##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921422_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 6984007 Sequences flagged as poor quality 0 Sequence length 98 %GC 50 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.363499349299047 31.0 31.0 34.0 27.0 34.0 2 30.48159158488816 31.0 31.0 34.0 27.0 34.0 3 30.603879978929 31.0 31.0 34.0 27.0 34.0 4 34.12310039208151 37.0 35.0 37.0 30.0 37.0 5 34.10362690071759 37.0 35.0 37.0 30.0 37.0 6 34.198342011971064 37.0 35.0 37.0 30.0 37.0 7 34.082732878131424 37.0 35.0 37.0 30.0 37.0 8 34.0668544576201 37.0 35.0 37.0 30.0 37.0 9 35.514958246748606 39.0 37.0 39.0 30.0 39.0 10-11 35.3826367155703 39.0 35.0 39.0 30.0 39.0 12-13 35.225434123992144 39.0 35.0 39.0 30.0 39.0 14-15 36.218232957097555 40.0 36.0 41.0 29.0 41.0 16-17 36.060193095453656 39.5 36.0 41.0 28.5 41.0 18-19 35.87392516931899 39.0 36.0 41.0 27.0 41.0 20-21 35.75107048145857 39.0 36.0 40.0 27.0 41.0 22-23 35.78804130637326 39.0 36.0 41.0 27.0 41.0 24-25 35.64111712660082 39.0 36.0 41.0 27.0 41.0 26-27 35.36041294059413 39.0 35.5 40.0 26.5 41.0 28-29 35.11932498063075 39.0 35.0 40.0 25.0 41.0 30-31 34.86355841281373 38.5 34.5 40.0 24.5 41.0 32-33 34.5832490574537 38.0 34.0 40.0 24.0 41.0 34-35 34.14417396775232 38.0 33.5 40.0 21.0 41.0 36-37 33.75078661862739 38.0 33.0 40.0 18.0 41.0 38-39 33.50713888173365 38.0 33.0 40.0 16.0 41.0 40-41 33.235291860389026 38.0 32.5 40.0 15.0 41.0 42-43 32.93027927950244 38.0 32.0 40.0 13.0 41.0 44-45 32.60142436856091 37.0 31.5 40.0 9.0 41.0 46-47 32.29411955056746 37.0 31.0 40.0 8.5 41.0 48-49 32.06921112765208 37.0 31.0 40.0 8.0 41.0 50-51 31.331259762483057 36.0 30.5 38.5 7.0 39.5 52-53 31.88309383137789 36.5 31.0 39.0 7.0 40.0 54-55 32.30357186068113 37.0 32.0 39.5 4.0 40.5 56-57 32.128794114897076 37.0 31.5 40.0 2.0 41.0 58-59 31.77691073333689 36.0 31.0 39.0 2.0 41.0 60-61 31.291334544767782 35.5 30.5 39.0 2.0 40.0 62-63 30.78465993805562 35.0 30.0 39.0 2.0 40.0 64-65 30.219947588826873 35.0 29.0 38.0 2.0 40.0 66-67 29.70231995758309 34.5 28.5 37.5 2.0 40.0 68-69 29.16052625663176 34.0 28.0 37.0 2.0 39.0 70-71 28.614312313833594 34.0 27.0 36.0 2.0 39.0 72-73 28.03981024074002 33.5 26.0 35.5 2.0 38.5 74-75 27.42542705068881 33.0 26.0 35.0 2.0 37.5 76-77 26.82439278769337 33.0 25.0 35.0 2.0 37.0 78-79 26.236356005943293 32.0 23.5 35.0 2.0 36.0 80-81 25.632482255530384 32.0 21.0 34.5 2.0 36.0 82-83 24.981134182712015 31.0 19.0 34.0 2.0 35.0 84-85 24.338562518622908 31.0 16.5 34.0 2.0 35.0 86-87 23.694155590050237 30.5 7.5 34.0 2.0 35.0 88-89 23.003539085799886 30.0 2.0 34.0 2.0 35.0 90-91 22.22150894178657 29.5 2.0 34.0 2.0 35.0 92-93 21.35589612095177 29.0 2.0 34.0 2.0 35.0 94-95 20.399553938018677 28.0 2.0 33.0 2.0 34.5 96-97 19.467172641722726 27.0 2.0 33.0 2.0 34.0 98 18.822506048461864 25.0 2.0 33.0 2.0 34.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 216253.0 3 37808.0 4 28959.0 5 25281.0 6 23726.0 7 25033.0 8 28280.0 9 32899.0 10 36608.0 11 40286.0 12 44709.0 13 49841.0 14 42180.0 15 42413.0 16 46926.0 17 53382.0 18 59628.0 19 60081.0 20 64212.0 21 70119.0 22 77066.0 23 85427.0 24 95731.0 25 107671.0 26 122556.0 27 140767.0 28 162411.0 29 189792.0 30 225547.0 31 272614.0 32 337675.0 33 433300.0 34 574865.0 35 786428.0 36 1010025.0 37 965519.0 38 355949.0 39 12040.