##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921427_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4605213 Sequences flagged as poor quality 0 Sequence length 101 %GC 49 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.955094368056375 33.0 31.0 34.0 30.0 34.0 2 32.06854883802335 34.0 31.0 34.0 30.0 34.0 3 32.19457818780586 34.0 31.0 34.0 30.0 34.0 4 35.724780808184114 37.0 35.0 37.0 35.0 37.0 5 35.52995138335621 37.0 35.0 37.0 33.0 37.0 6 35.564971261915574 37.0 35.0 37.0 33.0 37.0 7 35.49677376486169 37.0 35.0 37.0 33.0 37.0 8 35.45109813596027 37.0 35.0 37.0 33.0 37.0 9 37.08108723744157 39.0 37.0 39.0 34.0 39.0 10-11 36.99026527111775 39.0 37.0 39.0 33.5 39.0 12-13 36.870691431644964 39.0 37.0 39.0 33.0 39.0 14-15 38.17433069871035 40.0 38.0 41.0 33.0 41.0 16-17 38.07304287554126 40.0 38.0 41.0 33.0 41.0 18-19 37.97132923059151 40.0 38.0 41.0 33.0 41.0 20-21 37.86063717356831 40.0 38.0 41.0 33.0 41.0 22-23 37.82362857049175 40.0 38.0 41.0 33.0 41.0 24-25 37.87715009056041 40.0 38.0 41.0 33.0 41.0 26-27 37.763241135643455 40.0 38.0 41.0 33.0 41.0 28-29 37.63101760982608 40.0 38.0 41.0 32.0 41.0 30-31 37.49051878816463 40.0 37.5 41.0 32.0 41.0 32-33 37.32669216385865 40.0 37.0 41.0 32.0 41.0 34-35 37.17154635409915 40.0 37.0 41.0 31.0 41.0 36-37 37.06913893016458 40.0 37.0 41.0 31.0 41.0 38-39 37.03506461047513 40.0 37.0 41.0 31.0 41.0 40-41 36.871089567409804 40.0 37.0 41.0 31.0 41.0 42-43 36.634817651213964 40.0 36.0 41.0 30.0 41.0 44-45 36.42139907535221 39.0 36.0 41.0 30.0 41.0 46-47 36.1366696828138 39.0 35.0 40.5 29.5 41.0 48-49 35.79830498611031 39.0 35.0 40.0 28.5 41.0 50-51 35.52351324466426 39.0 35.0 40.0 28.0 41.0 52-53 35.21114039676341 38.0 34.5 40.0 27.0 41.0 54-55 34.88165237959677 38.0 34.0 40.0 26.5 41.0 56-57 34.500988770769126 38.0 34.0 40.0 26.0 41.0 58-59 34.10543779408249 37.0 33.0 40.0 25.0 41.0 60-61 33.67688769227395 36.5 33.0 39.5 24.0 41.0 62-63 33.23530920285337 36.0 32.5 39.0 22.5 40.0 64-65 32.715615868364836 35.5 32.0 39.0 22.0 40.0 66-67 32.18466843987456 35.0 31.0 38.0 20.0 40.0 68-69 31.67431072134991 35.0 31.0 37.5 18.5 39.5 70-71 31.117382952753758 34.5 30.0 37.0 17.0 39.0 72-73 30.563044098068865 34.0 30.0 36.0 13.0 39.0 74-75 30.03900449338608 34.0 29.0 36.0 9.0 38.5 76-77 28.756350249163283 32.5 28.0 34.5 7.5 36.0 78-79 29.68489492234127 34.0 29.5 35.0 7.5 37.0 80-81 29.707802006117852 34.0 30.0 35.0 7.0 36.5 82-83 29.364001078777463 34.0 29.0 35.0 2.0 36.0 84-85 28.86530590441745 34.0 29.0 35.0 2.0 36.0 86-87 28.335514231372144 33.0 28.5 35.0 2.0 35.0 88-89 27.78481527347378 33.0 27.0 35.0 2.0 35.0 90-91 27.301270104118963 33.0 26.0 35.0 2.0 35.0 92-93 26.855082707357944 32.5 25.0 34.0 2.0 35.0 94-95 26.34469035417037 32.0 25.0 34.0 2.0 35.0 96-97 25.564923164248864 32.0 23.5 34.0 2.0 35.0 98-99 24.54602295268427 31.5 10.5 34.0 2.0 35.0 100-101 20.95340584680882 27.0 2.0 32.5 2.0 34.5 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 29398.0 3 15886.0 4 9351.0 5 7006.0 6 6249.0 7 6328.0 8 7421.0 9 9059.0 10 10545.0 11 12388.0 12 15372.0 13 17924.0 14 19698.0 15 22435.0 16 25324.0 17 30144.0 18 30959.0 19 26884.0 20 27195.0 21 28740.0 22 30684.0 23 34073.0 24 38352.0 25 45318.0 26 53162.0 27 63890.0 28 77349.0 29 94139.0 30 115229.0 31 143574.0 32 182956.0 33 245649.0 34 346997.0 35 521978.0 36 804415.0 37 993708.0 38 441045.0 39 14389.