##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921428_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2739032 Sequences flagged as poor quality 0 Sequence length 98 %GC 49 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.951041462823362 31.0 31.0 34.0 28.0 34.0 2 31.07026862044693 33.0 31.0 34.0 28.0 34.0 3 31.201217437401244 33.0 31.0 34.0 28.0 34.0 4 34.72305617459015 37.0 35.0 37.0 32.0 37.0 5 34.733984853042976 37.0 35.0 37.0 32.0 37.0 6 34.83525384150313 37.0 35.0 37.0 32.0 37.0 7 34.744974867033314 37.0 35.0 37.0 32.0 37.0 8 34.73936157007293 37.0 35.0 37.0 32.0 37.0 9 36.27609535047418 39.0 37.0 39.0 32.0 39.0 10-11 36.179504657119736 39.0 37.0 39.0 32.0 39.0 12-13 36.05027323521594 39.0 37.0 39.0 32.0 39.0 14-15 37.178189959080434 40.0 38.0 41.0 32.0 41.0 16-17 37.069794000216135 40.0 37.5 41.0 31.5 41.0 18-19 36.92339921548927 40.0 37.0 41.0 31.0 41.0 20-21 36.8268808104469 40.0 37.0 41.0 31.0 41.0 22-23 36.86936132911189 40.0 37.0 41.0 31.0 41.0 24-25 36.76706277984339 40.0 37.0 41.0 31.0 41.0 26-27 36.54056834677361 40.0 37.0 41.0 30.0 41.0 28-29 36.347021685033255 40.0 36.5 41.0 30.0 41.0 30-31 36.12780975176632 39.0 36.0 41.0 29.5 41.0 32-33 35.88275146110013 39.0 36.0 40.0 28.5 41.0 34-35 35.49262257615099 39.0 35.0 40.0 27.0 41.0 36-37 35.142725422704075 38.5 35.0 40.0 25.5 41.0 38-39 34.94270183772953 38.0 35.0 40.0 25.0 41.0 40-41 34.71567163143767 38.0 34.5 40.0 24.0 41.0 42-43 34.45080579562415 38.0 34.0 40.0 24.0 41.0 44-45 34.159628839677666 38.0 33.5 40.0 23.0 41.0 46-47 33.88786293843957 38.0 33.0 40.0 21.5 41.0 48-49 33.70060353438733 38.0 33.0 40.0 20.0 41.0 50-51 32.89005440608214 37.0 32.0 39.0 19.5 40.5 52-53 33.33520199837022 37.5 33.0 39.0 21.5 40.0 54-55 33.78981260532918 38.0 34.0 40.0 21.0 41.0 56-57 33.660067133206184 38.0 33.5 40.0 20.0 41.0 58-59 33.356720366903346 37.0 33.0 40.0 18.5 41.0 60-61 32.933806724419426 36.5 33.0 39.5 17.0 41.0 62-63 32.47938267972043 36.0 32.0 39.0 12.5 40.5 64-65 31.97345449049153 35.5 31.5 39.0 8.0 40.0 66-67 31.51791946935998 35.0 31.0 38.0 7.0 40.0 68-69 31.026727508112355 35.0 31.0 37.5 2.0 40.0 70-71 30.536471643996858 35.0 30.0 37.0 2.0 39.0 72-73 30.01505988246943 34.0 29.5 36.0 2.0 39.0 74-75 29.459387111943197 34.0 29.0 36.0 2.0 38.5 76-77 28.92039870289942 34.0 29.0 35.0 2.0 37.0 78-79 28.400822078748988 34.0 28.0 35.0 2.0 37.0 80-81 27.868173318164956 33.0 27.0 35.0 2.0 36.0 82-83 27.293784081383496 33.0 26.0 35.0 2.0 36.0 84-85 26.732726926885118 32.0 25.0 34.5 2.0 35.0 86-87 26.171673970950323 32.0 24.5 34.0 2.0 35.0 88-89 25.577065547244427 32.0 22.5 34.0 2.0 35.0 90-91 24.889077418591675 31.0 19.5 34.0 2.0 35.0 92-93 24.128377288034606 31.0 14.5 34.0 2.0 35.0 94-95 23.27645898258947 30.5 2.0 34.0 2.0 35.0 96-97 22.40964636411696 30.0 2.0 34.0 2.0 35.0 98 21.798723052523666 29.0 2.0 34.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 59624.0 3 10422.0 4 8169.0 5 7018.0 6 6524.0 7 6776.0 8 7667.0 9 8822.0 10 9993.0 11 11273.0 12 12928.0 13 16603.0 14 13248.0 15 12532.0 16 14271.0 17 16902.0 18 19266.0 19 17967.0 20 17995.0 21 19474.0 22 21338.0 23 23812.0 24 26879.0 25 30769.0 26 35341.0 27 41149.0 28 48459.0 29 58172.0 30 70805.0 31 87271.0 32 112280.0 33 149324.0 34 210774.0 35 314410.0 36 452192.0 37 511423.0 38 236444.0 39 10716.