##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921415_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2709343 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.384106405132165 33.0 31.0 34.0 29.0 34.0 2 31.51503261122715 34.0 31.0 34.0 28.0 34.0 3 31.587602234194783 34.0 31.0 34.0 28.0 34.0 4 35.08265693933917 37.0 35.0 37.0 32.0 37.0 5 34.820616658725015 37.0 35.0 37.0 32.0 37.0 6 34.77442944654848 37.0 35.0 37.0 32.0 37.0 7 34.640736148948285 37.0 35.0 37.0 32.0 37.0 8 34.60431698755012 37.0 35.0 37.0 32.0 37.0 9 36.21640818456726 39.0 37.0 39.0 32.0 39.0 10-11 36.07048074016468 39.0 37.0 39.0 32.0 39.0 12-13 36.0025138935897 39.0 37.0 39.0 31.0 39.0 14-15 37.22886231089973 40.0 38.0 41.0 31.0 41.0 16-17 37.206221397586056 40.0 38.0 41.0 31.0 41.0 18-19 37.173927221470294 40.0 38.0 41.0 31.0 41.0 20-21 37.135150661987055 40.0 38.0 41.0 31.0 41.0 22-23 37.02508283373497 40.0 37.5 41.0 31.0 41.0 24-25 36.95293859064725 40.0 37.0 41.0 30.5 41.0 26-27 36.81002442289515 40.0 37.0 41.0 30.0 41.0 28-29 36.656052777370746 40.0 37.0 41.0 30.0 41.0 30-31 36.50261059600058 40.0 37.0 41.0 30.0 41.0 32-33 36.434983684236364 40.0 36.5 41.0 30.0 41.0 34-35 36.553993901842624 40.0 37.0 41.0 30.0 41.0 36-37 36.51993546036807 40.0 37.0 41.0 30.0 41.0 38-39 36.426231377865406 40.0 37.0 41.0 30.0 41.0 40-41 36.285860446610116 40.0 36.0 41.0 29.0 41.0 42-43 36.17245011059877 40.0 36.0 41.0 29.0 41.0 44-45 36.01940470438774 40.0 36.0 41.0 28.0 41.0 46-47 35.843085205527686 40.0 35.5 41.0 27.5 41.0 48-49 35.66910225098853 40.0 35.0 41.0 27.0 41.0 50-51 35.50700631112413 39.5 35.0 41.0 26.5 41.0 52-53 35.32808285994058 39.0 35.0 41.0 26.0 41.0 54-55 35.11751649754203 39.0 35.0 41.0 26.0 41.0 56-57 34.853068253078334 39.0 35.0 41.0 25.0 41.0 58-59 34.62935885194307 38.5 35.0 40.5 25.0 41.0 60-61 34.35617989305894 38.0 34.0 40.0 23.5 41.0 62-63 34.05276629795489 37.0 34.0 40.0 23.0 41.0 64-65 33.734963974661014 37.0 34.0 40.0 22.5 41.0 66-67 33.40044671346522 36.0 34.0 39.0 22.0 41.0 68-69 33.03733358973005 36.0 33.5 39.0 21.5 41.0 70-71 32.65761791696363 35.0 33.0 38.5 20.5 40.0 72-73 32.258777127886724 35.0 33.0 37.5 19.5 40.0 74-75 31.854779369020463 35.0 33.0 37.0 17.5 39.0 76-77 29.09330656915717 33.0 28.5 34.5 9.0 36.5 78-79 30.754925640644245 34.5 31.5 36.0 11.5 37.5 80-81 30.955988776614845 35.0 32.0 36.0 11.5 37.0 82-83 30.791836249599996 35.0 32.0 35.0 8.5 37.0 84-85 30.561308590311377 35.0 32.0 35.0 6.5 36.5 86-87 30.31799056081124 35.0 32.0 35.0 2.0 36.0 88-89 30.03918754472948 35.0 31.0 35.0 2.0 36.0 90-91 29.85025151854158 34.0 31.0 35.0 2.0 35.0 92-93 29.69921600919485 34.0 31.0 35.0 2.0 35.0 94-95 29.60007998249022 34.0 31.0 35.0 2.0 35.0 96-97 29.40764329211916 34.0 31.0 35.0 2.0 35.0 98-99 29.142511487102226 34.0 31.0 35.0 2.0 35.0 100-101 28.052308991515655 33.0 28.5 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 51035.0 3 17603.0 4 9596.0 5 6692.0 6 6170.0 7 6206.0 8 6171.0 9 6819.0 10 7374.0 11 8337.0 12 8927.0 13 9821.0 14 10649.0 15 11974.0 16 13121.0 17 14640.0 18 13119.0 19 11412.0 20 10876.0 21 10612.0 22 10858.0 23 12517.0 24 14213.0 25 17250.0 26 20329.0 27 24442.0 28 29182.0 29 35386.0 30 42655.0 31 52723.0 32 67305.0 33 88894.0 34 129304.0 35 191516.0 36 328122.0 37 634933.0 38 677456.0 39 91098.0 40 6.