##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921419_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2763971 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.261741892371518 31.0 31.0 34.0 26.0 34.0 2 30.303247392971922 31.0 31.0 34.0 26.0 34.0 3 30.352995744166634 33.0 31.0 34.0 26.0 34.0 4 33.811432536737904 37.0 35.0 37.0 29.0 37.0 5 33.80290495088407 37.0 35.0 37.0 29.0 37.0 6 33.85010153869197 37.0 35.0 37.0 30.0 37.0 7 33.766885397856925 37.0 35.0 37.0 29.0 37.0 8 33.73072076371279 37.0 35.0 37.0 29.0 37.0 9 35.27162875442615 39.0 35.0 39.0 29.0 39.0 10-11 35.162498629688955 39.0 35.0 39.0 28.0 39.0 12-13 35.039289124234664 39.0 35.0 39.0 27.0 39.0 14-15 36.14987874330085 40.0 36.0 41.0 27.0 41.0 16-17 36.09637402129039 40.0 36.0 41.0 27.0 41.0 18-19 36.04716583495268 40.0 36.0 41.0 27.0 41.0 20-21 35.978455996824856 40.0 36.0 41.0 27.0 41.0 22-23 35.86587467813519 40.0 36.0 41.0 27.0 41.0 24-25 35.76182836216444 40.0 36.0 41.0 27.0 41.0 26-27 35.60457779766864 40.0 36.0 41.0 26.0 41.0 28-29 35.461501405043684 40.0 36.0 41.0 25.0 41.0 30-31 35.30524198698177 39.5 35.0 41.0 25.0 41.0 32-33 35.114471895689206 39.0 35.0 41.0 24.0 41.0 34-35 34.94287005905633 39.0 35.0 41.0 24.0 41.0 36-37 34.767012027260776 39.0 35.0 41.0 23.0 41.0 38-39 34.99049573964416 39.0 35.0 41.0 24.0 41.0 40-41 35.099316526837654 40.0 35.0 41.0 24.0 41.0 42-43 34.924793349857865 40.0 35.0 41.0 22.5 41.0 44-45 34.78864557551436 40.0 35.0 41.0 21.5 41.0 46-47 34.619356534493306 39.0 35.0 41.0 19.5 41.0 48-49 34.458044603217616 39.0 35.0 41.0 18.0 41.0 50-51 32.74241517005786 37.0 32.0 39.5 15.0 40.0 52-53 32.891239633122055 37.5 32.5 39.5 13.0 40.0 54-55 33.72940200892123 38.0 34.0 40.0 13.0 41.0 56-57 33.731913974495384 38.0 34.0 41.0 12.5 41.0 58-59 33.543944925616074 38.0 34.0 40.5 9.0 41.0 60-61 33.29202133452196 37.5 33.0 40.0 8.0 41.0 62-63 32.99061694207356 37.0 33.0 40.0 6.5 41.0 64-65 32.697093240124445 36.5 33.0 40.0 2.0 41.0 66-67 32.358064719202915 36.0 33.0 39.0 2.0 41.0 68-69 31.99474867862217 35.5 32.0 39.0 2.0 41.0 70-71 31.61123958970626 35.0 32.0 38.5 2.0 40.0 72-73 31.262441791176535 35.0 32.0 37.0 2.0 40.0 74-75 30.881587759061148 35.0 31.5 37.0 2.0 39.0 76-77 30.519062971355346 35.0 31.0 36.0 2.0 39.0 78-79 30.185493444033966 35.0 31.0 36.0 2.0 38.0 80-81 29.855190412634578 35.0 31.0 35.5 2.0 37.0 82-83 29.565533972679162 35.0 31.0 35.0 2.0 37.0 84-85 29.34293250544235 35.0 30.0 35.0 2.0 36.0 86-87 29.12375310739512 35.0 30.0 35.0 2.0 36.0 88-89 28.925519659938544 34.5 30.0 35.0 2.0 36.0 90-91 28.6760575635562 34.0 30.0 35.0 2.0 35.0 92-93 28.485604950269014 34.0 30.0 35.0 2.0 35.0 94-95 28.28004400190885 34.0 29.0 35.0 2.0 35.0 96-97 28.0251010231294 34.0 29.0 35.0 2.0 35.0 98-99 27.796094097948206 34.0 29.0 35.0 2.0 35.0 100-101 26.750630885779916 33.0 26.5 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 104712.0 3 17355.0 4 11834.0 5 9109.0 6 8202.0 7 8446.0 8 9029.0 9 9617.0 10 10431.0 11 10900.0 12 11101.0 13 11143.0 14 11975.0 15 13039.0 16 13515.0 17 14489.0 18 13115.0 19 12037.0 20 11914.0 21 12427.0 22 13593.0 23 15669.0 24 18391.0 25 21200.0 26 25476.0 27 29897.0 28 35653.0 29 42035.0 30 50239.0 31 61358.0 32 76533.0 33 98768.0 34 140411.0 35 203071.0 36 334257.0 37 587468.0 38 583636.0 39 101915.0 40 11.