34.0 40.0 26.0 41.0 58-59 34.25230712939357 37.0 33.5 40.0 26.0 41.0 60-61 33.84868939609645 37.0 33.0 39.5 25.0 41.0 62-63 33.4215025020365 36.0 33.0 39.0 23.5 40.0 64-65 32.920466846655366 35.5 32.0 39.0 22.5 40.0 66-67 32.40603662702978 35.0 31.5 38.0 21.5 40.0 68-69 31.920353845072682 35.0 31.0 38.0 20.0 40.0 70-71 31.380437231992413 35.0 30.5 37.0 18.0 39.0 72-73 30.842536831092495 34.0 30.0 36.0 17.5 39.0 74-75 30.325136896880856 34.0 29.5 36.0 13.0 38.5 76-77 29.001337542821002 32.5 28.0 34.5 11.5 36.0 78-79 29.951927477068928 34.0 30.0 35.0 11.0 37.0 80-81 29.98873349475788 34.0 30.0 35.0 9.5 37.0 82-83 29.657897523896125 34.0 30.0 35.0 7.0 36.0 84-85 29.176758890255172 34.0 29.0 35.0 3.5 36.0 86-87 28.661768446724786 33.5 29.0 35.0 2.0 35.0 88-89 28.11904098113748 33.0 27.5 35.0 2.0 35.0 90-91 27.658203205549714 33.0 27.0 35.0 2.0 35.0 92-93 27.23259635405755 33.0 26.0 34.0 2.0 35.0 94-95 26.75886188105239 32.5 25.0 34.0 2.0 35.0 96-97 26.00833621748565 32.0 24.5 34.0 2.0 35.0 98-99 25.009303082122294 32.0 20.5 34.0 2.0 35.0 100-101 21.395036046680048 27.5 2.0 32.5 2.0 34.5 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 21176.0 3 10887.0 4 6238.0 5 4682.0 6 3935.0 7 4064.0 8 4760.0 9 5539.0 10 6706.0 11 7899.0 12 9247.0 13 10933.0 14 12266.0 15 13684.0 16 15638.0 17 18742.0 18 18761.0 19 16352.0 20 16226.0 21 16990.0 22 18041.0 23 20496.0 24 23307.0 25 27708.0 26 32792.0 27 39211.0 28 48599.0 29 59077.0 30 72715.0 31 91430.0 32 118514.0 33 159750.0 34 229842.0 35 349290.0 36 543551.0 37 672130.0 38 291338.0 39 8415.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.59914194711542 17.99309493161626 13.880074498743737 24.527688622524582 2 16.0461587545213 19.2851305423977 38.496422386388865 26.172288316692132 3 19.75756559910095 22.441811586408416 28.672167160822475 29.128455653668155 4 14.008814790359855 15.309706173654671 34.98283261802575 35.69864641795972 5 15.347906490284288 35.781306965058405 33.30264952992743 15.568137014729874 6 34.871754408148185 33.72378212825187 16.418030678842772 14.986432784757179 7 30.725302242285128 30.763965746314586 19.584269930029294 18.926462081370993 8 27.687756976534118 33.91110977532213 19.068736361603655 19.332396886540103 9 26.689318493513714 16.225469006085877 19.370085916888776 37.71512658351163 10-11 26.36892559417904 25.168686824486937 26.391894379912962 22.07049320142106 12-13 26.36479133112089 22.21496043463285 27.05104677071902 24.36920146352724 14-15 23.66571529030735 23.831251475348676 24.628261655460896 27.874771578883077 16-17 23.90217844761349 26.921191842274112 25.321912138630644 23.854717571481757 18-19 23.87568063991498 26.272820363871602 26.75878014144603 23.092718854767387 20-21 24.473400217814596 25.414210752120393 26.694597538035048 23.417791492029966 22-23 24.34195043491492 25.046646948367034 26.562239555225926 24.049163061492116 24-25 24.014072943989582 25.247567804840216 26.726283054627544 24.012076196542655 26-27 23.96175106379503 25.523259775867558 26.657534477123022 23.85745468321439 28-29 24.022808840983444 25.58072765799675 26.588275438634412 23.808188062385394 30-31 24.20757195275374 25.52218970101718 26.392442630647643 23.877795715581442 32-33 24.02604215815213 25.472172491683654 26.339062115404033 24.162723234760183 34-35 24.172402796500432 25.46983526832681 26.48914868810725 23.868613247065504 36-37 24.22830709562335 25.413223515459926 26.395159891948555 