##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921424_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 6538324 Sequences flagged as poor quality 0 Sequence length 98 %GC 49 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.507095090423785 31.0 30.0 34.0 25.0 34.0 2 29.58464462758346 31.0 30.0 34.0 25.0 34.0 3 29.710067289415452 31.0 30.0 34.0 25.0 34.0 4 33.18017507238858 37.0 35.0 37.0 27.0 37.0 5 33.126622510600576 37.0 35.0 37.0 27.0 37.0 6 33.223544749388374 37.0 35.0 37.0 27.0 37.0 7 33.080983597631445 37.0 35.0 37.0 26.0 37.0 8 33.04413944613329 37.0 35.0 37.0 26.0 37.0 9 34.38991873146696 38.0 35.0 39.0 27.0 39.0 10-11 34.22815640521944 38.0 35.0 39.0 26.0 39.0 12-13 34.02503080300089 38.0 35.0 39.0 25.0 39.0 14-15 34.89932832940062 39.0 35.0 40.0 24.5 41.0 16-17 34.71453227157296 39.0 34.5 40.0 23.5 41.0 18-19 34.50798323851801 38.5 34.0 40.0 21.0 41.0 20-21 34.369276973732106 39.0 34.0 40.0 19.0 41.0 22-23 34.3827721752547 39.0 34.0 40.0 18.5 41.0 24-25 34.20270056974846 39.0 34.0 40.0 18.0 41.0 26-27 33.873952789736336 38.0 33.5 40.0 16.5 41.0 28-29 33.584519748486 38.0 33.0 40.0 13.0 41.0 30-31 33.278111714867606 38.0 33.0 40.0 9.5 41.0 32-33 32.94809365519359 38.0 32.0 40.0 9.0 41.0 34-35 32.47597786527557 38.0 31.5 40.0 5.0 41.0 36-37 32.03754914868092 37.5 30.5 40.0 2.0 41.0 38-39 31.74791162077621 37.0 30.0 40.0 2.0 41.0 40-41 31.423438101262647 37.0 30.0 40.0 2.0 41.0 42-43 31.08442369940676 37.0 30.0 40.0 2.0 41.0 44-45 30.710917736716624 36.0 29.0 39.0 2.0 40.0 46-47 30.35298617810925 36.0 28.0 39.0 2.0 40.0 48-49 30.074401100343145 36.0 27.5 39.0 2.0 40.0 50-51 29.399135695936756 34.5 26.5 38.5 2.0 39.5 52-53 29.99486863911914 35.5 28.5 38.5 2.0 40.0 54-55 30.38262672513629 36.0 29.0 39.0 2.0 40.0 56-57 30.195428981494338 36.0 28.0 39.0 2.0 40.0 58-59 29.822880756597563 35.0 28.0 39.0 2.0 40.0 60-61 29.32667339520036 35.0 27.0 39.0 2.0 40.0 62-63 28.800233821389092 34.5 26.0 38.0 2.0 40.0 64-65 28.215436631772914 34.0 25.5 38.0 2.0 40.0 66-67 27.685547014800736 34.0 24.5 37.0 2.0 39.5 68-69 27.132283288500233 33.5 22.5 36.5 2.0 39.0 70-71 26.57105980064616 33.0 21.5 36.0 2.0 39.0 72-73 25.979050824033806 32.5 19.0 35.5 2.0 38.5 74-75 25.34134894508134 32.0 16.0 35.0 2.0 37.5 76-77 24.707902208578222 31.5 9.0 35.0 2.0 37.0 78-79 24.09276276305671 31.0 4.5 34.5 2.0 36.0 80-81 23.456101288342396 31.0 2.0 34.0 2.0 36.0 82-83 22.771763528390455 30.0 2.0 34.0 2.0 35.0 84-85 22.097570187711714 29.5 2.0 34.0 2.0 35.0 86-87 21.415300388907006 29.0 2.0 34.0 2.0 35.0 88-89 20.701517086029998 28.5 2.0 34.0 2.0 35.0 90-91 19.907266831683472 27.0 2.0 33.5 2.0 35.0 92-93 19.04307915912396 25.5 2.0 33.0 2.0 34.5 94-95 18.104408255081886 24.5 2.0 32.5 2.0 34.0 96-97 17.20914029344523 21.5 2.0 32.0 2.0 34.0 98 16.60367381610333 18.0 2.0 32.0 2.0 34.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 322418.0 3 52057.0 4 38994.0 5 32742.0 6 31062.0 7 33287.0 8 37746.0 9 43104.0 10 47541.0 11 51893.0 12 55074.0 13 58838.0 14 52781.0 15 54436.0 16 59682.0 17 68315.0 18 75051.0 19 73523.0 20 77389.0 21 82755.0 22 90197.0 23 98018.0 24 107947.0 25 118332.0 26 130945.0 27 146532.0 28 165539.0 29 188590.0 30 218056.0 31 256960.0 32 309303.0 33 383715.0 34 491948.0 35 641071.0 36 791674.0 37 742511.0 38 294736.0 39 13562.