##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921424_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 6538324 Sequences flagged as poor quality 0 Sequence length 101 %GC 49 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.58587414756442 33.0 31.0 34.0 30.0 34.0 2 31.703866770750423 33.0 31.0 34.0 30.0 34.0 3 31.828796798690306 34.0 31.0 34.0 30.0 34.0 4 35.415384125962554 37.0 35.0 37.0 33.0 37.0 5 35.17243363895702 37.0 35.0 37.0 32.0 37.0 6 35.20843231384679 37.0 35.0 37.0 32.0 37.0 7 35.120692550568 37.0 35.0 37.0 32.0 37.0 8 35.061108320725616 37.0 35.0 37.0 32.0 37.0 9 36.62151003835233 39.0 37.0 39.0 32.0 39.0 10-11 36.50775642198215 39.0 37.0 39.0 32.0 39.0 12-13 36.3614661035458 39.0 37.0 39.0 32.0 39.0 14-15 37.55655654262468 40.0 38.0 41.0 32.0 41.0 16-17 37.43402491219462 40.0 37.5 41.0 32.0 41.0 18-19 37.30985180605917 40.0 37.0 41.0 32.0 41.0 20-21 37.175830304524524 40.0 37.0 41.0 31.0 41.0 22-23 37.128433831055176 40.0 37.0 41.0 31.5 41.0 24-25 37.172761016431735 40.0 37.0 41.0 31.0 41.0 26-27 37.031540498757785 40.0 37.0 41.0 31.0 41.0 28-29 36.862714512159386 40.0 37.0 41.0 30.5 41.0 30-31 36.68661976677815 40.0 36.5 41.0 30.0 41.0 32-33 36.48566658672773 39.0 36.0 41.0 30.0 41.0 34-35 36.3072724753316 39.0 36.0 40.5 30.0 41.0 36-37 36.16476913655548 39.0 35.5 40.0 30.0 41.0 38-39 36.09237137835323 39.0 35.0 40.0 29.5 41.0 40-41 35.880396642931736 39.0 35.0 40.0 28.5 41.0 42-43 35.58500932349024 39.0 35.0 40.0 27.5 41.0 44-45 35.326941965555704 38.0 35.0 40.0 27.0 41.0 46-47 34.98383691294589 38.0 34.0 40.0 26.0 41.0 48-49 34.56908360613515 38.0 34.0 40.0 24.0 41.0 50-51 34.22668026240363 38.0 33.0 40.0 23.5 41.0 52-53 33.84639710421203 38.0 33.0 40.0 23.0 41.0 54-55 33.45622586155106 37.0 33.0 40.0 21.5 41.0 56-57 33.00874398393228 37.0 32.0 39.5 19.5 41.0 58-59 32.54543220862105 36.0 31.0 39.0 18.0 40.0 60-61 32.05006940616586 35.5 31.0 39.0 14.0 40.0 62-63 31.54486715555852 35.0 30.5 38.5 10.5 40.0 64-65 30.958851993263107 35.0 29.5 38.0 7.5 40.0 66-67 30.359132325042317 34.0 29.0 37.5 6.5 39.5 68-69 29.793833404401497 34.0 28.5 37.0 2.0 39.0 70-71 29.171202436587727 34.0 27.5 36.0 2.0 39.0 72-73 28.55258342963732 33.0 26.0 35.5 2.0 38.5 74-75 27.972183773701026 33.0 26.0 35.0 2.0 37.5 76-77 26.899788692025663 31.5 25.5 34.0 2.0 36.0 78-79 27.815305344305358 33.0 26.0 35.0 2.0 36.0 80-81 27.800269457432822 33.0 26.0 35.0 2.0 36.0 82-83 27.381545867106006 33.0 26.0 35.0 2.0 36.0 84-85 26.788828605006422 32.5 25.0 35.0 2.0 35.0 86-87 26.153187804703467 32.0 24.0 34.0 2.0 35.0 88-89 25.514757757492593 32.0 21.5 34.0 2.0 35.0 90-91 24.904445619397265 31.0 19.5 34.0 2.0 35.0 92-93 24.329064910212466 31.0 17.0 34.0 2.0 35.0 94-95 23.66906909171219 31.0 4.5 34.0 2.0 35.0 96-97 22.71458358441705 30.0 2.0 34.0 2.0 35.0 98-99 21.51363116908859 29.5 2.0 34.0 2.0 35.0 100-101 18.11972586552762 23.5 2.0 31.5 2.0 34.5 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 62395.0 3 30324.0 4 18398.0 5 13964.0 6 12259.0 7 12678.0 8 15003.0 9 17707.0 10 21199.0 11 24820.0 12 29619.0 13 34868.0 14 39262.0 15 44853.0 16 51013.0 17 59004.0 18 60161.0 19 56221.0 20 57142.0 21 59531.0 22 63376.0 23 68343.0 24 76436.0 25 87519.0 26 102796.0 27 122311.0 28 147039.0 29 176857.0 30 211357.0 31 258291.0 32 322543.0 33 415549.0 34 556791.0 35 774064.0 36 1042657.0 37 1032548.0 38 350789.0 39 8637.