##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921416_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1773696 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.633327808147506 31.0 31.0 34.0 27.0 34.0 2 30.70108970195569 33.0 31.0 34.0 27.0 34.0 3 30.73247839539583 33.0 31.0 34.0 27.0 34.0 4 34.20260574529119 37.0 35.0 37.0 30.0 37.0 5 34.19542187612759 37.0 35.0 37.0 30.0 37.0 6 34.24265093905607 37.0 35.0 37.0 30.0 37.0 7 34.16917329688966 37.0 35.0 37.0 30.0 37.0 8 34.134471747131414 37.0 35.0 37.0 30.0 37.0 9 35.72007097044815 39.0 37.0 39.0 30.0 39.0 10-11 35.62305772804359 39.0 37.0 39.0 30.0 39.0 12-13 35.51450981453417 39.0 37.0 39.0 30.0 39.0 14-15 36.66854974020351 40.0 37.0 41.0 30.0 41.0 16-17 36.611946466587284 40.0 37.0 41.0 30.0 41.0 18-19 36.57150802617811 40.0 37.0 41.0 30.0 41.0 20-21 36.51089645576243 40.0 37.0 41.0 29.0 41.0 22-23 36.39404525916504 40.0 37.0 41.0 29.0 41.0 24-25 36.2926231439886 40.0 37.0 41.0 28.5 41.0 26-27 36.14132297755647 40.0 36.0 41.0 27.5 41.0 28-29 35.99807858843906 40.0 36.0 41.0 27.0 41.0 30-31 35.83962781671718 40.0 36.0 41.0 27.0 41.0 32-33 35.645269256963985 40.0 35.5 41.0 26.5 41.0 34-35 35.470019665151185 39.5 35.0 41.0 25.5 41.0 36-37 35.29012356119651 39.0 35.0 41.0 25.0 41.0 38-39 35.51604305360107 39.5 35.0 41.0 26.0 41.0 40-41 35.62504031130476 40.0 35.0 41.0 26.0 41.0 42-43 35.44479493667461 40.0 35.0 41.0 25.0 41.0 44-45 35.300833119091436 40.0 35.0 41.0 24.0 41.0 46-47 35.1128902585336 40.0 35.0 41.0 23.5 41.0 48-49 34.93962916982392 39.5 35.0 41.0 23.0 41.0 50-51 33.20684604351591 37.0 32.5 39.5 18.5 40.0 52-53 33.36207219275457 37.5 33.5 39.5 19.5 40.0 54-55 34.21121460498304 39.0 34.0 40.5 20.5 41.0 56-57 34.205376795121595 39.0 34.0 41.0 20.0 41.0 58-59 34.016482813289315 38.0 34.0 41.0 19.5 41.0 60-61 33.764181404254174 38.0 34.0 40.0 18.0 41.0 62-63 33.46740873295086 37.0 34.0 40.0 17.0 41.0 64-65 33.16878653388179 37.0 34.0 40.0 13.5 41.0 66-67 32.81852160685935 36.0 33.0 39.0 11.5 41.0 68-69 32.444430443548384 35.5 33.0 39.0 7.5 41.0 70-71 32.06622386248827 35.0 33.0 38.5 6.5 40.5 72-73 31.714047672205382 35.0 32.5 37.0 2.0 40.0 74-75 31.320667972414665 35.0 32.0 37.0 2.0 39.0 76-77 30.949124314425923 35.0 32.0 36.5 2.0 39.0 78-79 30.617407379844124 35.0 32.0 36.0 2.0 38.0 80-81 30.282568997167495 35.0 31.5 35.5 2.0 37.0 82-83 29.995537566753264 35.0 31.0 35.0 2.0 37.0 84-85 29.776549081691563 35.0 31.0 35.0 2.0 36.0 86-87 29.56332370372375 35.0 31.0 35.0 2.0 36.0 88-89 29.369935998051524 35.0 31.0 35.0 2.0 36.0 90-91 29.11757398111063 35.0 31.0 35.0 2.0 35.5 92-93 28.931367043732408 35.0 30.5 35.0 2.0 35.0 94-95 28.734706229252364 34.0 30.0 35.0 2.0 35.0 96-97 28.485644947048424 34.0 30.0 35.0 2.0 35.0 98-99 28.258420552338166 34.0 30.0 35.0 2.0 35.0 100-101 27.22773547439922 33.5 27.5 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 55558.0 3 9582.0 4 6712.0 5 5128.0 6 4828.0 7 4779.0 8 5145.0 9 5548.0 10 6123.0 11 6408.0 12 6567.0 13 6701.0 14 7326.0 15 8233.0 16 8729.0 17 9745.0 18 8565.0 19 7316.0 20 7119.0 21 7654.0 22 8318.0 23 9270.0 24 11062.0 25 12889.0 26 15386.0 27 17888.0 28 21489.0 29 25537.0 30 30523.0 31 37264.0 32 46407.0 33 60957.0 34 87278.0 35 128184.0 36 214406.0 37 388527.0 38 400622.0 39 69914.0 40 9.