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.79164780426249 16.82251391976279 12.806458364258456 24.579379911716266 2 16.290273244379346 18.17644582617141 38.948857859029474 26.58442307041977 3 20.714231388358 21.801254944233285 27.157041566068056 30.327472101340657 4 13.625847814649761 13.931261555544197 34.14909111943516 38.293799510370874 5 15.536902839739518 36.03705205806506 32.35135941720679 16.074685684988637 6 36.33949571292318 32.584186606297834 15.96587173418777 15.110445946591215 7 32.403388886508715 30.167944818131186 18.22701622528108 19.201650070079015 8 28.834475863077554 33.83992488246823 17.913949550830694 19.41164970362352 9 27.35801002951585 16.056678512166112 18.30479950757965 38.280511950738386 10-11 27.25444894961629 24.797900173336046 25.297670606136187 22.649980270911477 12-13 27.1103292697365 21.67972352979507 26.43105422544626 24.77889297502217 14-15 24.100598618100587 23.221008530042152 23.794845782433484 28.883547069423777 16-17 24.61846959225385 26.585218241198298 24.35063328422351 24.44567888232434 18-19 24.666528531599237 25.561501450647757 26.11519454625614 23.656775471496864 20-21 25.151308827673642 24.736672355369365 25.98239568726024 24.12962312969676 22-23 24.84231692745534 24.516482593679573 25.931054480740713 24.710145998124375 24-25 24.445690625665538 24.77606044380258 26.0791428980514 24.699106032480486 26-27 24.650851479086143 24.921518502927555 26.021507022310665 24.406122995675634 28-29 24.569155476921996 25.09795730489708 25.926099695791617 24.406787522389312 30-31 24.701768846169767 24.985452372118413 25.900424519101904 24.412354262609913 32-33 24.4670200805474 25.00283232418955 25.824615601397856 24.705531993865197 34-35 24.679392758563953 25.024374772404233 25.96630550006499 24.32992696896682 36-37 24.756918957647315 25.082930227801597 25.746164286995494 24.413986527555597 38-39 24.796320051646887 24.93268992125065 25.84048670761019 24.430503319492278 40-41 24.77630537781506 24.99424935223981 25.781251742402052 24.448193527543083 42-43 24.775607459656012 24.79672024490831 25.87675530781649 24.55091698761919 44-45 24.776354362006664 25.024011588906838 25.746696225226014 24.452937823860484 46-47 24.84819294296845 25.08521011320404 25.59826177672099 24.468335167106524 48-49 24.84613998216127 25.13367327606647 25.429099881907753 24.591086859864507 50-51 24.702643634036324 25.309655412987393 25.34430029107232 24.643400661903964 52-53 24.743749011430783 25.305794846577136 25.49045342169578 24.460002720296302 54-55 24.64902536184958 25.066557127611567 25.609919857650503 24.674497652888352 56-57 24.73508091292591 25.211874537493813 25.53028789967723 24.52275664990305 58-59 24.697424325338023 25.197010827794415 25.598564594772405 24.507000252095157 60-61 24.762286544470623 25.01661522851224 25.585583992805066 24.635514234212074 62-63 24.549340247037193 25.189889046369522 25.62126775770096 24.639502948892325 64-65 24.625394562812755 