##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921429_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4374495 Sequences flagged as poor quality 0 Sequence length 101 %GC 49 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.72510472637413 33.0 31.0 34.0 30.0 34.0 2 31.846508682716518 34.0 31.0 34.0 30.0 34.0 3 31.971272341150236 34.0 31.0 34.0 30.0 34.0 4 35.536683434316416 37.0 35.0 37.0 33.0 37.0 5 35.30925032489464 37.0 35.0 37.0 33.0 37.0 6 35.34122407272154 37.0 35.0 37.0 33.0 37.0 7 35.26555545268654 37.0 35.0 37.0 33.0 37.0 8 35.2149381814358 37.0 35.0 37.0 33.0 37.0 9 36.8000105154995 39.0 37.0 39.0 33.0 39.0 10-11 36.69363915149063 39.0 37.0 39.0 33.0 39.0 12-13 36.5624304062526 39.0 37.0 39.0 32.0 39.0 14-15 37.79753708713805 40.0 38.0 41.0 33.0 41.0 16-17 37.68201426678965 40.0 38.0 41.0 32.0 41.0 18-19 37.57101425421678 40.0 38.0 41.0 32.0 41.0 20-21 37.44545004623391 40.0 38.0 41.0 32.0 41.0 22-23 37.40595600177849 40.0 37.5 41.0 32.0 41.0 24-25 37.45386564620602 40.0 38.0 41.0 32.0 41.0 26-27 37.32508861022815 40.0 37.0 41.0 32.0 41.0 28-29 37.17280303212142 40.0 37.0 41.0 31.0 41.0 30-31 37.00987862598997 40.0 37.0 41.0 31.0 41.0 32-33 36.81995418899781 40.0 36.5 41.0 30.0 41.0 34-35 36.64706817586944 39.5 36.0 41.0 30.0 41.0 36-37 36.522109180602556 39.0 36.0 41.0 30.0 41.0 38-39 36.46657019838861 39.0 36.0 41.0 30.0 41.0 40-41 36.27770531227033 39.0 36.0 41.0 30.0 41.0 42-43 36.00654658423429 39.0 35.0 40.0 29.0 41.0 44-45 35.75873352238372 39.0 35.0 40.0 28.5 41.0 46-47 35.43582264924294 38.5 35.0 40.0 27.0 41.0 48-49 35.046551659105795 38.0 34.5 40.0 26.0 41.0 50-51 34.72927515061738 38.0 34.0 40.0 25.5 41.0 52-53 34.38098214765361 38.0 34.0 40.0 24.0 41.0 54-55 34.019762738327515 38.0 33.0 40.0 23.5 41.0 56-57 33.597863524818294 37.0 33.0 40.0 22.5 41.0 58-59 33.1691803282436 36.5 32.0 39.0 21.5 41.0 60-61 32.695382552728944 36.0 31.5 39.0 19.5 40.0 62-63 32.22067930126792 35.5 31.0 39.0 18.0 40.0 64-65 31.66166048881071 35.0 31.0 38.0 14.0 40.0 66-67 31.092010277757776 35.0 30.0 38.0 9.5 40.0 68-69 30.551088868543683 34.0 29.0 37.0 7.5 39.0 70-71 29.95523586151087 34.0 29.0 36.5 7.0 39.0 72-73 29.364927037292304 34.0 28.0 36.0 2.0 39.0 74-75 28.806073158158824 33.5 27.5 35.0 2.0 37.5 76-77 27.647804489432495 31.5 26.5 34.0 2.0 36.0 78-79 28.56907071559117 33.0 28.0 35.0 2.0 36.5 80-81 28.56902373874013 34.0 28.5 35.0 2.0 36.0 82-83 28.181537068850233 33.0 27.5 35.0 2.0 36.0 84-85 27.627336984040443 33.0 26.5 35.0 2.0 35.5 86-87 27.03717514821711 33.0 25.5 35.0 2.0 35.0 88-89 26.433196288943066 32.0 25.0 34.0 2.0 35.0 90-91 25.872108437659662 32.0 23.5 34.0 2.0 35.0 92-93 25.341185325391848 31.5 21.0 34.0 2.0 35.0 94-95 24.74380859962121 31.0 18.5 34.0 2.0 35.0 96-97 23.84989924551291 31.0 6.5 34.0 2.0 35.0 98-99 22.70441742418268 31.0 2.0 34.0 2.0 35.0 100-101 19.199852440110227 24.5 2.0 31.5 2.0 34.5 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 36611.0 3 18294.0 4 11022.0 5 8274.0 6 7290.0 7 7425.0 8 8807.0 9 10569.0 10 12418.0 11 14799.0 12 17579.0 13 21079.0 14 23410.0 15 26544.0 16 30509.0 17 36356.0 18 36792.0 19 32719.0 20 32395.0 21 33982.0 22 36600.0 23 39537.0 24 44396.0 25 51032.0 26 60674.0 27 72626.0 28 87671.0 29 105206.0 30 127467.0 31 158078.0 32 198822.0 33 260907.0 34 359340.0 35 515179.0 36 736527.0 37 794143.0 38 291769.0 39 7647.