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.66463025954319 18.40855629452878 13.810732598872924 24.11608084705511 2 17.101305213180307 19.84283960590866 37.80040889458553 25.2554462863255 3 19.59881992587871 23.521607427923534 29.17987104926189 27.699701596935867 4 14.416006201015112 16.255268352426615 34.81831623710308 34.5104092094552 5 15.381547603266533 36.33754464066626 33.089796910705125 15.19111084536208 6 33.93857678409506 33.54660368931776 17.072681093712642 15.442138432874536 7 29.218168489906393 31.57730912371715 20.43024698319612 18.774275403180333 8 27.3743665742962 33.168498850162464 19.77534464110294 19.681789934438395 9 27.292649187638553 15.53380812017457 19.379209344003538 37.79433334818334 10-11 26.214429920034288 25.030452387128793 26.841467128339897 21.91365056449703 12-13 26.678122693027184 22.83571054339802 26.660498760121072 23.825668003453725 14-15 24.378381381632924 24.332833291451653 24.26596361849822 27.022821708417204 16-17 24.044672289475987 26.97563919272926 25.388647790495366 23.591040727299387 18-19 24.01391457150124 26.259792054020615 26.807318092382964 22.918975282095182 20-21 24.750907616932782 25.22031652039054 26.808163265306124 23.220612597370554 22-23 24.81914913719846 24.97483501386648 26.343883589834277 23.862132259100786 24-25 24.42998469731078 25.407004717154074 26.21887075968009 23.944139825855057 26-27 24.00799050028326 25.631638952109732 26.42321621584277 23.93715433176424 28-29 24.115743840975576 25.848997286152326 26.31826031790787 23.716998554964228 30-31 24.6271282489364 25.360353883499254 26.13629251211611 23.876225355448234 32-33 24.272562884792457 25.466346324627676 25.96901869219479 24.292072098385077 34-35 24.636395340018883 25.64884144668828 25.987545153681097 23.72721805961174 36-37 24.536481845762133 25.546933098339426 26.10118156605849 23.815403489839955 38-39 24.411850441848674 25.564553096549282 26.140284206270852 23.883312255331195 40-41 24.541940940164917 25.41692860666714 26.166466981464513 23.874663471703432 42-43 24.383180202550196 25.454102154303055 25.882939918922286 24.27977772422446 44-45 24.291207067042397 25.499655273802418 26.00334247425004 24.205795184905142 46-47 24.462885646001805 25.488177284104196 25.777110783639962 24.271826286254036 48-49 24.211342165901872 25.693046682533126 25.823936513065537 24.27167463849946 50-51 24.271354896183837 25.62050885751238 26.00554563682886 24.102590609474923 52-53 24.522345078687614 25.462783153238526 25.909275153131194 24.105596614942666 54-55 24.098798379007885 25.363238888444794 26.06416799023586 24.47379474231146 56-57 24.146331886105454 25.522342480841814 25.868569786865116 