##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921423_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4454209 Sequences flagged as poor quality 0 Sequence length 101 %GC 49 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.773791261254242 33.0 31.0 34.0 30.0 34.0 2 31.887928698451287 34.0 31.0 34.0 30.0 34.0 3 32.01519820915453 34.0 31.0 34.0 30.0 34.0 4 35.569572734463065 37.0 35.0 37.0 33.0 37.0 5 35.3481612560165 37.0 35.0 37.0 33.0 37.0 6 35.38606742521512 37.0 35.0 37.0 33.0 37.0 7 35.31208234728096 37.0 35.0 37.0 33.0 37.0 8 35.258977070900805 37.0 35.0 37.0 33.0 37.0 9 36.85361418828798 39.0 37.0 39.0 33.0 39.0 10-11 36.751123824679084 39.0 37.0 39.0 33.0 39.0 12-13 36.62400765208817 39.0 37.0 39.0 32.0 39.0 14-15 37.872677281196275 40.0 38.0 41.0 33.0 41.0 16-17 37.770054795363215 40.0 38.0 41.0 32.5 41.0 18-19 37.65822528758754 40.0 38.0 41.0 32.0 41.0 20-21 37.53408315595429 40.0 38.0 41.0 32.0 41.0 22-23 37.493007400416104 40.0 38.0 41.0 32.0 41.0 24-25 37.54458816368967 40.0 38.0 41.0 32.0 41.0 26-27 37.419434741387306 40.0 37.5 41.0 32.0 41.0 28-29 37.27264448075966 40.0 37.0 41.0 31.5 41.0 30-31 37.11863756280857 40.0 37.0 41.0 31.0 41.0 32-33 36.94001830628064 40.0 37.0 41.0 31.0 41.0 34-35 36.77471600457006 40.0 36.0 41.0 30.0 41.0 36-37 36.65760407740184 40.0 36.0 41.0 30.0 41.0 38-39 36.609805242636796 40.0 36.0 41.0 30.0 41.0 40-41 36.43151275568793 39.0 36.0 41.0 30.0 41.0 42-43 36.17141988622447 39.0 35.0 41.0 30.0 41.0 44-45 35.94276929977916 39.0 35.0 40.0 29.0 41.0 46-47 35.634710899286496 39.0 35.0 40.0 28.0 41.0 48-49 35.2685543044792 38.0 35.0 40.0 27.0 41.0 50-51 34.95932880563081 38.0 34.0 40.0 26.0 41.0 52-53 34.62712279554013 38.0 34.0 40.0 25.5 41.0 54-55 34.27424521390891 38.0 33.5 40.0 24.0 41.0 56-57 33.85859127849636 37.0 33.0 40.0 23.5 41.0 58-59 33.44164070433156 37.0 33.0 39.5 22.5 41.0 60-61 32.975438399949354 36.0 32.0 39.0 21.5 40.0 62-63 32.51139091138292 35.5 31.5 39.0 19.5 40.0 64-65 31.965393967817853 35.0 31.0 38.5 18.0 40.0 66-67 31.406867863631902 35.0 30.5 38.0 14.0 40.0 68-69 30.870924107961706 34.5 30.0 37.0 10.0 39.0 70-71 30.283428999402588 34.0 29.0 36.5 7.5 39.0 72-73 29.705753254955034 34.0 29.0 36.0 7.0 39.0 74-75 29.15681370137773 34.0 28.0 35.5 4.0 37.5 76-77 27.966561851947226 31.5 26.5 34.0 2.0 36.0 78-79 28.892079828315197 33.5 29.0 35.0 2.0 36.5 80-81 28.902876358069413 34.0 29.0 35.0 2.0 36.0 82-83 28.532485790406334 34.0 28.5 35.0 2.0 36.0 84-85 27.993129419836386 33.0 27.0 35.0 2.0 35.5 86-87 27.43155002380894 33.0 26.0 35.0 2.0 35.0 88-89 26.84727681166286 32.5 25.0 34.5 2.0 35.0 90-91 26.30953576718111 32.0 24.5 34.0 2.0 35.0 92-93 25.80433619078045 32.0 23.5 34.0 2.0 35.0 94-95 25.23241466666697 32.0 21.5 34.0 2.0 35.0 96-97 24.37935994920759 31.0 14.0 34.0 2.0 35.0 98-99 23.27798066951955 31.0 2.0 34.0 2.0 35.0 100-101 19.7547345667884 25.5 2.0 32.0 2.0 34.5 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 35666.0 3 17940.0 4 10635.0 5 7946.0 6 7061.0 7 7223.0 8 8693.0 9 10256.0 10 12250.0 11 14315.0 12 16567.0 13 19891.0 14 21910.0 15 25425.0 16 28615.0 17 33364.0 18 34188.0 19 30523.0 20 30683.0 21 32752.0 22 34755.0 23 38108.0 24 43248.0 25 49878.0 26 59004.0 27 70315.0 28 85388.0 29 102902.0 30 125429.0 31 155340.0 32 196825.0 33 259814.0 34 360397.0 35 522537.0 36 761358.0 37 849542.0 38 324930.0 39 8536.