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.795262029562 17.489783275654112 13.233492384593742 24.481462310190153 2 16.51183086063034 18.71865022290116 38.35435503043287 26.415163886035625 3 20.642425301046522 22.135417821782784 27.527756054159543 29.69440082301115 4 13.956765809803965 14.459194626394414 34.16993421642621 37.414105347375404 5 15.478463714753596 36.1030428287759 32.55031016514866 15.868183291321847 6 36.23669901397091 32.82431603127501 15.845424675060334 15.093560279693738 7 32.2968550717606 30.24187740937269 18.35153948076703 19.109728038099675 8 28.796063612482804 34.105422285313075 17.85387635696454 19.244637745239583 9 27.14167009317553 16.188608723100632 18.323856982469845 38.345864201253995 10-11 27.222777379535863 24.956260790325437 25.35601998260153 22.464941847537176 12-13 27.12375813560727 21.74014448043983 26.50249392831427 24.633603455638635 14-15 24.000277309643458 23.328566627467858 23.939053400777325 28.73210266211136 16-17 24.50634146214588 26.67772223727969 24.49675619368607 24.319180106888368 18-19 24.569928333692758 25.681884093837493 26.182234733261968 23.565952839207785 20-21 25.065407185209637 24.769425473137407 26.206513295808453 23.9586540458445 22-23 24.752701348698654 24.51122650690545 26.1499336602113 24.5861384841846 24-25 24.392831748501514 24.90114068877361 26.193424066723964 24.512603496000914 26-27 24.514964593069262 25.01776427310583 26.172996560959106 24.2942745728658 28-29 24.417480343520747 25.203968982258168 26.13848022427352 24.240070449947563 30-31 24.575011299128267 25.074979562152087 26.05797695513156 24.292032183588084 32-33 24.281591230065402 24.978512072586405 26.11374151332978 24.626155184018412 34-35 24.572465829692987 25.00707420187707 26.200893567294397 24.21956640113554 36-37 24.501615832288426 25.21919756365148 25.990697731333988 24.288488872726106 38-39 24.57099943072972 24.98548907644291 26.088778170675997 24.354733322151375 40-41 24.598200497504294 25.030032756470867 25.98197896934525 24.38978777667959 42-43 24.626788055504743 24.958650117128688 26.06935370293669 24.34520812442988 44-45 24.57895701324797 24.988420572161406 25.97599892068107 24.456623493909557 46-47 24.597559299351264 25.172996359593782 25.894920129137162 24.334524211917795 48-49 24.62089863522744 25.244109236254424 25.721093659545446 24.41389846897269 50-51 24.621951315575235 25.32955055854102 25.53945035559302 24.509047770290728 52-53 24.66340765375542 25.427749268297458 25.62736916228624 24.281473915660882 54-55 24.633688813698328 25.19178296846562 25.680949891133515 24.49357832670254 56-57 24.636729991777443 25.31799699974549 25.616324712699935 24.428948295777133 58-59 24.707312758971227 25.304781454916725 25.623559391002225 24.364346395109823 60-61 24.783702570270854 25.182885009883776 25.574809865053282 24.458602554792087 62-63 24.488765111841797 25.30650077557811 25.774218622547878 24.43051549003221 64-65 24.620569190189183 25.09922551406151 25.75764945391361 