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.70315768592983 17.71244146283105 12.751465035523196 24.832935815715924 2 16.309287725524864 19.45003754071738 39.022869790546686 25.21780494321107 3 19.670974591532634 23.445956193895352 29.069787224492437 27.813281990079574 4 13.7413992268309 15.292009077623527 35.800610846304856 35.16598084924071 5 14.539140973093737 37.21448451833804 33.683632502965516 14.562742005602711 6 33.93141207037554 34.380921019301894 16.947992733746826 14.739674176575743 7 29.465568031854666 31.814538613544673 20.37983015330638 18.340063201294278 8 27.43322929388881 34.18989460351925 19.634649658479216 18.742226444112724 9 27.630283800254183 15.445987337118108 18.932079590294684 37.99164927233302 10-11 26.32850298363223 24.87073098311039 27.125712433908916 21.675053599348466 12-13 26.72491477211039 22.358243038817594 27.152791349097775 23.76405083997423 14-15 23.86389775953075 23.8780867646806 24.44821691803587 27.809798557752778 16-17 24.017237775809388 27.02601318981187 25.27576188851904 23.680987145859703 18-19 24.109772660406303 26.337534935445195 26.64835771290311 22.904334691245392 20-21 24.506528204139943 25.417518260062373 26.821306075106694 23.25464746069099 22-23 24.457910829620946 25.187332653056053 26.424157107129915 23.930599410193082 24-25 24.2169386619371 25.42652508132711 26.354418810882223 24.00211744585356 26-27 23.797125823095367 25.7499715448633 26.383783702598674 24.069118929442663 28-29 23.957236977211714 26.16964405099414 26.095225274664628 23.777893697129514 30-31 24.41513135707907 25.64046617253073 26.021724467834122 23.922678002556076 32-33 24.096108063768824 25.746865209574914 25.95716288463135 24.199863842024907 34-35 24.422940748869905 25.872549626209107 26.040982577411313 23.66352704750967 36-37 24.44048912925499 25.664542398293445 26.1371842722614 23.757784200190162 38-39 24.277665793587992 25.78686532191565 26.043741494900285 23.89172738959607 40-41 24.424154876898267 25.578585842870826 26.09908742172441 23.898171858506498 42-43 24.183908721126596 25.648207520677502 25.880675900499977 24.287207857695922 44-45 24.004531861958366 25.73535368877143 26.144787225963633 24.115327223306572 46-47 24.277024564135722 25.66802736328824 25.838626492130633 24.21632158044541 48-49 24.066891455539672 25.905657911645758 25.815684361766895 24.211766271047676 50-51 24.203493443924682 25.885835495189724 25.96689038323266 23.94378067765294 52-53 24.436257583419884 25.616543138715635 25.992456003929693 