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.55883118577727 17.262072419376516 13.336195724841835 24.84290067000438 2 16.338440806103865 18.78349600767652 38.587639703093 26.290423483126624 3 20.47782918862763 22.23522030961893 27.630217997976526 29.65673250377691 4 14.158753046374423 14.792820464682915 34.351804531405904 36.696621957536756 5 15.760780700586748 35.147204343266964 32.65085076707902 16.441164189067266 6 35.392381585205825 32.7910119332292 16.650830006838046 15.16577647472693 7 31.68233716455946 29.744464439266217 19.154551521411324 19.418646874763 8 28.12054855981203 33.48728582275603 18.776493982940814 19.615671634491125 9 26.873608147307408 16.56230261936733 18.976730983320156 37.58735825000511 10-11 26.857234706839243 24.79524783706075 25.95694466301098 22.390572793089028 12-13 26.87204350834148 21.759419964131396 26.694330687130886 24.674205840396237 14-15 23.87542831552531 23.419394980928082 24.284071122296137 28.421105581250472 16-17 24.45026118302688 26.42752992377116 24.859725789047527 24.262483104154438 18-19 24.392605079256118 25.701943985245784 26.30362577469409 23.60182516080401 20-21 24.85681152293372 24.949265806771958 26.30043634772889 23.893486322565426 22-23 24.554745768713495 24.64199897942093 26.21913905096574 24.58411620089984 24-25 24.36828403837275 24.829485157532698 26.35952725581967 24.442703548274878 26-27 24.367560206569905 25.05370850099989 26.304009174127614 24.27472211830259 28-29 24.339069649852433 25.173203715979355 26.229747469438212 24.257979164729992 30-31 24.49609245132692 25.103239674783893 26.081239749050013 24.31942812483917 32-33 24.33650826948119 25.104851286364344 26.06168611791444 24.496954326240026 34-35 24.4834181969959 25.10819601214983 26.191578550988886 24.216807239865386 36-37 24.513320893152162 25.099862586127987 26.071782053237968 24.315034467481883 38-39 24.468427165109574 25.20696996235725 26.02996325854916 24.29463961398401 40-41 24.592434816122058 25.121857165646578 26.02442279856485 24.26128521966651 42-43 24.473911392642833 25.060485274144355 25.992191392638492 24.473411940574323 44-45 24.437503956689735 25.116670089010995 25.980729685798387 24.465096268500883 46-47 24.53074373909592 25.11415177992069 25.985728923392198 24.369375557591194 48-49 24.567218988890836 25.24544950062122 25.76388879086894 24.42344271961901 50-51 24.469492370690343 25.462737508945622 25.661525518819005 24.406244601545026 52-53 24.57732629464367 25.355015294394708 25.620893360290292 24.446765050671335 54-55 24.498406740808846 25.245698938507623 25.749181437846385 24.506712882837142 56-57 24.49346536691697 25.37531428876684 25.720305825757666 24.410914518558524 58-59 24.597094706345327 25.268419857743908 25.726972144528332 24.407513291382433 60-61 24.640545585037017 25.282200841917362 25.695179007875197 24.38207456517042 62-63 