24.5225558418357 66-67 24.579385351463305 25.38242163662239 25.62424058636926 24.413952425545045 68-69 24.715931741897116 25.272873713756038 25.589779557002114 24.421414987344733 70-71 24.59109086260419 25.16202370415262 25.71764499112932 24.529240442113874 72-73 24.79976482157987 25.198085648884067 25.481303376796156 24.52084615273991 74-75 24.586314244864692 25.341732256475336 25.45563216976695 24.616321328893022 76-77 24.633975299195495 25.161713561266456 25.690548641468027 24.513762498070022 78-79 24.580357634129633 25.072767090135994 25.766295714893662 24.58057956084071 80-81 24.51487952672651 25.364852974857342 25.52017873209814 24.600088766318002 82-83 24.638720679986797 25.432841780452293 25.430072755741804 24.498364783819106 84-85 24.679466636153887 25.303454058197524 25.551903267952657 24.465176037695933 86-87 24.625912952924065 25.301511706185437 25.54820432016019 24.52437102073031 88-89 24.665473673044417 25.123154299735035 25.56849758903061 24.642874438189942 90-91 24.638116607585538 25.219065715733098 25.489662793468426 24.653154883212935 92-93 24.65102714143236 25.42647477813641 25.59892993795868 24.323568142472553 94-95 24.604185389475337 25.19568274688736 25.580000778547635 24.62013108508967 96-97 24.61455514062862 25.243061105405122 25.551322162171257 24.591061591795 98-99 24.67967786414638 25.204436163214865 25.549619960547144 24.566266012091607 100-101 25.23401216714138 24.562828677205957 25.638479718384676 24.56467943726799 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 268.0 1 234.5 2 464.0 3 737.0 4 545.0 5 394.5 6 889.5 7 2166.0 8 3310.5 9 3294.0 10 2396.5 11 1624.5 12 1438.5 13 1520.0 14 1700.0 15 1875.0 16 2111.0 17 2397.0 18 2737.5 19 3075.0 20 3344.5 21 3714.5 22 4287.5 23 5310.0 24 6398.0 25 7714.0 26 9543.5 27 12219.5 28 15996.5 29 20837.5 30 27097.0 31 34121.0 32 41700.0 33 49981.0 34 58687.0 35 69015.0 36 82576.0 37 96921.5 38 111100.5 39 124938.0 40 139323.5 41 153783.0 42 169840.0 43 191101.0 44 213277.0 45 235239.5 46 250183.5 47 262398.5 48 280172.0 49 288910.0 50 287918.5 51 287510.0 52 288446.5 53 289497.0 54 288916.5 55 280614.5 56 262871.5 57 242595.5 58 225219.0 59 207543.0 60 182499.5 61 154548.5 62 127120.5 63 98437.5 64 73424.0 65 55422.5 66 42318.0 67 32627.5 68 25291.5 69 19602.5 70 15384.5 71 11950.0 72 9236.0 73 7451.5 74 5843.5 75 4398.5 76 3307.5 77 2180.5 78 1355.0 79 838.5 80 538.5 81 315.0 82 162.0 83 75.0 84 35.0 85 19.0 86 12.5 87 9.5 88 6.0 89 2.5 90 2.0 91 1.0 92 0.0 93 0.0 94 0.0 95 1.0 96 1.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.3072652869450948 2 0.0 3 0.0058271814000040376 4 0.05912830260476538 5 5.047164992129481E-4 6 0.06169776841894039 7 0.07226622602367212 8 0.1017080218110941 9 0.09057366994966906 10-11 0.09393079939140367 12-13 0.09420609930006527 14-15 0.06289073468980735 16-17 0.034450724681126234 18-19 0.03682136278349008 20-21 0.027094099344113262 22-23 0.04058379486853206 24-25 0.03275304191104632 26-27 0.020295721044108553 28-29 0.022704595244897624 30-31 0.003196537828348672 32-33 0.0053607009992163125 34-35 0.007402508655123239 36-37 0.01027021603701499 38-39 0.01540914766536501 40-41 0.019806298984265693 42-43 