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.06084577850066 19.729336093449653 13.513677362117404 25.69614076593228 2 15.261175657709703 21.210367449321343 37.44850195214603 26.07995494082292 3 17.910992074272688 24.778676131867094 29.586084501718616 27.7242472921416 4 13.27828183821106 16.79014004394621 35.32642778126996 34.60515033657276 5 13.995558500966384 37.663764124280746 34.14693128598565 14.193746088767217 6 33.395169130625106 35.47886079416062 16.858473288190496 14.267496787023784 7 28.63011974507435 32.4238125978329 20.901260418131507 18.044807238961237 8 26.989654116023015 34.692373278608045 19.87723720974868 18.440735395620255 9 27.00245040956424 15.454706177844594 19.445156999316808 38.09768641327436 10-11 25.686035043045933 25.49767964100894 27.70749344515442 21.108791870790707 12-13 26.09689237510593 22.96697419589154 27.612835764925432 23.323297664077103 14-15 23.306518499762106 24.664171708443497 24.910942245986543 27.118367545807853 16-17 23.336920920282488 27.746700121284064 25.88982860044985 23.0265503579836 18-19 23.402276348585392 26.97792708848911 27.3480358124251 22.2717607505004 20-21 23.76409526927496 26.05886840699789 27.457793086189913 22.71924323753724 22-23 23.745088739487734 25.780920410359 27.114310338145707 23.359680512007557 24-25 23.504365148058483 26.12002136344393 27.018481888870966 23.35713159962662 26-27 23.141290662871285 26.41687265780053 27.133821461883116 23.308015217445067 28-29 23.311134537841305 26.74733385600534 26.852274287637922 23.089257318515436 30-31 23.798470430695488 26.231421417846327 26.697822850883142 23.272285300575042 32-33 23.446426541096145 26.303344215915146 26.609389143111116 23.64084009987759 34-35 23.82749378879523 26.398464682095764 26.710515314511856 23.06352621459715 36-37 23.74257585440767 26.31464333189324 26.820711555322863 23.12206925837623 38-39 23.610144546406637 26.449104255191536 26.73293748010353 23.207813718298294 40-41 23.783371376431784 26.226520813462827 26.742317311922893 23.247790498182493 42-43 23.574310100633895 26.247403683917366 26.4432047667016 23.73508144874714 44-45 23.40042430556645 26.28441023095031 26.678927664113882 23.636237799369354 46-47 23.625671674626915 26.28300604594832 26.39260016381903 23.698722115605737 48-49 23.330786905318465 26.508574030457837 26.456876435364997 23.7037626288587 50-51 23.541397173642984 26.43229409379566 26.51927624501394 23.507032487547416 52-53 23.888875047636976 26.192280826082825 26.406432675689317 23.512411450590882 54-55 23.11392075679576 26.169450424322733 26.769214017921488 23.947414800960022 56-57 23.26550966306435 26.27985126137705 26.492055535582328 23.962583539976272 58-59 23.325141813571097 26.187934934171004 26.631384379144013 23.855538873113883 60-61 23.40651755443138 26.28641139547717 26.730001531848607 23.57706951824284 62-63 23.42151859738861 26.170680929977408 26.774107867825652 23.633692604808328 64-65 23.097250034198964 25.971125922148946 26.71288803361227 24.21873601003982 66-67 