##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921415_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2709343 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.500496983955152 31.0 31.0 34.0 27.0 34.0 2 30.554952621355067 33.0 31.0 34.0 26.0 34.0 3 30.6025697004772 33.0 31.0 34.0 26.0 34.0 4 34.07503959446995 37.0 35.0 37.0 30.0 37.0 5 34.0738880237755 37.0 35.0 37.0 30.0 37.0 6 34.12154754861234 37.0 35.0 37.0 30.0 37.0 7 34.038881012850716 37.0 35.0 37.0 30.0 37.0 8 34.006583883989585 37.0 35.0 37.0 30.0 37.0 9 35.56999206080589 39.0 37.0 39.0 30.0 39.0 10-11 35.46970557068633 39.0 37.0 39.0 30.0 39.0 12-13 35.36219481992498 39.0 35.0 39.0 30.0 39.0 14-15 36.4949838392555 40.0 37.0 41.0 29.0 41.0 16-17 36.44313418419152 40.0 37.0 41.0 29.0 41.0 18-19 36.40091121722129 40.0 37.0 41.0 28.5 41.0 20-21 36.34099853728377 40.0 37.0 41.0 28.0 41.0 22-23 36.22844874200129 40.0 36.5 41.0 27.5 41.0 24-25 36.12795352969336 40.0 36.0 41.0 27.0 41.0 26-27 35.9770366838012 40.0 36.0 41.0 27.0 41.0 28-29 35.833123749927566 40.0 36.0 41.0 27.0 41.0 30-31 35.68056554670265 40.0 36.0 41.0 26.5 41.0 32-33 35.485748020830144 39.5 35.0 41.0 25.5 41.0 34-35 35.32003053876899 39.0 35.0 41.0 25.0 41.0 36-37 35.13959638923532 39.0 35.0 41.0 24.5 41.0 38-39 35.35842231862116 39.5 35.0 41.0 25.0 41.0 40-41 35.47216668395253 40.0 35.0 41.0 25.0 41.0 42-43 35.293916458713426 40.0 35.0 41.0 24.0 41.0 44-45 35.1618167208803 40.0 35.0 41.0 24.0 41.0 46-47 34.99406978001678 40.0 35.0 41.0 23.0 41.0 48-49 34.83505724450541 39.0 35.0 41.0 22.5 41.0 50-51 33.10547483282848 37.0 32.5 39.5 18.5 40.0 52-53 33.261483872658424 37.5 33.0 39.5 18.5 40.0 54-55 34.12357442376252 39.0 34.0 40.5 19.5 41.0 56-57 34.137737636024674 39.0 34.0 41.0 19.0 41.0 58-59 33.95802690910675 38.0 34.0 41.0 18.0 41.0 60-61 33.70823258627645 38.0 34.0 40.0 16.0 41.0 62-63 33.41607928564231 37.0 34.0 40.0 13.5 41.0 64-65 33.12713358921333 37.0 33.0 40.0 12.5 41.0 66-67 32.789384548209654 36.0 33.0 39.5 8.0 41.0 68-69 32.420112366725064 36.0 33.0 39.0 7.0 41.0 70-71 32.0330561689679 35.0 32.5 39.0 2.0 40.5 72-73 31.675756816320416 35.0 32.0 37.5 2.0 40.0 74-75 31.274093756309185 35.0 32.0 37.0 2.0 39.0 76-77 30.895343631278877 35.0 32.0 36.5 2.0 39.0 78-79 30.54500869768058 35.0 31.0 36.0 2.0 38.5 80-81 30.187520184782805 35.0 31.0 36.0 2.0 37.0 82-83 29.878386199163412 35.0 31.0 35.0 2.0 37.0 84-85 29.634719745709567 35.0 31.0 35.0 2.0 36.5 86-87 29.403709866192653 35.0 31.0 35.0 2.0 36.0 88-89 29.186789933943395 35.0 30.5 35.0 2.0 36.0 90-91 28.91720243616257 34.5 30.0 35.0 2.0 35.5 92-93 28.70891670046945 34.0 30.0 35.0 2.0 35.0 94-95 28.487237496322912 34.0 30.0 35.0 2.0 35.0 96-97 28.221681787798737 34.0 29.0 35.0 2.0 35.0 98-99 27.973077790445874 34.0 29.0 35.0 2.0 35.0 100-101 26.908510291978537 33.0 26.5 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 85859.0 3 15147.0 4 10589.0 5 8040.0 6 7411.0 7 7816.0 8 8208.0 9 8647.0 10 9445.0 11 10450.0 12 10352.0 13 10965.0 14 11811.0 15 12952.0 16 13778.0 17 14676.0 18 12985.0 19 11881.0 20 11795.0 21 12394.0 22 13503.0 23 15616.0 24 17792.0 25 21031.0 26 24813.0 27 29665.0 28 34700.0 29 41012.0 30 48609.0 31 59094.0 32 73616.0 33 95201.0 34 134006.0 35 193419.0 36 316819.0 37 571151.0 38 607853.0 39 116226.0 40 16.