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.96511954973963 17.217252383934703 13.222772541450162 24.594855524875502 2 16.436521052334992 18.741666589960193 38.385670721782475 26.43614163592234 3 21.07208930560046 21.839435822825738 27.540683263282684 29.547791608291124 4 14.195947416742689 14.573772484118386 34.32196698169686 36.90831311744206 5 15.5787921036148 35.65458590675297 32.718137304425724 16.048484685206514 6 35.93507269870917 32.84576227664756 16.093394381932356 15.12577064271091 7 32.04389775703185 29.817735247438264 18.609320207563073 19.529046787966806 8 28.368495785405134 33.62472688175716 18.21663282794753 19.79014450489017 9 26.797771013376348 16.709152660595482 18.654976726334322 37.83809959969385 10-11 27.166946728667956 24.763256314878454 25.632150780662293 22.437646175791297 12-13 27.284156474547324 21.64349960954398 26.35294976881633 24.719394147092366 14-15 23.97237170084147 23.370705515494276 24.05821168643671 28.598711097227543 16-17 24.519811620240436 26.556733181714105 24.640516336348536 24.28293886169692 18-19 24.463302334528585 25.92481252316825 26.00046693042209 23.611418211881077 20-21 24.974850972573158 24.893792448633274 26.10540347865592 24.025953100137652 22-23 24.60481267141929 24.637761559877195 26.096530360761133 24.66089540794239 24-25 24.49572037051531 24.869608943051727 26.164171175297664 24.4704995111353 26-27 24.49485071312155 24.991747577829884 26.269166390837405 24.244235318211153 28-29 24.411150531547115 25.347783234859595 26.0501314467814 24.19093478681189 30-31 24.62442943864767 25.065039026783786 25.915611982021332 24.39491955254721 32-33 24.38674303193495 25.116803767985886 25.96001140112994 24.536441798949223 34-35 24.703816316046616 25.06267647756175 26.089400928280952 24.144106278110673 36-37 24.614348837890727 25.051667325851447 26.03430357923302 24.299680257024807 38-39 24.520812811227767 25.20333865420494 26.03894527735408 24.23690325721321 40-41 24.687334533635788 25.133304979967765 25.919875095490514 24.259485390905937 42-43 24.551535917707504 25.102179167405225 25.84566879210411 24.50061612278316 44-45 24.597511273456572 24.995155607718065 25.866641009537673 24.540692109287694 46-47 24.697428207128514 25.247139221199877 25.78014299065966 24.275289581011947 48-49 24.675820498503512 25.271463919349653 25.661577188252327 24.39113839389451 50-51 24.41042142913354 25.445979073753776 25.705325951156528 24.43827354595616 52-53 24.654197623648784 25.469817398474103 25.496882365058244 24.37910261281887 54-55 24.58238409998309 25.165181757746296 25.653357305614932 24.59907683665568 56-57 24.632279809055365 25.357785448172525 25.578460220391886 24.431474522380224 58-59 24.863602151473092 25.252890136911414 25.499614685830036 24.38389302578546 60-61 24.762732164260527 25.239720695094313 25.717899171427476 24.27964796921768 62-63 24.50360531556419 25.36425329561971 25.674274732388426 24.457866656427672 64-65 24.563533506371858 25.358192774614462 25.57395769099208 24.5043160280216 66-67 24.662640027633824 25.344670449099095 25.469195604999783 