24.990817146688133 25.708882827560664 24.67490546293845 66-67 24.609624695320633 25.22068703961603 25.576768970840387 24.592919294222952 68-69 24.720903245100136 25.155143869834674 25.533963751651417 24.589989133413773 70-71 24.567801336948875 25.013233256693525 25.666025256791258 24.752940149566342 72-73 24.726067692604584 25.086691134342104 25.460743270557 24.72649790249631 74-75 24.557230932111608 25.22801308936153 25.519669527724258 24.6950864508026 76-77 24.73639643192706 25.021918471811805 25.542085117493997 24.69959997876714 78-79 24.730527395395683 24.9040204043633 25.602854791897496 24.76259740834352 80-81 24.58972358502443 25.130199021824183 25.44400860207257 24.83606879107882 82-83 24.706953874521027 25.231326527672405 25.340260638246793 24.72145895955978 84-85 24.793858185859875 25.062239605893655 25.376064232747865 24.767837975498608 86-87 24.745356901254237 25.056166640962985 25.49001611651571 24.708460341267067 88-89 24.773890838406402 24.860641529504107 25.474219057479708 24.891248574609783 90-91 24.775325881168055 24.88778583924732 25.390180212454922 24.94670806712971 92-93 24.733688643007024 25.094956073766916 25.506817074557965 24.664538208668098 94-95 24.794428873842172 24.82562384958445 25.519541144260288 24.860406132313095 96-97 24.84012380841772 24.946769385621927 25.409391816034997 24.803714989925357 98 24.87921566181645 24.899431513655763 25.387991507498835 24.833361317028952 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 779.0 1 602.0 2 714.0 3 1037.0 4 843.5 5 692.0 6 1205.0 7 2521.5 8 3795.0 9 3917.0 10 3128.0 11 2604.0 12 2804.5 13 3255.5 14 3751.5 15 4299.0 16 4728.5 17 5064.0 18 5408.0 19 5585.5 20 5525.0 21 5430.5 22 5733.0 23 6568.0 24 7550.5 25 8837.5 26 11171.5 27 14517.5 28 18879.5 29 24575.0 30 31130.0 31 38387.5 32 46638.0 33 55121.5 34 65540.0 35 78326.5 36 91277.5 37 105169.0 38 119565.5 39 133732.0 40 148502.5 41 164826.5 42 182419.0 43 203091.0 44 223600.0 45 240355.5 46 258578.5 47 277809.5 48 288750.5 49 291140.0 50 291673.0 51 291417.0 52 293949.0 53 297688.0 54 295890.5 55 285690.0 56 268889.5 57 252433.5 58 234900.0 59 213669.5 60 188425.5 61 158543.0 62 129180.5 63 100102.5 64 74828.5 65 57050.5 66 43620.5 67 33504.0 68 25868.0 69 20079.5 70 15457.0 71 12012.0 72 9627.0 73 7520.5 74 5827.0 75 4443.5 76 3066.5 77 2003.5 78 1274.0 79 827.5 80 545.0 81 311.5 82 188.0 83 117.5 84 64.0 85 42.5 86 30.0 87 22.0 88 17.0 89 17.0 90 16.5 91 12.0 92 11.5 93 9.5 94 9.0 95 8.5 96 6.5 97 6.5 98 5.5 99 2.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.46908045548064004 2 0.04871278939373454 3 0.05645177571499975 4 0.05478468182366 5 0.06536843386776182 6 0.0652766672315413 7 0.04349738556853408 8 0.020922793058282214 9 0.012541440283473258 10-11 0.015638564255916348 12-13 0.011715540557488434 14-15 0.015562092059065901 16-17 0.014307948030718576 18-19 0.05593176477641671 20-21 0.08401235545990074 22-23 0.10140978024337735 24-25 0.07013265173154466 26-27 0.08525120504887797 28-29 0.08612298809297307 30-31 0.05740767817563033 32-33 0.03322716953151909 34-35 0.3969748210703538 36-37 0.620074808161847 38-39 0.5697866915129932 