##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921413_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3153833 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.552639597594418 31.0 31.0 34.0 27.0 34.0 2 30.60508213339134 33.0 31.0 34.0 27.0 34.0 3 30.659273335018057 33.0 31.0 34.0 27.0 34.0 4 34.118232005309096 37.0 35.0 37.0 30.0 37.0 5 34.11148148934963 37.0 35.0 37.0 30.0 37.0 6 34.16196006573588 37.0 35.0 37.0 30.0 37.0 7 34.08096877672344 37.0 35.0 37.0 30.0 37.0 8 34.04524209113165 37.0 35.0 37.0 30.0 37.0 9 35.61932004643239 39.0 37.0 39.0 30.0 39.0 10-11 35.513215347800596 39.0 37.0 39.0 30.0 39.0 12-13 35.40238021480529 39.0 37.0 39.0 30.0 39.0 14-15 36.5615465371819 40.0 37.0 41.0 29.5 41.0 16-17 36.51039164090172 40.0 37.0 41.0 29.0 41.0 18-19 36.45084505108545 40.0 37.0 41.0 29.0 41.0 20-21 36.38644944104523 40.0 37.0 41.0 28.5 41.0 22-23 36.272151854584564 40.0 37.0 41.0 28.0 41.0 24-25 36.176789798318424 40.0 36.5 41.0 27.0 41.0 26-27 36.036893995338374 40.0 36.0 41.0 27.0 41.0 28-29 35.89685741128335 40.0 36.0 41.0 27.0 41.0 30-31 35.756536569945204 40.0 36.0 41.0 27.0 41.0 32-33 35.58402585044928 40.0 35.5 41.0 26.0 41.0 34-35 35.42085424307501 39.0 35.0 41.0 25.0 41.0 36-37 35.257502378851385 39.0 35.0 41.0 25.0 41.0 38-39 35.498988215292314 39.5 35.0 41.0 25.5 41.0 40-41 35.62270402396069 40.0 35.5 41.0 26.0 41.0 42-43 35.463359981330655 40.0 35.0 41.0 25.0 41.0 44-45 35.34989994714368 40.0 35.0 41.0 24.5 41.0 46-47 35.19981067482013 40.0 35.0 41.0 24.0 41.0 48-49 35.055303498948746 39.5 35.0 41.0 24.0 41.0 50-51 33.32881972507739 37.0 32.5 39.5 20.5 40.0 52-53 33.48617095451789 37.5 33.5 39.5 21.0 40.0 54-55 34.345469306713454 39.0 34.0 40.5 22.0 41.0 56-57 34.34977549540511 39.0 34.0 41.0 22.0 41.0 58-59 34.16170165002396 38.0 34.0 41.0 21.5 41.0 60-61 33.906025461715956 38.0 34.0 40.0 20.0 41.0 62-63 33.60780088863298 37.0 34.0 40.0 19.5 41.0 64-65 33.3082939077624 37.0 34.0 40.0 18.0 41.0 66-67 32.95871373024507 36.0 33.0 39.0 17.0 41.0 68-69 32.58721118080761 36.0 33.0 39.0 13.5 41.0 70-71 32.207339925734814 35.0 33.0 38.5 11.0 40.5 72-73 31.85054566934901 35.0 32.5 37.5 7.5 40.0 74-75 31.45412296719579 35.0 32.0 37.0 6.0 39.0 76-77 31.092854948248686 35.0 32.0 36.5 2.0 39.0 78-79 30.762170983688737 35.0 32.0 36.0 2.0 38.0 80-81 30.428322140075267 35.0 31.5 35.5 2.0 37.0 82-83 30.14558491207366 35.0 31.0 35.0 2.0 37.0 84-85 29.925331334918496 35.0 31.0 35.0 2.0 36.0 86-87 29.715530594042235 35.0 31.0 35.0 2.0 36.0 88-89 29.53114828844774 35.0 31.0 35.0 2.0 36.0 90-91 29.29232730458461 35.0 31.0 35.0 2.0 35.0 92-93 29.114928564702062 34.5 31.0 35.0 2.0 35.0 94-95 28.916712298970808 34.0 30.0 35.0 2.0 35.0 96-97 28.674832338934877 34.0 30.0 35.0 2.0 35.0 98-99 28.462832527911274 34.0 30.0 35.0 2.0 35.0 100-101 27.421481733496986 33.5 27.5 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 100207.0 3 17589.0 4 12196.0 5 9316.0 6 8623.0 7 8534.0 8 9154.0 9 9835.0 10 10611.0 11 11228.0 12 11573.0 13 11399.0 14 12401.0 15 12939.0 16 13207.0 17 13530.0 18 13057.0 19 12099.0 20 12414.0 21 13266.0 22 14291.0 23 16461.0 24 19465.0 25 23034.0 26 27536.0 27 32379.0 28 38551.0 29 45845.0 30 54757.0 31 66897.0 32 84036.0 33 109509.0 34 154591.0 35 226751.0 36 383760.0 37 699968.0 38 713237.0 39 119567.0 40 20.