24.471867978151852 25.38668112756337 25.726189334733963 24.41526155955081 64-65 24.547701743741378 25.196745832614898 25.711553236686107 24.543999186957617 66-67 24.50436064445607 25.313047958834332 25.648828877832443 24.533762518877154 68-69 24.481755463062026 25.34078138973797 25.70210656958033 24.475356577619674 70-71 24.495700296057652 25.130131263264367 25.747438338515565 24.62673010216242 72-73 24.66041843243579 25.225326983153312 25.60712409915908 24.507130485251817 74-75 24.43291155713423 25.444170714589177 25.51936284177141 24.603554886505187 76-77 24.528715127119384 25.239971596354575 25.608968494606792 24.62234478191925 78-79 24.48749312084976 25.208129267721585 25.722236075594868 24.582141535833784 80-81 24.4464631246215 25.40177745224026 25.62584877971218 24.52591064342607 82-83 24.57660573678687 25.29961477673482 25.57561669552049 24.548162790957814 84-85 24.510240318639575 25.37395007671592 25.506586253857648 24.609223350786852 86-87 24.4844724871913 25.358944720023878 25.62829321168754 24.528289581097276 88-89 24.453830548464918 25.188543752607366 25.639221553945006 24.718404144982706 90-91 24.492248638873793 25.286980446377427 25.586085219366872 24.634685695381904 92-93 24.54679932556779 25.379911244512527 25.664411534867714 24.40887789505197 94-95 24.587860049350276 25.27992573027821 25.55206345500791 24.580150765363598 96-97 24.461743658253855 25.25961126280738 25.66490233795632 24.613742740982445 98-99 24.45290379576291 25.227840024878574 25.616383112627222 24.702873066731296 100-101 24.903493391555802 24.746854740181366 25.73648179990471 24.613170068358123 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 263.0 1 224.0 2 396.0 3 591.5 4 436.5 5 353.5 6 667.0 7 1492.5 8 2216.5 9 2138.5 10 1590.0 11 1166.0 12 1099.5 13 1177.0 14 1271.0 15 1348.5 16 1440.0 17 1621.0 18 1765.0 19 1916.0 20 2100.5 21 2210.5 22 2424.0 23 2793.0 24 3193.5 25 3781.0 26 4678.5 27 6054.5 28 7989.0 29 10638.5 30 14386.0 31 18810.5 32 24564.0 33 31514.0 34 39223.0 35 47912.5 36 58415.0 37 70055.0 38 81078.0 39 92423.5 40 104768.0 41 116834.5 42 129241.5 43 142693.5 44 155828.0 45 169689.0 46 182280.5 47 194295.5 48 207815.0 49 214498.0 50 212163.0 51 209988.5 52 208996.5 53 206564.0 54 203016.5 55 194948.5 56 181692.0 57 166467.0 58 151765.0 59 136321.0 60 119812.5 61 102474.0 62 83681.5 63 64222.5 64 47227.0 65 35297.0 66 26941.5 67 21001.5 68 16327.0 69 12603.0 70 9803.5 71 7553.0 72 5640.5 73 4427.5 74 3511.5 75 2627.5 76 1877.5 77 1218.5 78 774.5 79 452.0 80 271.5 81 147.5 82 71.0 83 40.0 84 27.5 85 16.0 86 6.0 87 4.5 88 2.5 89 0.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.5 96 0.5 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.31803089238217647 2 0.0 3 0.00568920482071079 4 0.06559957161590571 5 3.474323554632544E-4 6 0.06562128613812217 7 0.07526253400222747 8 0.10588001032742678 9 0.09404559571945967 10-11 0.09834507111831743 12-13 0.0984102146849668 14-15 0.06574071601031267 16-17 0.035622673696091796 18-19 0.03871699311193641 20-21 0.028576311236852673 22-23 0.0422130311887854 24-25 0.03434151688532105 26-27 0.020856798588903488 