##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921418_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3581885 Sequences flagged as poor quality 0 Sequence length 101 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.416539056949066 33.0 31.0 34.0 29.0 34.0 2 31.542309984826424 34.0 31.0 34.0 29.0 34.0 3 31.623362838282077 34.0 31.0 34.0 28.0 34.0 4 35.110348880547534 37.0 35.0 37.0 33.0 37.0 5 34.846080485554396 37.0 35.0 37.0 32.0 37.0 6 34.80011362732193 37.0 35.0 37.0 32.0 37.0 7 34.66049803385648 37.0 35.0 37.0 32.0 37.0 8 34.62766197128048 37.0 35.0 37.0 32.0 37.0 9 36.248895762985136 39.0 37.0 39.0 32.0 39.0 10-11 36.0963903084549 39.0 37.0 39.0 32.0 39.0 12-13 36.023207752342685 39.0 37.0 39.0 31.0 39.0 14-15 37.26086892795274 40.0 38.0 41.0 31.0 41.0 16-17 37.23210879187914 40.0 38.0 41.0 31.0 41.0 18-19 37.189156407869035 40.0 38.0 41.0 31.0 41.0 20-21 37.14615614404147 40.0 38.0 41.0 31.0 41.0 22-23 37.03506128756227 40.0 38.0 41.0 31.0 41.0 24-25 36.962627080433904 40.0 37.0 41.0 30.5 41.0 26-27 36.8250953059632 40.0 37.0 41.0 30.0 41.0 28-29 36.66806625561681 40.0 37.0 41.0 30.0 41.0 30-31 36.53038079111976 40.0 37.0 41.0 30.0 41.0 32-33 36.48685552439567 40.0 36.5 41.0 30.0 41.0 34-35 36.62887180911727 40.0 37.0 41.0 30.0 41.0 36-37 36.612464247177115 40.0 37.0 41.0 30.0 41.0 38-39 36.52603377830388 40.0 37.0 41.0 30.0 41.0 40-41 36.402431959708366 40.0 36.5 41.0 30.0 41.0 42-43 36.30365980482344 40.0 36.0 41.0 29.5 41.0 44-45 36.16689969108444 40.0 36.0 41.0 29.0 41.0 46-47 36.00570174642681 40.0 36.0 41.0 28.0 41.0 48-49 35.84352373121973 40.0 35.0 41.0 28.0 41.0 50-51 35.680408639585025 39.5 35.0 41.0 27.5 41.0 52-53 35.50072419968815 39.0 35.0 41.0 27.0 41.0 54-55 35.282693330467055 39.0 35.0 41.0 26.5 41.0 56-57 35.004878576503714 39.0 35.0 41.0 26.0 41.0 58-59 34.77045103346423 38.0 35.0 40.0 26.0 41.0 60-61 34.48210648862261 38.0 34.0 40.0 26.0 41.0 62-63 34.16994180438512 37.0 34.0 40.0 25.5 41.0 64-65 33.84453856000402 37.0 34.0 39.5 25.0 41.0 66-67 33.50035023458319 36.0 34.0 39.0 23.5 41.0 68-69 33.13375122316881 35.5 33.5 39.0 23.0 40.5 70-71 32.757707045312735 35.0 33.0 38.5 22.5 40.0 72-73 32.36692858648449 35.0 33.0 37.0 21.5 39.5 74-75 31.97156776390085 35.0 33.0 37.0 20.5 39.0 76-77 29.249128461689864 33.0 28.5 34.5 14.0 36.5 78-79 30.91941072926685 34.5 31.5 35.5 18.0 37.0 80-81 31.126463161156764 35.0 32.0 35.0 19.0 37.0 82-83 30.983287431059345 35.0 32.0 35.0 18.0 37.0 84-85 30.768816279696303 35.0 32.0 35.0 17.0 36.0 86-87 30.541782190103817 35.0 32.0 35.0 12.0 36.0 88-89 30.282688444771395 35.0 32.0 35.0 7.0 35.5 90-91 30.112133834559177 35.0 32.0 35.0 3.5 35.0 92-93 29.979093689495894 34.0 31.0 35.0 2.0 35.0 94-95 29.883073158406816 34.0 31.0 35.0 2.0 35.0 96-97 29.702226481308024 34.0 31.0 35.0 2.0 35.0 98-99 29.443680631846078 34.0 31.0 35.0 2.0 35.0 100-101 28.34325222613233 33.0 29.0 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 67382.0 3 23457.0 4 12895.0 5 9232.0 6 7948.0 7 8200.0 8 8136.0 9 8609.0 10 9630.0 11 10217.0 12 10917.0 13 11569.0 14 12124.0 15 13264.0 16 14491.0 17 15789.0 18 14879.0 19 12972.0 20 12797.0 21 12419.0 22 13257.0 23 15207.0 24 17524.0 25 21517.0 26 25809.0 27 31295.0 28 37674.0 29 45612.0 30 55444.0 31 70402.0 32 89156.0 33 118567.0 34 173688.0 35 261249.0 36 458208.0 37 882423.0 38 866183.0 39 101739.0 40 4.