23.96330949696817 38-39 24.163297240628992 25.55501071297638 26.40592759394107 23.875764452453556 40-41 24.30851019946837 25.46190894975918 26.329659885721075 23.899920965051372 42-43 24.30246645959413 25.395123831092686 26.18266595662827 24.119743752684915 44-45 24.22251150389623 25.47029445684616 26.233354616985018 24.0738394222726 46-47 24.27562650826063 25.466641915723038 26.190211001794445 24.06752057422189 48-49 24.30031888796689 25.6029259166998 26.023633673117562 24.07312152221575 50-51 24.26179814690226 25.768920737688774 25.928982294242044 24.040298821166928 52-53 24.32396674145841 25.65911562079482 25.88151120779066 24.135406429956113 54-55 24.349070699615265 25.516418676709772 25.967998894021925 24.16651172965303 56-57 24.316278606311855 25.711824335415333 25.901805830531426 24.07009122774139 58-59 24.321193049890503 25.61741404126679 25.971881173418677 24.08951173542403 60-61 24.358839840620625 25.61547349902137 25.958077786532467 24.06760887382554 62-63 24.224896786271895 25.698292038217662 25.927017916447987 24.149793259062456 64-65 24.30272436553114 25.530945741017657 25.930553227545627 24.235776665905572 66-67 24.289176390402815 25.61321630468596 25.85265909561621 24.244948209295014 68-69 24.252987990265705 25.668927360725657 25.896388826392926 24.181695822615712 70-71 24.187525325385835 25.518271234717325 25.98326841675257 24.310935023144268 72-73 24.350704321575005 25.55117482640728 25.790734262791602 24.307386589226113 74-75 24.26483149003075 25.723111629220462 25.69818912418191 24.31386775656687 76-77 24.32873994835048 25.58532645335012 25.7770015677545 24.308932030544902 78-79 24.26480032304641 25.55449311528801 25.881303556977375 24.299403004688198 80-81 24.24182267184497 25.668893602941967 25.848847215999616 24.240436509213442 82-83 24.3540756073445 25.603697729033858 25.753413445735358 24.288813217886286 84-85 24.348245038712683 25.6430018108544 25.672024980715847 24.33672816971707 86-87 24.31968053285925 25.61977028306826 25.832914642166877 24.22763454190562 88-89 24.23437462166104 25.51746818967482 25.793703311935722 24.45445387672842 90-91 24.258117225820115 25.583454771125965 25.79191701682928 24.366510986224643 92-93 24.33701325998237 25.595821160483233 25.87466683347343 24.192498746060963 94-95 24.325679385484445 25.562547019150816 25.75341177557512 24.358361819789618 96-97 24.27803539576568 25.452807515479627 25.850909244486033 24.418247844268663 98-99 24.19667747469863 25.534177616996413 25.776026098980193 24.49311880932477 100-101 24.682563827091407 25.061768152973844 25.913521946171958 24.342146073762787 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 353.0 1 299.5 2 430.5 3 605.0 4 477.0 5 410.5 6 769.0 7 1665.0 8 2468.5 9 2342.5 10 1582.5 11 1065.0 12 964.0 13 991.0 14 1048.0 15 1088.5 16 1142.5 17 1258.0 18 1376.5 19 1431.0 20 1487.5 21 1580.5 22 1714.0 23 1904.0 24 2210.5 25 2621.0 26 3285.5 27 4364.5 28 5877.0 29 8018.5 30 11056.5 31 14865.0 32 19730.0 33 25303.0 34 30968.5 35 37542.5 36 45160.0 37 52987.0 38 60167.0 39 67357.0 40 75096.0 41 83232.5 42 90749.0 43 98719.5 44 107074.0 45 114238.5 46 121396.5 47 127893.0 48 134140.0 49 136915.5 50 134161.0 51 132229.5 52 131661.0 53 129654.0 54 127236.5 55 122450.0 56 113259.5 57 103048.0 58 94152.5 59 84823.5 60 74156.5 61 63415.0 62 52206.0 63 39645.0 64 29092.5 65 21979.0 66 16944.0 67 13167.5 68 10086.5 69 7634.5 70 5656.0 71 