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.965738243445216 17.81303614251181 14.165467022119168 24.055758591923805 2 16.0910687976555 19.04837015472643 38.835522728909275 26.025038318708788 3 20.342866731470362 22.906788751224212 27.70076877424995 29.049575743055474 4 14.150500171321315 15.313540879919083 34.74204133578475 35.79391761297486 5 15.734878235618325 35.55068233362053 32.4629732541497 16.251466176611444 6 34.86659895969147 33.305541449935724 16.651203857467667 15.176655732905134 7 31.341969376559607 30.114826463205844 19.155915459319576 19.38728870091497 8 28.08069260019584 33.59933839317322 18.63087295624887 19.689096050382073 9 26.84073483414979 16.80888500426724 19.0585766878465 37.29180347373647 10-11 26.70060102274432 25.14737830956933 25.857260845106644 22.294759822579707 12-13 26.89380223490544 22.082999692358136 26.678281319663466 24.344916753072958 14-15 23.877888256839267 23.603118992567595 24.38398798810889 28.13500476248425 16-17 24.280518082320654 26.691006324530246 24.861907448319485 24.16656814482962 18-19 24.216471638571026 25.966687717100466 26.45229984279065 23.36454080153786 20-21 24.80605309837714 25.031272169341328 26.475228360293347 23.687446371988187 22-23 24.44859238578843 24.73665120869903 26.441163139264866 24.373593266247674 24-25 24.287799126653532 25.0150809592542 26.48322777805219 24.213892136040087 26-27 24.306350259936448 25.130939971451234 26.469217702978966 24.093492065633352 28-29 24.250563289399732 25.315874220117994 26.38456923166274 24.048993258819532 30-31 24.427959417877897 25.15050270440798 26.242758907629494 24.17877897008463 32-33 24.234980894454335 25.206095165723706 26.24838729625524 24.310536643566724 34-35 24.44014237817365 25.202820540928695 26.332063403301987 24.02497367759567 36-37 24.463264539531306 25.16230607804455 26.219853319247033 24.154576063177114 38-39 24.430857583015406 25.22227200150717 26.206404273310905 24.140466142166513 40-41 24.554409716128937 25.174706374280404 26.14574765022256 24.125136259368098 42-43 24.447112029703316 25.16034182633601 26.101903915951404 24.290642228009272 44-45 24.41903200255242 25.181740582829615 26.082815839600737 24.316411575017224 46-47 24.560596602666557 25.260493479945943 26.020537655798766 24.15837226158873 48-49 24.577329839490897 25.35016245224304 25.754918573849334 24.31758913441673 50-51 24.380495694890165 25.57419848942512 25.738458504913797 24.30684731077092 52-53 24.56886062525368 25.546350290333336 25.615068780785155 24.269720303627825 54-55 24.55720073250552 25.305548783045705 25.76567938904074 24.371571095408033 56-57 24.51574770118608 25.514485562445007 25.70923578767996 24.260530948688952 58-59 24.68632542054545 25.397388190208662 25.657410163316978 24.25887622592891 60-61 24.669637765455416 25.354600667108418 25.741969797575653 24.233791769860513 62-63 24.45914966069605 25.48409200497416 25.77259353236208 24.284164801967716 64-65 24.520841511058418 25.351728861576078 25.728702460507446 24.398727166858055 66-67 24.502009342706074 