##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921412_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3196389 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.36418940247886 31.0 31.0 34.0 26.0 34.0 2 30.412546157554665 31.0 31.0 34.0 26.0 34.0 3 30.46654740708969 33.0 31.0 34.0 26.0 34.0 4 33.92144291574023 37.0 35.0 37.0 30.0 37.0 5 33.91159524075449 37.0 35.0 37.0 30.0 37.0 6 33.95576351939642 37.0 35.0 37.0 30.0 37.0 7 33.8716435953196 37.0 35.0 37.0 29.0 37.0 8 33.83508046110783 37.0 35.0 37.0 29.0 37.0 9 35.395286681314445 39.0 37.0 39.0 30.0 39.0 10-11 35.28387862053086 39.0 35.0 39.0 29.0 39.0 12-13 35.174304504239004 39.0 35.0 39.0 28.0 39.0 14-15 36.31725597228623 40.0 37.0 41.0 28.0 41.0 16-17 36.26840021661944 40.0 37.0 41.0 27.5 41.0 18-19 36.210584506454 40.0 36.5 41.0 27.0 41.0 20-21 36.14587116899726 40.0 37.0 41.0 27.0 41.0 22-23 36.02775084634567 40.0 36.0 41.0 27.0 41.0 24-25 35.93548860917742 40.0 36.0 41.0 27.0 41.0 26-27 35.79167742098975 40.0 36.0 41.0 27.0 41.0 28-29 35.651716202251976 40.0 36.0 41.0 26.0 41.0 30-31 35.516475935813816 40.0 36.0 41.0 25.5 41.0 32-33 35.348997728374115 39.5 35.0 41.0 25.0 41.0 34-35 35.186566466096586 39.0 35.0 41.0 24.5 41.0 36-37 35.02193584698233 39.0 35.0 41.0 24.0 41.0 38-39 35.25970133797857 39.5 35.0 41.0 24.5 41.0 40-41 35.39385037303032 40.0 35.0 41.0 25.0 41.0 42-43 35.241075163254536 40.0 35.0 41.0 24.0 41.0 44-45 35.13264468123248 40.0 35.0 41.0 23.5 41.0 46-47 34.994027791986525 40.0 35.0 41.0 23.0 41.0 48-49 34.85475657061765 39.5 35.0 41.0 22.5 41.0 50-51 33.14677468856263 37.0 32.5 39.5 18.5 40.0 52-53 33.306895374749445 37.5 33.5 39.5 19.0 40.0 54-55 34.170369282337035 39.0 34.0 40.5 19.5 41.0 56-57 34.18633761410141 39.0 34.0 41.0 19.0 41.0 58-59 34.010597740137385 38.5 34.0 41.0 18.5 41.0 60-61 33.76754034005248 38.0 34.0 40.0 18.0 41.0 62-63 33.47989872321548 37.0 34.0 40.0 14.5 41.0 64-65 33.18727241897028 37.0 33.0 40.0 13.0 41.0 66-67 32.848169293537175 36.0 33.0 39.5 10.0 41.0 68-69 32.47805163889627 36.0 33.0 39.0 7.5 41.0 70-71 32.09828356310825 35.0 32.5 39.0 6.5 40.5 72-73 31.74011986651187 35.0 32.0 37.5 2.0 40.0 74-75 31.33729671200846 35.0 32.0 37.0 2.0 39.0 76-77 30.96604950148433 35.0 32.0 36.5 2.0 39.0 78-79 30.62342130447827 35.0 31.5 36.0 2.0 38.5 80-81 30.278642242855923 35.0 31.0 36.0 2.0 37.0 82-83 29.986561554303933 35.0 31.0 35.0 2.0 37.0 84-85 29.75927804782209 35.0 31.0 35.0 2.0 36.5 86-87 29.542156633626256 35.0 31.0 35.0 2.0 36.0 88-89 29.350636452571948 35.0 31.0 35.0 2.0 36.0 90-91 29.10929161000116 34.5 30.0 35.0 2.0 35.5 92-93 28.928979388929193 34.0 30.0 35.0 2.0 35.0 94-95 28.7294991316764 34.0 30.0 35.0 2.0 35.0 96-97 28.492452733381327 34.0 30.0 35.0 2.0 35.0 98-99 28.27428373079747 34.0 30.0 35.0 2.0 35.0 100-101 27.241444799115502 33.5 27.5 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 114116.0 3 19268.0 4 12933.0 5 9855.0 6 8978.0 7 8958.0 8 9694.0 9 10141.0 10 11028.0 11 11888.0 12 11877.0 13 11883.0 14 12545.0 15 13274.0 16 13446.0 17 13743.0 18 13227.0 19 12666.0 20 12662.0 21 13196.0 22 14915.0 23 17190.0 24 19769.0 25 23692.0 26 28267.0 27 33683.0 28 39797.0 29 47020.0 30 56160.0 31 68463.0 32 85527.0 33 111322.0 34 154126.0 35 225198.0 36 375979.0 37 689285.0 38 734635.0 39 125972.0 40 11.