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.90462322829426 18.424004020808646 12.893213334401807 24.778159416495285 2 16.142306176693154 19.95471451716967 38.96390715257278 24.939072153564396 3 19.249781752274426 23.71318777576394 29.773642765032506 27.263387706929127 4 13.646566560060272 15.671989600336808 36.2837822865964 34.39766155300652 5 14.209795725739177 37.33842643419793 34.180903309001515 14.270874531061379 6 33.333899384419446 34.90159017286093 17.202255590523567 14.562254852196062 7 28.741186459448485 32.248661818450294 20.886226881760123 18.1239248403411 8 26.930277254062123 34.34895816989651 20.15333311428954 18.567431461751816 9 27.269747018722374 15.489390262181132 19.545891850743775 37.69497086835272 10-11 25.723115476967518 25.258593064707153 27.712855189360493 21.305436268964844 12-13 26.189939967657853 22.806087412406683 27.573360555871428 23.430612064064036 14-15 23.424063318848244 24.4770264601532 24.900888898079522 27.198021322919036 16-17 23.40752714056383 27.551105929055726 25.916174018605187 23.12519291177526 18-19 23.448026344935542 26.84021368341775 27.309335174328453 22.40242479731825 20-21 23.808948033854872 25.975134771722924 27.434285690024023 22.781631504398185 22-23 23.87732862429343 25.721911843612016 27.014792928906868 23.385966603187686 24-25 23.540078939701488 26.03963306221274 27.01845877414893 23.401829223936847 26-27 23.214538228736263 26.25126778077537 27.09777797304976 23.436416017438606 28-29 23.34884955503921 26.650928942866486 26.82486346241737 23.175358039676933 30-31 23.825915418401706 26.135057171602664 26.717782822291746 23.32124458770388 32-33 23.51331009290266 26.165140682861143 26.596247718776024 23.725301505460173 34-35 23.864830575887318 26.300446386220607 26.65800200731685 23.176721030575223 36-37 23.831966804685198 26.167553366222542 26.76660153294322 23.233878296149037 38-39 23.619279426328657 26.380997413577038 26.712503972652645 23.287219187441657 40-41 23.843816543181713 26.09950698296236 26.73557167571534 23.32110479814058 42-43 23.616833730787995 26.080590267335886 26.487958177930228 23.814617823945895 44-45 23.41126580090102 26.165044010935013 26.740121461120513 23.68356872704345 46-47 23.68482170527728 26.186924141440514 26.357707786151362 23.770546367130844 48-49 23.385951096156653 26.42295672639102 26.409569456907693 23.781522720544633 50-51 23.599540476168904 26.30953290064526 26.62483148296654 23.466095140219302 52-53 23.85987445587344 26.117242688997127 26.526434366701494 23.49644848842793 54-55 23.17013030022472 26.04236758949484 26.852216020971703 23.935286089308732 56-57 23.30930613941715 26.224136770446293 26.55795190517438 23.908605184962177 58-59 23.42465824354082 26.109372422633705 26.680858901423388 23.785110432402085 60-61 23.46292438410732 26.113220876225984 26.870702066336932 