##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921418_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3581885 Sequences flagged as poor quality 0 Sequence length 101 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.460094335803635 31.0 31.0 34.0 26.0 34.0 2 30.503023687248476 33.0 31.0 34.0 26.0 34.0 3 30.557976875304483 33.0 31.0 34.0 26.0 34.0 4 34.01992889218945 37.0 35.0 37.0 30.0 37.0 5 34.011103650731386 37.0 35.0 37.0 30.0 37.0 6 34.05493392445598 37.0 35.0 37.0 30.0 37.0 7 33.97185923054481 37.0 35.0 37.0 30.0 37.0 8 33.939363770751996 37.0 35.0 37.0 30.0 37.0 9 35.49753188614375 39.0 37.0 39.0 30.0 39.0 10-11 35.38468306492252 39.0 37.0 39.0 30.0 39.0 12-13 35.26942838756688 39.0 35.0 39.0 29.0 39.0 14-15 36.40700776267245 40.0 37.0 41.0 29.0 41.0 16-17 36.348989707933114 40.0 37.0 41.0 28.0 41.0 18-19 36.2919906697172 40.0 37.0 41.0 27.5 41.0 20-21 36.228521714125385 40.0 37.0 41.0 27.0 41.0 22-23 36.10864447071863 40.0 36.0 41.0 27.0 41.0 24-25 36.0080888973264 40.0 36.0 41.0 27.0 41.0 26-27 35.85358952060159 40.0 36.0 41.0 27.0 41.0 28-29 35.71158593868871 40.0 36.0 41.0 26.5 41.0 30-31 35.56513832800327 40.0 36.0 41.0 26.0 41.0 32-33 35.383465409972686 39.5 35.0 41.0 25.0 41.0 34-35 35.22089053668669 39.0 35.0 41.0 25.0 41.0 36-37 35.05290803585263 39.0 35.0 41.0 24.0 41.0 38-39 35.29584715868879 39.0 35.0 41.0 25.0 41.0 40-41 35.42288264419433 40.0 35.0 41.0 25.0 41.0 42-43 35.25066480358805 40.0 35.0 41.0 24.0 41.0 44-45 35.128002713654965 40.0 35.0 41.0 24.0 41.0 46-47 34.9681179043995 40.0 35.0 41.0 23.0 41.0 48-49 34.81583705227834 39.0 35.0 41.0 22.5 41.0 50-51 33.08573083725469 37.0 32.5 39.5 18.5 40.0 52-53 33.241125971380995 37.5 33.0 39.5 19.0 40.0 54-55 34.096575825298686 38.5 34.0 40.5 20.0 41.0 56-57 34.09928180273794 38.5 34.0 41.0 20.0 41.0 58-59 33.90027359895697 38.0 34.0 40.5 18.5 41.0 60-61 33.64150147199031 37.5 34.0 40.0 18.0 41.0 62-63 33.338762411411864 37.0 33.5 40.0 15.0 41.0 64-65 33.0392421867257 36.5 33.0 40.0 13.0 41.0 66-67 32.68962417833068 36.0 33.0 39.0 10.0 41.0 68-69 32.31814561327346 35.5 33.0 39.0 7.5 41.0 70-71 31.941038308041712 35.0 32.0 38.5 6.0 40.0 72-73 31.584479819983052 35.0 32.0 37.0 2.0 39.5 74-75 31.19528125554003 35.0 32.0 37.0 2.0 39.0 76-77 30.836642019495322 35.0 32.0 36.0 2.0 39.0 78-79 30.50978102312051 35.0 31.0 36.0 2.0 37.5 80-81 30.17861544968641 35.0 31.0 35.5 2.0 37.0 82-83 29.902277990499414 35.0 31.0 35.0 2.0 37.0 84-85 29.678667238060406 35.0 31.0 35.0 2.0 36.0 86-87 29.46560205031708 35.0 31.0 35.0 2.0 36.0 88-89 29.2809932479686 35.0 31.0 35.0 2.0 36.0 90-91 29.036524344025562 34.5 30.0 35.0 2.0 35.0 92-93 28.846680448981473 34.0 30.0 35.0 2.0 35.0 94-95 28.64524656710084 34.0 30.0 35.0 2.0 35.0 96-97 28.39532034110531 34.0 30.0 35.0 2.0 35.0 98-99 28.17164635380533 34.0 30.0 35.0 2.0 35.0 100-101 27.105687787296354 33.0 27.0 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 121039.0 3 21176.0 4 14814.0 5 11151.0 6 10361.0 7 10645.0 8 11007.0 9 11644.0 10 12729.0 11 13217.0 12 13259.0 13 13581.0 14 14189.0 15 15330.0 16 15516.0 17 16671.0 18 15602.0 19 14263.0 20 14397.0 21 15308.0 22 16970.0 23 19402.0 24 22734.0 25 27003.0 26 32013.0 27 37765.0 28 45284.0 29 53506.0 30 63924.0 31 78544.0 32 98060.0 33 127933.0 34 181610.0 35 263393.0 36 437661.0 37 785313.0 38 776928.0 39 127935.0 40 8.