23.128390546668967 26.18939707922606 26.4924405289922 24.189771845112766 68-69 23.156080074915867 26.103132625486936 26.575344033543054 24.165443266054147 70-71 23.094622559701385 25.992841501493864 26.47667801655645 24.4358579222483 72-73 23.056931501812166 26.226343764271455 26.30343039184595 24.413294342070433 74-75 22.959766927021082 26.296023579017007 26.325096786090786 24.419112707871125 76-77 22.949983286386612 25.8350655863648 26.52854642620029 24.686404701048307 78-79 22.872907403891823 25.855228507838536 26.56510270276659 24.706761385503054 80-81 23.047714852737087 26.06681320207188 26.274706615290643 24.610765329900385 82-83 22.98336075930091 26.039761038759675 26.409240966735364 24.56763723520405 84-85 22.83150171046027 26.082530008050636 26.304720929421155 24.78124735206794 86-87 22.65583371580496 26.259409032856233 26.250118897114977 24.834638354223827 88-89 22.56172498000754 25.996301626522005 26.288500515677747 25.153472877792698 90-91 22.614489437369368 25.729812888427293 26.426718799464606 25.228978874738733 92-93 22.709212338953986 25.587743986664503 26.496786049870373 25.206257624511142 94-95 22.535371129716843 25.48031689047804 26.597269822357216 25.387042157447897 96-97 22.37845396099844 25.264931873606404 26.639807267910413 25.71680689748474 98-99 22.09493012581119 25.335142165978052 26.541893878045165 26.028033830165597 100-101 22.079364915321552 25.372918103072816 26.54489633515274 26.002820646452896 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 145.0 1 121.0 2 126.0 3 156.0 4 143.5 5 163.0 6 274.0 7 563.5 8 781.0 9 818.5 10 723.0 11 592.5 12 586.0 13 605.0 14 663.0 15 750.0 16 840.5 17 916.0 18 1019.0 19 1124.0 20 1301.0 21 1529.0 22 1788.5 23 2188.5 24 2644.5 25 3364.5 26 4577.0 27 6370.5 28 8714.0 29 11938.5 30 16303.5 31 21931.5 32 30426.0 33 36018.5 34 39429.0 35 45466.0 36 53296.0 37 60634.0 38 66756.5 39 72997.5 40 77107.0 41 80841.0 42 85491.0 43 90905.0 44 96185.0 45 102028.0 46 106318.0 47 109617.5 48 113563.0 49 115292.0 50 115039.5 51 114345.5 52 113216.0 53 111630.5 54 109135.5 55 103951.5 56 96211.5 57 86516.5 58 77145.0 59 66642.0 60 54488.0 61 44533.5 62 36555.0 63 27811.5 64 19691.0 65 14330.0 66 10639.5 67 8099.5 68 6198.0 69 4636.5 70 3476.0 71 2499.0 72 1763.5 73 1381.0 74 1099.5 75 844.0 76 592.0 77 345.0 78 182.0 79 108.5 80 75.5 81 42.0 82 21.0 83 13.0 84 5.5 85 4.0 86 4.5 87 3.5 88 3.5 89 2.0 90 0.5 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.5 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.15291530086814403 2 6.274583912040668E-4 3 0.007049679571763339 4 0.004502936689817421 5 0.029453635069461487 6 6.274583912040668E-4 7 1.4763726851860397E-4 8 0.0019561938078715025 9 0.0 10-11 0.1017774419850126 12-13 2.5836521990755694E-4 14-15 0.005388760300929044 16-17 3.690931712965099E-5 18-19 1.4763726851860397E-4 20-21 4.429118055558119E-4 22-23 2.9527453703720794E-4 24-25 0.0015501913194453415 26-27 0.003100382638890683 28-29 0.0069020423032447355 30-31 0.01515127468172173 32-33 0.01576027841436097 34-35 0.012087801359960699 36-37 9.042782696764493E-4 38-39 2.0300124421308044E-4 40-41 0.0049827578125028835 42-43 