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.697349148544326 17.754160240004797 14.405452792107337 24.143037819343533 2 16.005892289655634 19.15131661129454 37.8595368223695 26.98325427668033 3 19.897762338769954 22.75537961186594 27.667492214553818 29.67936583481029 4 14.237872600432796 15.377143663509388 34.366264980842146 36.01871875521567 5 16.27008825334711 35.748322361125204 31.93167601123985 16.04991337428784 6 35.15021739021418 32.73404461854447 16.640463307297132 15.475274683944216 7 31.265811814606497 30.246578717607314 19.3050501114822 19.18255935630399 8 28.698824523813922 32.089601935778525 18.89255847771688 20.319015062690678 9 27.410443071871804 16.070556063762574 18.91468556623968 37.60431529812595 10-11 26.88600543063821 24.606303074635974 25.656951559171144 22.85073993555467 12-13 27.191667463218117 21.855603300909216 26.126901923215307 24.825827312657363 14-15 24.53518065774128 23.233806792795228 23.870480978752752 28.36053157071074 16-17 24.779632016650773 26.184347683130653 24.404484103417754 24.63153619680082 18-19 24.828432157341922 25.695295224910836 25.57397193067359 23.902300687073648 20-21 25.72163054453614 24.615539275382964 25.268640999838638 24.39418918024226 22-23 25.32235426487003 24.35537925980869 25.222417509177593 25.09984896614369 24-25 25.18376957330526 24.643509989357437 25.219669862062222 24.953050575275082 26-27 25.1313084991088 24.650543230001702 25.383474701514597 24.834673569374903 28-29 24.95419770312086 25.030396330313092 25.17688915844155 24.838516808124492 30-31 25.22021238240983 24.707648430112165 25.04473732789802 25.027401859579985 32-33 25.112512398529006 24.713123999613273 24.988895931134003 25.185467670723718 34-35 25.352534237757716 24.686169611343487 25.098883680215994 24.862412470682795 36-37 25.305522347866315 24.61811237424404 25.109443690477406 24.966921587412237 38-39 25.254965540993545 24.719079764403812 25.05662400601512 24.969330688587515 40-41 25.334081099939816 24.703262829041847 25.058377564870543 24.904278506147797 42-43 25.290796022980356 24.682584746043325 24.83489310413633 25.191726126839985 44-45 25.36865993119917 24.547755487516508 24.85316830077696 25.230416280507367 46-47 25.5257892001441 24.651746739189413 24.8694531533247 24.95301090734178 48-49 25.387769469892547 24.746570164044815 24.76145801335071 25.10420235271193 50-51 25.057750249762904 24.944372788891226 24.958082580878056 25.03979438046781 52-53 25.34999722337325 24.907335934311135 24.6715783549304 25.071088487385218 54-55 25.29638317693618 24.570076441895534 24.881123426997853 25.25241695417043 56-57 25.328090601228098 24.668425887726727 24.83249637901982 25.170987132025356 58-59 25.518608079193754 24.591130998618052 24.773565334525912 25.11669558766228 60-61 25.382401186474063 24.58374921169326 24.982560636198357 25.05128896563432 62-63 25.17011625579485 24.76888797687739 24.928472395213706 25.132523372114058 64-65 25.24525555148655 24.724505268513912 24.836225738556248 25.194013441443293 66-67 25.372843392849493 24.700515184235343 24.701789733255612 25.224851689659555 68-69 25.23645233508579 24.640590075512016 24.78954844295825 25.33340914644394 70-71 25.277558907419312 24.544219114083287 24.855795546813688 25.32242643168371 72-73 25.394374802880026 24.525130121657863 24.87165129805187 25.208843777410237 74-75 25.111899016724 24.890592701817514 