4241.0 72 3145.5 73 2401.0 74 1796.5 75 1296.0 76 931.5 77 547.0 78 308.5 79 177.5 80 90.0 81 38.5 82 21.5 83 14.5 84 9.0 85 5.0 86 3.5 87 1.0 88 0.5 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.31910987086146136 2 0.0 3 0.005707817169048058 4 0.06370979741868092 5 5.278906052298782E-4 6 0.063940749558469 7 0.07373971891804862 8 0.10472029881247709 9 0.0914570473560764 10-11 0.0959606140819438 12-13 0.0958121448492229 14-15 0.06552442137415863 16-17 0.0352037047362675 18-19 0.038057613320791536 20-21 0.0274173183091268 22-23 0.04150539883619917 24-25 0.033108638896761425 26-27 0.020604230185378686 28-29 0.02317769688587434 30-31 0.00290339832876433 32-33 0.00504795391251071 34-35 0.007077033426363054 36-37 0.011135192454067744 38-39 0.016298622436472492 40-41 0.020653719929618983 42-43 0.003596254748128545 44-45 0.01438501899251418 46-47 0.024530416561775903 48-49 0.0028374120031105956 50-51 0.00732448214756456 52-53 0.0023260179792941506 54-55 0.004272614586079327 56-57 0.0036127513295419788 58-59 0.0014352025829687315 60-61 0.005773803494701793 62-63 0.014764440365023156 64-65 0.006829584705161549 66-67 0.03921237401973189 68-69 0.06092187515981064 70-71 0.01237243606007527 72-73 0.03279520384990618 74-75 0.05082596733478922 76-77 0.31053164852647586 78-79 0.07469652064002777 80-81 0.032448775640224074 82-83 0.028209154216971618 84-85 0.019581442137745795 86-87 0.12009511268979728 88-89 0.5314538668151799 90-91 0.132104623958777 92-93 0.04874739807669657 94-95 0.008281283869543715 96-97 0.005707817169048058 98-99 0.010376349709049793 100-101 0.008017338566928775 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3030931.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.59798519914439 #Duplication Level Percentage of deduplicated Percentage of total 1 74.4369671255282 43.61856297890899 2 14.685300132943146 17.210579996703913 3 4.886968978447688 8.590996076032662 4 2.0226688846883696 4.740972854709558 5 1.0974415361742829 3.2153931446833455 6 0.6653783924241377 2.3393899914660063 7 0.4327024667688565 1.7748844920348301 8 0.3152902587982826 1.4780299134796935 9 0.22668164296780635 1.1954778803590722 >10 1.1606698410567646 11.944862672809927 >50 0.05554464562890023 2.172070794500841 >100 0.013878782144604269 1.2352120957072186 >500 3.3820828610188003E-4 0.12911638176021897 >1k 1.691041428324909E-4 0.354450726843716 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4654 0.15355017979624083 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3223 0.1063369637909936 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 9.897948848060216E-5 2 0.0 0.0 0.0 0.0 9.897948848060216E-5 3 0.0 0.0 0.0 0.0 9.897948848060216E-5 4 0.0 0.0 0.0 0.0 9.897948848060216E-5 5 0.0 0.0 0.0 0.0 9.897948848060216E-5 6 0.0 0.0 0.0 0.0 1.3197265130746955E-4 7 0.0 0.0 0.0 0.0 1.3197265130746955E-4 8 0.0 0.0 0.0 0.0 1.3197265130746955E-4 9 0.0 0.0 0.0 0.0 1.6496581413433695E-4 10-11 0.0 0.0 0.0 0.0 1.8146239554777064E-4 12-13 0.0 0.0 0.0 0.0 4.1241453533584233E-4 14-15 0.0 1.6496581413433694E-5 0.0 0.0 4.7840086098957713E-4 16-17 0.0 3.299316282686739E-5 0.0 0.0 4.948974424030108E-4 18-19 0.0 3.299316282686739E-5 0.0 0.0 5.278906052298782E-4 20-21 0.0 3.299316282686739E-5 0.0 3.299316282686739E-5 6.433666751239141E-4 22-23 0.0 4.948974424030108E-5 0.0 8.248290706716846E-5 6.928564193642152E-4 24-25 0.0 6.598632565373477E-5 0.0 2.639453026149391E-4 