24.5234939182673 68-69 24.56617675964978 25.292467188210782 25.583861710312757 24.557494341826676 70-71 24.646817390695176 25.163457504416854 25.639894913880777 24.549830191007192 72-73 24.812063001844674 25.13836169512278 25.552851652278036 24.49672365075451 74-75 24.49893636603878 25.521801716526976 25.431223522163133 24.54803839527111 76-77 24.70395642366457 25.230308656326894 25.452187232777728 24.613547687230806 78-79 24.57326662013773 25.211865620563138 25.63698419240558 24.57788356689355 80-81 24.63475495220497 25.29508637780938 25.553128349043426 24.51703032094223 82-83 24.756204723132775 25.262265891971268 25.5155434998144 24.465985885081558 84-85 24.625573090955225 25.380472888805055 25.477646435370048 24.51630758486967 86-87 24.56503816704674 25.371140309355138 25.531756124686062 24.532065398912057 88-89 24.540080052011014 25.28689215454637 25.46379008383188 24.709237709610733 90-91 24.613282247535327 25.197180420028126 25.47706354373105 24.712473788705495 92-93 24.81029575186245 25.38655957180022 25.472630781575774 24.33051389476155 94-95 24.711209682797104 25.22400348283963 25.453670621533746 24.611116212829522 96-97 24.53472931098413 25.215789302930585 25.666547558627595 24.582933827457694 98-99 24.59407350460128 25.286409556684887 25.47249942857297 24.647017510140863 100-101 25.14485470410551 24.60602989384825 25.59730498907745 24.651810412968796 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 295.0 1 246.5 2 452.0 3 663.0 4 458.5 5 346.0 6 679.5 7 1500.0 8 2216.5 9 2208.0 10 1606.5 11 1091.0 12 1017.0 13 1098.5 14 1220.0 15 1287.5 16 1365.5 17 1537.5 18 1782.5 19 1959.0 20 2076.0 21 2249.5 22 2508.0 23 2902.0 24 3439.0 25 4254.0 26 5320.5 27 6817.5 28 8818.5 29 11488.0 30 15368.5 31 19888.0 32 24902.0 33 31010.0 34 37763.0 35 45673.5 36 55487.0 37 66219.0 38 76370.5 39 86377.5 40 97628.5 41 108887.5 42 120456.5 43 132829.0 44 145437.5 45 158111.5 46 169382.5 47 183433.5 48 202539.5 49 208962.0 50 201771.0 51 198219.0 52 198206.0 53 198387.5 54 196270.0 55 189979.5 56 179834.5 57 167394.0 58 154887.0 59 139279.5 60 120547.0 61 101726.0 62 82682.0 63 63637.5 64 47166.0 65 35432.5 66 27204.5 67 21411.0 68 16841.5 69 13023.0 70 9997.5 71 7795.5 72 6130.5 73 4838.0 74 3748.0 75 2886.0 76 2137.5 77 1362.5 78 855.0 79 474.5 80 260.5 81 156.5 82 88.5 83 39.0 84 18.5 85 14.0 86 9.5 87 7.0 88 5.5 89 2.0 90 0.5 91 0.0 92 0.0 93 0.0 94 0.0 95 0.5 96 0.5 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.30883148949678835 2 0.0 3 0.006488245163170385 4 0.060122908467025234 5 4.2656283079666894E-4 6 0.06492735298231403 7 0.07455869268819672 8 0.10486710435006528 9 0.09238452888043647 10-11 0.09657157982483534 12-13 0.0961786930069963 14-15 0.06518553574832255 16-17 0.03608946055292871 18-19 0.03873864023892906 20-21 0.02814192149492761 22-23 0.04172458005450575 24-25 0.03469751868401326 26-27 0.021799605721240293 28-29 0.024156926628274514 30-31 0.0034237279840258956 32-33 0.005938203618195734 34-35 0.008643509992458819 36-37 0.010675296107569267 38-39 0.015221557856849555 40-41 0.019913748995612914 42-43 0.0032665732568902804 44-45 0.013605109234883232 46-47 0.02359565974564732 48-49 0.002649179686000365 50-51 0.007375046837721355 52-53 0.002503250296517294 