24.462755846187616 58-59 24.1853236219992 25.47035979091856 26.041085225770438 24.3032313613118 60-61 24.282231940646863 25.34895789340763 26.25469046133263 24.114119704612875 62-63 24.24555562366752 25.372585787882958 26.255175606927043 24.126682981522478 64-65 24.080795320104365 25.264102908889157 26.142204825662134 24.51289694534434 66-67 24.069221467512964 25.459446954754263 25.907094025374768 24.564237552358016 68-69 24.09726457162242 25.344749617478406 26.100273901562087 24.457711909337085 70-71 23.983126333346704 25.25531630076178 26.0816311775926 24.679926188298914 72-73 23.916621760089292 25.523542908658325 25.951172146398832 24.608663184853548 74-75 24.01098094151406 25.596552074742707 25.947727555158895 24.444739428584338 76-77 24.02010319905782 25.200933140905974 25.934341223420027 24.844622436616177 78-79 23.909133849903778 25.284906643282756 26.05298218295272 24.75297732386074 80-81 24.073391820465677 25.455350917143484 25.84953444980997 24.621722812580874 82-83 23.99564799869813 25.39555493525819 26.049343964903727 24.559453101139955 84-85 23.947229172781856 25.483892201646306 25.962805143850453 24.606073481721385 86-87 23.787268887546418 25.72805685548609 25.835655501235067 24.649018755732424 88-89 23.766074911567326 25.416931208858212 25.975231786994158 24.841762092580304 90-91 23.901448441631867 25.223957054495344 26.016258554587317 24.858335949285472 92-93 23.95865062980819 25.0983183451662 26.141433743975018 24.801597281050597 94-95 23.808892678188865 25.035303320306596 26.23596945588095 24.91983454562359 96-97 23.806232206875855 24.917269214313286 26.29329907482819 24.983199503982664 98-99 23.616270362678197 24.924681049463825 26.146399355741114 25.31264923211687 100-101 23.856790416521832 24.818783752850713 26.26257916288691 25.06184666774054 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 73.0 1 58.5 2 64.0 3 79.5 4 76.5 5 84.0 6 143.0 7 293.5 8 459.5 9 557.0 10 509.0 11 450.0 12 449.0 13 470.0 14 564.0 15 625.5 16 692.0 17 801.5 18 893.5 19 1019.5 20 1152.5 21 1255.5 22 1346.5 23 1516.0 24 1736.0 25 1977.5 26 2469.5 27 3210.5 28 4102.0 29 5491.5 30 7762.5 31 10568.5 32 14633.0 33 18187.5 34 20819.5 35 24406.5 36 28970.0 37 33508.0 38 37422.5 39 40922.5 40 43969.0 41 47367.0 42 50393.5 43 54164.0 44 58306.0 45 62446.0 46 66098.5 47 69551.0 48 73626.5 49 76139.0 50 76818.0 51 76921.0 52 77228.5 53 77127.0 54 76673.5 55 74144.5 56 69070.0 57 62720.0 58 56503.0 59 49824.0 60 41910.0 61 35202.5 62 29573.0 63 23279.0 64 17153.5 65 12870.5 66 10030.0 67 7941.0 68 6163.5 69 4758.0 70 3746.0 71 2870.0 72 2168.5 73 1694.5 74 1371.5 75 1072.5 76 841.0 77 603.5 78 408.5 79 281.0 80 190.0 81 146.0 82 103.0 83 74.5 84 67.5 85 60.0 86 45.5 87 32.5 88 23.5 89 23.0 90 23.0 91 19.5 92 18.0 93 16.0 94 11.5 95 8.0 96 6.5 97 5.5 98 3.5 99 3.5 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.05446254600562893 2 0.06269394529840513 3 0.05220736811719709 4 0.06105894132929205 5 0.05237650645882947 