##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921422_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 6984007 Sequences flagged as poor quality 0 Sequence length 101 %GC 50 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.4743517582385 33.0 31.0 34.0 30.0 34.0 2 31.606590886864804 33.0 31.0 34.0 28.0 34.0 3 31.729432115403092 34.0 31.0 34.0 28.0 34.0 4 35.3256170848626 37.0 35.0 37.0 33.0 37.0 5 35.055683363433054 37.0 35.0 37.0 32.0 37.0 6 35.08518032699566 37.0 35.0 37.0 32.0 37.0 7 34.996521910702555 37.0 35.0 37.0 32.0 37.0 8 34.94063765972743 37.0 35.0 37.0 32.0 37.0 9 36.48373491034588 39.0 37.0 39.0 32.0 39.0 10-11 36.360297892026736 39.0 37.0 39.0 32.0 39.0 12-13 36.22087692638338 39.0 37.0 39.0 32.0 39.0 14-15 37.38939644533575 40.0 38.0 41.0 32.0 41.0 16-17 37.2581717057271 40.0 37.0 41.0 32.0 41.0 18-19 37.13134036091316 40.0 37.0 41.0 31.0 41.0 20-21 36.993155505141964 40.0 37.0 41.0 31.0 41.0 22-23 36.94412548555579 40.0 37.0 41.0 31.0 41.0 24-25 36.983021351496355 40.0 37.0 41.0 31.0 41.0 26-27 36.84474213728595 40.0 37.0 41.0 30.5 41.0 28-29 36.68247318480637 40.0 36.5 41.0 30.0 41.0 30-31 36.52052181505546 39.0 36.0 41.0 30.0 41.0 32-33 36.3302271890621 39.0 36.0 41.0 30.0 41.0 34-35 36.15059470873955 39.0 36.0 40.0 30.0 41.0 36-37 36.02498365193506 39.0 35.0 40.0 29.0 41.0 38-39 35.9659303749266 39.0 35.0 40.0 29.0 41.0 40-41 35.77343608046212 39.0 35.0 40.0 28.5 41.0 42-43 35.48601010852366 38.5 35.0 40.0 27.0 41.0 44-45 35.239830730410205 38.0 35.0 40.0 27.0 41.0 46-47 34.92212514964547 38.0 34.0 40.0 26.0 41.0 48-49 34.53065260387053 38.0 34.0 40.0 24.0 41.0 50-51 34.196518273821894 38.0 33.0 40.0 24.0 41.0 52-53 33.825069834552 37.5 33.0 40.0 23.0 41.0 54-55 33.42962879332738 37.0 32.5 40.0 22.0 41.0 56-57 32.971486640835266 36.5 32.0 39.0 20.5 40.0 58-59 32.50889467894291 36.0 31.0 39.0 18.5 40.0 60-61 32.00378665141659 35.5 31.0 39.0 16.0 40.0 62-63 31.504609459870245 35.0 30.5 38.0 12.5 40.0 64-65 30.913853322311965 34.5 29.5 38.0 8.0 40.0 66-67 30.309896238649245 34.0 29.0 37.0 7.0 39.0 68-69 29.740649744480496 34.0 28.5 36.5 4.5 39.0 70-71 29.11668473413615 33.5 27.5 36.0 2.0 39.0 72-73 28.500846290675256 33.0 26.0 35.0 2.0 38.0 74-75 27.92747859502432 32.5 26.0 35.0 2.0 37.0 76-77 26.861054764120368 31.0 25.5 34.0 2.0 35.5 78-79 27.805173305238668 32.5 26.5 35.0 2.0 36.0 80-81 27.807761647432486 33.0 26.5 35.0 2.0 36.0 82-83 27.410300777189942 33.0 26.0 35.0 2.0 35.5 84-85 26.833634187365504 32.0 25.0 34.5 2.0 35.0 86-87 26.22024025749115 32.0 24.5 34.0 2.0 35.0 88-89 25.589839972955353 31.5 22.5 34.0 2.0 35.0 90-91 24.97937144106528 31.0 19.5 34.0 2.0 35.0 92-93 24.408780661302316 31.0 18.0 34.0 2.0 35.0 94-95 23.7393300865821 31.0 9.5 34.0 2.0 35.0 96-97 22.758319185533463 30.0 2.0 34.0 2.0 35.0 98-99 21.51659806469266 29.5 2.0 34.0 2.0 35.0 100-101 18.031537840669404 23.5 2.0 31.5 2.0 34.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 77608.0 3 36849.0 4 21758.0 5 15935.0 6 13828.0 7 14218.0 8 16520.0 9 19596.0 10 22895.0 11 27005.0 12 31086.0 13 36032.0 14 39801.0 15 44318.0 16 49247.0 17 54884.0 18 56849.0 19 54414.0 20 56335.0 21 59240.0 22 63585.0 23 70176.0 24 78490.0 25 91185.0 26 108030.0 27 129728.0 28 156896.0 29 189454.0 30 232098.0 31 286233.0 32 362311.0 33 475364.0 34 645561.0 35 895482.0 36 1165740.0 37 1019201.0 38 262626.0 39 3429.