##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921429_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4374495 Sequences flagged as poor quality 0 Sequence length 98 %GC 49 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.011996356150824 31.0 31.0 34.0 26.0 34.0 2 30.109926517232275 31.0 31.0 34.0 26.0 34.0 3 30.234864138603427 31.0 31.0 34.0 26.0 34.0 4 33.724988370086145 37.0 35.0 37.0 28.0 37.0 5 33.70042736361569 37.0 35.0 37.0 28.0 37.0 6 33.79180408252839 37.0 35.0 37.0 30.0 37.0 7 33.66670049914333 37.0 35.0 37.0 29.0 37.0 8 33.64068263879602 37.0 35.0 37.0 29.0 37.0 9 35.05093707959433 39.0 35.0 39.0 29.0 39.0 10-11 34.914222098779405 39.0 35.0 39.0 28.0 39.0 12-13 34.74069806914855 38.5 35.0 39.0 27.0 39.0 14-15 35.703878276235315 39.5 36.0 41.0 27.0 41.0 16-17 35.5483816989161 39.0 36.0 41.0 27.0 41.0 18-19 35.35824089409178 39.0 36.0 40.5 26.5 41.0 20-21 35.23415902864216 39.0 35.5 40.0 25.5 41.0 22-23 35.260975724055 39.0 35.5 41.0 25.5 41.0 24-25 35.11373301375359 39.0 35.0 41.0 25.0 41.0 26-27 34.824614841255965 39.0 35.0 40.0 24.0 41.0 28-29 34.57131954659909 39.0 34.0 40.0 22.5 41.0 30-31 34.28906559500011 38.0 34.0 40.0 20.0 41.0 32-33 33.98901233170915 38.0 34.0 40.0 18.0 41.0 34-35 33.548733282356025 38.0 33.0 40.0 14.5 41.0 36-37 33.15010052588927 38.0 33.0 40.0 9.0 41.0 38-39 32.897993139779565 38.0 32.0 40.0 9.0 41.0 40-41 32.60786250755801 38.0 31.5 40.0 8.5 41.0 42-43 32.286322992711156 37.5 31.0 40.0 7.5 41.0 44-45 31.943615891662922 37.0 30.5 40.0 4.0 41.0 46-47 31.619624093752535 37.0 30.0 40.0 2.0 41.0 48-49 31.375085238410378 37.0 30.0 40.0 2.0 41.0 50-51 30.65090404721002 36.0 29.0 38.5 2.0 39.5 52-53 31.185170745423186 36.5 30.5 39.0 2.0 40.0 54-55 31.597532286583938 37.0 31.0 39.5 2.0 40.5 56-57 31.434562846682873 36.5 31.0 40.0 2.0 41.0 58-59 31.09203542351746 36.0 30.0 39.0 2.0 41.0 60-61 30.62509661115169 35.5 29.5 39.0 2.0 40.0 62-63 30.119700445422843 35.0 29.0 39.0 2.0 40.0 64-65 29.561330736462153 35.0 28.0 38.0 2.0 40.0 66-67 29.060529501119557 34.0 27.5 37.5 2.0 40.0 68-69 28.532810072934133 34.0 26.0 37.0 2.0 39.0 70-71 27.997627611872915 34.0 26.0 36.0 2.0 39.0 72-73 27.428133075932195 33.5 25.5 36.0 2.0 39.0 74-75 26.81371015397206 33.0 24.0 35.0 2.0 38.0 76-77 26.210054760606653 32.5 22.0 35.0 2.0 37.0 78-79 25.625852927023576 32.0 20.0 35.0 2.0 36.5 80-81 25.02317776109014 31.5 18.0 34.5 2.0 36.0 82-83 24.367444356434284 31.0 10.5 34.0 2.0 35.5 84-85 23.720633467405953 31.0 4.5 34.0 2.0 35.0 86-87 23.067346745167157 30.0 2.0 34.0 2.0 35.0 88-89 22.387593882265268 30.0 2.0 34.0 2.0 35.0 90-91 21.622544659440692 29.0 2.0 34.0 2.0 35.0 92-93 20.778579813212726 29.0 2.0 34.0 2.0 35.0 94-95 19.855126591755162 27.0 2.0 33.0 2.0 34.5 96-97 18.95179569298856 25.5 2.0 33.0 2.0 34.0 98 18.326442709387027 25.0 2.0 32.0 2.0 34.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 171986.0 3 27973.0 4 21236.0 5 17754.0 6 17103.0 7 17741.0 8 20048.0 9 23528.0 10 25769.0 11 28243.0 12 31039.0 13 34815.0 14 30416.0 15 30997.0 16 34312.0 17 39946.0 18 43909.0 19 41766.0 20 43074.0 21 46812.0 22 50728.0 23 55564.0 24 61639.0 25 69192.0 26 77027.0 27 87239.0 28 99688.0 29 116151.0 30 136666.0 31 162097.0 32 200248.0 33 254326.0 34 335768.0 35 455942.0 36 595994.0 37 601413.0 38 254509.0 39 11837.