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.76776762964382 17.654391887551053 12.551598037808114 25.02624244499701 2 16.361360458171614 19.26473981463738 38.908020964334824 25.465878762856185 3 19.772359522127616 23.465784237898237 28.641059137978374 28.12079710199577 4 13.822276004165493 14.960831176841285 35.507730968119674 35.70916185087354 5 14.804760449655127 37.05283498027745 33.47339201590094 14.669012554166482 6 34.47109735557055 33.91185346849604 16.9052044194452 14.711844756488212 7 30.177898103968975 31.24916233313676 20.226778757661858 18.346160805232405 8 27.69498448568193 34.27541768029112 19.371982861648917 18.65761497237804 9 27.916068169481 15.308645836358398 18.755542847186078 38.01974314697453 10-11 26.635108661915556 24.790732982224466 26.816112956509127 21.75804539935085 12-13 26.83732822630438 22.086001272847657 26.99093284541771 24.085737655430254 14-15 24.19177076705737 23.58253001515491 24.147752822483113 28.077946395304604 16-17 24.450734039493195 26.7133545758433 24.85513297047924 23.98077841418426 18-19 24.49039914417047 26.219106098232185 26.069612383055755 23.220882374541585 20-21 24.991011442102586 25.318174005355853 26.098876510548973 23.591938041992588 22-23 24.987675569025612 24.879779190886094 25.79568341867565 24.336861821412644 24-25 24.687116537001742 25.220904711186158 25.718705753598048 24.37327299821405 26-27 24.38556923408607 25.46042860885044 25.89399166776977 24.260010489293716 28-29 24.428708615494337 25.68483061683413 25.71403918471794 24.17242158295359 30-31 24.91676847668617 25.417351275351113 25.538476229646545 24.12740401831617 32-33 24.62638976529649 25.366099499098155 25.563305170401556 24.444205565203795 34-35 24.76218038091624 25.47431648629078 25.71375202653266 24.049751106260324 36-37 24.760758236625506 25.448687363495324 25.679630312602164 24.110924087277002 38-39 24.712212680343463 25.59211734965957 25.651294184392725 24.04437578560424 40-41 24.73141380456476 25.39078155473371 25.676045982364275 24.20175865833725 42-43 24.56498311298521 25.32197516523312 25.519479938136904 24.593561783644773 44-45 24.426184251487946 25.35378813073162 25.677878896284522 24.542148721495913 46-47 24.594179740630278 25.23463903972364 25.55651204016769 24.614669179478394 48-49 24.364467315032357 25.513710628105603 25.583373180798308 24.538448876063732 50-51 24.452846601811398 25.463380455031132 25.693818983312543 24.389953959844927 52-53 24.644192755561566 25.31247163465109 25.66854111652167 24.37479449326567 54-55 24.234740937008528 25.204336445879388 25.863502512903676 24.697420104208405 56-57 24.29897051560382 25.30638284242095 25.64642978683109 