28-29 0.02382083087144938 30-31 0.003300607376900917 32-33 0.005178913548624135 34-35 0.008164660353386477 36-37 0.01108526359149946 38-39 0.01607960370128374 40-41 0.0206179388445225 42-43 0.0036154679490394905 44-45 0.01453787262391555 46-47 0.024873985198947363 48-49 0.003072604893628156 50-51 0.00667721558155942 52-53 0.002052022349454846 54-55 0.004060615654476785 56-57 0.003745755082338211 58-59 0.0014657302496106043 60-61 0.005385201509680443 62-63 0.013278430335361252 64-65 0.0062320678761221245 66-67 0.038326131712040246 68-69 0.06186467379467574 70-71 0.011628126646910795 72-73 0.031681487913805505 74-75 0.050757695680959815 76-77 0.3094970851511103 78-79 0.07481738629679018 80-81 0.0335489368244205 82-83 0.027349440731623053 84-85 0.019293352989318845 86-87 0.11747556519101288 88-89 0.5308332101034198 90-91 0.13003741629323118 92-93 0.04842338454269107 94-95 0.008153803092278252 96-97 0.005450345076329803 98-99 0.009706391430754668 100-101 0.007534939209109329 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4605213.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.26094769199278 #Duplication Level Percentage of deduplicated Percentage of total 1 70.63935352786281 36.21040206187961 2 15.95371138304658 16.356047293990013 3 5.67065117114664 8.720488591910566 4 2.589100720466416 5.308790264045192 5 1.3399205202268254 3.434279784938753 6 0.8418949058269753 2.589379843785107 7 0.5525336933027628 1.9826380525319556 8 0.38016061304395804 1.5589914639841795 9 0.27926810863782026 1.2883993118032555 >10 1.6073790479752788 15.016579460452888 >50 0.10597961270057317 3.712085748781872 >100 0.0390719262079602 3.2381663658718365 >500 7.628633267602472E-4 0.2553345046438684 >1k 1.695249829242271E-4 0.207169868966724 >5k 4.2381245731024944E-5 0.12124738241431297 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5581 0.12118874849002641 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 2.17145222164534E-5 0.0 3 0.0 0.0 0.0 2.17145222164534E-5 0.0 4 0.0 0.0 0.0 2.17145222164534E-5 0.0 5 0.0 0.0 0.0 2.17145222164534E-5 0.0 6 0.0 0.0 0.0 2.17145222164534E-5 2.17145222164534E-5 7 0.0 2.17145222164534E-5 0.0 2.17145222164534E-5 2.17145222164534E-5 8 0.0 2.17145222164534E-5 0.0 2.17145222164534E-5 2.17145222164534E-5 9 0.0 2.17145222164534E-5 0.0 2.17145222164534E-5 2.17145222164534E-5 10-11 0.0 2.17145222164534E-5 0.0 4.34290444329068E-5 5.428630554113349E-5 12-13 0.0 2.17145222164534E-5 0.0 6.514356664936019E-5 2.605742665974408E-4 14-15 0.0 2.17145222164534E-5 0.0 6.514356664936019E-5 4.1257592211261455E-4 16-17 0.0 2.17145222164534E-5 0.0 7.60008277575869E-5 4.777194887619747E-4 18-19 0.0 4.34290444329068E-5 0.0 1.0857261108226699E-4 5.211485331948815E-4 20-21 0.0 4.34290444329068E-5 0.0 1.1942987219049368E-4 5.428630554113349E-4 22-23 0.0 8.68580888658136E-5 0.0 2.1714522216453397E-4 5.862920998442417E-4 24-25 0.0 8.68580888658136E-5 0.0 2.7143152770566745E-4 5.862920998442417E-4 26-27 0.0 8.68580888658136E-5 0.0 3.040033110303476E-4 6.188638831689218E-4 28-29 0.0 8.68580888658136E-5 0.0 6.731501887100554E-4 6.731501887100554E-4 30-31 