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.72705625065887 17.230248121911913 13.751309419390639 24.291386208038578 2 15.88216391890393 18.624125040453123 39.36747900726041 26.126232033382546 3 20.321430866905875 22.642499881631792 27.428898448312893 29.60717080314944 4 13.82863460879999 14.90327357297099 34.803764712986265 36.46432710524275 5 15.699135080952772 35.51614583416731 32.42148282228363 16.363236262596295 6 34.84826927097606 33.08114646586876 16.84407586559326 15.226508397561913 7 31.26227522670577 30.073036169552957 19.241037655158408 19.423650948582864 8 28.02088618346999 33.46005552851204 18.720694968388806 19.798363319629168 9 26.934018417622646 16.81939239083641 19.019045199970826 37.227543991570116 10-11 26.698526469814922 25.031208203299155 25.851663865930476 22.41860146095545 12-13 26.901786403216725 22.018089797411417 26.618888263350872 24.461235536020986 14-15 23.901543007459026 23.53177542283608 24.338597180936564 28.22808438876833 16-17 24.322470571088076 26.600741331367118 24.76563468996402 24.311153407580786 18-19 24.282302368831612 25.91871220755564 26.306057243809626 23.49292817980312 20-21 24.86931828386351 25.022046730489027 26.308633178210222 23.800001807437237 22-23 24.564492480439533 24.731445086242257 26.232370979856878 24.471691453461332 24-25 24.360149676336075 24.999917075237924 26.31127210588291 24.32866114254309 26-27 24.375559257436535 25.12867925901064 26.272029680940417 24.22373180261241 28-29 24.36133874194334 25.29087256449818 26.14059053208015 24.20719816147833 30-31 24.523724485332185 25.171899032713053 26.029681581794755 24.274694900160007 32-33 24.370332935824187 25.241255275190284 25.993359348649058 24.395052440336467 34-35 24.560013586769426 25.19024919787569 26.133428042908484 24.1163091724464 36-37 24.623459455256892 25.143102543654184 25.988227005201033 24.245210995887895 38-39 24.545656858908895 25.224763350733824 25.961471701635475 24.268108088721807 40-41 24.697708533266113 25.159190459457744 25.929576074113896 24.213524933162248 42-43 24.570155604102236 25.092191388529695 25.89785409037198 24.439798916996093 44-45 24.563982378911316 25.207573547777933 25.839376575055418 24.389067498255333 46-47 24.716753772662482 25.216757850999176 25.77438710354116 24.292101272797183 48-49 24.707453914586537 25.288870233942674 25.559746026232254 24.443929825238534 50-51 24.463860133509925 25.544480790140522 25.580739681381313 24.41091939496824 52-53 24.653861796306963 25.52901701246087 25.469879930912064 24.3472412603201 54-55 24.55712094618804 25.258471840383418 25.680392785927737 24.50401442750081 56-57 24.513322938940025 25.44745105653991 25.64197251422144 24.397253490298628 58-59 24.693532633087024 25.32961962861498 25.65643927519579 24.32040846310221 60-61 24.67294308656526 25.26559821162588 25.67861631238828 24.382842389420578 62-63 24.492078235922968 25.446644832331238 25.70003695229936 24.361239979446434 64-65 24.540654060717166 25.294429835035626 25.683149159778306 24.481766944468898 66-67 24.50028503246749 25.380799123210473 25.648496282737494 24.470419561584546 68-69 24.463376058727455 25.37585075928489 25.647829461506067 24.51294372048159 70-71 24.50934276241673 25.21934906710183 25.6773631946494 24.59394497583204 72-73 24.62108986545207 25.26248977109411 