##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921414_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3047291 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.487707934686906 33.0 31.0 34.0 30.0 34.0 2 31.618398439794557 34.0 31.0 34.0 30.0 34.0 3 31.69147580588792 34.0 31.0 34.0 29.0 34.0 4 35.182633690054544 37.0 35.0 37.0 33.0 37.0 5 34.94074638752912 37.0 35.0 37.0 32.0 37.0 6 34.90542058503766 37.0 35.0 37.0 32.0 37.0 7 34.77537524312578 37.0 35.0 37.0 32.0 37.0 8 34.743956189284184 37.0 35.0 37.0 32.0 37.0 9 36.379756314707066 39.0 37.0 39.0 32.0 39.0 10-11 36.228045336004996 39.0 37.0 39.0 32.0 39.0 12-13 36.16354591668469 39.0 37.0 39.0 32.0 39.0 14-15 37.42706735260926 40.0 38.0 41.0 32.0 41.0 16-17 37.409080721204504 40.0 38.0 41.0 32.0 41.0 18-19 37.375306460722 40.0 38.0 41.0 32.0 41.0 20-21 37.34272210957208 40.0 38.0 41.0 32.0 41.0 22-23 37.23910401074266 40.0 38.0 41.0 31.0 41.0 24-25 37.18136502224435 40.0 38.0 41.0 31.0 41.0 26-27 37.0535073611283 40.0 37.5 41.0 31.0 41.0 28-29 36.90678097365824 40.0 37.0 41.0 30.0 41.0 30-31 36.77871099281296 40.0 37.0 41.0 30.0 41.0 32-33 36.73876699009054 40.0 37.0 41.0 30.0 41.0 34-35 36.87304740505583 40.0 37.0 41.0 30.0 41.0 36-37 36.85839849230021 40.0 37.0 41.0 30.0 41.0 38-39 36.78291866447937 40.0 37.0 41.0 30.0 41.0 40-41 36.6737948558244 40.0 37.0 41.0 30.0 41.0 42-43 36.58675115044805 40.0 37.0 41.0 30.0 41.0 44-45 36.467375449210465 40.0 37.0 41.0 30.0 41.0 46-47 36.32889507434636 40.0 36.5 41.0 29.5 41.0 48-49 36.18705515817163 40.0 36.0 41.0 29.0 41.0 50-51 36.049823433338005 40.0 36.0 41.0 28.0 41.0 52-53 35.8932911231648 40.0 35.5 41.0 28.0 41.0 54-55 35.698728149034665 39.0 35.0 41.0 28.0 41.0 56-57 35.45120961536 39.0 35.0 41.0 27.0 41.0 58-59 35.239889790636994 39.0 35.0 41.0 27.0 41.0 60-61 34.98161875580639 38.5 35.0 40.0 26.5 41.0 62-63 34.697300651627955 38.0 34.5 40.0 26.0 41.0 64-65 34.39659832290385 37.0 34.0 40.0 26.0 41.0 66-67 34.070962865049644 37.0 34.0 40.0 26.0 41.0 68-69 33.71397414949868 36.0 34.0 39.0 25.5 41.0 70-71 33.33433909003111 36.0 34.0 39.0 25.0 40.5 72-73 32.934808818718 35.0 33.5 38.5 24.0 40.0 74-75 32.523293147914 35.0 33.0 37.0 22.5 39.5 76-77 29.753617721445046 33.0 29.0 34.5 18.5 36.5 78-79 31.40270784772442 34.5 31.5 36.0 20.5 38.5 80-81 31.588798706785795 35.0 33.0 36.0 21.0 37.0 82-83 31.411956390118306 35.0 33.0 35.5 20.5 37.0 84-85 31.16883011829195 35.0 32.5 35.0 20.0 37.0 86-87 30.910851966549963 35.0 32.0 35.0 18.5 36.0 88-89 30.629010652412255 35.0 32.0 35.0 17.5 36.0 90-91 30.4418562257428 35.0 32.0 35.0 12.5 35.5 92-93 30.293321838971075 34.5 32.0 35.0 8.5 35.0 94-95 30.195895633203392 34.0 32.0 35.0 4.5 35.0 96-97 30.01155173562354 34.0 32.0 35.0 2.0 35.0 98-99 29.757967322451318 34.0 31.5 35.0 2.0 35.0 100-101 28.682931003307527 33.5 29.0 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 52163.0 3 17201.0 4 9506.0 5 6640.0 6 5689.0 7 6081.0 8 5959.0 9 6440.0 10 7289.0 11 7940.0 12 8409.0 13 9288.0 14 10198.0 15 11218.0 16 12016.0 17 12829.0 18 12232.0 19 10676.0 20 10260.0 21 10176.0 22 10997.0 23 12404.0 24 14573.0 25 17350.0 26 21408.0 27 25704.0 28 30829.0 29 37229.0 30 45550.0 31 56948.0 32 72059.0 33 95810.0 34 138870.0 35 205098.0 36 359668.0 37 721295.0 38 829287.0 39 119996.0 40 6.