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.34934083104534 17.517535149194636 13.531329882448265 24.601794137311757 2 16.25890008778169 19.16037162740966 38.17911628717434 26.401611997634316 3 19.89645872925759 22.18257195318248 28.432092460140883 29.488876857419044 4 14.0930709512295 15.082757620470453 34.58883854382243 36.235332884477614 5 15.415063663433259 35.716738824646974 33.02745656820299 15.840740943716774 6 34.93091426704966 33.37463107875167 16.388579754581052 15.305874899617617 7 30.568308793420922 30.72249218216068 19.605581285256072 19.103617739162328 8 27.629950020486998 33.4018789609111 19.203110518047183 19.765060500554718 9 26.75586065873074 16.153436062221573 19.378003359380706 37.71269991966698 10-11 26.472118698470915 24.94033234228056 26.3025004181118 22.285048541136725 12-13 26.609761365435112 22.17210819882179 26.71291462360837 24.505215812134733 14-15 23.80731456645248 23.872021652773086 24.434191852494138 27.886471928280304 16-17 24.058608612364367 26.79935783288866 25.14939076102426 23.992642793722712 18-19 24.06942850765532 26.1750756289689 26.544772605307926 23.21072325806785 20-21 24.609835492874574 25.271912906014826 26.490167503612227 23.628084097498373 22-23 24.474885894815635 24.9470225929727 26.320085874933113 24.25800563727855 24-25 24.332368987575798 25.127954237543275 26.376074384453158 24.163602390427766 26-27 24.208720310909797 25.28369422817958 26.50739909043901 24.000186370471607 28-29 24.16234244272318 25.530952697232213 26.358017055461584 23.94868780458302 30-31 24.40098193424387 25.350456598692737 26.126253333408833 24.122308133654556 32-33 24.268054366764737 25.430489384521575 26.041710989516098 24.259745259197587 34-35 24.475048835331204 25.30384238494249 26.20342081068025 24.017687969046055 36-37 24.48273314499571 25.217613757908968 26.191922800687777 24.107730296407546 38-39 24.44593427988906 25.36783424866374 26.14367319949305 24.042558271954153 40-41 24.548723996563947 25.392438072319873 26.036744182373155 24.022093748743025 42-43 24.507010598939317 25.277083041458393 25.886912697886622 24.32899366171567 44-45 24.463781930243687 25.314545223225082 25.85814810415512 24.36352474237611 46-47 24.59388254782598 25.349670182734958 25.888021100081097 24.16842616935796 48-49 24.509158081319143 25.49703669454836 25.723480990481335 24.27032423365116 50-51 24.35169632317981 25.66660608697408 25.768361613035278 24.21333597681083 52-53 24.563572168347463 25.622445348110624 25.586985443249727 24.22699704029219 54-55 24.48663072530721 25.379654486865828 25.71427206991961 24.41944271790735 56-57 24.520473904483264 25.464710154665937 25.7147819394599 24.300034001390898 58-59 24.60611754029682 25.435677061536634 25.668052845116584 24.29015255304996 60-61 24.567571363139454 25.400752480809352 25.855655492660144 24.176020663391046 62-63 24.39865628161905 25.4974179669549 25.766132267435722 24.337793483990332 64-65 24.50141864197098 25.43872680486865 25.672782989738145 24.38707156342223 66-67 24.477421021009327 25.469632733986124 25.620894599593218 24.432051645411327 