24.753904141825885 25.2436041396326 76-77 25.389801191377348 24.516345028346006 24.711899209404436 25.381954570872207 78-79 25.307898300140756 24.550511488167206 24.84867941668975 25.29291079500229 80-81 25.347228439863372 24.548146188867044 24.790413055370795 25.314212315898793 82-83 25.412081025452533 24.51031088192845 24.801919360807677 25.275688731811336 84-85 25.306461663332442 24.673591957481854 24.687146003900402 25.332800375285302 86-87 25.27999224557761 24.648212474049757 24.833890047266454 25.23790523310618 88-89 25.253645555855968 24.454855985628015 24.67451106982074 25.61698738869528 90-91 25.24418018468938 24.410769543871456 24.747053506128147 25.597996765311017 92-93 25.415283980743276 24.63721415911614 24.74838753658708 25.199114323553506 94-95 25.466832183496706 24.443022226466983 24.75621783063877 25.33392775939754 96-97 25.33000840891565 24.429866817245202 24.850621830431013 25.389502943408132 98 25.432622769110758 24.571181282398257 24.51214297826024 25.484052970230742 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 849.0 1 630.5 2 578.5 3 774.0 4 687.5 5 649.5 6 1043.0 7 1996.5 8 2954.5 9 3084.5 10 2517.5 11 2152.0 12 2351.0 13 2845.5 14 3411.0 15 3919.0 16 4382.5 17 4617.5 18 4648.0 19 4539.0 20 4207.0 21 3748.0 22 3379.0 23 3345.5 24 3457.5 25 3699.5 26 4327.0 27 5321.5 28 6665.0 29 8694.0 30 11692.5 31 16044.0 32 22580.5 33 31393.0 34 43051.0 35 57243.0 36 73608.5 37 92579.0 38 113152.5 39 133409.0 40 153668.0 41 175255.0 42 198360.5 43 222439.5 44 244662.5 45 267591.0 46 298186.0 47 327564.0 48 339034.0 49 335414.0 50 331837.0 51 333562.5 52 336878.0 53 338993.5 54 335452.0 55 325363.5 56 307939.5 57 287277.5 58 264734.0 59 237951.0 60 209240.0 61 176444.0 62 141926.0 63 108312.0 64 79786.0 65 60327.5 66 46613.0 67 35843.5 68 27292.0 69 20679.5 70 15378.5 71 11303.0 72 8633.0 73 6586.5 74 4968.0 75 3667.5 76 2592.5 77 1658.0 78 1010.0 79 613.0 80 361.5 81 216.5 82 123.0 83 73.5 84 45.0 85 27.5 86 23.5 87 26.0 88 21.5 89 18.0 90 14.5 91 11.0 92 8.0 93 6.5 94 7.5 95 7.5 96 6.0 97 4.0 98 2.5 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.4745986079338122 2 0.048095598987801705 3 0.05721643749784329 4 0.05501139961629477 5 0.06522043863930835 6 0.06617977330205999 7 0.043986210208552194 8 0.01990261464514569 9 0.012184982059725884 10-11 0.014805254347540028 12-13 0.011161214471864075 14-15 0.01544958359864187 16-17 0.014719343780726452 18-19 0.055791753931518105 20-21 0.08477941101719971 22-23 0.10158208604315545 24-25 0.07094065054631246 26-27 0.0869056975458358 28-29 0.08864538652381075 30-31 0.05866975791977299 32-33 0.03339057363487752 34-35 0.4006367691212222 36-37 0.6254289264028515 38-39 0.5752643145976228 40-41 0.5694796697655085 42-43 0.5426827321335732 44-45 0.5276698605829003 46-47 0.5171529753621381 48-49 0.5066933638525849 50-51 0.521448503702817 52-53 0.603242522523245 54-55 0.573309849202614 56-57 0.5296815996891183 58-59 0.5080106592103931 60-61 0.5206538309597915 62-63 0.5328388130195173 64-65 0.5519395957077362 66-67 0.5780993633024709 68-69 0.5312065122500593 70-71 0.4803188198408163 72-73 0.46305079591128706 74-75 0.4435061419611979 76-77 0.4577529776244497 78-79 0.45173207873359805 80-81 0.448789641820233 82-83 0.46870657489318096 84-85 0.4347647417879163 86-87 0.43750672071204966 88-89 0.464296499130084 90-91 0.44747950567632594 92-93 0.44248953358723725 94-95 0.4530708517331097 96-97 0.44770144130726097 98 0.4423535085231157 >>END_MODULE >>Sequence Length Distribution pass #Length Count 98 6984007.