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.52860468005471 19.687479253037026 13.917769391713836 25.866146675194422 2 14.610373841589878 20.508289359691265 38.92691186894542 25.954424929773438 3 17.882541897516244 24.61384316384418 29.07739808432866 28.426216854310915 4 12.808245027353248 16.83043610957052 35.88227765434813 34.4790412087281 5 13.924489407377743 37.51068453221116 34.54127085207092 14.023555208340172 6 33.46384432142654 35.928884145819204 16.888784751380996 13.718486781373256 7 28.820896786053936 31.822949106777777 20.82048855340595 18.535665553762335 8 26.231298589210528 36.37926904106352 19.210955523541053 18.178476846184896 9 26.175937906816248 16.10292551646692 19.316960539705594 38.40417603701123 10-11 25.65685131846588 25.748617673802553 27.665396249323294 20.929134758408274 12-13 26.003104081231825 22.798277216867444 27.741097507169105 23.457521194731626 14-15 23.02923216803619 24.588203460628456 24.944771357604782 27.43779301373057 16-17 23.487283590004605 27.751951492526295 25.607549413690815 23.153215503778284 18-19 23.394703373943873 27.19102399369667 26.890132657670556 22.524139974688897 20-21 23.90008962117252 26.250422098986277 26.954511101900685 22.894977177940522 22-23 23.62284697548603 26.08430198311086 26.64841105995078 23.64443998145233 24-25 23.47560130183272 26.273212584820538 26.66194108279863 23.589245030548113 26-27 23.365163178893358 26.44611392289788 26.653878939384366 23.534843958824396 28-29 23.413619342154988 26.76961312703565 26.40029300129583 23.416474529513533 30-31 23.853383847318494 26.37501874909947 26.429994226754317 23.34160317682772 32-33 23.601944452923227 26.377804931763304 26.35816150669829 23.662089108615174 34-35 23.789991998482403 26.492653897933714 26.477638744936694 23.239715358647185 36-37 23.751526570573052 26.449842096445952 26.533621963123405 23.26500936985759 38-39 23.725624002083165 26.518929716299965 26.39334253387154 23.36210374774533 40-41 23.938937625742643 26.28670790853016 26.34584520304488 23.428509262682315 42-43 23.643444752814094 26.318296661813307 26.289990395560793 23.74826818981181 44-45 23.602486408555436 26.420166682775164 26.394108653776254 23.58323825489314 46-47 23.748903021523425 26.316111619077876 26.222675636345972 23.712309723052726 48-49 23.510399393488367 26.486080672939096 26.313858282059087 23.68966165151345 50-51 23.70486509370339 26.4471311387985 26.294265231210506 23.553738536287604 52-53 23.90123449497545 26.3268573048774 26.210407588773833 23.561500611373315 54-55 23.414547063139835 26.190574639316267 26.59903887679062 23.79583942075328 56-57 23.54433138115794 26.305616774695135 26.32629207937282 23.823759764774106 58-59 23.6359790568562 26.357908396473068 