7.588427450179499E-4 26-27 0.0 6.598632565373477E-5 0.0 4.1241453533584233E-4 8.578222334985521E-4 28-29 0.0 8.248290706716846E-5 0.0 0.0013362230944881292 8.578222334985521E-4 30-31 0.0 9.897948848060216E-5 0.0 0.00504795391251071 8.908153963254195E-4 32-33 0.0 9.897948848060216E-5 0.0 0.013246754874987256 9.238085591522869E-4 34-35 0.0 1.3197265130746955E-4 0.0 0.022633309699231028 9.568017219791543E-4 36-37 0.0 1.9795897696120432E-4 0.0 0.03655642441216907 9.568017219791543E-4 38-39 0.0 3.134350468552402E-4 0.0 0.05780402127267166 9.568017219791543E-4 40-41 0.0 3.9591795392240865E-4 0.0 0.0811301873912669 9.568017219791543E-4 42-43 0.0 4.2891111674927607E-4 0.0 0.10495125095226517 9.897948848060216E-4 44-45 0.0 4.2891111674927607E-4 0.0 0.12928370853707985 0.0010227880476328891 46-47 0.0 4.2891111674927607E-4 0.0 0.15620612940380363 0.0010392846290463228 48-49 0.0 4.2891111674927607E-4 0.0 0.1835409648058633 0.0011217675361134911 50-51 0.0 4.2891111674927607E-4 0.0 0.21006746771866466 0.0011217675361134911 52-53 0.0 4.6190427957614345E-4 0.0 0.2351587680484973 0.0012702367688343943 54-55 0.0 4.948974424030108E-4 0.0 0.2652815257094272 0.0014187060015552976 56-57 0.0 4.948974424030108E-4 3.299316282686739E-5 0.294826903020887 0.0014352025829687315 58-59 0.0 4.948974424030108E-4 3.299316282686739E-5 0.3247846948676826 0.0014681957457955987 60-61 0.0 4.948974424030108E-4 3.299316282686739E-5 0.35436306534196915 0.0014846923272090326 62-63 0.0 4.948974424030108E-4 3.299316282686739E-5 0.3821927981864318 0.0015176854900358998 64-65 0.0 4.948974424030108E-4 3.299316282686739E-5 0.4110783122413542 0.0015176854900358998 66-67 0.0 4.948974424030108E-4 3.299316282686739E-5 0.4434281083930977 0.0015176854900358998 68-69 0.0 4.948974424030108E-4 3.299316282686739E-5 0.4773945695233577 0.0015176854900358998 70-71 0.0 4.948974424030108E-4 3.299316282686739E-5 0.5100907938847833 0.0016001683971030682 72-73 0.0 4.948974424030108E-4 3.299316282686739E-5 0.5447996011786478 0.0016826513041702368 74-75 0.0 4.948974424030108E-4 3.299316282686739E-5 0.5790465041929361 0.0017156444669971043 76-77 0.0 4.948974424030108E-4 3.299316282686739E-5 0.6176485047003709 0.001732141048410538 78-79 0.0 5.113940238164446E-4 3.299316282686739E-5 0.6582300949774178 0.0018146239554777063 80-81 0.0 5.278906052298782E-4 3.299316282686739E-5 0.698481753626196 0.0018641136997180074 82-83 0.0 5.278906052298782E-4 3.299316282686739E-5 0.7389973575775892 0.001946596606785176 84-85 0.0 5.278906052298782E-4 3.299316282686739E-5 0.7785891529698301 0.001946596606785176 86-87 0.0 5.278906052298782E-4 3.299316282686739E-5 0.8195501646193859 0.0019795897696120433 88-89 0.0 5.278906052298782E-4 3.299316282686739E-5 0.8637115130631479 0.0020125829324389105 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 4075 0.0 36.005203 1 GTATCAA 6545 0.0 35.37274 1 TCAACGC 7815 0.0 28.803648 4 CAACGCA 7985 0.0 28.236364 5 ATCAACG 8230 0.0 27.408466 3 TATCAAC 8405 0.0 27.063799 2 AACGCAG 8620 0.0 26.4867 6 GTACATG 9005 0.0 24.810259 1 TACATGG 9250 0.0 23.667377 2 ACGCAGA 9835 0.0 22.97364 7 ACATGGG 9225 0.0 22.907864 3 GAGTACA 7185 0.0 21.414991 1 CGCAGAG 10610 0.0 21.20607 8 GTACCTG 2885 0.0 21.135195 1 AGTACAT 6625 0.0 20.572495 2 CATGGGG 6860 0.0 19.6604 4 TACCTGG 3030 0.0 19.43435 2 TACGCCG 150 7.761437E-4 18.986725 5 CCTATAC 505 0.0 18.807436 3 AGAGTAC 9465 0.0 18.630507 10-11 >>END_MODULE