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.963127875360705 18.43781464687016 14.922775513956138 23.676281963813008 2 16.28188516993182 19.760948120470097 37.2644958689188 26.692670840679284 3 19.947757431471008 23.30192679195776 28.017203791123084 28.733111985448147 4 14.636247146092554 15.961795463089464 34.43982897185979 34.9621284189582 5 16.280726050604986 35.82102802186033 32.05271610326267 15.84552982427202 6 35.03481794277057 33.07023291192851 16.519692916103537 15.375256229197385 7 31.2148215250104 30.336313421199428 19.442540683837812 19.006324369952356 8 28.641720179324377 32.27775728143372 18.918670220130736 20.161852319111166 9 27.292031639096916 16.167041384434057 18.92945751720912 37.61146945925991 10-11 26.889423123088736 24.741840813909977 25.746565939282952 22.62217012371834 12-13 27.23924708008884 21.919969994534494 26.248648224111705 24.592134701264964 14-15 24.50787081459338 23.318548169293614 23.97051286772054 28.20306814839246 16-17 24.727196838386714 26.245724592956325 24.54454981659383 24.482528752063132 18-19 24.78483503750969 25.772741424108403 25.729089280200856 23.713334258181053 20-21 25.67415256006354 24.648607531591573 25.439593723528077 24.237646184816807 22-23 25.29464916627024 24.387707436894964 25.42139138837596 24.89625200845884 24-25 25.167459187339798 24.717134323928672 25.336051706575823 24.779354782155703 26-27 25.05746848238094 24.666599737659293 25.573163167525546 24.702768612434216 28-29 24.91868238794038 25.071904583325065 25.334660203984523 24.67475282475003 30-31 25.184978939735686 24.768119444975838 25.175378105343704 24.871523509944772 32-33 25.027129579837144 24.744016833119417 25.185543272118366 25.043310314925076 34-35 25.29951407161789 24.720780377970073 25.259097007612226 24.72060854279981 36-37 25.225509302726373 24.687077940875223 25.286569710357583 24.80084304604082 38-39 25.202073073106046 24.774433721378173 25.216723209797692 24.806769995718092 40-41 25.30577186782813 24.716848727009737 25.19726605156407 24.78011335359806 42-43 25.207960802821628 24.82608958373188 24.95594784935582 25.010001764090674 44-45 25.277374858210422 24.5879706873449 25.014975528632938 25.11967892581174 46-47 25.407270342034334 24.7046978520095 25.076056164552284 24.811975641403887 48-49 25.315206969705994 24.843796178139655 24.919041487872544 24.921955364281803 50-51 25.036401805480867 24.967289030084928 25.06309324095958 24.933215923474624 52-53 25.332555251305532 24.93462228048053 24.76999936782625 24.962823100387688 54-55 25.354690905128447 24.613796526679938 24.89035394667442 25.141158621517196 56-57 25.349813177379215 24.749721264186565 24.8621892765985 25.03827628183572 58-59 25.600720282288115 24.65933034680982 24.773485295561088 24.966464075340976 60-61 25.45629330613261 24.670828823685532 25.007129163400997 24.865748706780856 62-63 25.21154310470009 24.794951262885988 24.968595042742532 25.02491058967139 64-65 25.294227316609643 24.765312636302532 24.868011179420886 25.072448867666942 66-67 25.44649465945326 24.745663610120356 24.67517585591736 25.132665874509026 68-69 25.302346925340263 24.689486666763134 24.819182118489422 25.18898428940718 70-71 