##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921423_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4454209 Sequences flagged as poor quality 0 Sequence length 98 %GC 49 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.079369872406076 31.0 31.0 34.0 26.0 34.0 2 30.17026771756781 31.0 31.0 34.0 26.0 34.0 3 30.302545973931622 31.0 31.0 34.0 26.0 34.0 4 33.78903257570536 37.0 35.0 37.0 30.0 37.0 5 33.76781960612984 37.0 35.0 37.0 29.0 37.0 6 33.868102058075856 37.0 35.0 37.0 30.0 37.0 7 33.74513140268003 37.0 35.0 37.0 29.0 37.0 8 33.71755164609474 37.0 35.0 37.0 29.0 37.0 9 35.14314528123849 39.0 35.0 39.0 29.0 39.0 10-11 35.00532058554055 39.0 35.0 39.0 28.0 39.0 12-13 34.83170973791306 39.0 35.0 39.0 27.0 39.0 14-15 35.80532783710868 39.5 36.0 41.0 27.0 41.0 16-17 35.653877265301205 39.0 36.0 41.0 27.0 41.0 18-19 35.46946101990275 39.0 36.0 41.0 27.0 41.0 20-21 35.34677941695147 39.0 36.0 40.0 26.0 41.0 22-23 35.37631597439635 39.0 36.0 41.0 26.5 41.0 24-25 35.233337389422005 39.0 35.5 41.0 25.0 41.0 26-27 34.947431407013006 39.0 35.0 40.0 24.0 41.0 28-29 34.70373145939043 39.0 34.5 40.0 23.5 41.0 30-31 34.43563032179227 38.5 34.0 40.0 22.0 41.0 32-33 34.15060126276069 38.0 34.0 40.0 19.5 41.0 34-35 33.71342588549392 38.0 33.0 40.0 16.5 41.0 36-37 33.31158551383646 38.0 33.0 40.0 14.0 41.0 38-39 33.064600807910004 38.0 32.5 40.0 9.0 41.0 40-41 32.7870632024676 38.0 32.0 40.0 9.0 41.0 42-43 32.47761735024109 38.0 31.0 40.0 8.0 41.0 44-45 32.14753012263232 37.0 31.0 40.0 7.5 41.0 46-47 31.832168741969674 37.0 30.5 40.0 3.5 41.0 48-49 31.592294613925837 37.0 30.0 40.0 2.0 41.0 50-51 30.858239364160955 36.0 29.5 39.0 2.0 40.0 52-53 31.390238087166544 36.5 30.5 39.0 2.0 40.0 54-55 31.81124482483871 37.0 31.0 40.0 2.0 40.5 56-57 31.6458948154431 37.0 31.0 40.0 2.0 41.0 58-59 31.30129064442194 36.0 30.5 39.0 2.0 41.0 60-61 30.83145582077536 35.5 30.0 39.0 2.0 40.0 62-63 30.34327284597557 35.0 29.0 39.0 2.0 40.0 64-65 29.790197092233434 35.0 28.5 38.0 2.0 40.0 66-67 29.287580578280004 34.5 28.0 37.5 2.0 40.0 68-69 28.755038212171904 34.0 26.5 37.0 2.0 39.0 70-71 28.22121728010518 34.0 26.0 36.0 2.0 39.0 72-73 27.655198487542904 33.5 26.0 36.0 2.0 39.0 74-75 27.05245690087735 33.0 24.5 35.0 2.0 37.5 76-77 26.45470362975783 33.0 23.5 35.0 2.0 37.0 78-79 25.874335039060806 32.0 21.0 35.0 2.0 36.5 80-81 25.274221752953217 32.0 19.0 35.0 2.0 36.0 82-83 24.629445430153815 31.0 16.0 34.0 2.0 35.5 84-85 23.990895128630022 31.0 7.5 34.0 2.0 35.0 86-87 23.357624776924474 30.5 3.5 34.0 2.0 35.0 88-89 22.681202992495415 30.0 2.0 34.0 2.0 35.0 90-91 21.919912716264548 29.0 2.0 34.0 2.0 35.0 92-93 21.085377111850836 29.0 2.0 34.0 2.0 35.0 94-95 20.16736686581164 28.0 2.0 33.5 2.0 34.5 96-97 19.27396637652162 26.5 2.0 33.0 2.0 34.0 98 18.65687869608274 25.0 2.0 33.0 2.0 34.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 168609.0 3 28249.0 4 21185.0 5 18066.0 6 16361.0 7 17705.0 8 19926.0 9 22818.0 10 25451.0 11 27779.0 12 30177.0 13 33819.0 14 29777.0 15 29771.0 16 33395.0 17 37849.0 18 42147.0 19 40709.0 20 42608.0 21 46277.0 22 50023.0 23 55366.0 24 61388.0 25 68751.0 26 77351.0 27 87867.0 28 100786.0 29 116722.0 30 137880.0 31 164835.0 32 204392.0 33 258387.0 34 344218.0 35 470250.0 36 618306.0 37 629470.0 38 263894.0 39 11645.