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.81188838561762 18.985796566571604 13.089582284851534 26.112732762959233 2 15.44366058967506 20.386831351547833 37.43909258596973 26.730415472807366 3 18.37881408128405 24.341018220033046 28.477868654272793 28.802299044410105 4 13.41113707919627 15.94481687288354 34.516703720279516 36.12734232764067 5 14.611980661866388 37.3324724706387 33.50469602089305 14.550850846601865 6 34.58221624019603 34.3186925382785 16.60176987197366 14.49732134955181 7 30.054817505307955 31.29910647605939 20.201206906419387 18.44486911221326 8 27.707694287766703 34.568946287088835 19.149967377093162 18.573392048051293 9 27.607028143002914 15.179186378122134 18.69979075263444 38.51399472624051 10-11 26.55620908877249 24.946546249127035 26.783088856887588 21.714155805212883 12-13 26.73097647045686 22.112493997565526 27.058318536634392 24.098210995343226 14-15 24.07074622986117 23.640884304141725 24.125733601192607 28.162635864804496 16-17 24.37280178409004 26.86589061281192 24.76647751098445 23.994830092113588 18-19 24.48399574021926 26.305444258306647 25.999152119930503 23.21140788154359 20-21 24.94497272366871 25.35090707062811 26.02746896863641 23.676651237066775 22-23 24.851219744734358 24.956360164846554 25.76847638381725 24.423943706601833 24-25 24.564192197526094 25.33872741706708 25.705844687297024 24.391235698109803 26-27 24.286748880382312 25.52927952765688 25.839290993949138 24.344680598011674 28-29 24.33707315867848 25.78925745185875 25.68801985999003 24.185649529472744 30-31 24.859387519159835 25.477179153151763 25.48605839834891 24.1773749293395 32-33 24.574490675324025 25.493995408758817 25.485618760007476 24.445895155909678 34-35 24.650713845158993 25.539373098397633 25.760661886758108 24.049251169685267 36-37 24.60904755809235 25.561736543973012 25.717786687173692 24.11142921076094 38-39 24.616720183713557 25.695846078617084 25.587941864615527 24.099491873053832 40-41 24.69351231674256 25.44797038286182 25.626488465006936 24.232028835388682 42-43 24.428768887066603 25.412467582434534 25.4989516511477 24.659811879351164 44-45 24.32223216969328 25.41039367554899 25.633953509215107 24.633420645542632 46-47 24.484994112902168 25.35880304705127 25.520199153385914 24.636003686660647 48-49 24.2783408509288 25.56169065554205 25.578136340874103 24.58183215265505 50-51 24.352038448845715 25.502415895941976 25.67215401427369 24.473391640938615 52-53 24.55843800515379 25.404848918011186 25.563343318917987 24.473369757917045 54-55 24.109865664278793 25.246178856885848 25.83146348797143 24.81249199086393 56-57 24.1899867938699 25.359957785055578 25.583247479527703 24.86680794154682 58-59 