25.36912768977314 24.573631249859933 24.88839443139604 25.168846628970886 72-73 25.51411933985329 24.557036667400954 24.850569520192522 25.07827447255323 74-75 25.213045808340645 24.920253315609777 24.69693251568897 25.169768360360607 76-77 25.40651739049603 24.575864372535484 24.792159019255543 25.225459217712938 78-79 25.323685011617403 24.62878289248619 24.927867205590626 25.11966489030578 80-81 25.380664964127803 24.63590685976112 24.831846834523823 25.15158134158726 82-83 25.393733942927987 24.620001128596076 24.880358790431455 25.10590613804449 84-85 25.307881054696914 24.75696860886749 24.78026192919819 25.154888407237415 86-87 25.265690226920245 24.691225646286988 24.86972624413211 25.173357882660657 88-89 25.26091141508806 24.565099664098074 24.73966071566721 25.434328205146656 90-91 25.280025084031006 24.56019253456169 24.77911866247749 25.380663718929817 92-93 25.491000816320213 24.787856661991643 24.77518604286537 24.94595647882277 94-95 25.449574580890488 24.61540444260198 24.73150106162357 25.20351991488396 96-97 25.26728569443304 24.566091444001078 24.95505353231517 25.21156932925071 98-99 25.35784297475157 24.610320200485003 24.6962828493346 25.33555397542883 100-101 26.006939693628482 23.810496517516164 24.848994755385572 25.33356903346978 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 271.0 1 236.5 2 360.5 3 537.5 4 409.5 5 316.5 6 669.5 7 1627.5 8 2517.0 9 2493.5 10 1781.5 11 1173.5 12 1065.0 13 1132.5 14 1223.5 15 1341.0 16 1437.5 17 1568.5 18 1753.5 19 1884.5 20 2006.0 21 2118.5 22 2264.0 23 2518.5 24 2809.0 25 3247.5 26 3773.5 27 4452.5 28 5645.5 29 7445.0 30 10161.0 31 14064.5 32 19721.5 33 27239.5 34 36664.5 35 48739.0 36 62915.0 37 79533.0 38 98832.0 39 117380.0 40 136990.5 41 157770.0 42 178544.5 43 201886.0 44 225858.5 45 248081.5 46 269283.0 47 296411.0 48 330276.0 49 341984.5 50 329636.0 51 326469.0 52 331516.5 53 333070.0 54 331576.0 55 322224.0 56 305123.0 57 282976.0 58 258994.0 59 234035.0 60 205343.0 61 175497.0 62 142827.0 63 108860.5 64 80912.0 65 61281.0 66 46858.5 67 36038.5 68 27698.0 69 21029.5 70 16121.5 71 12211.0 72 8966.0 73 6785.0 74 5084.0 75 3734.5 76 2672.5 77 1703.5 78 1069.0 79 623.0 80 359.5 81 205.0 82 102.5 83 49.5 84 29.5 85 17.5 86 11.5 87 8.0 88 3.0 89 1.0 90 2.0 91 2.0 92 0.5 93 0.0 94 0.5 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.31267150791801895 2 0.0 3 0.0061569239549731265 4 0.05874850927268544 5 4.438712618701556E-4 6 0.06323017717479379 7 0.07345353462560962 8 0.10241971406958784 9 0.09036359786008233 10-11 0.0948739026177952 12-13 0.09466628541466239 14-15 0.06426110397655672 16-17 0.03591061692807582 18-19 0.038337590440559406 20-21 0.028114232989743568 22-23 0.04163798804898105 24-25 0.03408501738328727 26-27 0.02124854685855842 28-29 0.023818704649064642 30-31 0.003422104244740877 32-33 0.005634301340190524 34-35 0.00816866306119109 36-37 0.010860527488016549 38-39 0.016280052411173127 40-41 0.020503988612840737 42-43 0.003422104244740877 44-45 0.013573869556545406 46-47 0.023868819146372563 48-49 0.0026202722878141444 50-51 0.007066144120416833 52-53 0.002398336656879067 54-55 0.00408791113754611 56-57 0.0034865371698510612 58-59 0.0011239965824776522 60-61 0.005276340645133946 62-63 0.014790935919737767 64-65 