23.553152673329762 62-63 23.450174347988824 26.039153217633924 26.95453563666974 23.556136797707513 64-65 23.17394042886219 25.884185683709237 26.864727958372033 24.07714592905655 66-67 23.240976449336664 26.051623480064784 26.637750476466255 24.069649594132294 68-69 23.294704827724953 25.948744253060596 26.815999568055005 23.94055135115945 70-71 23.2625040234472 25.805692412846266 26.734047967810206 24.197755595896332 72-73 23.222737686468026 26.04869630235808 26.560723572021157 24.167842439152736 74-75 23.203219208754163 26.13636153530698 26.643707888311326 24.01671136762753 76-77 23.26478450911327 25.72062793476599 26.68158844044476 24.332999115675978 78-79 23.207656072952247 25.80969336982499 26.733950244328785 24.248700312893973 80-81 23.45686182070321 25.93008870458678 26.498370669799993 24.11467880491002 82-83 23.427830046477734 25.930470196360574 26.633295665345514 24.008404091816182 84-85 23.36743327578602 25.958763820833358 26.569326326554954 24.10447657682566 86-87 23.212533431442676 26.158958220847012 26.506077359512105 24.12243098819821 88-89 23.189210555862505 25.859158858261562 26.55698121081038 24.39464937506555 90-91 23.35308806392542 25.63069012078501 26.68331391154764 24.33290790374193 92-93 23.558549868010235 25.44506660160437 26.780076805816243 24.216306724569147 94-95 23.46190084260678 25.35425577750904 26.834751429427172 24.34909195045701 96-97 23.39563790888245 25.14654232268078 26.860261940065875 24.59755782837089 98-99 23.181801618058984 25.219848589752292 26.78851898417845 24.809830808010275 100-101 23.52789261453938 25.14043569335597 26.83280488998333 24.49886680212132 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 152.0 1 116.0 2 138.5 3 199.5 4 191.0 5 229.5 6 334.5 7 589.0 8 923.5 9 1054.0 10 930.0 11 774.5 12 781.0 13 833.5 14 912.5 15 1056.0 16 1181.5 17 1307.0 18 1436.5 19 1597.5 20 1778.5 21 1934.5 22 2155.0 23 2527.0 24 2961.0 25 3601.0 26 4663.0 27 6158.5 28 8291.5 29 11452.0 30 15747.0 31 21557.5 32 29821.5 33 35555.0 34 39205.5 35 45123.5 36 53180.5 37 60962.0 38 67441.0 39 73450.5 40 77551.5 41 81167.5 42 85124.0 43 90185.5 44 95451.5 45 101209.5 46 105624.5 47 108695.5 48 112409.0 49 114525.5 50 114286.5 51 113182.5 52 111986.0 53 110734.5 54 108283.5 55 102800.0 56 95504.5 57 86424.5 58 77368.5 59 66895.5 60 54632.5 61 44758.5 62 37134.5 63 28896.0 64 20682.0 65 15018.5 66 11222.5 67 8578.0 68 6598.0 69 5087.5 70 3871.0 71 2815.5 72 2046.5 73 1555.5 74 1221.5 75 961.0 76 709.0 77 480.0 78 326.0 79 225.0 80 162.0 81 122.0 82 92.5 83 81.5 84 70.0 85 53.5 86 46.5 87 43.5 88 34.5 89 27.5 90 26.0 91 24.5 92 22.0 93 17.5 94 11.5 95 7.5 96 13.0 97 13.5 98 6.5 99 4.5 100 4.