68-69 24.41958027064957 25.46244107493132 25.66514918626674 24.452829468152373 70-71 24.512689487216562 25.331559048668296 25.717084291488646 24.438667172626495 72-73 24.589552190886554 25.357711395596855 25.62217318054787 24.430563232968723 74-75 24.38991373692155 25.634711107923586 25.55924994465142 24.416125210503445 76-77 24.557254249874884 25.4248590713163 25.50755973600363 24.51032694280519 78-79 24.497519585670005 25.37461199671932 25.603382821771 24.524485595839675 80-81 24.515322856392338 25.456574600877858 25.54502790443081 24.483074638298994 82-83 24.63440996539823 25.38818512525643 25.540415305655706 24.436989603689632 84-85 24.61730784785081 25.45366143351896 25.481630978444375 24.447399740185855 86-87 24.548172910421794 25.43474205821163 25.600860285895028 24.41622474547155 88-89 24.51209061249037 25.260418625566476 25.564534668146393 24.662956093796755 90-91 24.561112267761644 25.251317740868906 25.549727463581558 24.637842527787893 92-93 24.64183023703366 25.438013721495174 25.525102881866157 24.39505315960501 94-95 24.7005026583972 25.266247885563903 25.545781795147764 24.487467660891138 96-97 24.60946843683184 25.232392878054366 25.583559446644838 24.574579238468957 98 24.646642882691197 25.351908067903555 25.39772737694544 24.60372167245981 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 992.0 1 757.5 2 846.5 3 1142.0 4 924.0 5 843.5 6 1345.0 7 2763.0 8 4046.0 9 3867.5 10 2786.5 11 1990.5 12 1892.5 13 2009.5 14 2224.5 15 2493.5 16 2679.5 17 2705.0 18 2655.0 19 2666.5 20 2615.5 21 2464.5 22 2407.0 23 2472.0 24 2630.0 25 3020.0 26 3684.5 27 4695.5 28 6129.5 29 8303.5 30 11210.5 31 14767.5 32 19111.0 33 23426.5 34 28238.5 35 33914.0 36 39889.5 37 46303.0 38 53393.0 39 60342.5 40 67261.5 41 75020.0 42 82814.0 43 90634.0 44 97925.0 45 105331.0 46 114865.5 47 124066.0 48 127288.5 49 125072.0 50 123423.0 51 122824.0 52 122125.0 53 122394.0 54 121204.5 55 116338.5 56 108333.0 57 100432.0 58 92168.5 59 82136.0 60 71782.0 61 60595.5 62 49137.0 63 37475.5 64 27443.5 65 20749.5 66 16032.5 67 12274.0 68 9186.0 69 6919.0 70 5176.5 71 3932.0 72 3041.0 73 2151.5 74 1581.5 75 1203.5 76 797.0 77 475.0 78 276.0 79 150.0 80 83.5 81 47.0 82 34.5 83 22.0 84 12.0 85 11.5 86 8.0 87 7.5 88 7.0 89 6.0 90 6.0 91 5.0 92 5.0 93 3.5 94 2.0 95 2.5 96 2.5 97 1.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.5087198689171941 2 0.056917918447101014 3 0.06447533289132802 4 0.0621022317373437 5 0.07236133057226056 6 0.07294547854862594 7 0.050492290707081916 8 0.02592156645121342 9 0.015771995361865066 10-11 0.019349901717102977 12-13 0.014183843051121709 14-15 0.019623721081024247 16-17 0.017980804897496632 18-19 0.06042280630529326 20-21 0.0910540658159525 22-23 0.10806737562759397 24-25 0.07725356987432057 26-27 0.0929890559876628 28-29 0.09516135627477151 30-31 0.06504122624343199 32-33 0.0391561690407414 34-35 0.42914796176167347 36-37 0.6712590433408592 38-39 0.6163491335625141 40-41 0.6105624176716445 42-43 0.5832900090250862 44-45 0.5672259396750385 46-47 0.5568025492217689 48-49 0.5462696310229307 50-51 0.5603074370799611 52-53 0.6443334725552677 54-55 0.6140855601540982 56-57 0.5700554064355583 58-59 