0.0066007952168432825 66-67 0.037979629745502834 68-69 0.06005148620269137 70-71 0.011748270011756861 72-73 0.030999396191899578 74-75 0.04962767076264385 76-77 0.30142438287934137 78-79 0.07214339848170255 80-81 0.03260306010575305 82-83 0.026932962696056866 84-85 0.018878847057283876 86-87 0.11626563375437625 88-89 0.5196801778692375 90-91 0.1296032492521843 92-93 0.047114786683346684 94-95 0.00858389746745672 96-97 0.0060352173186538904 98-99 0.010617114215378077 100-101 0.00798252349976167 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 6984007.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 44.389404291264945 #Duplication Level Percentage of deduplicated Percentage of total 1 67.61491736242264 30.013859029210483 2 15.506753601991438 13.766711097676538 3 6.307495031005573 8.399578409893534 4 3.215980963897784 5.710219167978827 5 1.9222032762991528 4.2662729180818575 6 1.177662532245866 3.136544295752196 7 0.7941062361413105 2.467493193640394 8 0.5767069824498217 2.047974352124846 9 0.44043335159110375 1.7595516696420912 >10 2.2376780458292633 17.685663389186256 >50 0.1402041807937316 4.267548352592659 >100 0.06304516636294295 4.846042089444609 >500 0.0019402291134203108 0.5741205575405117 >1k 7.760354282271428E-4 0.7312109113047363 >5k 6.466961845034504E-5 0.16318186270398324 >10k+ 3.233480922517252E-5 0.16402870322641572 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAGTAAGCAGTGGTATCAACGCAGAGTAAGCAGTGGTATCAACGCAGAGT 11428 0.16363099292426253 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.8636855604526168E-5 2 0.0 0.0 0.0 0.0 2.8636855604526168E-5 3 0.0 1.4318427802263084E-5 0.0 0.0 2.8636855604526168E-5 4 0.0 1.4318427802263084E-5 0.0 0.0 2.8636855604526168E-5 5 0.0 5.7273711209052336E-5 0.0 0.0 4.295528340678925E-5 6 0.0 5.7273711209052336E-5 0.0 0.0 5.7273711209052336E-5 7 0.0 5.7273711209052336E-5 0.0 2.8636855604526168E-5 5.7273711209052336E-5 8 0.0 7.159213901131543E-5 0.0 2.8636855604526168E-5 7.159213901131543E-5 9 0.0 7.159213901131543E-5 0.0 4.295528340678925E-5 7.159213901131543E-5 10-11 7.159213901131542E-6 7.159213901131543E-5 0.0 4.295528340678925E-5 7.875135291244697E-5 12-13 1.4318427802263084E-5 7.159213901131543E-5 0.0 6.443292511018389E-5 3.5080148115544554E-4 14-15 1.4318427802263084E-5 8.59105668135785E-5 0.0 7.159213901131543E-5 4.868265452769449E-4 16-17 1.4318427802263084E-5 8.59105668135785E-5 0.0 7.875135291244697E-5 5.584186842882603E-4 18-19 1.4318427802263084E-5 8.59105668135785E-5 0.0 1.0738820851697313E-4 6.443292511018388E-4 20-21 1.4318427802263084E-5 1.1454742241810467E-4 0.0 1.1454742241810467E-4 7.946727430256012E-4 22-23 1.4318427802263084E-5 1.1454742241810467E-4 0.0 1.503434919237624E-4 8.877425237403113E-4 24-25 2.8636855604526168E-5 1.2886585022036778E-4 0.0 2.4341327263847242E-4 9.163793793448374E-4 26-27 4.295528340678925E-5 1.4318427802263085E-4 0.0 2.7920934214413013E-4 9.87971518356153E-4 28-29 4.295528340678925E-5 1.503434919237624E-4 0.0 6.085331815961811E-4 0.001016608373960679 30-31 5.7273711209052336E-5 1.71821133627157E-4 0.0 0.0011597926519833098 0.0010309268017629422 32-33 1.002289946158416E-4 1.71821133627157E-4 0.0 0.0025773170044073555 0.0010738820851697313 34-35 1.0738820851697313E-4 1.9329877533055166E-4 0.0 