26.42348084344283 23.5826317032279 60-61 23.776064502916913 26.361396049170082 26.452762929201167 23.40977651871183 62-63 23.695158415744093 26.29734174016076 26.465472818398744 23.542027025696402 64-65 23.45788518832144 26.151933818186475 26.44608578942816 23.944095204063927 66-67 23.475174580913887 26.336916214292653 26.308519732436203 23.879389472357257 68-69 23.460886186204768 26.2547405796904 26.43001093244517 23.85436230165966 70-71 23.466886978035397 26.1044513577186 26.369570241812845 24.059091422433152 72-73 23.443942949990973 26.314546439298198 26.243266753106077 23.998243857604752 74-75 23.375863938825777 26.36485594017027 26.260063968236462 23.999216152767495 76-77 23.35258259723773 26.093616590125222 26.391393804279907 24.162407008357135 78-79 23.302115611203572 26.08887117049546 26.45052561891414 24.15848759938683 80-81 23.485633392067925 26.260633502882747 26.13213756207066 24.121595542978667 82-83 23.48953768893703 26.337912132998536 26.256741010618217 23.915809167446213 84-85 23.492608155509483 26.343775138106224 26.159272414881478 24.004344291502814 86-87 23.259715441660546 26.44732980847218 26.171314032482435 24.12164071738484 88-89 23.207346518142877 26.262390783751005 26.26686571328732 24.2633969848188 90-91 23.340172991498576 26.15241655575885 26.28723436652502 24.220176086217553 92-93 23.35390495552665 26.117554894186085 26.359354769124543 24.169185381162723 94-95 23.30873431849724 26.07972522439887 26.299226061412977 24.312314395690912 96-97 23.04256124618906 25.9903763900419 26.436866863987373 24.53019549978167 98-99 22.935250386742652 25.915203432870204 26.359358581486365 24.79018759890078 100-101 22.976758182679465 26.02574227306014 26.33260967408424 24.664889870176154 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 24.0 1 21.0 2 27.0 3 40.5 4 38.0 5 39.0 6 75.0 7 186.5 8 295.5 9 347.5 10 314.5 11 247.0 12 271.0 13 306.5 14 324.0 15 369.0 16 435.5 17 493.0 18 554.5 19 624.0 20 696.0 21 847.5 22 1082.0 23 1369.5 24 1790.5 25 2385.5 26 3409.5 27 5065.0 28 7516.0 29 11442.5 30 16778.0 31 23205.0 32 31320.5 33 38548.5 34 44889.5 35 51882.0 36 60334.0 37 68954.5 38 76118.5 39 83424.5 40 89806.5 41 95438.5 42 101157.5 43 107304.0 44 113674.0 45 120412.5 46 125510.0 47 129311.0 48 133293.5 49 135232.5 50 134544.0 51 132112.0 52 129591.5 53 126344.5 54 121581.0 55 114305.5 56 104533.5 57 93682.5 58 83156.5 59 71601.0 60 58584.0 61 47535.5 62 38552.0 63 29092.5 64 20483.5 65 14656.5 66 10638.5 67 7959.5 68 5897.0 69 4374.0 70 3254.0 71 2356.5 72 1622.0 73 1137.5 74 841.5 75 591.5 76 415.0 77 262.0 78 142.0 79 78.5 80 51.5 81 32.5 82 14.5 83 13.5 84 8.5 85 3.5 86 4.5 87 4.0 88 3.0 89 2.0 90 2.0 91 1.5 92 0.5 93 0.5 94 0.5 95 1.5 96 1.5 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.15348058324590597 2 3.6097635572054E-4 3 0.006989814888043183 4 0.00397073991292594 5 0.027270122873069885 6 0.0012470092288527745 7 2.9534429104407817E-4 8 0.0020017779726320853 9 0.0 10-11 0.10327205376841266 12-13 4.1020040422788635E-4 