6 0.020296600995886555 7 0.016688316374395613 8 0.022664537778739988 9 0.02305919390921556 10-11 0.02458143898390705 12-13 0.03038852204661904 14-15 0.04761244316951721 16-17 0.03162886988525655 18-19 0.025201612903225805 20-21 0.02866894890668976 22-23 0.05048779497726781 24-25 0.045385455004690774 26-27 0.03329206357797503 28-29 0.021621518005340262 30-31 0.013023652305693873 32-33 0.009866403261889298 34-35 0.00955631630222992 36-37 0.0018605217579562676 38-39 0.007047430901349499 40-41 0.004002940751966515 42-43 0.2205845872122393 44-45 0.19453728260085157 46-47 0.20102091903009311 48-49 0.19760996247383994 50-51 0.19594676878112147 52-53 0.2009081601356715 54-55 0.19989333008587715 56-57 0.2120149112361983 58-59 0.2067998123691997 60-61 0.21128197842245794 62-63 0.2105490456087176 64-65 0.21097189146279857 66-67 0.20023160676914195 68-69 0.1992731561665584 70-71 0.182951306199033 72-73 0.18909666594500973 74-75 0.18920942483943134 76-77 0.18779993865916145 78-79 0.21525672945081906 80-81 0.2233753698491737 82-83 0.22188131449808762 84-85 0.21731457927401313 86-87 0.23436936205527892 88-89 0.23281892725698206 90-91 0.23140944107671213 92-93 0.2361735043660244 94-95 0.2473084451901566 96-97 0.24823870606913473 98-99 0.23797764667676988 100-101 0.24812594717471315 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 1773696.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 65.71135880220922 #Duplication Level Percentage of deduplicated Percentage of total 1 81.41062464953531 53.49602766657593 2 10.820657176681829 14.220801724252796 3 3.172019414482019 6.253131176178048 4 1.4851623006320132 3.9036813126537897 5 0.803516588444896 2.6400083423414817 6 0.5299369143039392 2.089372483101705 7 0.36324981763452924 1.6708747370993735 8 0.26200698664785815 1.3773468086642437 9 0.20793261573656988 1.2297181247412874 >10 0.9066459332195776 9.989758595717376 >50 0.02653895710269389 1.1723144542362915 >100 0.010503657593302736 1.3178575773972763 >500 0.0010328468446604373 0.45161675852811245 >1k 1.7214114077673955E-4 0.18749023851229715 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 5.6379447210795987E-5 2 0.0 0.0 0.0 0.0 5.6379447210795987E-5 3 0.0 0.0 0.0 0.0 5.6379447210795987E-5 4 0.0 0.0 0.0 5.6379447210795987E-5 5.6379447210795987E-5 5 0.0 0.0 0.0 5.6379447210795987E-5 5.6379447210795987E-5 6 0.0 0.0 0.0 5.6379447210795987E-5 1.6913834163238795E-4 7 0.0 0.0 0.0 5.6379447210795987E-5 1.6913834163238795E-4 8 0.0 0.0 0.0 5.6379447210795987E-5 1.6913834163238795E-4 9 0.0 0.0 0.0 5.6379447210795987E-5 1.6913834163238795E-4 10-11 0.0 0.0 0.0 5.6379447210795987E-5 1.6913834163238795E-4 12-13 0.0 0.0 0.0 5.6379447210795987E-5 1.9732806523778596E-4 14-15 0.0 0.0 0.0 8.456917081619398E-5 2.8189723605397994E-4 16-17 0.0 0.0 0.0 1.4094861802698997E-4 3.382766832647759E-4 18-19 0.0 0.0 0.0 2.2551778884318395E-4 3.946561304755719E-4 20-21 0.0 0.0 0.0 2.8189723605397994E-4 5.074150248971639E-4 22-23 0.0 0.0 