0.003303598903939297 44-45 0.013275573373237544 46-47 0.023759911561433786 48-49 0.002523582496064741 50-51 0.006767789421264532 52-53 0.002263577026773222 54-55 0.004121851410239076 56-57 0.0032424211464589397 58-59 0.0011241412937015663 60-61 0.005138931628350017 62-63 0.0144150091063092 64-65 0.006714258883469219 66-67 0.03735666816144321 68-69 0.05951066358901761 70-71 0.01189142661024446 72-73 0.03074182313387957 74-75 0.048949853203970925 76-77 0.2977444984372142 78-79 0.07089737370004913 80-81 0.031521839541754124 82-83 0.026405849572459242 84-85 0.017940377381114793 86-87 0.11508300904023723 88-89 0.5151014235452388 90-91 0.1272497355591433 92-93 0.04591390698900819 94-95 0.007792516859060517 96-97 0.005490703733862072 98-99 0.009903149492132847 100-101 0.007180739284256944 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 6538324.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.08269585342401 #Duplication Level Percentage of deduplicated Percentage of total 1 66.89191628190714 28.818840842261075 2 15.836863592868818 13.645895548874625 3 6.3850736842275655 8.252585626178332 4 3.2978009891846094 5.683126280086455 5 1.9448239112391934 4.189412852819235 6 1.24459144737924 3.2172212873527553 7 0.8422119231265676 2.5399332089732467 8 0.5826173068482112 2.0080579383905994 9 0.4416579068202502 1.712503194371705 >10 2.306616967974403 17.70251105296635 >50 0.14775337667545435 4.344833022999691 >100 0.07308301948357068 5.621494760490939 >500 0.003670948688537281 1.0733690900018236 >1k 0.0011760875144952493 0.781746217298936 >5k 1.425560620062254E-4 0.40846907693411943 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9363 0.14320183582214646 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 3.058887874017868E-5 0.0 3 0.0 0.0 0.0 6.117775748035736E-5 0.0 4 0.0 0.0 0.0 1.0706107559062536E-4 0.0 5 0.0 3.058887874017868E-5 0.0 1.0706107559062536E-4 0.0 6 0.0 3.058887874017868E-5 0.0 1.0706107559062536E-4 0.0 7 0.0 3.058887874017868E-5 0.0 1.0706107559062536E-4 0.0 8 0.0 3.058887874017868E-5 0.0 1.0706107559062536E-4 1.529443937008934E-5 9 0.0 3.058887874017868E-5 0.0 2.2941659055134006E-4 1.529443937008934E-5 10-11 0.0 3.058887874017868E-5 0.0 2.523582496064741E-4 1.529443937008934E-5 12-13 0.0 3.8236098425223346E-5 0.0 2.752999086616081E-4 3.058887874017868E-5 14-15 0.0 8.411941653549136E-5 0.0 3.1353600708683145E-4 4.5883318110268014E-5 16-17 0.0 1.223555149607147E-4 0.0 3.517721055120548E-4 4.5883318110268014E-5 18-19 0.0 1.3764995433080405E-4 0.0 4.0530264330736746E-4 4.5883318110268014E-5 20-21 0.0 1.5294439370089338E-4 0.0 4.2059708267745677E-4 4.5883318110268014E-5 22-23 0.0 1.5294439370089338E-4 0.0 5.276581582680821E-4 4.5883318110268014E-5 24-25 0.0 1.6823883307098272E-4 0.0 6.117775748035735E-4 6.117775748035736E-5 26-27 0.0 1.8353327244107205E-4 0.0 7.035442110241095E-4 6.117775748035736E-5 28-29 0.0 1.8353327244107205E-4 0.0 9.559024606305836E-4 6.117775748035736E-5 30-31 0.0 1.988277118111614E-4 0.0 0.0019118049212611672 6.117775748035736E-5 32-33 0.0 1.988277118111614E-4 0.0 0.003724195986616754 6.117775748035736E-5 34-35 0.0 2.0647493149620607E-4 0.0 0.006018361892130154 9.176663622053603E-5 