24.316890571402762 25.389458265991593 25.702367874427395 24.591283288178246 60-61 24.56752322315518 25.466127858474763 25.661347408573548 24.305001509796504 62-63 24.39124607329843 25.353075043630017 25.767650959860383 24.48802792321117 64-65 24.142215986312152 25.14632287116368 25.796071125308234 24.915390017215934 66-67 24.197945512786053 25.428688448016345 25.486960780192934 24.88640525900467 68-69 24.037590740965697 25.43096984446799 25.582969252443842 24.94847016212246 70-71 24.089908967156788 25.14933810291733 25.69471404001602 25.06603888990986 72-73 24.075127733371275 25.462242402215363 25.429863128804026 25.03276673560934 74-75 23.852064289035372 25.522275109152016 25.539365235833973 25.08629536597864 76-77 23.81947448747446 25.098052987789828 25.708197778249136 25.374274746486574 78-79 23.729901192459522 25.10174158120281 25.71135995476507 25.4569972715726 80-81 23.912517917125985 25.414029987783604 25.37375093382741 25.299701161263005 82-83 23.933469173596205 25.308453920188583 25.542693205873952 25.21538370034126 84-85 23.86598732774491 25.2757533646714 25.410781470625032 25.447477836958658 86-87 23.48150186706602 25.461877068406004 25.551186107296576 25.505434957231405 88-89 23.487265035193552 25.137313982185955 25.68850120040837 25.686919782212126 90-91 23.616720386897676 24.97674301380297 25.77172308924466 25.634813510054695 92-93 23.71533028578196 24.877742279496175 25.681229962386965 25.725697472334897 94-95 23.58862186574465 24.844055021732625 25.69801815444681 25.86930495807592 96-97 23.314689131847523 24.833308553507322 25.778418097788876 26.073584216856283 98-99 23.079805123404583 24.790901031350643 25.765242130721877 26.3640517145229 100-101 23.083424906584117 24.862137587692555 25.80673800446252 26.247699501260808 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 75.0 1 59.0 2 61.5 3 101.0 4 102.0 5 105.0 6 191.0 7 409.0 8 597.0 9 649.0 10 573.0 11 451.0 12 437.5 13 493.0 14 542.5 15 600.5 16 673.5 17 736.0 18 847.5 19 955.0 20 1014.0 21 1127.0 22 1296.5 23 1495.0 24 1774.0 25 2216.5 26 2985.0 27 4042.5 28 5518.0 29 7876.0 30 11549.0 31 15903.0 32 21683.0 33 28817.0 34 36504.5 35 44806.5 36 56164.0 37 67469.5 38 75254.0 39 83367.0 40 89583.5 41 94043.0 42 100006.5 43 108827.5 44 118573.5 45 127460.0 46 134681.5 47 141478.5 48 149656.0 49 155270.5 50 157515.5 51 158764.5 52 159155.5 53 159248.0 54 158485.0 55 153602.5 56 144812.0 57 133449.0 58 121345.5 59 107016.5 60 90557.0 61 75824.5 62 62339.5 63 48537.0 64 35844.0 65 26587.5 66 20348.0 67 15803.5 68 12322.0 69 9583.5 70 7451.0 71 5831.0 72 4560.0 73 3787.0 74 3030.5 75 2321.5 76 1737.0 77 1116.0 78 662.0 79 402.0 80 262.0 81 174.5 82 108.0 83 60.5 84 47.0 85 32.5 86 20.0 87 18.0 88 16.0 89 9.5 90 9.0 91 8.5 92 5.5 93 4.0 94 2.5 95 1.5 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.14754800893942716 2 3.908556528196745E-4 3 0.006225772184199101 4 0.0038527200063653635 5 0.02738781395829291 6 0.0012284034802904058 7 0.0 8 0.0012842400021217878 9 0.0 10-11 0.09933317233802871 12-13 