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.500968635855834 17.69349788509027 12.776039307615521 25.029494171438373 2 16.025112461378086 19.16557883566082 39.43270004351324 25.376608659447854 3 19.48355044047458 23.045973125791928 29.017076841404112 28.453399592329383 4 13.421228180068297 15.291255373690834 36.28459423527758 35.002922210963284 5 14.584053267625244 36.8247955386611 34.26990524412658 14.321245949587071 6 34.26256572779649 34.686377808568615 16.890651226188734 14.160405237446163 7 29.703845508775178 31.334375524120166 20.48455613436501 18.477222832739642 8 26.99566789082234 34.864372814231245 19.465608485476608 18.674350809469807 9 26.89423240607226 15.62744081951454 18.989043849635504 38.4892829247777 10-11 26.003690692782527 24.963152528816128 27.603825377721787 21.42933140067956 12-13 26.436207333598293 22.293071667975827 27.44578976851316 23.824931229912718 14-15 23.564789245761293 23.974790214501652 24.57080811256669 27.88961242717037 16-17 23.962999879514115 27.11880690806614 25.302568227089296 23.615624985330452 18-19 24.02750098612324 26.59081119334759 26.420936698946 22.96075112158317 20-21 24.497152987602703 25.694196914054494 26.413014734990792 23.39563536335201 22-23 24.335942060649387 25.513672420932963 26.10438435840364 24.04600116001401 24-25 24.08893928797176 25.741722819198525 26.122058183501522 24.047279709328194 26-27 24.031358189862573 25.87556087580733 26.115332104981086 23.977748829349014 28-29 24.12840423762585 26.019599121257926 25.961364700647383 23.89063194046884 30-31 24.437856658767167 25.8028831201177 25.817385704925748 23.94187451618939 32-33 24.128786231413603 25.84114575103869 25.8624999882669 24.167568029280805 34-35 24.41078115300667 25.88110619956347 25.91057965718176 23.7975329902481 36-37 24.462272449042963 25.738918317471725 25.92118903328474 23.87762020020057 38-39 24.29383312555936 25.883245366384855 25.894915542186826 23.92800596586896 40-41 24.40909506164033 25.723308692218836 25.91576655891654 23.951829687224286 42-43 24.200354445074577 25.717729325069534 25.87597997258327 24.205936257272622 44-45 24.188397850504 25.783371282766065 25.95042089228349 24.07780997444644 46-47 24.343666475941152 25.700493012391934 25.802371789344974 24.15346872232194 48-49 24.126214223828672 25.796308392748337 25.87155198211209 24.2059254013109 50-51 24.196028146891788 25.84112274057551 25.908072715416363 24.05477639711634 52-53 24.314552519398955 25.741685988937906 25.90197553534749 24.04178595631565 54-55 23.965677190142085 25.567978921488248 26.179105900146066 24.2872379882236 56-57 24.051766467685464 25.76778335694393 25.96875562437015 24.211694551000456 58-59 24.115116945532442 25.660887429029383 26.04065156891001 24.18334405652817 60-61 24.25155830957863 25.624962176951975 26.10356287625114 24.019916637218255 62-63 24.139751787470725 25.653305147269776 26.08993933746237 24.117003727797126 64-65 24.002537270073617 25.487680584914123 26.10911107909388 24.400671065918385 66-67 23.97389054079983 25.67455758954493 25.999444439567444 24.3521074300878 68-69 24.045320780525948 25.533461133361246 26.07076677038335 24.35045131572945 70-71 23.960163020470972 25.397837688899727 26.09249121867723 24.54950807195207 72-73 23.9482708922199 25.557822588646662 25.992174425390186 24.501732093743257 74-75 23.833221261381574 25.634664246539486 26.10166728580542 24.43044720627352 76-77 23.918862301682033 25.37277218745107 26.09639639314862 24.61196911771828 78-79 23.853095220102556 25.335601247614157 26.195084109224876 24.61621942305841 80-81 23.928154183168797 25.488070723784528 