25.576472833277474 24.53994753017635 74-75 24.436242828049988 25.46577783083956 25.562494403640446 24.53548493747001 76-77 24.559238983299544 25.27320305742184 25.514861268117766 24.652696691160852 78-79 24.596163405978878 25.19372974387882 25.632806104935174 24.57730074520713 80-81 24.57193698464223 25.34296530366824 25.50039463525657 24.584703076432955 82-83 24.70017807201789 25.24429211894678 25.486333650099734 24.56919615893559 84-85 24.65938956659724 25.299791820482586 25.433852726077262 24.606965886842907 86-87 24.6118411159489 25.303351542958687 25.554329846375655 24.53047749471676 88-89 24.53730771580174 25.17215041856676 25.503591356494322 24.78695050913719 90-91 24.627241005412337 25.152873119185642 25.506130136023064 24.713755739378957 92-93 24.667329275942095 25.263138077119823 25.56072678548633 24.50880586145175 94-95 24.716069920684532 25.062125760104152 25.535974962558072 24.68582935665324 96-97 24.665240136582277 25.10002988296966 25.534888510577918 24.699841469870147 98 24.66017643159826 25.17480494511739 25.37303392507385 24.7919846982105 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 581.0 1 446.0 2 566.5 3 788.0 4 592.5 5 470.0 6 718.0 7 1507.0 8 2228.5 9 2210.5 10 1859.5 11 1679.5 12 1815.5 13 2134.0 14 2534.0 15 2926.0 16 3211.5 17 3461.0 18 3677.5 19 3714.0 20 3653.5 21 3734.0 22 3941.0 23 4297.5 24 4943.0 25 6013.0 26 7507.0 27 9543.5 28 12192.0 29 15614.0 30 19930.5 31 25224.5 32 31498.0 33 38599.5 34 46858.0 35 55954.5 36 65338.0 37 75233.5 38 86007.5 39 96726.5 40 106971.0 41 117911.5 42 130114.0 43 143277.5 44 155117.0 45 166241.0 46 178999.5 47 191620.0 48 197690.5 49 197679.5 50 197503.0 51 197257.0 52 197285.0 53 198166.5 54 195875.0 55 188518.5 56 177035.5 57 165034.5 58 151835.0 59 134796.0 60 116373.0 61 97452.5 62 78964.5 63 60549.5 64 44505.0 65 33318.0 66 25526.0 67 19356.0 68 14622.0 69 11130.5 70 8374.5 71 6286.5 72 4818.0 73 3596.0 74 2659.5 75 2038.0 76 1431.0 77 898.5 78 558.5 79 347.5 80 211.5 81 128.0 82 78.0 83 47.0 84 31.5 85 24.5 86 17.5 87 14.0 88 11.5 89 10.5 90 8.5 91 6.5 92 5.5 93 5.5 94 8.0 95 7.0 96 4.0 97 3.5 98 3.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.4678482887739042 2 0.049148530287496044 3 0.0581552842099488 4 0.05536639086340252 5 0.06565329255148308 6 0.06558471320689588 7 0.04267921211476982 8 0.020253766434754183 9 0.012161403773464138 10-11 0.014744559086248813 12-13 0.011029844587775275 14-15 0.015236044389123774 16-17 0.013887317278908767 18-19 0.05541211042646066 20-21 0.08379252919479849 22-23 0.10041159036643087 24-25 0.07000808093277053 26-27 0.08558702204483032 28-29 0.08708433773498427 30-31 0.057709518470131976 32-33 0.03268948758656714 34-35 0.39581711717581114 36-37 0.619225762059392 38-39 0.5671283199546462 40-41 0.5622477565981902 42-43 0.533924487283675 44-45 0.5180940885747956 46-47 0.5081843732819445 48-49 0.49747456563557624 50-51 0.5134078333613366 52-53 0.597177502774606 54-55 0.5656995836090795 56-57 0.5209744210474581 58-59 0.4980803498460965 60-61 0.51172763941895 62-63 0.5243805284952892 64-65 0.5440170808287585 66-67 0.571277370302172 68-69 0.5227460541159609 70-71 0.4706829016835086 72-73 0.4526579639478385 74-75 0.4339929523293546 76-77 0.4476859614652663 78-79 0.441879576956883 80-81 0.4390792537195722 82-83 0.45895583375909677 84-85 0.42608346792029705 86-87 0.428392305854733 88-89 0.4542924383271669 90-91 0.43816486245840947 92-93 0.43403867189241274 94-95 0.44387980784067643 96-97 0.4382563015845257 98 0.4326442252191396 >>END_MODULE >>Sequence Length Distribution pass #Length Count 98 4374495.