24.748216855144143 58-59 24.442857712322358 25.28553835093464 25.791639071747724 24.47996486499528 60-61 24.682877593065864 25.30823331413774 25.775249884217992 24.2336392085784 62-63 24.536150016462916 25.270393244078313 25.85062359061639 24.34283314884238 64-65 24.331856729829116 25.014078321064048 25.918154110408164 24.73591083869867 66-67 24.39928050862854 25.22864522225086 25.637397551430052 24.734676717690547 68-69 24.24294044402823 25.284361922879455 25.7590804979657 24.713617135126615 70-71 24.299588825863193 25.05741671220663 25.82939601422301 24.813598447707164 72-73 24.28904681866168 25.372728357170338 25.586077591939382 24.752147232228598 74-75 24.133753019970545 25.40237838587714 25.770061023123226 24.69380757102909 76-77 24.16123694345774 25.010806306380008 25.814787110520232 25.01316963964202 78-79 24.095211571556323 24.96930010391595 25.88582785929369 25.049660465234037 80-81 24.27466027755267 25.25196865484334 25.602718031382928 24.870653036221064 82-83 24.35832459851179 25.15975525806414 25.745129354861678 24.73679078856239 84-85 24.331020486896534 25.20832893289621 25.60374580128358 24.85690477892367 86-87 24.005975041317296 25.35622133619149 25.74942292892026 24.888380693570955 88-89 24.018199015957087 25.06193812720704 25.866360822170662 25.053502034665204 90-91 24.230871358752662 24.91379978494365 25.910484962423897 24.944843893879792 92-93 24.4389999100402 24.808366737146837 25.853621273716055 24.89901207909691 94-95 24.353635212068323 24.75030352842967 25.887137656596813 25.0089236029052 96-97 24.177022131614333 24.69904670488429 25.980587088748937 25.143344074752445 98-99 23.997586857664196 24.66247416763868 25.94291703969779 25.397021934999337 100-101 24.272715163143065 24.643101805884992 25.998634924224024 25.08554810674792 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 81.0 1 72.0 2 82.0 3 123.0 4 128.0 5 151.5 6 264.5 7 502.5 8 738.5 9 822.5 10 754.5 11 665.0 12 719.0 13 816.5 14 901.5 15 981.0 16 1096.0 17 1252.5 18 1376.0 19 1480.0 20 1605.0 21 1749.0 22 1832.5 23 1960.0 24 2222.5 25 2600.0 26 3239.5 27 4186.0 28 5519.0 29 7819.0 30 11305.5 31 15554.0 32 21592.5 33 28783.0 34 36470.0 35 44776.5 36 56121.0 37 67507.0 38 75738.5 39 83794.5 40 89856.0 41 94916.0 42 100448.5 43 108794.0 44 118321.5 45 126650.5 46 133797.0 47 140063.5 48 147510.0 49 153323.5 50 156076.5 51 157144.0 52 157366.5 53 157470.5 54 157105.0 55 152869.5 56 144111.0 57 131890.0 58 119927.0 59 106786.0 60 90462.0 61 75908.0 62 62770.5 63 49264.5 64 36881.0 65 27772.0 66 21375.5 67 16682.0 68 13091.5 69 10161.5 70 7975.0 71 6182.5 72 4862.0 73 4073.0 74 3264.0 75 2550.5 76 2017.5 77 1378.0 78 866.5 79 614.0 80 437.0 81 305.0 82 219.0 83 170.0 84 136.5 85 110.5 86 95.0 87 83.5 88 73.5 89 60.0 90 52.5 91 49.5 92 37.0 93 28.5 94 23.5 95 18.5 96 15.0 97 15.5 98 15.5 99 9.5 100 7.