23.95474327393479 54-55 23.735657945082895 25.571810735354706 26.32349473335437 24.36903658620803 56-57 23.932815688714236 25.777962435054235 25.971145608667484 24.31807626756404 58-59 24.032968403437142 25.68956378804918 26.09846944065593 24.178998367857744 60-61 24.100029004423174 25.676890725835687 26.308135740700457 23.914944529040678 62-63 24.075380582756583 25.65526580066491 26.339444651901374 23.929908964677136 64-65 23.79414308948513 25.521363939257046 26.284602606148983 24.399890365108842 66-67 23.83992764189991 25.647629465624917 26.08730642803478 24.425136464440396 68-69 23.95550501385144 25.568902303304842 26.274107704097577 24.201484978746144 70-71 23.86109427736346 25.411488477017823 26.199525336642736 24.52789190897598 72-73 23.80711161294006 25.764631148172345 25.995637592103083 24.432619646784516 74-75 23.80531821902969 25.84553534970555 26.11344173434858 24.235704696916176 76-77 23.854534026836234 25.358352020202663 26.130269393581262 24.65684455937984 78-79 23.773031825795645 25.42974613326372 26.240654934122272 24.556567106818363 80-81 24.045321647763913 25.6644699115986 25.907514381702374 24.38269405893511 82-83 23.976752479131854 25.609927441237158 26.11916040466698 24.294159674964007 84-85 23.88094524606016 25.753337789338982 26.01223207994125 24.35348488465961 86-87 23.782334239004797 26.000168623515364 25.889747418292387 24.32774971918745 88-89 23.64574248772961 25.68352458882638 26.02535487579121 24.64537804765281 90-91 23.842605435509036 25.416590969006204 26.14223690122244 24.598566694262317 92-93 24.038643902336425 25.29300051603049 26.22073122571928 24.447624355913806 94-95 23.949192012571796 25.255949425575828 26.244440632318117 24.550417929534255 96-97 23.87085133487168 24.94045325342388 26.37905912967001 24.80963628203443 98-99 23.608231645955673 25.104848392759816 26.273058033698714 25.013861927585797 100-101 23.921994803981498 24.99679487586332 26.38938731264077 24.691823007514408 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 111.0 1 90.5 2 96.0 3 154.0 4 168.0 5 168.5 6 252.5 7 477.5 8 780.5 9 907.0 10 784.5 11 663.0 12 653.5 13 710.5 14 791.5 15 888.5 16 1021.0 17 1122.0 18 1270.5 19 1393.0 20 1477.5 21 1651.5 22 1882.5 23 2134.0 24 2471.0 25 3025.0 26 3897.0 27 5220.5 28 7087.5 29 9833.0 30 13724.0 31 18979.5 32 26409.0 33 31005.0 34 33122.5 35 37867.0 36 45033.0 37 52378.5 38 58792.5 39 64532.5 40 69249.5 41 74290.0 42 79320.0 43 85431.5 44 91562.5 45 98875.5 46 105331.0 47 110058.0 48 115210.5 49 118202.5 50 119413.5 51 120080.5 52 120875.5 53 121166.0 54 119141.0 55 114299.0 56 107003.0 57 97392.0 58 88447.0 59 77533.0 60 64101.5 61 53374.5 62 44785.5 63 34853.0 64 25113.0 65 18421.5 66 13889.5 67 10692.0 68 8119.5 69 6230.0 70 4837.0 71 3471.5 72 2474.0 73 1931.0 74 1497.0 75 1144.0 76 876.5 77 597.5 78 379.5 79 266.0 80 202.5 81 144.5 82 106.5 83 96.0 84 75.5 85 67.0 86 61.0 87 46.5 88 45.5 89 38.5 90 28.0 91 28.5 92 24.0 93 18.0 94 16.5 95 15.5 96 16.0 97 13.5 98 11.0 99 6.5 100 2.