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.09591028526579 #Duplication Level Percentage of deduplicated Percentage of total 1 70.34212169944007 33.12826252832078 2 14.296357704815096 13.465999597440803 3 5.6799547469812035 8.02507917564589 4 2.9860052112523934 5.625145341619153 5 1.7729380371739538 4.174906537003987 6 1.0948265366865544 3.093711140983093 7 0.7606491910826303 2.507642624325129 8 0.5158912655607394 1.943709500784065 9 0.3767117574723817 1.5967424819991682 >10 1.9953041318965474 16.578708401103633 >50 0.12204153144123647 3.9131358941038994 >100 0.05459793581446252 4.350877409743988 >500 0.001835512946782006 0.5807161398543046 >1k 6.729689444051134E-4 0.6909886760970196 >5k 6.117899439716765E-5 0.17032689270645465 >10k+ 3.0589497198583826E-5 0.15404765826863906 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAGTAAGCAGTGGTATCAACGCAGAGTAAGCAGTGGTATCAACGCAGAGT 10693 0.15310694848959916 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.4318427802263084E-5 2 0.0 0.0 0.0 0.0 1.4318427802263084E-5 3 0.0 0.0 0.0 0.0 1.4318427802263084E-5 4 0.0 0.0 0.0 2.8636855604526168E-5 4.295528340678925E-5 5 0.0 0.0 0.0 2.8636855604526168E-5 5.7273711209052336E-5 6 1.4318427802263084E-5 0.0 0.0 2.8636855604526168E-5 1.1454742241810467E-4 7 1.4318427802263084E-5 4.295528340678925E-5 0.0 2.8636855604526168E-5 1.2886585022036775E-4 8 1.4318427802263084E-5 4.295528340678925E-5 0.0 4.295528340678925E-5 1.2886585022036775E-4 9 1.4318427802263084E-5 4.295528340678925E-5 0.0 4.295528340678925E-5 1.5750270582489393E-4 10-11 2.8636855604526168E-5 4.295528340678925E-5 0.0 5.7273711209052336E-5 1.5750270582489393E-4 12-13 5.7273711209052336E-5 5.7273711209052336E-5 0.0 8.59105668135785E-5 3.4364226725431407E-4 14-15 5.7273711209052336E-5 8.591056681357852E-5 0.0 8.59105668135785E-5 4.1523440626562943E-4 16-17 5.7273711209052336E-5 1.002289946158416E-4 0.0 1.002289946158416E-4 4.5103047577128716E-4 18-19 5.7273711209052336E-5 1.002289946158416E-4 0.0 1.2170663631923621E-4 5.15463400881471E-4 20-21 5.7273711209052336E-5 1.002289946158416E-4 0.0 1.360250641214993E-4 6.156923954973126E-4 22-23 5.7273711209052336E-5 1.002289946158416E-4 0.0 1.9329877533055166E-4 7.230806040142858E-4 24-25 7.875135291244697E-5 1.0738820851697313E-4 0.0 2.8636855604526165E-4 8.161503847289958E-4 26-27 9.306978071471004E-5 1.1454742241810467E-4 1.4318427802263084E-5 3.364830533531825E-4 8.877425237403113E-4 28-29 1.002289946158416E-4 1.1454742241810467E-4 1.4318427802263084E-5 6.443292511018389E-4 9.306978071471005E-4 30-31 1.002289946158416E-4 1.2886585022036775E-4 1.4318427802263084E-5 0.0012170663631923622 9.521754488504952E-4 32-33 1.1454742241810467E-4 1.2886585022036775E-4 1.4318427802263084E-5 0.0026990236407265916 9.951307322572844E-4 34-35 1.1454742241810467E-4 1.2886585022036775E-4 1.4318427802263084E-5 0.004768036458153607 0.0011025189407742576 36-37 1.1454742241810467E-4 1.4318427802263083E-4 1.4318427802263084E-5 0.007323875820857568 0.0011025189407742576 38-39 1.1454742241810467E-4 1.5750270582489393E-4 1.4318427802263084E-5 0.011676677872745546 0.001123996582477652 40-41 