14-15 0.006087373998741833 16-17 2.6252825870584726E-4 18-19 3.7738437188965544E-4 20-21 6.563206467646182E-4 22-23 2.6252825870584726E-4 24-25 0.0015915775684041992 26-27 0.003232379185315744 28-29 0.006743694645506452 30-31 0.015686063457674374 32-33 0.015423535198968528 34-35 0.012109115932807205 36-37 6.399126305955026E-4 38-39 1.8048817786027E-4 40-41 0.004741916672874366 42-43 0.008614208488785613 44-45 0.008056335939035687 46-47 0.009352569216395809 48-49 0.01176454759325578 50-51 0.00577562169152864 52-53 0.001739249713926238 54-55 7.547687437793109E-4 56-57 0.005824845740035986 58-59 0.009172081038535538 60-61 0.007711767599484264 62-63 0.01840979414174754 64-65 0.03532645881210557 66-67 0.037377460833245 68-69 0.028041299633018307 70-71 0.04262802600736195 72-73 0.027598283196452193 74-75 0.025563689191481876 76-77 0.24397079241857766 78-79 0.06953717252471128 80-81 0.054786365988676505 82-83 0.021035076728806012 84-85 0.032635544160370636 86-87 0.08327068205826092 88-89 0.2670240551361849 90-91 0.3235168548064494 92-93 0.05219389943395626 94-95 0.004922404850734636 96-97 0.010025297879329542 98-99 0.001476721455220391 100-101 0.0015259455037277374 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3047291.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 63.87873270168352 #Duplication Level Percentage of deduplicated Percentage of total 1 79.84499352726947 51.00396999096096 2 11.774353829611064 15.042616020335378 3 3.5968089375635506 6.8927879010494495 4 1.5959130767794556 4.077796193868647 5 0.8390882262610911 2.679994625923099 6 0.517589730255234 1.9837785616866344 7 0.3655605637535129 1.6346081876801168 8 0.2483851540989485 1.269322309260256 9 0.19450627981930424 1.1182333191638574 >10 0.9682030813052696 10.768347583927133 >50 0.04181518436691293 1.7828376493237164 >100 0.01185463463825001 1.301944169254812 >500 8.246882472435542E-4 0.36662015396525593 >1k 1.0308603072844664E-4 0.0771433336005384 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 6.563206467646182E-5 2 0.0 0.0 0.0 3.281603233823091E-5 6.563206467646182E-5 3 0.0 0.0 0.0 3.281603233823091E-5 6.563206467646182E-5 4 0.0 0.0 0.0 3.281603233823091E-5 6.563206467646182E-5 5 0.0 0.0 0.0 3.281603233823091E-5 6.563206467646182E-5 6 0.0 0.0 0.0 3.281603233823091E-5 1.6408016169115454E-4 7 0.0 0.0 0.0 3.281603233823091E-5 1.6408016169115454E-4 8 0.0 0.0 0.0 3.281603233823091E-5 1.6408016169115454E-4 9 0.0 0.0 0.0 3.281603233823091E-5 1.6408016169115454E-4 10-11 0.0 0.0 0.0 6.563206467646182E-5 1.6408016169115454E-4 12-13 0.0 0.0 0.0 8.204008084557727E-5 1.6408016169115454E-4 14-15 0.0 0.0 0.0 1.3126412935292363E-4 2.133042101985009E-4 16-17 0.0 0.0 0.0 1.6408016169115454E-4 2.6252825870584726E-4 18-19 0.0 0.0 0.0 1.6408016169115454E-4 2.6252825870584726E-4 20-21 0.0 0.0 0.0 1.6408016169115454E-4 2.9534429104407817E-4 22-23 0.0 0.0 0.0 1.9689619402938545E-4 3.117523072131936E-4 24-25 0.0 0.0 0.0 2.9534429104407817E-4 3.6097635572054E-4 26-27 0.0 0.0 0.0 