0.0 3.100869596593779E-4 5.356047485025619E-4 24-25 0.0 0.0 0.0 4.2284585408096994E-4 5.637944721079599E-4 26-27 0.0 0.0 0.0 7.611225373457458E-4 6.201739193187559E-4 28-29 0.0 0.0 0.0 0.0024525059536696257 6.201739193187559E-4 30-31 0.0 0.0 0.0 0.008964332106516561 7.047430901349499E-4 32-33 0.0 0.0 0.0 0.025229802626831204 8.456917081619398E-4 34-35 0.0 0.0 0.0 0.05463168434726132 9.020711553727358E-4 36-37 0.0 0.0 0.0 0.09313884679223497 9.020711553727358E-4 38-39 0.0 0.0 0.0 0.14591000938154003 0.0010430197733997258 40-41 0.0 0.0 0.0 0.20355799415457893 0.0010712094970051237 42-43 0.0 0.0 0.0 0.27476523598181424 0.0010712094970051237 44-45 0.0 0.0 0.0 0.37275271523417763 0.0010712094970051237 46-47 0.0 0.0 0.0 0.48587807606263983 0.0011839683914267158 48-49 0.0 0.0 0.0 0.5973684329219888 0.0011839683914267158 50-51 0.0 0.0 0.0 0.7030517067186259 0.0012403478386375118 52-53 0.0 0.0 0.0 0.820349146640687 0.0012967272858483078 54-55 0.0 2.8189723605397993E-5 0.0 0.9718407212960958 0.0013531067330591036 56-57 0.0 8.456917081619398E-5 0.0 1.159612470231652 0.0013812964566645015 58-59 0.0 1.6913834163238795E-4 0.0 1.344847144042722 0.0014094861802698996 60-61 0.0 1.6913834163238795E-4 0.0 1.526811809915566 0.0014094861802698996 62-63 0.0 1.6913834163238795E-4 0.0 1.7207007288734935 0.0014094861802698996 64-65 0.0 1.6913834163238795E-4 0.0 1.9501932687450387 0.0014094861802698996 66-67 0.0 1.6913834163238795E-4 0.0 2.2339228368333695 0.0014094861802698996 68-69 0.0 1.6913834163238795E-4 0.0 2.5394712509922783 0.0014376759038752978 70-71 0.0 1.6913834163238795E-4 0.0 2.8400864635202425 0.0015504347982968898 72-73 0.0 1.6913834163238795E-4 0.0 3.1449301345890164 0.0018323320343508697 74-75 0.0 1.6913834163238795E-4 0.0 3.479598533232301 0.0018605217579562676 76-77 0.0 1.6913834163238795E-4 0.0 3.894382126362127 0.0018605217579562676 78-79 0.0 1.6913834163238795E-4 0.0 4.3729308742873645 0.0018605217579562676 80-81 0.0 1.6913834163238795E-4 0.0 4.834396649707729 0.0019169012051670636 82-83 0.0 1.6913834163238795E-4 0.0 5.29135206935123 0.0021424189940102475 84-85 0.0 1.6913834163238795E-4 0.0 5.785066888576171 0.0021424189940102475 86-87 0.0 1.6913834163238795E-4 0.0 6.35125748719059 0.0021987984412210433 88-89 0.0 1.6913834163238795E-4 0.0 6.988570758461428 0.0022551778884318395 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2510 0.0 55.963005 1 GTATCAA 4030 0.0 39.565556 1 TCAACGC 5165 0.0 30.782686 4 TATCAAC 5260 0.0 30.315245 2 ATCAACG 5295 0.0 30.025232 3 CAACGCA 5340 0.0 29.680828 5 AACGCAG 5695 0.0 27.657766 6 GTGGTAT 1135 0.0 27.176939 1 ACGCAGA 6640 0.0 23.29546 7 GTACATG 6730 0.0 22.70512 1 CGCAGAG 6785 0.0 22.100178 8 TACATGG 6995 0.0 21.506962 2 TGGTATC 1370 0.0 21.47725 2 ACATGGG 7045 0.0 20.007048 3 GAGTACT 2945 0.0 19.578257 12-13 GCAGAGT 7380 0.0 19.482506 9 CAGAGTA 6965 0.0 19.008762 10-11 CATGGGG 5755 0.0 18.720291 4 GTACTTT 3135 0.0 18.088186 14-15 TAAGGTA 485 0.0 17.614195 4 >>END_MODULE