54-55 0.0039513188536954595 56-57 0.003210446568627561 58-59 0.0011562097782120237 60-61 0.005017725930687132 62-63 0.014503136247086745 64-65 0.006454569150212755 66-67 0.03805389464212389 68-69 0.06025761251885576 70-71 0.011865181898738923 72-73 0.031139086648156834 74-75 0.05061504747532053 76-77 0.2978418839349478 78-79 0.07219014644350995 80-81 0.03244122581585193 82-83 0.026716303613054528 84-85 0.018779989892705976 86-87 0.11411678257576148 88-89 0.5127734239682062 90-91 0.12897912962772962 92-93 0.046731080647540335 94-95 0.008351651213492677 96-97 0.006050456994721173 98-99 0.010035451861374264 100-101 0.007846511019128201 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4454209.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.71193874429916 #Duplication Level Percentage of deduplicated Percentage of total 1 71.5630544134229 37.72227340595296 2 15.535463501404308 16.378088009006387 3 5.443947223208009 8.608830376708141 4 2.5213674125479577 5.316246584084 5 1.346271471899762 3.548228967998886 6 0.8036256325629111 2.54163990702029 7 0.5508178531978789 2.0324273855923067 8 0.3686983256719875 1.5547842846357975 9 0.2766381406583988 1.31239194522501 >10 1.4678135145874602 13.828982816226528 >50 0.08711029388303791 3.1429187795310765 >100 0.033915223803275066 2.932952254332586 >500 6.384968253712778E-4 0.24266262931845636 >1k 5.5336348318421E-4 0.5558014471681796 >5k 8.513284356675087E-5 0.2817712071993743 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAGTAAGCAGTGGTATCAACGCAGAGTAAGCAGTGGTATCAACGCAGAGT 6915 0.15524641973468242 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5643 0.12668916074661069 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 6.735202591526352E-5 2 0.0 0.0 0.0 0.0 6.735202591526352E-5 3 0.0 0.0 0.0 0.0 6.735202591526352E-5 4 0.0 0.0 0.0 2.245067530508784E-5 8.980270122035136E-5 5 0.0 0.0 0.0 2.245067530508784E-5 1.122533765254392E-4 6 0.0 0.0 0.0 2.245067530508784E-5 1.122533765254392E-4 7 0.0 0.0 0.0 2.245067530508784E-5 1.122533765254392E-4 8 0.0 0.0 0.0 2.245067530508784E-5 1.122533765254392E-4 9 0.0 0.0 0.0 4.490135061017568E-5 1.122533765254392E-4 10-11 0.0 0.0 0.0 6.735202591526352E-5 1.122533765254392E-4 12-13 4.490135061017568E-5 0.0 0.0 7.857736356780744E-5 2.1328141539833447E-4 14-15 4.490135061017568E-5 0.0 0.0 8.980270122035136E-5 2.469574283559662E-4 16-17 4.490135061017568E-5 0.0 0.0 1.122533765254392E-4 2.80633441313598E-4 18-19 4.490135061017568E-5 0.0 0.0 1.6838006478815882E-4 3.8166148018649326E-4 20-21 4.490135061017568E-5 0.0 0.0 1.9083074009324663E-4 4.8268951905938853E-4 22-23 4.490135061017568E-5 0.0 0.0 2.581827660085101E-4 5.949428955848276E-4 24-25 4.490135061017568E-5 1.122533765254392E-5 0.0 3.479854672288615E-4 6.061682332373716E-4 26-27 4.490135061017568E-5 2.245067530508784E-5 0.0 4.041121554915811E-4 7.071962721102669E-4 28-29 4.490135061017568E-5 2.245067530508784E-5 0.0 7.071962721102669E-4 7.633229603729865E-4 30-31 4.490135061017568E-5 2.245067530508784E-5 0.0 0.0019981101021528174 7.633229603729865E-4 32-33 4.490135061017568E-5 2.245067530508784E-5 0.0 0.005219782008432922 7.857736356780743E-4 34-35 4.490135061017568E-5 2.245067530508784E-5 0.0 0.009384382277526717 