36-37 3.058887874017868E-5 2.752999086616081E-4 0.0 0.009711969000006728 9.176663622053603E-5 38-39 4.588331811026802E-5 3.517721055120548E-4 0.0 0.015279144930719248 9.176663622053603E-5 40-41 6.117775748035736E-5 3.670665448821441E-4 0.0 0.021427509557495162 9.176663622053603E-5 42-43 6.117775748035736E-5 3.976554236223228E-4 0.0 0.027468813108680448 9.94138559055807E-5 44-45 6.117775748035736E-5 3.976554236223228E-4 0.0 0.033770122129157254 1.1470829527567003E-4 46-47 6.117775748035736E-5 4.1294986299241214E-4 0.0 0.040384967156720894 1.5294439370089338E-4 48-49 6.117775748035736E-5 4.2059708267745677E-4 0.0 0.04742805648664704 1.8353327244107205E-4 50-51 6.117775748035736E-5 4.2824430236250145E-4 0.0 0.054647031869329205 1.911804921261167E-4 52-53 6.117775748035736E-5 4.2824430236250145E-4 0.0 0.06148364626775914 2.1412215118125073E-4 54-55 6.117775748035736E-5 4.894220598428587E-4 0.0 0.06880203550634689 2.3706381023638474E-4 56-57 6.117775748035736E-5 5.047164992129481E-4 0.0 0.07677808563784848 2.447110299214294E-4 58-59 6.117775748035736E-5 5.353053779531268E-4 0.0 0.0848611968449407 2.447110299214294E-4 60-61 6.117775748035736E-5 6.270720141736629E-4 0.0 0.09321196074100947 2.6000546929151873E-4 62-63 6.882497716540202E-5 6.423664535437522E-4 0.0 0.10135624970558205 3.0588878740178677E-4 64-65 7.647219685044669E-5 6.882497716540202E-4 0.0 0.10875111114102023 3.211832267718761E-4 66-67 7.647219685044669E-5 7.647219685044669E-4 0.0 0.11793542198275889 3.4412488582701007E-4 68-69 7.647219685044669E-5 7.800164078745562E-4 0.0 0.127027966188277 3.670665448821441E-4 70-71 7.647219685044669E-5 7.876636275596009E-4 0.0 0.13648757693867725 3.9000820393727815E-4 72-73 7.647219685044669E-5 8.029580669296902E-4 0.0 0.14640602087018018 5.123637188979928E-4 74-75 7.647219685044669E-5 8.182525062997797E-4 0.0 0.15558268449223378 5.429525976381716E-4 76-77 7.647219685044669E-5 8.411941653549135E-4 0.0 0.1649658230457836 5.582470370082608E-4 78-79 7.647219685044669E-5 8.411941653549135E-4 0.0 0.1753889834764995 5.658942566933056E-4 80-81 7.647219685044669E-5 8.794302637801369E-4 0.0 0.18603391327808166 5.735414763783502E-4 82-83 7.647219685044669E-5 8.870774834651816E-4 0.0 0.1967247263977741 6.423664535437522E-4 84-85 7.647219685044669E-5 8.870774834651816E-4 0.0 0.20762201444896278 6.423664535437522E-4 86-87 7.647219685044669E-5 9.023719228352709E-4 0.0 0.2188787218253485 6.576608929138415E-4 88-89 7.647219685044669E-5 9.023719228352709E-4 0.0 0.2314889870859872 6.729553322839309E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 13315 0.0 42.99544 1 GGTATCA 7280 0.0 42.655533 1 TCAACGC 16995 0.0 33.147953 4 CAACGCA 17550 0.0 32.001087 5 ATCAACG 17670 0.0 31.934965 3 TATCAAC 17905 0.0 31.753365 2 AACGCAG 18455 0.0 30.509686 6 GTACATG 25420 0.0 27.504873 1 GTACCTG 6470 0.0 27.236832 1 TACATGG 26135 0.0 26.1522 2 ACATGGG 26240 0.0 25.161558 3 ACGCAGA 22465 0.0 24.916733 7 TACCTGG 6920 0.0 24.572361 2 CGCAGAG 23555 0.0 23.66294 8 GAGTACA 18795 0.0 22.17302 1 CATGGGG 20590 0.0 20.900904 4 TATACCG 525 0.0 20.798191 5 AGTACAT 18780 0.0 20.637852 2 GCAGAGT 26790 0.0 20.503645 9 AGAGTAC 22685 0.0 19.368443 10-11 >>END_MODULE