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.05044829747465371 2 0.05837708357470996 3 0.049303648777110375 4 0.05575276704863501 5 0.0479914905140729 6 0.017337240028644136 7 0.014210394806086738 8 0.018900662639922832 9 0.01934735481457389 10-11 0.02106432786088889 12-13 0.026187328738918193 14-15 0.04263118441826022 16-17 0.028337034829426407 18-19 0.02227877221072145 20-21 0.026340879173954494 22-23 0.04461338094327428 24-25 0.04016041832722156 26-27 0.030458822659018926 28-29 0.020771186121274134 30-31 0.012828440890760032 32-33 0.009631800015913409 34-35 0.009394494798130034 36-37 0.00134007652395317 38-39 0.006895810446175687 40-41 0.0033641504403407706 42-43 0.21053160556522613 44-45 0.1857122716111768 46-47 0.19186824814308667 48-49 0.18966270553074707 50-51 0.18830866987633607 52-53 0.1920915942304122 54-55 0.19089110901103748 56-57 0.20189090381181976 58-59 0.1982894481536956 60-61 0.20323098033577291 62-63 0.20056478641832443 64-65 0.20212820902960313 66-67 0.19150531075118268 68-69 0.19038858031455505 70-71 0.17507541420229852 72-73 0.18220852986625757 74-75 0.18199914290938987 76-77 0.1794167037746885 78-79 0.2055202777308596 80-81 0.21442620296296505 82-83 0.21188564121963713 84-85 0.20741871947312657 86-87 0.2238625751524686 88-89 0.22210372471478007 90-91 0.2216151551487555 92-93 0.22520265167642176 94-95 0.23720750387016895 96-97 0.23702603517421691 98-99 0.2267381560267848 100-101 0.23610473256399914 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3581885.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.50988368592563 #Duplication Level Percentage of deduplicated Percentage of total 1 75.40213541260783 40.34759495599059 2 13.036212642391648 13.951324443987403 3 4.561292549849847 7.322227013998332 4 2.1464393406957183 4.594228778380911 5 1.1784989169100595 3.15306699839233 6 0.7463802332252578 2.3963231679214556 7 0.5075719703664758 1.9012081967582344 8 0.37429455590210475 1.602276652047745 9 0.29746041132623646 1.4325364810111059 >10 1.605694608602309 15.79174049971156 >50 0.10575680759094938 3.858740233891074 >100 0.03747660174881156 3.2626862796592895 >500 5.239658569242356E-4 0.1726540138122198 >1k 2.619829259005707E-4 0.21339228443773578 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.791826091569104E-5 2 0.0 0.0 0.0 0.0 2.791826091569104E-5 3 0.0 0.0 0.0 0.0 2.791826091569104E-5 4 0.0 0.0 0.0 0.0 2.791826091569104E-5 5 0.0 0.0 0.0 0.0 2.791826091569104E-5 6 0.0 0.0 0.0 0.0 2.791826091569104E-5 7 0.0 0.0 0.0 0.0 2.791826091569104E-5 8 0.0 0.0 0.0 0.0 5.583652183138208E-5 9 0.0 0.0 0.0 0.0 5.583652183138208E-5 10-11 0.0 0.0 0.0 2.791826091569104E-5 5.583652183138208E-5 12-13 0.0 0.0 0.0 5.583652183138208E-5 8.375478274707312E-5 14-15 0.0 0.0 0.0 5.583652183138208E-5 8.375478274707312E-5 16-17 0.0 0.0 0.0 5.583652183138208E-5 1.1167304366276416E-4 18-19 0.0 0.0 0.0 1.5355043503630073E-4 1.1167304366276416E-4 20-21 0.0 0.0 0.0 1.954278264098373E-4 1.5355043503630073E-4 22-23 0.0 0.0 0.0 2.791826091569104E-4 1.8146869595199176E-4 24-25 0.0 1.395913045784552E-5 0.0 6.281608706030484E-4 1.954278264098373E-4 26-27 0.0 2.791826091569104E-5 0.0 0.0010748530452541051 