7.857736356780743E-4 36-37 4.490135061017568E-5 2.245067530508784E-5 0.0 0.015086853805019028 7.969989733306183E-4 38-39 4.490135061017568E-5 3.367601295763176E-5 0.0 0.024897798913342414 8.980270122035136E-4 40-41 6.735202591526352E-5 4.490135061017568E-5 0.0 0.03523633489133536 9.317030251611454E-4 42-43 6.735202591526352E-5 4.490135061017568E-5 0.0 0.04491257594782822 9.990550510764087E-4 44-45 6.735202591526352E-5 4.490135061017568E-5 0.0 0.05455514099136345 0.0010215057263814969 46-47 6.735202591526352E-5 4.490135061017568E-5 0.0 0.06520798642362763 0.0010664070769916723 48-49 6.735202591526352E-5 4.490135061017568E-5 0.0 0.07684866156931568 0.0011786604535171117 50-51 6.735202591526352E-5 4.490135061017568E-5 0.0 0.0889158995458004 0.0012123364664747432 52-53 6.735202591526352E-5 4.490135061017568E-5 0.0 0.10053412401618333 0.001380716531262902 54-55 6.735202591526352E-5 4.490135061017568E-5 0.0 0.1132524315765156 0.0014592938948307095 56-57 6.735202591526352E-5 4.490135061017568E-5 0.0 0.12617279521459365 0.0014929699077883413 58-59 6.735202591526352E-5 4.490135061017568E-5 0.0 0.14000241120252777 0.001526645920745973 60-61 6.735202591526352E-5 4.490135061017568E-5 0.0 0.15342791503497027 0.0015603219337036048 62-63 6.735202591526352E-5 4.490135061017568E-5 0.0 0.16711160163342134 0.0015715472713561487 64-65 6.735202591526352E-5 4.490135061017568E-5 0.0 0.18134532977684703 0.0015715472713561487 66-67 7.857736356780744E-5 4.490135061017568E-5 0.0 0.19647708493247623 0.0016164486219663243 68-69 8.980270122035136E-5 4.490135061017568E-5 0.0 0.21155271339984272 0.0016613499725765001 70-71 8.980270122035136E-5 4.490135061017568E-5 0.0 0.22685284862026006 0.0017174766608392196 72-73 8.980270122035136E-5 4.490135061017568E-5 0.0 0.24160294229570278 0.0018746313879748346 74-75 8.980270122035136E-5 4.490135061017568E-5 0.0 0.2566561200877642 0.001964434089195186 76-77 8.980270122035136E-5 4.490135061017568E-5 0.0 0.2734379998783173 0.001998110102152818 78-79 8.980270122035136E-5 4.490135061017568E-5 0.0 0.2910954560057689 0.0020093354398053615 80-81 8.980270122035136E-5 4.490135061017568E-5 0.0 0.3091233482757545 0.002065462128068081 82-83 8.980270122035136E-5 4.490135061017568E-5 0.0 0.3265899736631128 0.0021440394916358886 84-85 8.980270122035136E-5 4.490135061017568E-5 0.0 0.34415762708934405 0.0021552648292884327 86-87 8.980270122035136E-5 4.490135061017568E-5 0.0 0.3623763500994228 0.0022787435434664157 88-89 1.122533765254392E-4 4.490135061017568E-5 0.0 0.38068487581072197 0.0024022222576443987 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTACCTG 5145 0.0 29.805769 1 TACCTGG 5410 0.0 28.007168 2 GTACATG 13130 0.0 26.333082 1 TACATGG 13560 0.0 24.659756 2 ACATGGG 13985 0.0 23.163675 3 TATAACG 350 0.0 21.713396 2 ACCTGGG 6870 0.0 21.502512 3 GTATCAA 16645 0.0 20.142746 1 GAGTACA 10425 0.0 19.506603 1 CATGGGG 10920 0.0 19.487476 4 AGTACAT 9960 0.0 18.741701 2 AGAGTAC 13430 0.0 18.207312 10-11 GTATAGG 1040 0.0 17.859163 1 TCAACGC 18600 0.0 17.748924 4 CAACGCA 18725 0.0 17.647076 5 TATCAAC 19180 0.0 17.285524 2 GTGTAGC 2765 0.0 17.051786 1 ATCAACG 19435 0.0 17.010231 3 AACGCAG 19585 0.0 16.970093 6 TACACGG 1075 0.0 16.790009 2 >>END_MODULE