25.456895922839777 25.65618365984628 24.384911074607867 68-69 24.498629303512345 25.440927384537265 25.6731166218536 24.38732669009679 70-71 24.508044731654994 25.305310452258308 25.71624340884594 24.470401407240754 72-73 24.646597738609696 25.326658986312108 25.582429428167263 24.44431384691093 74-75 24.48915552952324 25.5478440794965 25.48937429092659 24.473626100053668 76-77 24.538713808532826 25.341034400415364 25.649255922339094 24.47099586871272 78-79 24.491638844569632 25.31983353980915 25.741520031852673 24.44700758376854 80-81 24.50187493990211 25.476818535064638 25.61772629707687 24.40358022795638 82-83 24.604222729420595 25.366388449444425 25.583251767588106 24.446137053546877 84-85 24.584801924152636 25.469391749323307 25.52050448302459 24.425301843499465 86-87 24.51142728390623 25.472220397669158 25.611346700962667 24.405005617461942 88-89 24.46672324068476 25.370195603173933 25.554084140868845 24.608997015272458 90-91 24.535976897729054 25.367015904785532 25.553900110512213 24.5431070869732 92-93 24.634370583149988 25.505928013063585 25.621183498534005 24.238517905252422 94-95 24.603902370104464 25.34087498008167 25.555752928995172 24.4994697208187 96-97 24.536073848230348 25.311287317985894 25.652022780318617 24.500616053465144 98-99 24.52995164713969 25.386640554742733 25.54092754867036 24.542480249447216 100-101 25.088246281196547 24.72260718836832 25.72143621051265 24.46771031992249 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 288.0 1 238.0 2 401.5 3 588.0 4 416.0 5 320.5 6 546.0 7 1195.0 8 1817.5 9 1803.5 10 1371.0 11 1018.0 12 995.5 13 1155.5 14 1305.0 15 1432.0 16 1626.5 17 1874.0 18 2127.5 19 2312.0 20 2509.0 21 2890.0 22 3345.0 23 3812.0 24 4449.0 25 5470.5 26 6862.0 27 8584.0 28 10868.0 29 13960.0 30 18057.5 31 22576.0 32 28059.0 33 34489.5 34 41372.0 35 49252.5 36 58244.5 37 68029.5 38 77359.5 39 87750.5 40 99154.5 41 108622.0 42 118921.0 43 131773.0 44 144727.0 45 156921.5 46 167389.0 47 178472.5 48 191911.0 49 197663.0 50 194854.0 51 193522.0 52 194076.0 53 194073.5 54 192856.0 55 186732.5 56 174955.5 57 161578.5 58 148981.5 59 134248.0 60 115421.5 61 97138.0 62 79391.5 63 60570.5 64 44583.0 65 33282.0 66 25085.0 67 19250.0 68 14763.5 69 11072.0 70 8451.5 71 6439.5 72 4780.5 73 3699.5 74 2773.0 75 2068.0 76 1480.0 77 911.5 78 537.0 79 308.0 80 202.5 81 105.5 82 51.5 83 29.5 84 14.5 85 11.0 86 7.0 87 1.5 88 1.5 89 1.5 90 0.5 91 0.5 92 1.5 93 1.0 94 0.0 95 0.5 96 0.5 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.3081727147933647 2 0.0 3 0.005920683416028593 4 0.059275413504873135 5 5.029151936394944E-4 6 0.06206430685141943 7 0.07321988023760456 8 0.10350909076361958 9 0.09109622939333568 10-11 0.09588535362367542 12-13 0.09494810258098363 14-15 0.06462460238267503 16-17 0.034792587487241386 18-19 0.0380272465736045 20-21 0.02737458838105884 22-23 0.04062183177715371 24-25 0.0327123473680962 26-27 0.0211681576959169 28-29 0.02461998470680616 30-31 0.0035432661370055287 32-33 0.005520637239269904 34-35 0.008446689274990598 36-37 0.01156704945370837 38-39 0.016996247566862004 40-41 0.021545344091146522 42-43 0.003851873187647946 44-45 0.013933036841966902 46-47 0.02434566732845734 