0.007972412500004614 44-45 0.007769411255791533 46-47 0.009448785185190654 48-49 0.01179252682292349 50-51 0.00614540130208689 52-53 0.001863920515047375 54-55 9.411875868061003E-4 56-57 0.0059424000578738095 58-59 0.008876690769681063 60-61 0.007308044791670896 62-63 0.017771836197926952 64-65 0.03423339163775129 66-67 0.03637413203127105 68-69 0.02600261391783912 70-71 0.040360338281273354 72-73 0.025910340625014995 74-75 0.02448933191552343 76-77 0.2383050060475916 78-79 0.06721186649309445 80-81 0.0540721495949387 82-83 0.019764939322928107 84-85 0.031797376707194326 86-87 0.08011167282990747 88-89 0.2610965093751511 90-91 0.3155008428242566 92-93 0.05102713093174249 94-95 0.00524112303241044 96-97 0.010980521846071168 98-99 0.0016609192708342945 100-101 0.0012918260995377845 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2709343.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.14816207643685 #Duplication Level Percentage of deduplicated Percentage of total 1 77.99610695362449 45.3533026847046 2 12.116980410973193 14.091602816285592 3 3.941568846631365 6.875849523880646 4 1.8600576010126058 4.326357234207572 5 1.0180337240535022 2.9598394992770816 6 0.6416620547947972 2.238688149630442 7 0.4447800785274879 1.8104200866210673 8 0.33505365254857694 1.5586203274157449 9 0.2399566327789871 1.2557733456733724 >10 1.3168876697262004 13.452611142344159 >50 0.06424962419623155 2.492420247045052 >100 0.022492617656335444 2.3026917297400527 >500 0.0012765491036209225 0.5085427705796045 >1k 8.935843724683402E-4 0.7732804425948469 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.690931712965099E-5 2 0.0 0.0 0.0 0.0 3.690931712965099E-5 3 0.0 0.0 0.0 0.0 3.690931712965099E-5 4 0.0 0.0 0.0 0.0 7.381863425930198E-5 5 0.0 0.0 0.0 0.0 7.381863425930198E-5 6 0.0 0.0 0.0 0.0 1.4763726851860397E-4 7 0.0 0.0 0.0 0.0 1.4763726851860397E-4 8 0.0 3.690931712965099E-5 0.0 0.0 1.4763726851860397E-4 9 0.0 3.690931712965099E-5 0.0 0.0 1.8454658564825494E-4 10-11 0.0 3.690931712965099E-5 0.0 0.0 1.8454658564825494E-4 12-13 0.0 3.690931712965099E-5 0.0 0.0 2.2145590277790594E-4 14-15 1.8454658564825496E-5 5.5363975694476485E-5 0.0 0.0 3.137291956020334E-4 16-17 3.690931712965099E-5 7.381863425930198E-5 0.0 1.8454658564825496E-5 3.690931712965099E-4 18-19 3.690931712965099E-5 7.381863425930198E-5 0.0 7.381863425930198E-5 4.429118055558119E-4 20-21 3.690931712965099E-5 7.381863425930198E-5 0.0 1.2918260995377847E-4 4.429118055558119E-4 22-23 3.690931712965099E-5 7.381863425930198E-5 0.0 3.137291956020334E-4 5.167304398151139E-4 24-25 3.690931712965099E-5 7.381863425930198E-5 0.0 6.274583912040668E-4 5.905490740744158E-4 26-27 3.690931712965099E-5 7.381863425930198E-5 0.0 0.0013656447337970865 6.274583912040668E-4 28-29 3.690931712965099E-5 7.381863425930198E-5 0.0 0.004853575202549105 6.274583912040668E-4 30-31 3.690931712965099E-5 7.381863425930198E-5 0.0 0.020134032494224616 6.459130497688923E-4 32-33 3.690931712965099E-5 7.381863425930198E-5 0.0 0.05386914835072562 7.381863425930198E-4 34-35 3.690931712965099E-5 7.381863425930198E-5 0.0 0.09764359846649169 7.750956597226708E-4 36-37 3.690931712965099E-5 