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.70093725673923 16.68369327562106 12.841348922473927 24.77402054516578 2 16.248809523809523 18.402380952380952 38.7702380952381 26.57857142857143 3 20.998269163593804 21.67263267967396 27.308487612894677 30.020610543837563 4 13.859460314272692 14.157972873072747 34.478279162367784 37.50428765028678 5 15.59476551530469 35.549205279415894 32.69537770289245 16.16065150238697 6 35.7849269987642 32.75760705204227 16.295772777910948 15.161693171282595 7 31.92801771324329 29.788453599541086 18.73128760167304 19.552241085542583 8 28.362785437959715 33.47929146086571 18.280110263506067 19.877812837668515 9 26.93030606968338 16.628574392426543 18.637484369593633 37.80363516829645 10-11 27.141644624276417 24.669240649011797 25.684096247030453 22.505018479681333 12-13 27.31483835955144 21.618177170357253 26.298592640966888 24.768391829124415 14-15 24.026423982773217 23.35295821516864 23.972904639690313 28.64771316236783 16-17 24.566332516388485 26.500369926699502 24.510175510291145 24.42312204662087 18-19 24.517209144770487 25.83137876336849 25.935090868269338 23.716321223591684 20-21 25.025474591356094 24.890782253641323 26.005013354640237 24.07872980036234 22-23 24.69298011518618 24.66275371495381 25.889619703567785 24.754646466292225 24-25 24.547433620564735 24.87602544530977 25.989993518477956 24.586547415647537 26-27 24.5883864235491 24.94990351455101 26.124019528978444 24.337690532921446 28-29 24.47917205017709 25.297810178957995 25.915900841243257 24.307116929621657 30-31 24.71151449680439 25.065124677830386 25.75371151415985 24.469649311205377 32-33 24.461639298020877 25.132493860259725 25.81992243675739 24.58594440496201 34-35 24.802155095078255 25.039997241103233 25.908305902145717 24.249541761672795 36-37 24.763324112877 24.981291950506606 25.876341515401148 24.37904242121525 38-39 24.65116872434209 25.13831830545554 25.848043877105535 24.362469093096824 40-41 24.818729632519197 25.10715240844702 25.784357210292818 24.289760748740967 42-43 24.67017324672408 25.00249139860854 25.720849366597875 24.6064859880695 44-45 24.722148529216113 24.996583666211947 25.69779252365113 24.583475280920812 46-47 24.917561924886883 25.113833653419672 25.61817132067799 24.350433101015454 48-49 24.819024934643192 25.16186330420012 25.491388876729363 24.527722884427323 50-51 24.502919172841978 25.410580966284463 25.595936199074703 24.49056366179886 52-53 24.73248913813242 25.39014694534572 25.418040598478093 24.459323318043772 54-55 24.581465997679096 25.14993909861892 25.61857886692159 24.650016036780393 56-57 24.648774842149546 25.273304269951808 25.59199562334002 24.485925264558624 58-59 24.905019301882984 25.152084757926286 25.51027833589417 24.432617604296563 60-61 24.7954800821713 25.132993518054015 25.675698242768206 24.395828157006484 62-63 24.51575619133084 25.295141525967512 25.650561732071736 24.538540550629918 64-65 24.589828285513214 25.272972815870396 25.55137749138944 24.58582140722694 66-67 24.66318932863667 25.256481904858674 