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.05982082779349 17.36540908576111 12.392823594465135 25.181946491980266 2 16.317070230208888 18.96342546765146 39.072438386761085 25.647065915378565 3 19.9287614982165 22.799873613203108 28.674131439730882 28.59723344884951 4 13.6753096654189 14.770635187280837 35.58638858564526 35.96766656165501 5 14.715547714950365 36.82676284344109 33.86364220361894 14.594047237989615 6 34.87232049360572 33.97576369539585 16.634330029055405 14.517585781943026 7 30.177661908022234 31.171018494939823 20.02759605739802 18.62372353963992 8 27.571080303911096 34.47552121539066 19.195987262297905 18.757411218400343 9 27.35612994972025 15.457455668253859 18.67429415208499 38.512120229940905 10-11 26.478563018580697 24.77158068748984 27.042921534503332 21.706934759426126 12-13 26.780898450545955 21.94274381469604 27.142848987144287 24.133508747613718 14-15 23.851011158397476 23.613892039903263 24.19783950382309 28.33725729787617 16-17 24.303937425692453 26.80427085317313 25.01976380488886 23.872027916245553 18-19 24.374129623362993 26.144694932493184 26.23782582730776 23.243349616836063 20-21 24.75656378628232 25.349716554043123 26.274602899731114 23.619116759943445 22-23 24.658398156763308 25.050606211819314 25.997412667208287 24.293582964209094 24-25 24.374459743024044 25.33376580326002 25.9419464636067 24.349827990109233 26-27 24.180448757391645 25.491962279614473 26.006443624313487 24.321145338680395 28-29 24.3058163135862 25.7996638335659 25.756009767854877 24.138510084993023 30-31 24.650956297691014 25.483254385095627 25.64552175205629 24.220267565157073 32-33 24.359458351732073 25.540106341400765 25.63149620781206 24.468939099055103 34-35 24.626443023464144 25.595736213487402 25.745520503181353 24.0323002598671 36-37 24.640761876375823 25.47731025424152 25.744147720561834 24.137780148820827 38-39 24.545362444046773 25.597004856453903 25.682097044413936 24.175535655085387 40-41 24.612264498989052 25.406752673858897 25.771844342339552 24.209138484812502 42-43 24.448223036732905 25.368226043081354 25.6704180874126 24.513132832773138 44-45 24.34445725697854 25.455790588511512 25.829893991327474 24.369858163182474 46-47 24.52891577270904 25.455126041075054 25.59845581314068 24.41750237307523 48-49 24.35543518719009 25.574149001286944 25.614420649839843 24.455995161683123 50-51 24.3533085543434 25.579374501278746 25.77092794441932 24.296388999958538 52-53 24.602344200044673 25.460234102267464 25.673562724620204 24.26385897306766 54-55 24.087059563281926 25.27673972414277 26.027808134326495 24.608392578248804 56-57 24.23689222035058 25.470063715317004 25.802510798492644 24.490533265839776 58-59 