0.5474926908484458 60-61 0.5613114414143391 62-63 0.5729578916931236 64-65 0.5907744049722676 66-67 0.6181563413643943 68-69 0.5716618133705631 70-71 0.5176281255567661 72-73 0.49964732065926937 74-75 0.4792386507350042 76-77 0.4943352249991968 78-79 0.4884389813627588 80-81 0.48557300535371617 82-83 0.5068396426182681 84-85 0.4692351166397472 86-87 0.47321462472873627 88-89 0.5022394773043908 90-91 0.483729288303313 92-93 0.4779060631639207 94-95 0.49008189754628645 96-97 0.48411263541280275 98 0.4785267203888089 >>END_MODULE >>Sequence Length Distribution pass #Length Count 98 2739032.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.39098638997747 #Duplication Level Percentage of deduplicated Percentage of total 1 74.95659040475803 44.51745840568101 2 14.557996561330224 17.292275512786045 3 4.683756556276304 8.345187656633213 4 2.040072922249771 4.846477726395909 5 1.0526058509005471 3.1257649882422522 6 0.6188980908527145 2.2054180854369965 7 0.4178600833889357 1.7371985767826992 8 0.29921144337737754 1.4216370209081075 9 0.22308355141006292 1.1924236949060598 >10 1.0915881593532752 11.339826219518532 >50 0.04555867379584507 1.8036617372482415 >100 0.01148161411866643 1.098452582685185 >500 9.25777277310892E-4 0.39686603572433016 >1k 3.0859242573793086E-4 0.4661810512571642 >5k 6.171848514758617E-5 0.21117070579434838 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5761 0.21032978074005704 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3748 0.13683666346358858 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3597 0.13132376693664038 No Hit GAGTAAGCAGTGGTATCAACGCAGAGTAAGCAGTGGTATCAACGCAGAGT 2976 0.10865152360395935 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.650924852283581E-5 2 0.0 0.0 0.0 0.0 3.650924852283581E-5 3 0.0 0.0 0.0 0.0 3.650924852283581E-5 4 0.0 0.0 0.0 0.0 3.650924852283581E-5 5 0.0 0.0 0.0 0.0 3.650924852283581E-5 6 0.0 0.0 0.0 0.0 7.301849704567161E-5 7 0.0 0.0 0.0 0.0 7.301849704567161E-5 8 0.0 0.0 0.0 0.0 7.301849704567161E-5 9 0.0 0.0 0.0 0.0 1.0952774556850741E-4 10-11 3.650924852283581E-5 0.0 0.0 0.0 1.0952774556850741E-4 12-13 3.650924852283581E-5 0.0 0.0 1.6429161835276114E-4 2.5556473965985063E-4 14-15 5.4763872784253714E-5 3.650924852283581E-5 0.0 1.8254624261417903E-4 3.1032861244410434E-4 16-17 1.2778236982992531E-4 7.301849704567161E-5 0.0 2.0080086687559692E-4 3.2858323670552223E-4 18-19 1.4603699409134323E-4 7.301849704567161E-5 0.0 2.1905549113701483E-4 3.2858323670552223E-4 20-21 1.4603699409134323E-4 7.301849704567161E-5 0.0 3.1032861244410434E-4 3.468378609669401E-4 22-23 1.4603699409134323E-4 7.301849704567161E-5 0.0 3.2858323670552223E-4 4.0160173375119383E-4 24-25 1.6429161835276114E-4 7.301849704567161E-5 0.0 4.5636560653544754E-4 4.0160173375119383E-4 26-27 1.8254624261417903E-4 7.301849704567161E-5 0.0 6.571664734110446E-4 4.1985635801261177E-4 28-29 1.8254624261417903E-4 7.301849704567161E-5 0.0 0.0020080086687559694 4.746202307968655E-4 30-31 2.5556473965985063E-4 9.127312130708951E-5 0.0 0.007831233808148281 4.746202307968655E-4 32-33 2.9207398818268646E-4 1.0952774556850741E-4 0.0 0.020043577439036855 5.111294793197013E-4 34-35 2.9207398818268646E-4 