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.051013559838363 2 0.059226381174042705 3 0.05021760358556584 4 0.05694705190466905 5 0.049928164948185055 6 0.01848789296269751 7 0.015195528462491104 8 0.02156317848486833 9 0.02239531456733808 10-11 0.023317900223989326 12-13 0.02861824527102491 14-15 0.045894113939690395 16-17 0.03087948462556228 18-19 0.023878687583914593 20-21 0.027804199103391464 22-23 0.04963872631080428 24-25 0.043723324159334526 26-27 0.030734765306871886 28-29 0.020097895383128114 30-31 0.012988558852462636 32-33 0.009750464096765126 34-35 0.009406755714875445 36-37 0.0014110133572313168 38-39 0.006801807978448399 40-41 0.0035637132227508903 42-43 0.21568605459319218 44-45 0.19108377041582564 46-47 0.19745142043820288 48-49 0.194737933212758 50-51 0.1934354593445445 52-53 0.1984825455838719 54-55 0.19651074486671533 56-57 0.20651446777118862 58-59 0.2038009805457438 60-61 0.20879379704056228 62-63 0.20626120896348044 64-65 0.20712952487562278 66-67 0.19784939856460146 68-69 0.19584141801777225 70-71 0.1795604946651032 72-73 0.18717634881118506 74-75 0.18710398915183987 76-77 0.18547589681657295 78-79 0.21096458682091815 80-81 0.2185080813076548 82-83 0.2170608881207509 84-85 0.21329818583480073 86-87 0.22968764867648755 88-89 0.22851180421212813 90-91 0.22757112864064058 92-93 0.23089967297051958 94-95 0.24197070085033454 96-97 0.24180789161680785 98-99 0.2322021468387331 100-101 0.24122901434204627 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2763971.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.75184112489768 #Duplication Level Percentage of deduplicated Percentage of total 1 77.25126010972978 43.068999803358004 2 12.058674598705213 13.445866208077048 3 4.098159016890939 6.854397312428115 4 1.934589652575968 4.314277398091455 5 1.114595589825824 3.107037812124048 6 0.7275144255518737 2.4336161201663558 7 0.5106870191911499 1.9930219090944796 8 0.35926809571175755 1.6023886234693152 9 0.28257112452637484 1.4178474396970315 >10 1.5668550869720794 15.458121012752413 >50 0.07042004221404492 2.664850494214478 >100 0.022927313661077874 2.204136605951296 >500 0.001304170760041463 0.5143499812405813 >1k 0.0011737536839552835 0.9210892793355137 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.617982967259787E-5 2 0.0 0.0 0.0 0.0 3.617982967259787E-5 3 0.0 0.0 0.0 0.0 3.617982967259787E-5 4 0.0 0.0 0.0 3.617982967259787E-5 3.617982967259787E-5 5 0.0 0.0 0.0 3.617982967259787E-5 3.617982967259787E-5 6 0.0 0.0 0.0 3.617982967259787E-5 7.235965934519574E-5 7 0.0 0.0 0.0 3.617982967259787E-5 7.235965934519574E-5 8 0.0 0.0 0.0 3.617982967259787E-5 7.235965934519574E-5 9 0.0 0.0 0.0 7.235965934519574E-5 7.235965934519574E-5 10-11 0.0 0.0 0.0 1.2662940385409254E-4 7.235965934519574E-5 12-13 0.0 0.0 0.0 1.4471931869039148E-4 