24.332588989591102 25.385744029958047 25.88568564226856 24.395981338182292 60-61 24.35988184560708 25.38414398044806 25.974042069026993 24.28193210491787 62-63 24.348766392256216 25.374349894454667 26.003459179552262 24.27342453373685 64-65 24.15050140229948 25.19768196368956 25.96935977227648 24.68245686173448 66-67 24.178595440143464 25.37603755863771 25.806709386990466 24.63865761422836 68-69 24.198845244162356 25.304241814972173 25.902748740838273 24.594164200027198 70-71 24.162421906283253 25.14113772020431 25.926693045094655 24.769747328417782 72-73 24.128817410498986 25.395823127202853 25.80198740762062 24.673372054677536 74-75 24.012077616221163 25.47676180352207 25.917425144735372 24.593735435521396 76-77 24.05441605026637 25.094123952294222 25.96343819365882 24.88802180378059 78-79 23.94280709693329 25.072231557913632 26.092975012266333 24.891986332886745 80-81 24.08973782847714 25.292970177647632 25.824327218942813 24.79296477493242 82-83 24.081482378387722 25.30541511380946 25.91564151872216 24.69746098908066 84-85 24.023773038791035 25.31209899204197 25.949659935717968 24.71446803344903 86-87 23.84384913165025 25.39828267290991 25.964278159884547 24.79359003555529 88-89 23.778823608684498 25.14214545638314 26.08887599169678 24.99015494323558 90-91 23.880968219818456 25.073269323125263 26.108209437908837 24.93755301914744 92-93 23.932294261584747 25.000099327007874 26.184267968692765 24.883338442714617 94-95 23.89370839838625 24.84803326555592 26.230956376785635 25.0273019592722 96-97 23.76962909747476 24.736604531699005 26.338529613712076 25.155236757114157 98-99 23.57327662928777 24.72221692475907 26.310756604877056 25.393749841076108 100-101 23.767625305261586 24.660145412990218 26.427384497280958 25.144844784467242 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 38.0 1 33.0 2 55.0 3 91.0 4 88.5 5 95.0 6 175.0 7 332.5 8 503.5 9 620.0 10 589.5 11 524.5 12 555.5 13 602.5 14 697.0 15 782.5 16 864.5 17 942.0 18 1018.5 19 1149.5 20 1306.0 21 1442.5 22 1587.0 23 1773.0 24 1973.0 25 2323.5 26 2819.0 27 3565.5 28 4760.5 29 6588.0 30 9519.0 31 13961.5 32 20318.5 33 25891.0 34 31008.5 35 37572.5 36 46016.0 37 54891.0 38 63052.5 39 71493.0 40 79119.5 41 85848.0 42 92836.5 43 100524.5 44 108557.0 45 117554.5 46 124489.0 47 130528.5 48 137739.5 49 141638.5 50 142458.0 51 142661.0 52 142348.0 53 141517.5 54 139750.5 55 134818.0 56 126030.5 57 114557.5 58 103241.5 59 90502.5 60 75129.5 61 62346.5 62 51693.0 63 40097.0 64 29235.0 65 21228.0 66 15660.0 67 12005.5 68 9246.0 69 7039.5 70 5459.0 71 4047.5 72 2929.0 73 2288.5 74 1833.5 75 1406.5 76 1047.0 77 740.0 78 480.5 79 325.5 80 254.0 81 187.0 82 131.0 83 106.0 84 88.5 85 78.0 86 63.0 87 51.0 88 51.0 89 45.0 90 38.5 91 32.0 92 25.5 93 27.0 94 25.5 95 19.0 96 13.0 97 11.0 98 12.5 99 9.0 100 5.