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.89891430302304 #Duplication Level Percentage of deduplicated Percentage of total 1 76.7619961970308 44.44436239540866 2 13.036760975236685 15.096286129884476 3 4.3014135757073895 7.47141528005226 4 1.9530147263529556 4.523097290946071 5 1.0216063105976647 2.957494811436086 6 0.640751096666369 2.225927570127248 7 0.428797134785244 1.7378821992218862 8 0.3101767379004188 1.4367117093190067 9 0.2314146794528636 1.2058792824692606 >10 1.2128304250696245 12.728797035506222 >50 0.07164919746567183 2.827183423161762 >100 0.02867665420816329 2.696625000310012 >500 5.949716126251496E-4 0.21626583278269926 >1k 2.776531743350559E-4 0.30029626803774623 >5k 3.9664739190649735E-5 0.1317757713367132 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5738 0.13116942641379176 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 6.857934458720378E-5 2 0.0 0.0 0.0 2.2859781529067928E-5 6.857934458720378E-5 3 0.0 0.0 0.0 2.2859781529067928E-5 6.857934458720378E-5 4 0.0 0.0 0.0 2.2859781529067928E-5 6.857934458720378E-5 5 0.0 0.0 0.0 2.2859781529067928E-5 6.857934458720378E-5 6 2.2859781529067928E-5 0.0 0.0 2.2859781529067928E-5 6.857934458720378E-5 7 2.2859781529067928E-5 0.0 0.0 2.2859781529067928E-5 6.857934458720378E-5 8 2.2859781529067928E-5 0.0 0.0 2.2859781529067928E-5 6.857934458720378E-5 9 2.2859781529067928E-5 0.0 0.0 2.2859781529067928E-5 6.857934458720378E-5 10-11 2.2859781529067928E-5 0.0 0.0 4.5719563058135856E-5 6.857934458720378E-5 12-13 2.2859781529067928E-5 4.5719563058135856E-5 0.0 4.5719563058135856E-5 1.600184707034755E-4 14-15 2.2859781529067928E-5 4.5719563058135856E-5 0.0 4.5719563058135856E-5 1.7144836146800946E-4 16-17 2.2859781529067928E-5 4.5719563058135856E-5 0.0 4.5719563058135856E-5 1.8287825223254342E-4 18-19 2.2859781529067928E-5 4.5719563058135856E-5 0.0 4.5719563058135856E-5 2.0573803376161133E-4 20-21 2.2859781529067928E-5 4.5719563058135856E-5 0.0 5.714945382266982E-5 2.514575968197472E-4 22-23 2.2859781529067928E-5 4.5719563058135856E-5 0.0 6.857934458720378E-5 2.9717715987788305E-4 24-25 2.2859781529067928E-5 4.5719563058135856E-5 0.0 1.3715868917440756E-4 2.9717715987788305E-4 26-27 2.2859781529067928E-5 4.5719563058135856E-5 0.0 1.8287825223254342E-4 3.20036941406951E-4 28-29 3.428967229360189E-5 6.857934458720378E-5 2.2859781529067928E-5 3.20036941406951E-4 3.20036941406951E-4 30-31 4.5719563058135856E-5 6.857934458720378E-5 2.2859781529067928E-5 0.0011429890764533962 3.20036941406951E-4 32-33 5.714945382266982E-5 6.857934458720378E-5 2.2859781529067928E-5 0.0026174449850782776 3.20036941406951E-4 34-35 6.857934458720378E-5 6.857934458720378E-5 2.2859781529067928E-5 0.004663395431929857 3.6575650446508685E-4 36-37 6.857934458720378E-5 1.1429890764533963E-4 2.2859781529067928E-5 0.00755515779535695 3.6575650446508685E-4 38-39 6.857934458720378E-5 1.3715868917440756E-4 2.2859781529067928E-5 0.01236714180722575 3.8861628599415473E-4 40-41 6.857934458720378E-5 1.3715868917440756E-4 