40-41 0.56409716006732 42-43 0.5376836632751758 44-45 0.5226568765940629 46-47 0.5126849021247647 48-49 0.5019099695885367 50-51 0.5162638009373656 52-53 0.5969725574933271 54-55 0.5680660670838582 56-57 0.5254710534381594 58-59 0.5023305666712141 60-61 0.5161720343011451 62-63 0.5280558136917045 64-65 0.5462485493224258 66-67 0.5725091017208692 68-69 0.5267634335649319 70-71 0.47480822302473846 72-73 0.4568907873026788 74-75 0.437573910378256 76-77 0.45186656396960445 78-79 0.4454964299719622 80-81 0.44296520025621244 82-83 0.4628326769979585 84-85 0.42824430236250144 86-87 0.4317926122963622 88-89 0.45911612823102677 90-91 0.4419481200381015 92-93 0.4374744965223503 94-95 0.44756117928692435 96-97 0.44219283106802293 98 0.43713037163652335 >>END_MODULE >>Sequence Length Distribution pass #Length Count 98 6538324.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.326388620907075 #Duplication Level Percentage of deduplicated Percentage of total 1 72.82671120700488 35.92278658979291 2 13.373586139690902 13.193414143631395 3 5.266242833226609 7.7929422169140725 4 2.679925049402403 5.287640978469061 5 1.4968479390457732 3.6917051573887814 6 0.9421596455622473 2.7883999691963686 7 0.689727929553115 2.3815251527081394 8 0.4593203435685467 1.812529101468055 9 0.340253219914708 1.510511629952506 >10 1.758478149497498 15.437466658629726 >50 0.11170469853546988 3.766091693305855 >100 0.05129122794330352 4.555161366133263 >500 0.0028450044240136926 0.9213699668772715 >1k 8.128251175465201E-4 0.6311986372585338 >5k 9.378751315292395E-5 0.30725673827424493 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9065 0.13864409288985985 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 1.529443937008934E-5 0.0 3 0.0 0.0 0.0 4.5883318110268014E-5 0.0 4 0.0 0.0 0.0 9.176663622053603E-5 0.0 5 0.0 4.5883318110268014E-5 0.0 9.176663622053603E-5 0.0 6 0.0 4.5883318110268014E-5 0.0 9.176663622053603E-5 3.058887874017868E-5 7 0.0 6.117775748035736E-5 0.0 9.176663622053603E-5 3.058887874017868E-5 8 0.0 6.117775748035736E-5 0.0 1.0706107559062536E-4 4.5883318110268014E-5 9 0.0 6.117775748035736E-5 0.0 1.0706107559062536E-4 4.5883318110268014E-5 10-11 0.0 6.117775748035736E-5 0.0 1.0706107559062536E-4 4.5883318110268014E-5 12-13 0.0 6.117775748035736E-5 0.0 1.3764995433080405E-4 1.5294439370089338E-4 14-15 0.0 7.647219685044669E-5 0.0 1.6059161338593804E-4 2.1412215118125073E-4 16-17 0.0 1.0706107559062536E-4 0.0 2.447110299214294E-4 2.1412215118125073E-4 18-19 0.0 1.3764995433080405E-4 0.0 3.0588878740178677E-4 2.752999086616081E-4 20-21 0.0 1.8353327244107205E-4 0.0 3.4412488582701007E-4 3.517721055120548E-4 22-23 0.0 1.8353327244107205E-4 0.0 3.5177210551205475E-4 4.2059708267745677E-4 24-25 0.0 2.0647493149620607E-4 0.0 4.0530264330736746E-4 4.741276204727695E-4 26-27 0.0 2.2176937086629538E-4 0.0 5.200109385830375E-4 4.8177484015781417E-4 28-29 0.0 2.2941659055134006E-4 0.0 8.106052866147349E-4 4.894220598428588E-4 30-31 0.0 2.447110299214294E-4 0.0 0.0018659216031508994 4.894220598428588E-4 32-33 0.0 2.447110299214294E-4 0.0 0.003777726524412066 5.047164992129481E-4 