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.05295144035844637 2 0.060656350542340066 3 0.05089045615287809 4 0.057136823668215785 5 0.050161184818600095 6 0.01734397477608992 7 0.015346405469154518 8 0.021370820839277157 9 0.021402528288593594 10-11 0.02205253099958051 12-13 0.029044023573854418 14-15 0.04467579608685685 16-17 0.03086720190954943 18-19 0.023590342291427605 20-21 0.026983039368286145 22-23 0.049209961339107045 24-25 0.044327014144376065 26-27 0.03009036940129677 28-29 0.020070815417303326 30-31 0.012540296204650024 32-33 0.009845163012753053 34-35 0.009448819896297617 36-37 0.0012841516973156155 38-39 0.006167098892046598 40-41 0.003313428453567453 42-43 0.22697777593169963 44-45 0.19999473656341346 46-47 0.207541109500725 48-49 0.20475085396087872 50-51 0.20319718894437339 52-53 0.20850818670487625 54-55 0.20662159347054837 56-57 0.21770334700664237 58-59 0.21451674835034068 60-61 0.21984359983550175 62-63 0.2170057831216808 64-65 0.21748139486142734 66-67 0.207398425978801 68-69 0.20613012800614364 70-71 0.18810444306975035 72-73 0.1970617975016432 74-75 0.19633252616736524 76-77 0.1941130047152148 78-79 0.2222375122588926 80-81 0.23041803418253284 82-83 0.22873753936876176 84-85 0.22433020391377728 86-87 0.24118271322546248 88-89 0.2404692956158427 90-91 0.239835146629514 92-93 0.2428632080392335 94-95 0.2535486184588721 96-97 0.2534376423862646 98-99 0.24329125860500542 100-101 0.2525656875300626 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3153833.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.979503899148895 #Duplication Level Percentage of deduplicated Percentage of total 1 77.79286812780435 44.32599032814205 2 11.953731886457996 13.622354252676278 3 3.9605703731275588 6.770140050554262 4 1.866268439865346 4.253561993846641 5 1.0690603896065491 3.045726531900601 6 0.6867548461300982 2.3478570259697595 7 0.47405936801854104 1.8908167325908367 8 0.3431428333104467 1.5641686726862079 9 0.28409731887896456 1.4568951859921537 >10 1.4689270354591921 15.014528252587994 >50 0.07675169215742059 2.9670614209584993 >100 0.0223690869867022 2.0384016370539246 >500 9.510494943168512E-4 0.39466497369217995 >1k 4.475527025463965E-4 0.30783294134869127 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 3.1707449316434956E-5 0.0 5 0.0 0.0 0.0 3.1707449316434956E-5 0.0 6 0.0 0.0 0.0 3.1707449316434956E-5 0.0 7 0.0 0.0 0.0 3.1707449316434956E-5 0.0 8 0.0 0.0 0.0 3.1707449316434956E-5 0.0 9 0.0 0.0 0.0 3.1707449316434956E-5 0.0 10-11 0.0 0.0 0.0 3.1707449316434956E-5 0.0 12-13 0.0 1.5853724658217478E-5 0.0 3.1707449316434956E-5 4.7561173974652434E-5 14-15 0.0 4.7561173974652434E-5 0.0 3.1707449316434956E-5 7.926862329108739E-5 16-17 0.0 6.341489863286991E-5 0.0 6.341489863286991E-5 9.512234794930487E-5 18-19 0.0 6.341489863286991E-5 0.0 6.341489863286991E-5 9.512234794930487E-5 20-21 0.0 6.341489863286991E-5 0.0 7.926862329108739E-5 1.2682979726573982E-4 22-23 0.0 6.341489863286991E-5 0.0 1.9024469589860974E-4 1.2682979726573982E-4 24-25 0.0 6.341489863286991E-5 0.0 3.32928217822567E-4 1.2682979726573982E-4 26-27 0.0 6.341489863286991E-5 0.0 7.292713342780039E-4 1.5853724658217478E-4 28-29 0.0 