1.395913045784552E-4 14-15 0.0042854530505585745 16-17 8.375478274707313E-5 18-19 2.931417396147559E-4 20-21 6.97956522892276E-4 22-23 2.3730521778337382E-4 24-25 0.001661136524483617 26-27 0.0022892973950866652 28-29 0.005904712183668655 30-31 0.013945171327387675 32-33 0.013973089588303365 34-35 0.01021808349514292 36-37 6.560791315187394E-4 38-39 1.2563217412060967E-4 40-41 0.004885695660245932 42-43 0.008389437405165158 44-45 0.00819400957875532 46-47 0.009045516536683897 48-49 0.01112542697490288 50-51 0.005332387834896989 52-53 0.001535504350363007 54-55 0.0010608939147962594 56-57 0.006002426096873573 58-59 0.009478249580877108 60-61 0.007719399143188573 62-63 0.01772809568146381 64-65 0.03323668962013018 66-67 0.03583308788528945 68-69 0.02652234786990649 70-71 0.03961601223936559 72-73 0.024861211345422872 74-75 0.024288886996651205 76-77 0.23191699342664548 78-79 0.0656218722823318 80-81 0.05194192443364318 82-83 0.020045311337466166 84-85 0.032078081792129 86-87 0.07649603490899344 88-89 0.2552427004217053 90-91 0.3047278178947677 92-93 0.048661528776049484 94-95 0.00482985913841455 96-97 0.00956200436362418 98-99 7.956704360971945E-4 100-101 0.001479667828531625 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3581885.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.65929117082734 #Duplication Level Percentage of deduplicated Percentage of total 1 74.55101112954642 39.258034021503754 2 13.50971764437723 14.228243101418487 3 4.720335968081002 7.457086385019197 4 2.1848261750378977 4.602055908358625 5 1.2336440449160124 3.2481410481194755 6 0.7671947352712891 2.423995856962597 7 0.5451881290484247 2.0096454301307713 8 0.38107603878966584 1.6053755267880405 9 0.2947683602320484 1.3970063618466082 >10 1.6609475026290355 16.04902891603352 >50 0.11017181750842932 3.9585533377565154 >100 0.040319876885239525 3.3868844505642253 >500 5.323851222254353E-4 0.17482640384661355 >1k 2.661925550992837E-4 0.20112325165145042 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 2.791826091569104E-5 0.0 7 0.0 0.0 0.0 2.791826091569104E-5 0.0 8 0.0 0.0 0.0 2.791826091569104E-5 0.0 9 0.0 0.0 0.0 8.375478274707312E-5 2.791826091569104E-5 10-11 0.0 1.395913045784552E-5 0.0 9.771391320491864E-5 4.187739137353656E-5 12-13 0.0 2.791826091569104E-5 0.0 1.6750956549414623E-4 1.8146869595199176E-4 14-15 0.0 2.791826091569104E-5 0.0 1.6750956549414623E-4 2.9314173961475596E-4 16-17 0.0 2.791826091569104E-5 0.0 1.6750956549414623E-4 3.908556528196746E-4 18-19 0.0 5.583652183138208E-5 0.0 1.8146869595199176E-4 4.187739137353656E-4 20-21 0.0 8.375478274707312E-5 0.0 1.954278264098373E-4 4.746104355667477E-4 22-23 0.0 8.375478274707312E-5 0.0 2.791826091569104E-4 4.885695660245932E-4 24-25 0.0 8.375478274707312E-5 0.0 6.281608706030484E-4 5.304469573981298E-4 26-27 0.0 8.375478274707312E-5 0.0 0.0011027713061697961 5.304469573981298E-4 28-29 0.0 8.375478274707312E-5 0.0 0.0039643930500281276 5.304469573981298E-4 30-31 0.0 8.375478274707312E-5 0.0 0.014098721762423974 