48-49 0.0030289210526015004 50-51 0.0076008773584150865 52-53 0.0028917623634270927 54-55 0.004423367725874644 56-57 0.0039776019860578195 58-59 0.0013030075471568718 60-61 0.0055663568023280405 62-63 0.015727529691998733 64-65 0.007223690963185465 66-67 0.038221554716601575 68-69 0.06012122542144864 70-71 0.012470010824106554 72-73 0.03275806693115434 74-75 0.04918281995978964 76-77 0.29766864518075803 78-79 0.0713110884799274 80-81 0.032495179443570055 82-83 0.028197540516105287 84-85 0.018962188778361845 86-87 0.11621912929378135 88-89 0.5183226863900862 90-91 0.13137516444755337 92-93 0.04651965541165323 94-95 0.008778156107162084 96-97 0.006412168718903554 98-99 0.0115098999998857 100-101 0.008526698510342335 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4374495.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.412851523844274 #Duplication Level Percentage of deduplicated Percentage of total 1 72.8396192682973 38.9057176903091 2 15.064139343133077 16.092372761385363 3 5.109498111926909 8.187385920411439 4 2.2657098787633916 4.84072101401985 5 1.2278224927222854 3.2790750250705902 6 0.7622320374720015 2.4427791986525595 7 0.5024828404970081 1.8787328946922355 8 0.36973299614576827 1.5798794901280007 9 0.2742257163443771 1.3182459724009845 >10 1.4502796895711465 13.982937691386995 >50 0.09577832490150662 3.482342674729767 >100 0.0371925155089989 3.2214442054751866 >500 9.865350869342924E-4 0.3429210852400458 >1k 2.5735682517308723E-4 0.30406510104257034 >5k 4.28928041955086E-5 0.14137927505527217 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6171 0.14106771181587818 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 2.2859781529067928E-5 0.0 5 0.0 0.0 0.0 4.5719563058135856E-5 0.0 6 4.5719563058135856E-5 0.0 0.0 4.5719563058135856E-5 0.0 7 4.5719563058135856E-5 0.0 0.0 4.5719563058135856E-5 0.0 8 6.857934458720378E-5 0.0 0.0 4.5719563058135856E-5 0.0 9 6.857934458720378E-5 0.0 0.0 4.5719563058135856E-5 0.0 10-11 6.857934458720378E-5 0.0 0.0 9.143912611627171E-5 2.2859781529067928E-5 12-13 6.857934458720378E-5 0.0 0.0 9.143912611627171E-5 1.0286901688080568E-4 14-15 6.857934458720378E-5 0.0 0.0 9.143912611627171E-5 1.1429890764533963E-4 16-17 1.1429890764533963E-4 0.0 0.0 1.2572879840987361E-4 1.3715868917440756E-4 18-19 1.1429890764533963E-4 2.2859781529067928E-5 0.0 1.600184707034755E-4 1.3715868917440756E-4 20-21 1.1429890764533963E-4 2.2859781529067928E-5 0.0 1.7144836146800946E-4 1.4858857993894152E-4 22-23 1.1429890764533963E-4 2.2859781529067928E-5 0.0 1.9430814299707737E-4 2.171679245261453E-4 24-25 1.1429890764533963E-4 2.2859781529067928E-5 0.0 2.743173783488151E-4 2.514575968197472E-4 26-27 1.1429890764533963E-4 2.2859781529067928E-5 0.0 2.9717715987788305E-4 2.9717715987788305E-4 28-29 1.1429890764533963E-4 2.2859781529067928E-5 0.0 3.8861628599415473E-4 2.9717715987788305E-4 30-31 1.1429890764533963E-4 2.2859781529067928E-5 0.0 0.0011772787487469981 2.9717715987788305E-4 32-33 1.1429890764533963E-4 2.2859781529067928E-5 0.0 0.0026174449850782776 2.9717715987788305E-4 34-35 1.1429890764533963E-4 2.2859781529067928E-5 0.0 0.004697685104223459 2.9717715987788305E-4 36-37 1.1429890764533963E-4 