0.004581896896724187 0.0011168373685765205 36-37 1.1454742241810467E-4 2.004579892316832E-4 0.0 0.0070231888370100425 0.0011311557963787837 38-39 1.1454742241810467E-4 2.004579892316832E-4 0.0 0.011189851327468602 0.0011454742241810466 40-41 1.2886585022036775E-4 2.004579892316832E-4 0.0 0.016308689266777653 0.0011597926519833098 42-43 1.2886585022036775E-4 2.004579892316832E-4 0.0 0.02106956651103013 0.0011669518658844412 44-45 1.2886585022036775E-4 2.2909484483620934E-4 0.0 0.02716205754089307 0.0012027479353900992 46-47 1.360250641214993E-4 2.2909484483620934E-4 0.0 0.033791489613340886 0.0012600216465991514 48-49 1.4318427802263085E-4 2.362540587373409E-4 0.0 0.04032785190507398 0.0013888874968195192 50-51 1.4318427802263085E-4 2.50572486539604E-4 0.0 0.046592164068564076 0.0014246835663251768 52-53 1.503434919237624E-4 2.64890914341867E-4 0.0 0.05294954601276889 0.0015392309887432816 54-55 1.71821133627157E-4 3.7227912285884017E-4 0.0 0.06015171519730722 0.0015821862721500709 56-57 1.71821133627157E-4 3.865975506611033E-4 0.0 0.06865686131185149 0.001610823127754597 58-59 1.71821133627157E-4 3.937567645622348E-4 0.0 0.07729087327661613 0.0016537784111613863 60-61 1.71821133627157E-4 4.009159784633664E-4 0.0 0.08520896385126761 0.0017325297640738333 62-63 1.71821133627157E-4 4.1523440626562943E-4 0.0 0.0934921743348768 0.0019043508977009903 64-65 1.7898034752828856E-4 4.2955283406789253E-4 0.0 0.10221925608035617 0.0019043508977009903 66-67 1.861395614294201E-4 4.2955283406789253E-4 0.0 0.11097497468144005 0.0019115101116021218 68-69 1.861395614294201E-4 4.2955283406789253E-4 0.0 0.12066139108967101 0.0019473061811077796 70-71 2.004579892316832E-4 4.2955283406789253E-4 0.0 0.13088474854048684 0.002004579892316832 72-73 2.004579892316832E-4 4.2955283406789253E-4 0.0 0.1407859413657518 0.002247993164955304 74-75 2.004579892316832E-4 4.2955283406789253E-4 0.0 0.15119543837799704 0.002348222159571146 76-77 2.1477641703394627E-4 4.2955283406789253E-4 0.0 0.1622635830691464 0.002398336656879067 78-79 2.2909484483620934E-4 4.2955283406789253E-4 0.0 0.1749282324602481 0.002441291940285856 80-81 2.2909484483620934E-4 4.2955283406789253E-4 0.0 0.18782913591008715 0.002512884079297171 82-83 2.4341327263847242E-4 4.2955283406789253E-4 0.0 0.20019309831734133 0.00269186442682546 84-85 2.577317004407355E-4 4.2955283406789253E-4 0.0 0.2130080912003668 0.0026990236407265916 86-87 2.577317004407355E-4 4.2955283406789253E-4 0.0 0.22693276223806763 0.0027777749936390385 88-89 2.577317004407355E-4 4.2955283406789253E-4 0.0 0.2416377875909918 0.0028422079187492223 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTACATG 27960 0.0 24.617395 1 TACATGG 28845 0.0 23.413921 2 ACATGGG 29145 0.0 22.260818 3 GTATCAA 28355 0.0 21.217056 1 CATGGGG 23060 0.0 19.567034 4 GAGTACA 21175 0.0 18.715925 1 AGTACAT 20420 0.0 18.304764 2 AGAGTAC 23490 0.0 18.271004 10-11 TATCAAC 32655 0.0 18.195028 2 TCAACGC 32545 0.0 18.06746 4 CAACGCA 32635 0.0 17.951305 5 ATCAACG 33575 0.0 17.527086 3 AACGCAG 34175 0.0 17.226349 6 GTATATA 1285 0.0 16.310263 1 ACGCAGA 37955 0.0 15.423631 7 GTATAGG 1310 0.0 15.271771 1 GTACCTG 6700 0.0 15.214244 1 GTATTAG 1070 0.0 15.135841 1 TATAACG 410 1.07265805E-8 15.059295 2 ATGGGGG 11030 0.0 14.978498 5 >>END_MODULE