5.304469573981298E-4 32-33 0.0 8.375478274707312E-5 0.0 0.03620998440765128 5.304469573981298E-4 34-35 0.0 8.375478274707312E-5 0.0 0.0655939540214161 5.304469573981298E-4 36-37 0.0 8.375478274707312E-5 0.0 0.11210577670695737 5.304469573981298E-4 38-39 0.0 8.375478274707312E-5 0.0 0.1864521055254426 5.444060878559753E-4 40-41 0.0 8.375478274707312E-5 0.0 0.27002541957656373 5.583652183138208E-4 42-43 0.0 8.375478274707312E-5 0.0 0.3575491675472552 5.862834792295118E-4 44-45 0.0 8.375478274707312E-5 0.0 0.46199138163285536 6.002426096873574E-4 46-47 0.0 9.771391320491864E-5 0.0 0.583561448790232 6.281608706030484E-4 48-49 0.0 1.1167304366276416E-4 0.0 0.7130463429172069 6.421200010608939E-4 50-51 0.0 1.1167304366276416E-4 0.0 0.8484499083583086 6.700382619765849E-4 52-53 0.0 1.1167304366276416E-4 0.0 0.9929967042492989 6.839973924344304E-4 54-55 0.0 1.1167304366276416E-4 0.0 1.160143332351541 7.119156533501215E-4 56-57 0.0 1.1167304366276416E-4 0.0 1.3487730622284078 7.398339142658125E-4 58-59 0.0 1.1167304366276416E-4 0.0 1.5495053582122262 7.53793044723658E-4 60-61 0.0 1.1167304366276416E-4 0.0 1.7676446898769782 7.53793044723658E-4 62-63 0.0 1.1167304366276416E-4 0.0 1.9890923354602394 8.096295665550402E-4 64-65 0.0 1.1167304366276416E-4 0.0 2.234731154126947 8.235886970128857E-4 66-67 0.0 1.1167304366276416E-4 0.0 2.518464439813115 8.375478274707312E-4 68-69 0.0 1.1167304366276416E-4 0.0 2.826765795105091 8.375478274707312E-4 70-71 2.791826091569104E-5 1.1167304366276416E-4 0.0 3.1553637260827747 8.375478274707312E-4 72-73 2.791826091569104E-5 1.1167304366276416E-4 0.0 3.4963852831679407 8.794252188442678E-4 74-75 2.791826091569104E-5 1.1167304366276416E-4 0.0 3.8581082307220917 8.933843493021133E-4 76-77 2.791826091569104E-5 1.1167304366276416E-4 0.0 4.259796168777054 8.933843493021133E-4 78-79 2.791826091569104E-5 1.1167304366276416E-4 0.0 4.708903272997318 9.213026102178043E-4 80-81 2.791826091569104E-5 1.1167304366276416E-4 0.0 5.180666045950666 9.771391320491864E-4 82-83 2.791826091569104E-5 1.1167304366276416E-4 0.0 5.662479392833662 0.0010888121757119506 84-85 2.791826091569104E-5 1.1167304366276416E-4 0.0 6.173718586721796 0.0010888121757119506 86-87 2.791826091569104E-5 1.1167304366276416E-4 0.0 6.71716149457618 0.0011865260889168693 88-89 2.791826091569104E-5 1.1167304366276416E-4 0.0 7.315100847737993 0.0012284034802904058 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 3060 0.0 55.925888 1 GTATCAA 5530 0.0 44.6143 1 TCAACGC 7340 0.0 33.302387 4 CAACGCA 7665 0.0 31.637285 5 TATCAAC 7950 0.0 30.926651 2 ATCAACG 7975 0.0 30.650723 3 AACGCAG 8025 0.0 30.214237 6 GTACATG 13930 0.0 28.153648 1 TACATGG 14360 0.0 26.740181 2 ACATGGG 15005 0.0 25.27406 3 CATGGGG 12410 0.0 23.674623 4 ACGCAGA 10210 0.0 23.468166 7 CGCAGAG 10690 0.0 22.192038 8 ATGGGGG 7130 0.0 21.60711 5 GAGTACA 10555 0.0 19.726395 1 GTATAGG 1075 0.0 19.457006 1 GCAGAGT 12015 0.0 18.55767 9 AGTACAT 10565 0.0 18.509642 2 TGGGGGG 5465 0.0 18.18204 6 AGAGTAC 10395 0.0 17.310743 10-11 >>END_MODULE