2.5126434824121935E-4 28-29 0.0 2.791826091569104E-5 0.0 0.0038806382672810546 2.5126434824121935E-4 30-31 0.0 2.791826091569104E-5 0.0 0.013847457414182755 2.791826091569104E-4 32-33 0.0 2.791826091569104E-5 0.0 0.03542827310201193 3.629373919039835E-4 34-35 0.0 2.791826091569104E-5 0.0 0.06450514184570415 3.908556528196746E-4 36-37 0.0 2.791826091569104E-5 0.0 0.110332967138811 4.187739137353656E-4 38-39 0.0 2.791826091569104E-5 0.0 0.1839394620430304 4.187739137353656E-4 40-41 0.0 2.791826091569104E-5 0.0 0.2672615117459103 4.187739137353656E-4 42-43 0.0 2.791826091569104E-5 0.0 0.3549806875430116 4.187739137353656E-4 44-45 0.0 2.791826091569104E-5 0.0 0.4592833103240333 4.327330441932111E-4 46-47 0.0 2.791826091569104E-5 0.0 0.5808115000900365 5.304469573981297E-4 48-49 0.0 4.187739137353656E-5 0.0 0.7093611324763358 5.862834792295118E-4 50-51 0.0 5.583652183138208E-5 0.0 0.8450857579179678 5.862834792295118E-4 52-53 0.0 5.583652183138208E-5 0.0 0.9893394120693433 6.560791315187394E-4 54-55 0.0 8.375478274707312E-5 0.0 1.155997470605561 7.817113056393492E-4 56-57 0.0 8.375478274707312E-5 0.0 1.344068835264114 8.235886970128857E-4 58-59 0.0 8.375478274707312E-5 0.0 1.5447452947261011 8.515069579285767E-4 60-61 0.0 8.375478274707312E-5 0.0 1.7617539368237674 8.933843493021133E-4 62-63 0.0 8.375478274707312E-5 0.0 1.9816939963175813 0.0010050573929648774 64-65 0.0 8.375478274707312E-5 0.0 2.226718613244144 0.001019016523422723 66-67 0.0 8.375478274707312E-5 0.0 2.509837697190167 0.001046934784338414 68-69 0.0 8.375478274707312E-5 0.0 2.8181669707430586 0.0010888121757119506 70-71 0.0 8.375478274707312E-5 0.0 3.1448385417175593 0.0011167304366276416 72-73 0.0 8.375478274707312E-5 0.0 3.4842827170609887 0.0011586078280011781 74-75 0.0 8.375478274707312E-5 0.0 3.843102165479908 0.0012004852193747148 76-77 0.0 8.375478274707312E-5 0.0 4.24071403744118 0.0012284034802904058 78-79 0.0 1.1167304366276416E-4 0.0 4.68563340252409 0.0012284034802904058 80-81 0.0 1.1167304366276416E-4 0.0 5.1526361119913116 0.0012423626107482513 82-83 0.0 1.1167304366276416E-4 0.0 5.629158948430785 0.0012842400021217878 84-85 0.0 1.1167304366276416E-4 0.0 6.133460454481369 0.0012842400021217878 86-87 0.0 1.1167304366276416E-4 0.0 6.671249914500326 0.0013121582630374789 88-89 0.0 1.1167304366276416E-4 0.0 7.262209702433216 0.0013400765239531699 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 3165 0.0 54.129776 1 GTATCAA 6105 0.0 45.630493 1 TCAACGC 7575 0.0 36.465275 4 CAACGCA 7775 0.0 35.40171 5 ATCAACG 8135 0.0 33.8953 3 TATCAAC 8170 0.0 33.867695 2 AACGCAG 8370 0.0 32.875 6 GTACATG 13705 0.0 29.849081 1 TACATGG 14565 0.0 27.893461 2 ACGCAGA 9915 0.0 27.132889 7 GTATAGG 1270 0.0 26.904907 1 ACATGGG 15150 0.0 26.314045 3 CGCAGAG 10295 0.0 25.672304 8 CATGGGG 12180 0.0 24.821688 4 GCAGAGT 11540 0.0 21.545744 9 GAGTACA 10190 0.0 21.330154 1 GTATATG 980 0.0 20.823088 1 GTATACG 185 6.6097364E-6 20.52206 1 AGTACAT 10115 0.0 20.129387 2 ATGGGGG 7295 0.0 20.03651 5 >>END_MODULE