25.47094785686464 24.609380909640016 68-69 24.572637009895058 25.222674052177425 25.534359608621344 24.670329329306174 70-71 24.650302346258396 25.0622169081335 25.615173380039767 24.672307365568336 72-73 24.804501869952695 25.047228090022966 25.53953694819931 24.60873309182503 74-75 24.489410276973608 25.421344688327878 25.472283866745904 24.616961167952606 76-77 24.713356231231103 25.086030624726053 25.406844764183568 24.793768379859277 78-79 24.623843346267762 25.077794311805757 25.581381188575982 24.7169811533505 80-81 24.697377950210516 25.16303880266563 25.48251468812201 24.657068559001843 82-83 24.830413303220674 25.12510789830234 25.448458838954497 24.59601995952249 84-85 24.75239376370047 25.19358223755858 25.384571503558234 24.66945249518271 86-87 24.654253319189557 25.212142557814605 25.497727641955155 24.635876481040683 88-89 24.629651975140597 25.07864137121411 25.411859301469303 24.879847352175986 90-91 24.7143567487848 24.990737326825222 25.395149132984475 24.8997567914055 92-93 24.85704769842172 25.168985653131582 25.458858961245596 24.515107687201105 94-95 24.82748682323738 24.97538183942566 25.43119978196874 24.765931555368226 96-97 24.676010563581173 24.978492409822028 25.539211916794773 24.806285109802026 98 24.739599775588584 25.09524857533026 25.307348030717662 24.85780361836349 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 647.0 1 477.5 2 571.0 3 849.5 4 659.5 5 532.0 6 870.5 7 1723.0 8 2605.5 9 2597.0 10 1979.5 11 1636.5 12 1810.0 13 2158.0 14 2528.5 15 2885.5 16 3146.0 17 3322.5 18 3509.5 19 3544.5 20 3432.5 21 3341.0 22 3300.5 23 3562.0 24 4031.0 25 4788.5 26 6125.0 27 8083.0 28 10472.0 29 13610.0 30 17669.0 31 22774.5 32 29034.0 33 35884.5 34 43699.0 35 52825.5 36 62889.0 37 73882.0 38 84774.0 39 95357.5 40 106450.5 41 118166.5 42 130570.0 43 143878.0 44 156307.0 45 168537.5 46 184732.5 47 200415.0 48 206845.5 49 204124.0 50 201241.0 51 201108.0 52 200939.5 53 200819.0 54 198432.0 55 191647.5 56 181281.0 57 169904.0 58 156547.5 59 140052.5 60 122190.5 61 102746.5 62 83215.0 63 64168.0 64 47452.5 65 35932.5 66 27760.5 67 21442.5 68 16806.0 69 13192.5 70 10086.0 71 7712.0 72 6090.0 73 4811.5 74 3853.5 75 3021.0 76 2117.0 77 1328.5 78 808.5 79 520.5 80 340.0 81 207.5 82 114.5 83 71.0 84 45.0 85 27.5 86 25.5 87 18.5 88 11.5 89 10.5 90 10.5 91 10.0 92 9.5 93 8.5 94 6.0 95 6.0 96 5.5 97 3.0 98 1.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.4703865489922004 2 0.049593541748939034 3 0.05846155849444873 4 0.05545316800356696 5 0.06643154822775492 6 0.06389462191827999 7 0.04371146481900602 8 0.019689242242562036 9 0.012347871417798311 10-11 0.015019501779103765 12-13 0.011505971093857517 14-15 0.015244008532154643 16-17 0.014009221390374813 18-19 0.05528478793877881 20-21 0.08297769592760465 22-23 0.10005143449712396 24-25 0.06946238939394177 26-27 0.08524521413341853 28-29 0.0873555776120968 30-31 0.05737270074215198 32-33 0.03267695790655535 34-35 0.39632177116071565 36-37 0.6205029894196703 38-39 0.5698991672820022 40-41 0.5639721890014591 42-43 0.5380641096993877 44-45 0.5228650025178433 46-47 0.5130540574095199 48-49 0.5025134653537812 50-51 0.5160961239133592 52-53 0.5989503411267859 