1.2886585022036775E-4 1.5750270582489393E-4 1.4318427802263084E-5 0.016816993453757992 0.0011311557963787837 42-43 1.2886585022036775E-4 1.5750270582489393E-4 1.4318427802263084E-5 0.02177832868724215 0.0011526334380821783 44-45 1.360250641214993E-4 1.5750270582489393E-4 1.4318427802263084E-5 0.028099914561941303 0.001202747935390099 46-47 1.4318427802263085E-4 1.5750270582489393E-4 1.4318427802263084E-5 0.03482241641510382 0.001295817716104809 48-49 1.4318427802263085E-4 1.6466191972602546E-4 1.4318427802263084E-5 0.04173821704359689 0.0014246835663251768 50-51 1.4318427802263085E-4 1.7898034752828856E-4 2.1477641703394626E-5 0.048381967543846965 0.0014747980636330977 52-53 1.5750270582489393E-4 1.861395614294201E-4 2.8636855604526168E-5 0.05511878782481175 0.0015893454860512024 54-55 1.5750270582489393E-4 3.1500541164978786E-4 2.8636855604526168E-5 0.0626645992766044 0.0016537784111613865 56-57 1.5750270582489393E-4 3.722791228588402E-4 3.579606950565771E-5 0.07167089036422787 0.001675256052864781 58-59 1.5750270582489393E-4 3.865975506611033E-4 4.295528340678925E-5 0.08074161437696153 0.0017038929084693072 60-61 1.861395614294201E-4 3.865975506611033E-4 4.295528340678925E-5 0.08914653149688997 0.0017611666196783594 62-63 1.861395614294201E-4 3.865975506611033E-4 4.295528340678925E-5 0.09813850415671119 0.0018184403308874118 64-65 1.861395614294201E-4 4.009159784633664E-4 4.295528340678925E-5 0.1074025269447754 0.0018184403308874118 66-67 1.861395614294201E-4 4.152344062656295E-4 4.295528340678925E-5 0.116960077502786 0.0018399179725908064 68-69 1.861395614294201E-4 4.152344062656295E-4 4.295528340678925E-5 0.1274912811513505 0.0019043508977009903 70-71 1.861395614294201E-4 4.7250811747468185E-4 4.295528340678925E-5 0.1386095403398078 0.0019186693255032533 72-73 1.861395614294201E-4 5.297818286837342E-4 4.295528340678925E-5 0.1491192663466689 0.0022909484483620932 74-75 1.861395614294201E-4 5.441002564859972E-4 4.295528340678925E-5 0.16002274911809222 0.002348222159571146 76-77 1.861395614294201E-4 5.441002564859972E-4 4.295528340678925E-5 0.17165647170743098 0.0023696998012745405 78-79 1.861395614294201E-4 5.441002564859972E-4 4.295528340678925E-5 0.18526613733348207 0.0024054958707801985 80-81 1.861395614294201E-4 5.512594703871287E-4 4.295528340678925E-5 0.19908342016266592 0.0024484511541869878 82-83 1.861395614294201E-4 5.584186842882603E-4 4.295528340678925E-5 0.2121203486766265 0.00250572486539604 84-85 1.861395614294201E-4 5.584186842882603E-4 5.7273711209052336E-5 0.2255152378856436 0.00250572486539604 86 1.861395614294201E-4 5.727371120905234E-4 5.7273711209052336E-5 0.23635428773195674 0.00250572486539604 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTACATG 27780 0.0 24.40895 1 TACATGG 28395 0.0 23.394897 2 ACATGGG 28975 0.0 21.977255 3 GTATCAA 26800 0.0 21.522608 1 CATGGGG 22740 0.0 18.971022 4 GAGTACA 20560 0.0 18.76288 1 TATCAAC 30805 0.0 18.528608 2 TCAACGC 31010 0.0 18.317286 4 CAACGCA 31110 0.0 18.243668 5 ATCAACG 31460 0.0 18.08455 3 AGAGTAC 22335 0.0 17.987175 10-11 AGTACAT 20015 0.0 17.957884 2 AACGCAG 32215 0.0 17.656288 6 ACGCAGA 35695 0.0 15.85289 7 ATACCGT 1045 0.0 15.789629 6 CGCAGAG 37150 0.0 15.228184 8 GTACCTG 6570 0.0 15.20453 1 GTGTAGC 3510 0.0 15.082361 1 ATGGGGG 10660 0.0 14.837251 5 GGTATCA 20730 0.0 14.678469 1 >>END_MODULE