7.235965934519574E-5 14-15 0.0 0.0 0.0 1.4471931869039148E-4 9.044957418149467E-5 16-17 0.0 0.0 0.0 1.8089914836298934E-4 1.4471931869039148E-4 18-19 0.0 0.0 0.0 1.8089914836298934E-4 1.4471931869039148E-4 20-21 0.0 0.0 0.0 1.9898906319928825E-4 1.4471931869039148E-4 22-23 0.0 0.0 0.0 2.71348722544484E-4 2.3516889287188614E-4 24-25 0.0 0.0 0.0 5.065176154163702E-4 3.256184670533808E-4 26-27 0.0 0.0 0.0 0.0010311251456690393 3.256184670533808E-4 28-29 0.0 0.0 0.0 0.0035998930524234877 3.256184670533808E-4 30-31 0.0 0.0 0.0 0.013277997489843417 3.4370838188967973E-4 32-33 0.0 0.0 0.0 0.03498589529340214 4.341579560711744E-4 34-35 0.0 0.0 0.0 0.06313380277868327 4.341579560711744E-4 36-37 0.0 0.0 0.0 0.10658577821547331 4.7033778574377227E-4 38-39 0.0 0.0 0.0 0.17346419336527047 5.246075302526691E-4 40-41 0.0 0.0 0.0 0.25002071295248757 5.42697445088968E-4 42-43 0.0 0.0 0.0 0.3306112835481993 5.42697445088968E-4 44-45 0.0 0.0 0.0 0.4310826705490036 5.60787359925267E-4 46-47 0.0 0.0 0.0 0.5487575665591282 5.788772747615659E-4 48-49 0.0 0.0 0.0 0.6676263969484484 5.788772747615659E-4 50-51 0.0 0.0 0.0 0.7949974873108292 5.788772747615659E-4 52-53 0.0 0.0 0.0 0.925878021151452 6.150571044341638E-4 54-55 0.0 0.0 0.0 1.0825005038041282 6.512369341067616E-4 56-57 0.0 0.0 0.0 1.257918407971719 6.512369341067616E-4 58-59 0.0 0.0 0.0 1.4427611577690214 6.512369341067616E-4 60-61 0.0 0.0 0.0 1.6451692148723702 6.693268489430605E-4 62-63 0.0 0.0 0.0 1.8585759401961888 7.597764231245552E-4 64-65 0.0 0.0 0.0 2.0873048233863525 7.597764231245552E-4 66-67 0.0 0.0 0.0 2.359286692950107 7.597764231245552E-4 68-69 0.0 0.0 0.0 2.651981515001424 7.778663379608542E-4 70-71 0.0 0.0 0.0 2.957411637097495 8.683159121423488E-4 72-73 0.0 0.0 0.0 3.280895494200192 0.0012843839533772242 74-75 0.0 0.0 0.0 3.6277153414417156 0.0013024738682135232 76-77 0.0 0.0 0.0 4.018240422927737 0.0013024738682135232 78-79 0.0 0.0 0.0 4.451602422746114 0.0013024738682135232 80-81 0.0 0.0 0.0 4.898495678862043 0.001338653697886121 82-83 0.0 0.0 0.0 5.362809522965328 0.001374833527558719 84-85 0.0 0.0 0.0 5.856646108081453 0.001374833527558719 86-87 0.0 0.0 0.0 6.38360532726284 0.001374833527558719 88-89 0.0 0.0 0.0 6.949548312916452 0.0014291032720676158 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2845 0.0 58.550392 1 GTATCAA 4910 0.0 41.561565 1 TCAACGC 6240 0.0 32.70487 4 CAACGCA 6360 0.0 32.011436 5 TATCAAC 6505 0.0 31.226059 2 ATCAACG 6635 0.0 30.685219 3 AACGCAG 6695 0.0 30.611795 6 GTACATG 9835 0.0 29.48301 1 TACATGG 10250 0.0 27.642107 2 ACATGGG 10405 0.0 26.545671 3 ACGCAGA 7800 0.0 25.914413 7 CGCAGAG 8205 0.0 24.289616 8 CATGGGG 8935 0.0 24.168262 4 ATGGGGG 5850 0.0 22.390211 5 GCAGAGT 9025 0.0 21.13629 9 GAGTACA 7120 0.0 20.462719 1 CAGAGTA 8205 0.0 19.952185 10-11 GTATAGG 810 0.0 19.920439 1 GTGGTAT 1405 0.0 19.591002 1 AGAGTAC 7700 0.0 18.51841 10-11 >>END_MODULE