54-55 0.5686194787896123 56-57 0.5260866744241233 58-59 0.502614493392654 60-61 0.5158716171603084 62-63 0.5284439953311576 64-65 0.5461463528092193 66-67 0.573255543240113 68-69 0.5267265186703184 70-71 0.4743715438588535 72-73 0.4581509309509275 74-75 0.4379789991893061 76-77 0.4529985009684098 78-79 0.44720622673969723 80-81 0.44359166801557803 82-83 0.46329213559579263 84-85 0.42977327736529647 86-87 0.4328153438691359 88-89 0.4596551261963684 90-91 0.4432661332236543 92-93 0.43808002722817896 94-95 0.4486206192839177 96-97 0.4429069224187729 98 0.4377208164232976 >>END_MODULE >>Sequence Length Distribution pass #Length Count 98 4454209.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.256120802720865 #Duplication Level Percentage of deduplicated Percentage of total 1 75.70976867408987 43.34847661149741 2 13.469020033695726 15.423676762870997 3 4.684961752161452 8.047282081136487 4 2.0407945144877626 4.673919090201656 5 1.1218684912747707 3.2116918930597227 6 0.6669804450619866 2.2913227761312984 7 0.45205268715375363 1.8117948285408931 8 0.3140120456307162 1.4383289294513428 9 0.21761074184826673 1.121359223091066 >10 1.225741719677298 12.468710939035063 >50 0.07020906200181763 2.737616832434257 >100 0.0258001996639515 2.392372050300767 >500 5.898168753516486E-4 0.2288522340477166 >1k 5.111741936220477E-4 0.5300182747822237 >5k 7.864218363398501E-5 0.27457747341924266 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAGTAAGCAGTGGTATCAACGCAGAGTAAGCAGTGGTATCAACGCAGAGT 6722 0.15091343940080046 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5474 0.12289499662005082 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 4.490135061017568E-5 2 0.0 0.0 0.0 0.0 4.490135061017568E-5 3 0.0 0.0 0.0 0.0 4.490135061017568E-5 4 0.0 0.0 0.0 0.0 4.490135061017568E-5 5 0.0 0.0 0.0 0.0 4.490135061017568E-5 6 0.0 0.0 0.0 0.0 6.735202591526352E-5 7 0.0 0.0 0.0 0.0 6.735202591526352E-5 8 0.0 0.0 0.0 0.0 6.735202591526352E-5 9 0.0 0.0 0.0 4.490135061017568E-5 6.735202591526352E-5 10-11 1.122533765254392E-5 0.0 0.0 6.735202591526352E-5 6.735202591526352E-5 12-13 2.245067530508784E-5 3.367601295763176E-5 0.0 7.857736356780744E-5 1.5715472713561488E-4 14-15 2.245067530508784E-5 6.735202591526352E-5 0.0 8.980270122035136E-5 2.245067530508784E-4 16-17 2.245067530508784E-5 6.735202591526352E-5 0.0 1.2347871417798314E-4 2.918587789661419E-4 18-19 2.245067530508784E-5 6.735202591526352E-5 0.0 2.132814153983345E-4 3.367601295763176E-4 20-21 6.735202591526352E-5 6.735202591526352E-5 0.0 2.4695742835596627E-4 4.714641814068446E-4 22-23 6.735202591526352E-5 6.735202591526352E-5 0.0 3.2553479192377367E-4 5.163655320170202E-4 24-25 7.857736356780744E-5 6.735202591526352E-5 0.0 3.928868178390372E-4 5.388162073221082E-4 26-27 8.980270122035136E-5 6.735202591526352E-5 0.0 4.490135061017568E-4 5.50041544974652E-4 28-29 8.980270122035136E-5 6.735202591526352E-5 0.0 7.633229603729865E-4 5.61266882627196E-4 30-31 8.980270122035136E-5 6.735202591526352E-5 0.0 0.0020205607774579056 5.61266882627196E-4 32-33 8.980270122035136E-5 6.735202591526352E-5 0.0 0.00524223268373801 5.61266882627196E-4 34-35 8.980270122035136E-5 