3.428967229360189E-5 0.0 0.007360849652359873 2.9717715987788305E-4 38-39 1.1429890764533963E-4 6.857934458720378E-5 0.0 0.012127114101170535 3.428967229360189E-4 40-41 1.257287984098736E-4 8.000923535173774E-5 0.0 0.017281994835975353 3.428967229360189E-4 42-43 1.3715868917440756E-4 1.1429890764533963E-4 0.0 0.022505454915367373 3.428967229360189E-4 44-45 1.3715868917440756E-4 1.1429890764533963E-4 0.0 0.028163250843811685 3.6575650446508685E-4 46-47 1.3715868917440756E-4 1.1429890764533963E-4 0.0 0.033706747864610656 4.0004617675868867E-4 48-49 1.3715868917440756E-4 1.1429890764533963E-4 0.0 0.039170235650057894 4.343358490522906E-4 50-51 1.3715868917440756E-4 1.1429890764533963E-4 0.0 0.04554811469666784 4.343358490522906E-4 52-53 1.3715868917440756E-4 1.1429890764533963E-4 0.0 0.05178883505410339 4.343358490522906E-4 54-55 1.3715868917440756E-4 1.1429890764533963E-4 0.0 0.05838388202523949 4.343358490522906E-4 56-57 1.3715868917440756E-4 1.1429890764533963E-4 0.0 0.0651846670301372 4.5719563058135854E-4 58-59 1.3715868917440756E-4 1.1429890764533963E-4 0.0 0.0724883672286744 4.8005541211042647E-4 60-61 1.3715868917440756E-4 1.257287984098736E-4 0.0 0.0798263570995052 5.029151936394944E-4 62-63 1.600184707034755E-4 1.3715868917440756E-4 0.0 0.0883759153913766 5.257749751685623E-4 64-65 1.600184707034755E-4 1.3715868917440756E-4 0.0 0.09708549215395149 5.486347566976302E-4 66-67 1.600184707034755E-4 1.3715868917440756E-4 0.0 0.10531501350441594 5.486347566976302E-4 68-69 1.600184707034755E-4 1.3715868917440756E-4 0.0 0.11387600168705186 5.486347566976302E-4 70-71 1.8287825223254342E-4 1.4858857993894152E-4 0.0 0.1231342132063244 5.943543197557661E-4 72-73 1.8287825223254342E-4 1.600184707034755E-4 0.0 0.13254101330553586 7.086532274011057E-4 74-75 1.8287825223254342E-4 1.600184707034755E-4 0.0 0.14149061777416594 7.543727904592416E-4 76-77 1.8287825223254342E-4 1.600184707034755E-4 0.0 0.15071453962114484 7.658026812237755E-4 78-79 1.8287825223254342E-4 1.7144836146800946E-4 0.0 0.1600184707034755 7.772325719883095E-4 80-81 1.8287825223254342E-4 1.8287825223254342E-4 0.0 0.1701567838116171 8.000923535173773E-4 82-83 1.8287825223254342E-4 1.9430814299707737E-4 0.0 0.1808894512395145 8.229521350464453E-4 84-85 1.8287825223254342E-4 2.0573803376161133E-4 0.0 0.19190786593652526 8.229521350464453E-4 86-87 1.8287825223254342E-4 2.514575968197472E-4 0.0 0.20320059801188478 8.572418073400473E-4 88-89 1.8287825223254342E-4 2.6288748758428117E-4 0.0 0.2154191512391716 8.686716981045812E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTACCTG 5370 0.0 35.211956 1 GTATCAA 11395 0.0 33.940296 1 TACCTGG 5620 0.0 33.04642 2 TCAACGC 13895 0.0 27.416983 4 TATCAAC 14210 0.0 27.10883 2 CAACGCA 14255 0.0 26.64513 5 ATCAACG 14320 0.0 26.636454 3 GGTATCA 7495 0.0 25.991156 1 AACGCAG 15110 0.0 25.327684 6 ACCTGGG 7340 0.0 24.786007 3 GTACATG 13640 0.0 24.128904 1 TACATGG 13940 0.0 22.693184 2 ACGCAGA 17455 0.0 21.844667 7 ACATGGG 14180 0.0 20.903175 3 CGCAGAG 18285 0.0 20.827116 8 TATCACG 515 0.0 20.290813 2 AGAGTAC 14840 0.0 20.045164 10-11 GCAGAGT 19995 0.0 18.760117 9 GAGTACA 10710 0.0 18.633673 1 CATGGGG 11285 0.0 18.478504 4 >>END_MODULE