6.341489863286991E-5 0.0 0.0032183061056181477 1.5853724658217478E-4 30-31 0.0 6.341489863286991E-5 0.0 0.012778102074523286 1.5853724658217478E-4 32-33 0.0 6.341489863286991E-5 0.0 0.03316599198499096 1.5853724658217478E-4 34-35 0.0 6.341489863286991E-5 0.0 0.05999049410669493 1.5853724658217478E-4 36-37 0.0 9.512234794930487E-5 0.0 0.10300164910443894 1.5853724658217478E-4 38-39 0.0 1.2682979726573982E-4 0.0 0.17391535950064574 1.9024469589860974E-4 40-41 0.0 1.2682979726573982E-4 0.0 0.25524496699730137 1.9024469589860974E-4 42-43 0.0 1.5853724658217478E-4 0.0 0.339412391207778 1.9024469589860974E-4 44-45 0.0 1.5853724658217478E-4 0.0 0.44146281683272387 2.219521452150447E-4 46-47 0.0 1.5853724658217478E-4 0.0 0.5577974483747237 2.5365959453147965E-4 48-49 0.0 1.5853724658217478E-4 0.0 0.682772359855452 2.5365959453147965E-4 50-51 0.0 1.5853724658217478E-4 0.0 0.8170217002612377 3.1707449316434956E-4 52-53 0.0 1.5853724658217478E-4 0.0 0.9539344664096039 3.4878194248078454E-4 54-55 0.0 1.5853724658217478E-4 0.0 1.1123448831945129 3.804893917972195E-4 56-57 0.0 1.5853724658217478E-4 0.0 1.2894468413514604 3.804893917972195E-4 58-59 0.0 1.5853724658217478E-4 0.0 1.478153725958223 3.804893917972195E-4 60-61 0.0 1.5853724658217478E-4 0.0 1.6888655803905914 3.804893917972195E-4 62-63 0.0 1.5853724658217478E-4 0.0 1.9057445337150063 3.804893917972195E-4 64-65 0.0 1.5853724658217478E-4 0.0 2.1358613471290333 3.804893917972195E-4 66-67 0.0 1.9024469589860974E-4 0.0 2.4040746608967565 3.804893917972195E-4 68-69 0.0 2.2195214521504467E-4 0.0 2.700951508846537 3.804893917972195E-4 70-71 0.0 2.3780586987326216E-4 0.0 3.0135076904832943 3.9634311645543694E-4 72-73 0.0 2.5365959453147965E-4 0.0 3.3431858947509268 4.2805056577187187E-4 74-75 0.0 2.5365959453147965E-4 0.0 3.6853568340492346 4.4390429043008933E-4 76-77 0.0 2.853670438479146E-4 0.0 4.069714534663059 4.914654644047418E-4 78-79 0.0 2.853670438479146E-4 0.0 4.495307773112907 5.707340876958292E-4 80-81 0.0 2.853670438479146E-4 0.0 4.9421608563294255 5.707340876958292E-4 82-83 0.0 2.853670438479146E-4 0.0 5.400460328749176 6.341489863286991E-4 84-85 0.0 2.853670438479146E-4 0.0 5.879464765572559 6.341489863286991E-4 86-87 0.0 2.853670438479146E-4 0.0 6.3960266761112585 6.500027109869166E-4 88-89 0.0 2.853670438479146E-4 0.0 6.959024146173878 6.65856435645134E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2510 0.0 46.506298 1 GTATCAA 4610 0.0 43.643074 1 TCAACGC 5670 0.0 34.481426 4 CAACGCA 5825 0.0 33.724686 5 ATCAACG 5970 0.0 32.82662 3 TATCAAC 6005 0.0 32.478794 2 AACGCAG 6140 0.0 32.139385 6 GTACATG 10170 0.0 28.601572 1 TACATGG 10465 0.0 27.161808 2 ACGCAGA 7340 0.0 26.244127 7 ACATGGG 10945 0.0 24.928864 3 CGCAGAG 7685 0.0 24.69905 8 CATGGGG 9255 0.0 23.073164 4 ATGGGGG 5405 0.0 21.508686 5 GAGTACA 7645 0.0 20.606821 1 GCAGAGT 8825 0.0 20.271729 9 GTATATA 910 0.0 19.814932 1 AGTACAT 7805 0.0 18.604567 2 GTATAGC 785 0.0 18.13435 1 AGAGTAC 7175 0.0 17.989458 10-11 >>END_MODULE