26.015250294266927 24.56852479877975 82-83 23.896772615485204 25.520633011721188 26.100052291045532 24.482542081748075 84-85 23.947611689064267 25.47826425071934 26.0770823246678 24.497041735548592 86-87 23.7539815259704 25.54692273048315 26.16160510538577 24.537490638160676 88-89 23.726082912830208 25.35438224655379 26.203014763960265 24.716520076655737 90-91 23.757024162255696 25.31458289393525 26.26738350299 24.661009440819058 92-93 23.762780076519725 25.20930957556613 26.37625260353042 24.65165774438373 94-95 23.723096577939135 25.125721689153725 26.39345426976969 24.757727463137453 96-97 23.630235974575893 25.031786407885757 26.443907478380773 24.894070139157577 98-99 23.515611817522046 24.994809338047897 26.460630318860325 25.02894852556973 100-101 23.696748021797166 24.907853246473394 26.554152116560193 24.84124661516925 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 44.0 1 38.5 2 53.5 3 82.5 4 91.0 5 102.0 6 159.5 7 312.5 8 477.0 9 543.0 10 477.0 11 434.0 12 474.5 13 522.5 14 588.0 15 675.0 16 761.5 17 843.0 18 992.0 19 1096.0 20 1157.0 21 1272.5 22 1408.5 23 1601.0 24 1826.5 25 2152.5 26 2669.5 27 3488.5 28 4846.0 29 7102.0 30 10557.5 31 15394.0 32 21962.5 33 28221.5 34 34182.5 35 41484.5 36 51220.5 37 60926.0 38 69519.0 39 78297.5 40 86125.0 41 93750.5 42 101453.0 43 109957.0 44 118621.5 45 126954.0 46 133141.0 47 137687.0 48 142280.0 49 144335.0 50 143878.5 51 142759.0 52 140981.5 53 138768.0 54 135297.5 55 129100.5 56 119457.5 57 106671.0 58 95269.0 59 84140.0 60 70320.5 61 57678.5 62 47100.5 63 36244.5 64 26231.5 65 19230.0 66 14564.5 67 11102.5 68 8451.5 69 6538.5 70 4999.0 71 3676.0 72 2761.5 73 2122.5 74 1649.5 75 1286.5 76 1000.0 77 713.0 78 449.0 79 309.5 80 247.0 81 186.5 82 140.0 83 119.0 84 97.0 85 77.5 86 64.5 87 55.5 88 49.5 89 46.0 90 36.5 91 31.5 92 28.5 93 20.0 94 19.0 95 21.5 96 17.5 97 11.0 98 10.5 99 11.0 100 7.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.05287216293135786 2 0.06128790957546156 3 0.051714606701499716 4 0.05912922363329369 5 0.051714606701499716 6 0.019803597121626937 7 0.017425914054891314 8 0.022431562616439988 9 0.02318240990067229 10-11 0.024496392648078815 12-13 0.030002606065782356 14-15 0.04750673337944787 16-17 0.031097591688621126 18-19 0.024856173638440126 20-21 0.029220473478040375 22-23 0.05005648561548673 24-25 0.04522290622324129 26-27 0.03289649664042768 28-29 0.021414790252375415 30-31 0.012733118528439436 32-33 0.00944816165992312 34-35 0.009166593928336008 36-37 0.0013921960061807246 38-39 0.006491700478258435 40-41 0.0032849568685163165 42-43 0.23340400683396167 44-45 0.20704613862705698 46-47 0.2131780581149541 48-49 0.2111288707350701 50-51 0.2094238216937926 52-53 0.21425740108603802 54-55 0.21242721083072177 56-57 0.22347092296963858 58-59 0.22027982201165128 60-61 0.22512904405565154 62-63 0.22231336673978042 64-65 0.22320499788980627 66-67 0.21327191402548312 68-69 0.21181714741228308 70-71 0.19514208064162403 72-73 0.20221255923481155 74-75 0.20254105492166313 76-77 0.20036672632774044 78-79 0.22719387408729036 80-81 0.23565654868665858 82-83 0.23484313079540695 84-85 0.23016597792070992 86-87 0.2475606066720915 88-89 0.24551141929220754 90-91 0.24532370747114948 92-93 0.24809245683175607 94-95 0.25952723526454385 96-97 0.26005908542420836 98-99 0.2493751542756529 100-101 0.2586668894180277 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3196389.