2.2859781529067928E-5 0.01776205024808578 3.8861628599415473E-4 42-43 6.857934458720378E-5 1.3715868917440756E-4 2.2859781529067928E-5 0.023122669016652206 3.8861628599415473E-4 44-45 6.857934458720378E-5 1.3715868917440756E-4 2.2859781529067928E-5 0.02898620297885813 4.1147606752322267E-4 46-47 6.857934458720378E-5 1.3715868917440756E-4 2.2859781529067928E-5 0.034792587487241386 4.5719563058135854E-4 48-49 6.857934458720378E-5 1.3715868917440756E-4 4.5719563058135856E-5 0.04062183177715371 5.029151936394945E-4 50-51 6.857934458720378E-5 1.3715868917440756E-4 4.5719563058135856E-5 0.047411186891286886 5.257749751685623E-4 52-53 6.857934458720378E-5 1.3715868917440756E-4 4.5719563058135856E-5 0.05398337408089391 6.286439920493679E-4 54-55 6.857934458720378E-5 1.8287825223254342E-4 4.5719563058135856E-5 0.06096703733802416 6.629336643429698E-4 56-57 6.857934458720378E-5 1.8287825223254342E-4 4.5719563058135856E-5 0.0682478777550323 6.629336643429698E-4 58-59 6.857934458720378E-5 1.8287825223254342E-4 4.5719563058135856E-5 0.07607735292873806 6.629336643429698E-4 60-61 6.857934458720378E-5 1.8287825223254342E-4 4.5719563058135856E-5 0.08426115471614437 6.629336643429698E-4 62-63 6.857934458720378E-5 2.0573803376161136E-4 4.5719563058135856E-5 0.09367938470612036 6.857934458720378E-4 64-65 6.857934458720378E-5 2.2859781529067927E-4 4.5719563058135856E-5 0.10291473644386381 6.972233366365718E-4 66-67 8.000923535173774E-5 2.2859781529067927E-4 4.5719563058135856E-5 0.11181862134943577 7.315130089301737E-4 68-69 9.143912611627171E-5 2.514575968197472E-4 4.5719563058135856E-5 0.12147687904546697 7.315130089301737E-4 70-71 9.143912611627171E-5 2.8574726911334905E-4 4.5719563058135856E-5 0.13134087477525977 7.429428996947076E-4 72-73 9.143912611627171E-5 3.20036941406951E-4 4.5719563058135856E-5 0.14150204766493046 7.772325719883095E-4 74-75 9.143912611627171E-5 3.428967229360189E-4 4.5719563058135856E-5 0.151274604268607 8.000923535173774E-4 76-77 1.0286901688080568E-4 3.428967229360189E-4 4.5719563058135856E-5 0.16134433803216142 8.229521350464454E-4 78-79 1.1429890764533963E-4 3.428967229360189E-4 4.5719563058135856E-5 0.1716655293925356 8.572418073400473E-4 80-81 1.1429890764533963E-4 3.6575650446508685E-4 4.5719563058135856E-5 0.18284396256024982 8.915314796336491E-4 82-83 1.1429890764533963E-4 3.6575650446508685E-4 4.5719563058135856E-5 0.1943881522324291 0.0010286901688080568 84-85 1.1429890764533963E-4 3.6575650446508685E-4 4.5719563058135856E-5 0.2061266500476055 0.0010286901688080568 86 1.1429890764533963E-4 3.6575650446508685E-4 6.857934458720378E-5 0.21506482462547105 0.0010286901688080568 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 10620 0.0 34.63102 1 GTACCTG 5405 0.0 33.04297 1 TACCTGG 5680 0.0 31.156559 2 TCAACGC 13035 0.0 27.786034 4 TATCAAC 13160 0.0 27.696299 2 CAACGCA 13230 0.0 27.376488 5 ATCAACG 13480 0.0 26.868765 3 AACGCAG 13960 0.0 26.003155 6 GTACATG 14040 0.0 24.621578 1 ACCTGGG 7000 0.0 24.23339 3 GGTATCA 6760 0.0 24.172676 1 TACATGG 14545 0.0 23.136242 2 ACATGGG 14505 0.0 22.473068 3 ACGCAGA 16120 0.0 22.399496 7 CGCAGAG 16995 0.0 21.080128 8 CATGGGG 11245 0.0 19.937004 4 GTATAGG 1160 0.0 19.840612 1 AGAGTAC 14070 0.0 19.194635 10-11 GCAGAGT 18590 0.0 18.950891 9 GAGTACA 10755 0.0 18.831518 1 >>END_MODULE