1.0952774556850741E-4 0.0 0.03607113754056178 6.206572248882087E-4 36-37 2.9207398818268646E-4 1.0952774556850741E-4 0.0 0.05901720023716408 6.206572248882087E-4 38-39 2.9207398818268646E-4 1.4603699409134323E-4 0.0 0.0919667970290234 6.206572248882087E-4 40-41 2.9207398818268646E-4 1.8254624261417903E-4 0.0 0.1267601108712859 6.936757219338803E-4 42-43 2.9207398818268646E-4 1.8254624261417903E-4 0.0 0.16175422558042402 6.936757219338803E-4 44-45 2.9207398818268646E-4 1.8254624261417903E-4 0.0 0.20038101051758433 7.301849704567161E-4 46-47 2.9207398818268646E-4 1.8254624261417903E-4 0.0 0.2407419847595793 8.032034675023877E-4 48-49 2.9207398818268646E-4 1.8254624261417903E-4 0.0 0.28159583385663256 8.397127160252235E-4 50-51 2.9207398818268646E-4 1.8254624261417903E-4 0.0 0.3186527211073109 8.397127160252235E-4 52-53 2.9207398818268646E-4 1.8254624261417903E-4 0.0 0.3558921546006034 8.944765888094773E-4 54-55 2.9207398818268646E-4 1.8254624261417903E-4 0.0 0.39490228664725346 9.49240461593731E-4 56-57 2.9207398818268646E-4 1.8254624261417903E-4 0.0 0.43765461666749417 9.49240461593731E-4 58-59 2.9207398818268646E-4 1.8254624261417903E-4 0.0 0.47876403050420735 9.674950858551488E-4 60-61 2.9207398818268646E-4 1.8254624261417903E-4 0.0 0.5183218012786999 0.0010040043343779847 62-63 2.9207398818268646E-4 1.8254624261417903E-4 0.0 0.559339941994106 0.0011682959527307458 64-65 2.9207398818268646E-4 1.8254624261417903E-4 0.0 0.60380820669492 0.0011682959527307458 66-67 2.9207398818268646E-4 2.1905549113701483E-4 0.0 0.6546290806387074 0.0011865505769921637 68-69 2.9207398818268646E-4 2.1905549113701483E-4 0.0 0.7036427467806144 0.0012048052012535815 70-71 2.9207398818268646E-4 2.1905549113701483E-4 0.0 0.7508126958721184 0.001296078322560671 72-73 4.0160173375119383E-4 2.1905549113701483E-4 0.0 0.7974167516115183 0.0013690968196063426 74-75 4.0160173375119383E-4 2.1905549113701483E-4 0.0 0.8467042371173465 0.0013873514438677607 76-77 4.0160173375119383E-4 2.1905549113701483E-4 0.0 0.8988576986322174 0.0014238606923905963 78-79 4.0160173375119383E-4 2.1905549113701483E-4 0.0 0.9549906682360776 0.0014603699409134322 80-81 4.0160173375119383E-4 2.1905549113701483E-4 0.0 1.0125474985323282 0.0015516430622205216 82-83 4.0160173375119383E-4 2.1905549113701483E-4 0.0 1.0682971210266985 0.001679425432050447 84-85 4.1985635801261177E-4 2.1905549113701483E-4 0.0 1.125415840340675 0.001679425432050447 86 4.3811098227402966E-4 2.1905549113701483E-4 0.0 1.1704865076421158 0.001679425432050447 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 8905 0.0 24.762817 1 GTACATG 7545 0.0 23.429903 1 TACATGG 7685 0.0 22.247757 2 TCAACGC 10480 0.0 20.863077 4 TATCAAC 10485 0.0 20.853128 2 CAACGCA 10570 0.0 20.685434 5 ACATGGG 7910 0.0 20.455942 3 ATCAACG 10685 0.0 20.419905 3 AACGCAG 10935 0.0 20.031034 6 GGTATCA 6665 0.0 20.03071 1 GAGTACT 4940 0.0 18.687498 12-13 GTACCTG 2565 0.0 18.486229 1 GAGTACA 6020 0.0 18.429733 1 AGAGTAC 8760 0.0 18.141523 10-11 ACGCAGA 12145 0.0 17.9553 7 TACCTGG 2630 0.0 17.951582 2 GTACTTT 5220 0.0 17.691729 14-15 AGTACAT 5765 0.0 17.412699 2 GTATAAG 745 0.0 17.302156 1 AGTACTT 5475 0.0 17.23797 12-13 >>END_MODULE