4.1020040422788635E-4 3.6097635572054E-4 28-29 0.0 0.0 0.0 0.0011649691480071973 3.6097635572054E-4 30-31 0.0 3.281603233823091E-5 0.0 0.004725508656705251 3.7738437188965544E-4 32-33 0.0 3.281603233823091E-5 0.0 0.013126412935292363 4.266084203970018E-4 34-35 0.0 4.922404850734636E-5 0.0 0.024841736480040795 4.594244527352327E-4 36-37 0.0 6.563206467646182E-5 0.0 0.04423601159193526 4.922404850734636E-4 38-39 0.0 6.563206467646182E-5 0.0 0.07944761429085703 4.922404850734636E-4 40-41 0.0 6.563206467646182E-5 0.0 0.12274836896115271 5.250565174116945E-4 42-43 0.0 6.563206467646182E-5 0.0 0.1662624278416469 5.414645335808099E-4 44-45 0.0 6.563206467646182E-5 0.0 0.21852195934027963 5.742805659190409E-4 46-47 0.0 6.563206467646182E-5 0.0 0.2820537979470946 6.563206467646182E-4 48-49 0.0 6.563206467646182E-5 0.0 0.35449518933373936 7.2195271144108E-4 50-51 0.0 6.563206467646182E-5 0.0 0.4338607635437508 7.2195271144108E-4 52-53 0.0 6.563206467646182E-5 0.0 0.5155890920821149 8.368088246248882E-4 54-55 0.0 6.563206467646182E-5 0.0 0.6111986022995506 9.352569216395808E-4 56-57 0.0 6.563206467646182E-5 0.0 0.720246277759492 9.680729539778118E-4 58-59 0.0 6.563206467646182E-5 0.0 0.8429126066397991 0.001017297002485158 60-61 0.0 9.844809701469272E-5 0.0 0.9786069003583839 0.001050113034823389 62-63 0.0 9.844809701469272E-5 0.0 1.1296426891950917 0.0010829290671616199 64-65 0.0 9.844809701469272E-5 0.0 1.2838944492009459 0.0010829290671616199 66-67 0.0 9.844809701469272E-5 0.0 1.4636442663336058 0.0010829290671616199 68-69 0.0 9.844809701469272E-5 0.0 1.6635923513704467 0.0010829290671616199 70-71 0.0 9.844809701469272E-5 0.0 1.8820979026945572 0.0010829290671616199 72-73 0.0 9.844809701469272E-5 0.0 2.1129094661455046 0.0011649691480071973 74-75 0.0 9.844809701469272E-5 0.0 2.3521711579235456 0.0011813771641763127 76-77 0.0 9.844809701469272E-5 0.0 2.622624488439076 0.001197785180345428 78-79 0.0 9.844809701469272E-5 0.0 2.92935594270452 0.0012141931965145435 80-81 0.0 9.844809701469272E-5 0.0 3.255301183903999 0.0012470092288527743 82-83 0.0 9.844809701469272E-5 0.0 3.6005914761668643 0.0013126412935292363 84-85 0.0 9.844809701469272E-5 0.0 3.958712837073978 0.0013126412935292363 86-87 0.0 9.844809701469272E-5 0.0 4.341561078347949 0.0013126412935292363 88-89 0.0 9.844809701469272E-5 0.0 4.76669277728973 0.0013126412935292363 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2265 0.0 49.51825 1 GTATCAA 4070 0.0 38.650494 1 TCAACGC 4805 0.0 32.097897 4 CAACGCA 4970 0.0 31.375887 5 ATCAACG 5125 0.0 30.186329 3 AACGCAG 5240 0.0 29.937202 6 TATCAAC 5295 0.0 28.948305 2 GTATAGG 950 0.0 26.513908 1 GTACATG 8065 0.0 26.163755 1 TACATGG 8175 0.0 24.903255 2 GTATAGC 945 0.0 23.636736 1 ACGCAGA 6575 0.0 23.207624 7 ACATGGG 8730 0.0 22.613392 3 CGCAGAG 6770 0.0 22.11787 8 CATGGGG 7415 0.0 21.05578 4 ATGGGGG 4790 0.0 18.163273 5 GCAGAGT 8020 0.0 17.722225 9 AGAGTAC 6715 0.0 17.662247 10-11 TATAGGG 710 0.0 17.378073 2 GAGTACA 6075 0.0 16.037218 1 >>END_MODULE