34-35 0.0 3.0588878740178677E-4 0.0 0.006171306285831048 5.200109385830375E-4 36-37 0.0 3.441248858270101E-4 0.0 0.009857266174022578 5.200109385830375E-4 38-39 0.0 3.976554236223228E-4 0.0 0.015546797619695811 5.200109385830375E-4 40-41 0.0 4.664804007877248E-4 0.0 0.021825164981117487 5.505998173232162E-4 42-43 7.64721968504467E-6 4.894220598428588E-4 0.0 0.028050001804743846 5.582470370082608E-4 44-45 1.529443937008934E-5 4.894220598428588E-4 0.0 0.03435131082522065 5.658942566933056E-4 46-47 1.529443937008934E-5 4.894220598428588E-4 0.0 0.041119100246485185 6.270720141736629E-4 48-49 1.529443937008934E-5 4.894220598428588E-4 0.0 0.04839925338664771 6.270720141736629E-4 50-51 1.529443937008934E-5 5.123637188979928E-4 0.0 0.05592411755673166 6.270720141736629E-4 52-53 1.529443937008934E-5 5.353053779531268E-4 0.0 0.06311250406067365 6.347192338587075E-4 54-55 2.294165905513401E-5 6.882497716540201E-4 0.0 0.07083619594256876 6.729553322839309E-4 56-57 3.058887874017868E-5 7.494275291343776E-4 0.0 0.07909519320241701 6.882497716540201E-4 58-59 3.058887874017868E-5 7.953108472446456E-4 0.0 0.08766007924966704 7.035442110241095E-4 60-61 3.058887874017868E-5 8.564886047250029E-4 0.0 0.09647732354652355 7.111914307091542E-4 62-63 3.058887874017868E-5 8.641358244100476E-4 0.0 0.10505750403314366 7.341330897642882E-4 64-65 3.058887874017868E-5 8.870774834651816E-4 0.0 0.11278884313472382 7.341330897642882E-4 66-67 3.058887874017868E-5 9.48255240945539E-4 0.0 0.12246257603630534 7.341330897642882E-4 68-69 3.058887874017868E-5 9.635496803156283E-4 0.0 0.13212866171820178 7.341330897642882E-4 70-71 3.058887874017868E-5 9.864913393707623E-4 0.0 0.14203181121033465 7.647219685044668E-4 72-73 4.5883318110268014E-5 0.0010094329984258962 0.0 0.15249320773947575 9.329608015754496E-4 74-75 4.5883318110268014E-5 0.0010094329984258962 0.0 0.16225106005759274 9.788441196857177E-4 76-77 4.5883318110268014E-5 0.0010247274377959857 0.0 0.17197067627728452 0.0010247274377959857 78-79 4.5883318110268014E-5 0.0010247274377959857 0.0 0.18298267262374884 0.0010323746574810303 80-81 6.117775748035736E-5 0.0010247274377959857 0.0 0.1941858494623393 0.0010476690968511198 82-83 6.117775748035736E-5 0.0010247274377959857 0.0 0.20553432347494557 0.0011470829527567004 84-85 6.117775748035736E-5 0.001040021877166075 0.0 0.21702044744188265 0.001154730172441745 86 6.117775748035736E-5 0.001040021877166075 0.0 0.2257612195418887 0.0011623773921267896 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 7235 0.0 41.673683 1 GTATCAA 12925 0.0 41.455444 1 TCAACGC 16685 0.0 31.435726 4 TATCAAC 17230 0.0 30.680872 2 CAACGCA 17040 0.0 30.59247 5 ATCAACG 17565 0.0 29.88691 3 AACGCAG 17970 0.0 29.154491 6 GTACCTG 6700 0.0 28.443607 1 GTACATG 24810 0.0 27.608023 1 TACCTGG 6755 0.0 26.606295 2 TACATGG 25430 0.0 26.250568 2 ACATGGG 26155 0.0 24.523739 3 ACGCAGA 21545 0.0 23.970388 7 CGCAGAG 22570 0.0 22.876715 8 GAGTACA 18905 0.0 22.255053 1 AGTACAT 17780 0.0 21.480133 2 GCAGAGT 25150 0.0 20.147375 9 CATGGGG 20430 0.0 20.107744 4 ACCTGGG 9365 0.0 18.799536 3 AGAGTAC 21730 0.0 18.721956 10-11 >>END_MODULE