0.0 8.68580888658136E-5 0.0 0.0021388804383206594 6.731501887100554E-4 32-33 0.0 8.68580888658136E-5 0.0 0.005157199026407682 6.731501887100554E-4 34-35 0.0 9.771534997404029E-5 0.0 0.009272100986425601 6.948647109265087E-4 36-37 0.0 1.0857261108226699E-4 0.0 0.016296748923448276 6.948647109265087E-4 38-39 0.0 1.0857261108226699E-4 0.0 0.026046569398635852 7.274364942511888E-4 40-41 0.0 1.0857261108226699E-4 0.0 0.03703411764016127 7.382937553594155E-4 42-43 0.0 1.3028713329872038E-4 0.0 0.04818452479831009 7.382937553594155E-4 44-45 0.0 1.3028713329872038E-4 0.0 0.0597366506174633 7.708655386840956E-4 46-47 0.0 1.520016555151738E-4 0.0 0.07216821458638287 8.251518442252291E-4 48-49 0.0 1.520016555151738E-4 0.0 0.08542493039952767 9.228671941992694E-4 50-51 0.0 1.520016555151738E-4 0.0 0.09827992755166808 9.771534997404028E-4 52-53 0.0 1.520016555151738E-4 0.0 0.11062463343172184 0.001042297066389763 54-55 0.0 1.520016555151738E-4 0.0 0.12430478242808747 0.0010640115886062164 56-57 0.0 1.520016555151738E-4 0.0 0.13839750734656575 0.001074868849714443 58-59 0.0 1.520016555151738E-4 0.0 0.1537931035980312 0.0010857261108226698 60-61 0.0 1.520016555151738E-4 0.0 0.16812468826089044 0.0010857261108226698 62-63 0.0 1.520016555151738E-4 0.0 0.18382428782338622 0.0011074406330391232 64-65 0.0 1.520016555151738E-4 0.0 0.1990244533749036 0.0011291551552555766 66-67 0.0 1.520016555151738E-4 0.0 0.21489776911513103 0.0011291551552555766 68-69 0.0 1.520016555151738E-4 0.0 0.23200881262169631 0.0011291551552555766 70-71 0.0 1.520016555151738E-4 0.0 0.24922842873934387 0.00115086967747203 72-73 2.17145222164534E-5 2.1714522216453397E-4 0.0 0.26575318014606486 0.001226870505229617 74-75 2.17145222164534E-5 2.6057426659744075E-4 0.0 0.28236478964165174 0.0013354431163118841 76-77 2.17145222164534E-5 2.6057426659744075E-4 0.0 0.30031184225355045 0.0013571576385283373 78-79 2.17145222164534E-5 2.6057426659744075E-4 0.0 0.3188560442264017 0.0014657302496106045 80-81 3.25717833246801E-5 2.6057426659744075E-4 0.0 0.3382471125656946 0.0014983020329352845 82-83 4.34290444329068E-5 2.6057426659744075E-4 0.0 0.3579421842160178 0.0015634455995846446 84-85 4.34290444329068E-5 2.7143152770566745E-4 0.0 0.3788424118493542 0.0015960173829093248 86-87 4.34290444329068E-5 2.8228878881389415E-4 0.0 0.3998729266159893 0.0016611609495586848 88-89 4.34290444329068E-5 2.8228878881389415E-4 0.0 0.4222931708044775 0.0017371617773162718 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTACCTG 6210 0.0 35.899837 1 GTATCAA 9370 0.0 34.875687 1 TACCTGG 6495 0.0 33.790146 2 TCAACGC 11595 0.0 27.573408 4 CAACGCA 11765 0.0 27.199383 5 TATCAAC 12065 0.0 26.655607 2 ATCAACG 12050 0.0 26.531963 3 GGTATCA 6275 0.0 26.494148 1 ACCTGGG 8090 0.0 26.07209 3 AACGCAG 12715 0.0 25.392603 6 GTACATG 13050 0.0 24.128439 1 TACATGG 13190 0.0 23.265636 2 ACGCAGA 14720 0.0 21.805822 7 ACATGGG 13465 0.0 21.45056 3 CGCAGAG 15645 0.0 20.54714 8 GTATAGG 1215 0.0 19.603426 1 CCTGGGG 8095 0.0 18.896664 4 GTACACG 1185 0.0 18.491737 1 CATGGGG 10330 0.0 18.395254 4 AGAGTAC 13845 0.0 18.244759 10-11 >>END_MODULE