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.05278032349540091 2 0.060236005555590416 3 0.05207904646993755 4 0.05768926267364449 5 0.05041812719910325 6 0.01911902627315921 7 0.016350827488435388 8 0.022145590277790592 9 0.02233013686343885 10-11 0.02388032818288419 12-13 0.029638181655109744 14-15 0.04691174207178641 16-17 0.03140982887733299 18-19 0.024470877256958606 20-21 0.028844631336822246 22-23 0.05019667129632535 24-25 0.044291180555581185 26-27 0.03211110590279636 28-29 0.02085376417825281 30-31 0.01289980633681302 32-33 0.010002424942135418 34-35 0.009374966550931351 36-37 0.0016609192708342945 38-39 0.007234226157411594 40-41 0.003912387615743005 42-43 0.21739587789364434 44-45 0.1913932639758052 46-47 0.19698502552094732 48-49 0.1949365584202517 50-51 0.19338636710080637 52-53 0.19759402925358655 54-55 0.19630220315404878 56-57 0.20672908524317518 58-59 0.20362870260428448 60-61 0.20837154985544468 62-63 0.20503125665521124 64-65 0.20610162685197114 66-67 0.19641293110543773 68-69 0.19543483420150198 70-71 0.1802466502026506 72-73 0.18796069748274766 74-75 0.1873516937501084 76-77 0.18519249869802384 78-79 0.2108075647860016 80-81 0.21892761455452486 82-83 0.21769115243068154 84-85 0.21298521449665103 86-87 0.23018495627906838 88-89 0.22955749788786434 90-91 0.2285794009839286 92-93 0.23225187803832884 94-95 0.2435830383971317 96-97 0.24454268064250262 98-99 0.23214115008693992 100-101 0.2433615824943538 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2709343.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.758811655922486 #Duplication Level Percentage of deduplicated Percentage of total 1 78.39551090107433 46.06427059706044 2 11.956334414623033 14.05080003928118 3 3.8800556535962802 6.83962378092483 4 1.8009280131916519 4.232815597320118 5 0.9835459240035298 2.889599485173683 6 0.6501133613320215 2.2919933132104156 7 0.44286141676987784 1.8215407404359367 8 0.29861796022413667 1.4037149185508637 9 0.23069251655066705 1.2199696317388282 >10 1.2779799103850171 13.252543969618348 >50 0.05947247464925942 2.3623007975753096 >100 0.021804219867097026 2.279975558850179 >500 0.0010100527191303432 0.4012026029990723 >1k 0.001073181014011797 0.8896489672609093 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 3.690931712965099E-5 5 0.0 0.0 0.0 0.0 3.690931712965099E-5 6 0.0 0.0 0.0 0.0 3.690931712965099E-5 7 0.0 0.0 0.0 0.0 7.381863425930198E-5 8 0.0 0.0 0.0 0.0 7.381863425930198E-5 9 0.0 0.0 0.0 0.0 7.381863425930198E-5 10-11 0.0 0.0 0.0 0.0 7.381863425930198E-5 12-13 0.0 1.8454658564825496E-5 0.0 0.0 1.1072795138895297E-4 14-15 0.0 3.690931712965099E-5 0.0 0.0 2.0300124421308044E-4 16-17 0.0 3.690931712965099E-5 0.0 3.690931712965099E-5 2.9527453703720794E-4 18-19 0.0 3.690931712965099E-5 0.0 7.381863425930198E-5 3.690931712965099E-4 20-21 0.0 3.690931712965099E-5 0.0 9.227329282412747E-5 4.060024884261609E-4 22-23 0.0 3.690931712965099E-5 0.0 2.768198784723824E-4 4.060024884261609E-4 24-25 0.0 3.690931712965099E-5 0.0 5.536397569447649E-4 4.060024884261609E-4 26-27 0.0 3.690931712965099E-5 0.0 0.0014394633680563885 4.429118055558119E-4 28-29 0.0 3.690931712965099E-5 0.0 0.0049827578125028835 4.429118055558119E-4 30-31 0.0 7.381863425930198E-5 0.0 0.020226305787048742 4.429118055558119E-4 32-33 0.0 7.381863425930198E-5 0.0 0.05337087256947533 4.798211226854629E-4 34-35 0.0 7.381863425930198E-5 0.0 0.0964255910012132 4.798211226854629E-4 36-37 0.0 