7.381863425930198E-5 0.0 0.16205035685773267 7.750956597226708E-4 38-39 3.690931712965099E-5 7.381863425930198E-5 0.0 0.26552562743070923 7.750956597226708E-4 40-41 3.690931712965099E-5 7.381863425930198E-5 0.0 0.3759213949654953 7.750956597226708E-4 42-43 3.690931712965099E-5 1.4763726851860397E-4 0.0 0.4970762284435747 7.935503182874963E-4 44-45 3.690931712965099E-5 1.4763726851860397E-4 0.0 0.650268349190191 8.120049768523218E-4 46-47 3.690931712965099E-5 1.4763726851860397E-4 0.0 0.8262519732643671 8.120049768523218E-4 48-49 3.690931712965099E-5 1.4763726851860397E-4 0.0 1.0044686110248868 8.489142939819728E-4 50-51 3.690931712965099E-5 1.4763726851860397E-4 0.0 1.1817256065400357 8.858236111116238E-4 52-53 3.690931712965099E-5 1.4763726851860397E-4 0.0 1.3712549500007936 9.780969039357513E-4 54-55 3.690931712965099E-5 1.4763726851860397E-4 0.0 1.6047986541386603 0.0010703701967598787 56-57 3.690931712965099E-5 1.4763726851860397E-4 0.0 1.8757314965288634 0.0010703701967598787 58-59 5.5363975694476485E-5 1.6609192708342944E-4 0.0 2.151056547657495 0.0011072795138895297 60-61 7.381863425930198E-5 1.8454658564825494E-4 0.0 2.4283562472525624 0.0011441888310191807 62-63 7.381863425930198E-5 1.8454658564825494E-4 0.0 2.7220436836531956 0.0011810981481488317 64-65 7.381863425930198E-5 1.8454658564825494E-4 0.0 3.049632327837413 0.0011810981481488317 66-67 7.381863425930198E-5 1.8454658564825494E-4 0.0 3.445244843491577 0.0011995528067136572 68-69 7.381863425930198E-5 1.8454658564825494E-4 0.0 3.8599948400774653 0.0012180074652784827 70-71 7.381863425930198E-5 1.8454658564825494E-4 0.0 4.279100136084653 0.0012180074652784827 72-73 7.381863425930198E-5 1.8454658564825494E-4 0.0 4.7188931043430085 0.0013287354166674355 74-75 7.381863425930198E-5 1.8454658564825494E-4 0.0 5.192255096530783 0.0013287354166674355 76-77 7.381863425930198E-5 2.2145590277790594E-4 0.0 5.7395464509292475 0.0013287354166674355 78-79 7.381863425930198E-5 2.2145590277790594E-4 0.0 6.3384554853335295 0.0013287354166674355 80-81 7.381863425930198E-5 2.2145590277790594E-4 0.0 6.946794850264437 0.001347190075232261 82-83 7.381863425930198E-5 2.2145590277790594E-4 0.0 7.559950881080764 0.001421008709491563 84-85 7.381863425930198E-5 2.2145590277790594E-4 0.0 8.213577978129752 0.0014394633680563885 86-87 7.381863425930198E-5 2.2145590277790594E-4 0.0 8.942333990196147 0.0014394633680563885 88-89 7.381863425930198E-5 2.2145590277790594E-4 0.0 9.719865664849376 0.001457918026621214 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2640 0.0 55.996246 1 GTATCAA 4900 0.0 41.810333 1 TCAACGC 6425 0.0 32.059227 4 ATCAACG 6560 0.0 31.39947 3 CAACGCA 6635 0.0 30.81303 5 TATCAAC 6740 0.0 30.34966 2 AACGCAG 6985 0.0 29.539154 6 GTACATG 8725 0.0 27.566874 1 TACATGG 9075 0.0 26.04469 2 ACATGGG 9350 0.0 24.517262 3 ACGCAGA 8410 0.0 24.251354 7 CGCAGAG 8575 0.0 23.562944 8 CATGGGG 7605 0.0 21.717833 4 CTAGCGA 175 4.0815994E-6 21.696436 4 GTGGTAT 1490 0.0 20.09818 1 GCAGAGT 9400 0.0 19.97763 9 ATGGGGG 4765 0.0 19.457119 5 TAAGGTG 1445 0.0 19.412928 5 GAGTACA 6750 0.0 19.36562 1 AGAGTAC 8160 0.0 18.702066 10-11 >>END_MODULE