6.735202591526352E-5 0.0 0.009406832952831803 6.061682332373716E-4 36-37 8.980270122035136E-5 6.735202591526352E-5 0.0 0.01517665650623938 6.061682332373716E-4 38-39 8.980270122035136E-5 6.735202591526352E-5 0.0 0.02506617897813057 6.286189085424594E-4 40-41 8.980270122035136E-5 8.980270122035136E-5 0.0 0.03557309502091168 6.510695838475473E-4 42-43 8.980270122035136E-5 8.980270122035136E-5 0.0 0.04540649080454015 6.735202591526352E-4 44-45 8.980270122035136E-5 8.980270122035136E-5 0.0 0.055408266652956784 7.408722850678987E-4 46-47 8.980270122035136E-5 8.980270122035136E-5 0.0 0.06621826681235658 8.082243109831621E-4 48-49 8.980270122035136E-5 8.980270122035136E-5 0.0 0.07836408215240911 9.541537004662331E-4 50-51 8.980270122035136E-5 1.0102803887289528E-4 0.0 0.09076808025847014 0.0010102803887289528 52-53 8.980270122035136E-5 1.122533765254392E-4 0.0 0.10276796620903958 0.0010664070769916723 54-55 8.980270122035136E-5 1.122533765254392E-4 0.0 0.11601386463904141 0.0011337591029069358 56-57 8.980270122035136E-5 1.122533765254392E-4 0.0 0.12937201644556867 0.0011674351158645676 58-59 8.980270122035136E-5 1.122533765254392E-4 0.0 0.14357206857603672 0.0011674351158645676 60-61 1.122533765254392E-4 1.122533765254392E-4 0.0 0.15718840314857252 0.0011674351158645676 62-63 1.122533765254392E-4 1.122533765254392E-4 0.0 0.17145580730495585 0.001257237817084919 64-65 1.122533765254392E-4 1.122533765254392E-4 0.0 0.18654266110997486 0.001257237817084919 66-67 1.122533765254392E-4 1.122533765254392E-4 0.0 0.20233671118710414 0.001268463154737463 68-69 1.122533765254392E-4 1.122533765254392E-4 0.0 0.21843384538085214 0.0012796884923900068 70-71 1.3470405183052704E-4 1.122533765254392E-4 0.0 0.23434014883450688 0.0013470405183052705 72-73 1.3470405183052704E-4 1.122533765254392E-4 0.0 0.24999949485980566 0.001526645920745973 74-75 1.3470405183052704E-4 1.122533765254392E-4 0.0 0.2656588408851044 0.0016501246349239563 76-77 1.3470405183052704E-4 1.122533765254392E-4 0.0 0.2831815929607254 0.001683800647881588 78-79 1.3470405183052704E-4 1.2347871417798314E-4 0.0 0.3018044281262958 0.001695025985534132 80-81 1.3470405183052704E-4 1.3470405183052704E-4 0.0 0.3209211781485781 0.0017174766608392196 82-83 1.3470405183052704E-4 1.5715472713561488E-4 0.0 0.33940930926231794 0.0017960540244070272 84-85 1.3470405183052704E-4 1.5715472713561488E-4 0.0 0.35779641233718484 0.001818504699712115 86 1.3470405183052704E-4 1.5715472713561488E-4 0.0 0.37203014048061056 0.001818504699712115 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTACCTG 4975 0.0 29.421854 1 TACCTGG 5300 0.0 26.642797 2 GTACATG 12720 0.0 25.222124 1 TACATGG 13195 0.0 23.765762 2 ACATGGG 13560 0.0 22.212927 3 CGTATAC 300 1.0913936E-11 21.394735 3 GTATAGG 1100 0.0 21.340939 1 ACCTGGG 6650 0.0 20.475521 3 GTATCAA 15315 0.0 20.197065 1 GAGTACA 10165 0.0 19.697807 1 AGTACAT 9350 0.0 19.613424 2 CATGGGG 10815 0.0 17.761827 4 TCAACGC 17155 0.0 17.638163 4 CAACGCA 17345 0.0 17.497816 5 AGAGTAC 12535 0.0 17.451668 10-11 TATCAAC 17450 0.0 17.313904 2 GTGTAGC 2510 0.0 17.23813 1 ATCAACG 17605 0.0 17.161274 3 AACGCAG 18115 0.0 16.799002 6 GTATATA 1205 0.0 16.425455 1 >>END_MODULE