9.227329282412747E-5 0.0 0.15992807112277774 5.167304398151139E-4 38-39 0.0 1.1072795138895297E-4 0.0 0.26264670069459645 6.090037326392413E-4 40-41 0.0 1.1072795138895297E-4 0.0 0.3723411912039192 6.274583912040668E-4 42-43 0.0 1.1072795138895297E-4 0.0 0.4921857439238959 6.274583912040668E-4 44-45 0.0 1.1072795138895297E-4 0.0 0.6441598572052338 6.459130497688923E-4 46-47 1.8454658564825496E-5 1.1072795138895297E-4 0.0 0.8196267508395947 6.643677083337178E-4 48-49 3.690931712965099E-5 1.1072795138895297E-4 0.0 0.9967176544276601 7.197316840281943E-4 50-51 3.690931712965099E-5 1.1072795138895297E-4 0.0 1.1739931046013738 7.935503182874963E-4 52-53 3.690931712965099E-5 1.1072795138895297E-4 0.0 1.363153354890835 8.489142939819728E-4 54-55 5.5363975694476485E-5 1.1072795138895297E-4 0.0 1.5955344155391178 8.858236111116238E-4 56-57 7.381863425930198E-5 1.1072795138895297E-4 0.0 1.8660981647580244 8.858236111116238E-4 58-59 7.381863425930198E-5 1.1072795138895297E-4 0.0 2.142272130180638 9.042782696764493E-4 60-61 7.381863425930198E-5 1.1072795138895297E-4 0.0 2.4183907316275572 9.596422453709258E-4 62-63 7.381863425930198E-5 1.1072795138895297E-4 0.0 2.711413800319856 9.596422453709258E-4 64-65 7.381863425930198E-5 1.1072795138895297E-4 0.0 3.0386887153084716 9.780969039357513E-4 66-67 7.381863425930198E-5 1.1072795138895297E-4 0.0 3.434190503011247 9.965515625005768E-4 68-69 7.381863425930198E-5 1.1072795138895297E-4 0.0 3.848479133133014 9.965515625005768E-4 70-71 7.381863425930198E-5 1.4763726851860397E-4 0.0 4.264908503648302 0.0011072795138895297 72-73 7.381863425930198E-5 1.4763726851860397E-4 0.0 4.701988637097628 0.0011995528067136572 74-75 7.381863425930198E-5 1.4763726851860397E-4 0.0 5.171475150986789 0.0012180074652784827 76-77 7.381863425930198E-5 1.4763726851860397E-4 0.0 5.7135069276942785 0.0012180074652784827 78-79 7.381863425930198E-5 1.4763726851860397E-4 0.0 6.307008747139067 0.0012180074652784827 80-81 7.381863425930198E-5 1.4763726851860397E-4 0.0 6.907283426277146 0.001347190075232261 82-83 7.381863425930198E-5 1.4763726851860397E-4 0.0 7.5126146818619866 0.0014763726851860395 84-85 7.381863425930198E-5 1.4763726851860397E-4 0.0 8.159247463314907 0.0014763726851860395 86-87 7.381863425930198E-5 1.8454658564825494E-4 0.0 8.879034511318796 0.0014763726851860395 88-89 7.381863425930198E-5 1.8454658564825494E-4 0.0 9.647006672835444 0.0014763726851860395 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2720 0.0 60.88753 1 GTATCAA 5005 0.0 41.62289 1 TCAACGC 6205 0.0 33.578304 4 CAACGCA 6425 0.0 32.27782 5 ATCAACG 6440 0.0 32.276924 3 TATCAAC 6490 0.0 31.810062 2 AACGCAG 6830 0.0 30.284845 6 GTACATG 8395 0.0 28.489292 1 TACATGG 8730 0.0 26.909828 2 ACGCAGA 7995 0.0 25.460712 7 CGCAGAG 8135 0.0 24.850775 8 ACATGGG 9120 0.0 24.769428 3 CATGGGG 7255 0.0 23.092625 4 CCGTACG 130 2.9615837E-4 21.902605 9 GCAGAGT 9165 0.0 20.9188 9 GAGTACA 6675 0.0 19.976843 1 GTGTAAG 1245 0.0 19.8201 1 GTATAGG 795 0.0 19.697842 1 CAGAGTA 8255 0.0 19.517067 10-11 ATGGGGG 4590 0.0 19.437529 5 >>END_MODULE