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 60.33056648911052 #Duplication Level Percentage of deduplicated Percentage of total 1 78.71459056523636 47.48895839759103 2 11.896305011463873 14.354216409377196 3 3.838443511518973 6.947264144591707 4 1.7274753830958216 4.1687827383265645 5 0.9742922687932146 2.938980225112768 6 0.6186783669706377 2.239512981233782 7 0.40973838189030143 1.730382408424137 8 0.31152504147603166 1.5035585782234109 9 0.22666170430339755 1.2307166119810107 >10 1.2014718647401046 12.833013323121836 >50 0.06287720996832019 2.541654115413432 >100 0.017159877339980836 1.6768499490123716 >500 7.287589895026367E-4 0.30597503636849427 >1k 5.205421351546223E-5 0.040135081222231084 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 3.1285303509679204E-5 0.0 0.0 0.0 0.0 9 3.1285303509679204E-5 0.0 0.0 0.0 3.1285303509679204E-5 10-11 3.1285303509679204E-5 0.0 0.0 3.1285303509679204E-5 3.1285303509679204E-5 12-13 3.1285303509679204E-5 0.0 0.0 3.1285303509679204E-5 3.1285303509679204E-5 14-15 3.1285303509679204E-5 0.0 0.0 3.1285303509679204E-5 9.385591052903761E-5 16-17 3.1285303509679204E-5 0.0 0.0 4.692795526451881E-5 1.5642651754839602E-4 18-19 3.1285303509679204E-5 0.0 0.0 6.257060701935841E-5 2.5028242807743364E-4 20-21 3.1285303509679204E-5 0.0 0.0 6.257060701935841E-5 2.5028242807743364E-4 22-23 3.1285303509679204E-5 0.0 0.0 1.4078386579355643E-4 2.8156773158711287E-4 24-25 3.1285303509679204E-5 0.0 0.0 3.7542364211615045E-4 3.1285303509679204E-4 26-27 4.692795526451881E-5 0.0 0.0 7.664899359871404E-4 3.441383386064712E-4 28-29 6.257060701935841E-5 0.0 0.0 0.0030659597439485617 4.0670894562582963E-4 30-31 6.257060701935841E-5 1.5642651754839602E-5 0.0 0.010949856228387721 4.0670894562582963E-4 32-33 6.257060701935841E-5 3.1285303509679204E-5 0.0 0.028845049835924227 4.0670894562582963E-4 34-35 6.257060701935841E-5 3.1285303509679204E-5 0.0 0.05187103321904812 4.0670894562582963E-4 36-37 7.821325877419801E-5 3.1285303509679204E-5 0.0 0.08892847522626313 4.2235159738066925E-4 38-39 9.385591052903761E-5 3.1285303509679204E-5 0.0 0.14974710524907953 4.536369008903484E-4 40-41 9.385591052903761E-5 4.692795526451881E-5 0.0 0.21909098047828346 4.6927955264518804E-4 42-43 9.385591052903761E-5 6.257060701935841E-5 0.0 0.2919388097005715 4.8492220440002766E-4 44-45 9.385591052903761E-5 6.257060701935841E-5 0.0 0.3815555616040476 5.162075079097069E-4 46-47 9.385591052903761E-5 6.257060701935841E-5 0.0 0.4848439911412534 5.787781149290652E-4 48-49 9.385591052903761E-5 6.257060701935841E-5 0.0 0.5909950259495951 6.413487219484237E-4 50-51 9.385591052903761E-5 6.257060701935841E-5 0.0 0.7079082051652662 6.569913737032633E-4 52-53 9.385591052903761E-5 6.257060701935841E-5 0.0 0.8312035862969119 6.882766772129424E-4 54-55 9.385591052903761E-5 6.257060701935841E-5 0.0 0.96695051822541 6.882766772129424E-4 56-57 9.385591052903761E-5 6.257060701935841E-5 0.0 1.1262396410449416 6.882766772129424E-4 58-59 9.385591052903761E-5 6.257060701935841E-5 0.0 1.2993412253639967 6.882766772129424E-4 60-61 9.385591052903761E-5 6.257060701935841E-5 0.0 1.4853479973807944 6.882766772129424E-4 62-63 9.385591052903761E-5 6.257060701935841E-5 0.0 1.6786911730706118 7.195619807226217E-4 64-65 9.385591052903761E-5 6.257060701935841E-5 0.0 1.886707156106469 7.195619807226217E-4 66-67 9.385591052903761E-5 7.821325877419801E-5 0.0 2.128229699201192 7.195619807226217E-4 68-69 9.385591052903761E-5 9.385591052903761E-5 0.0 2.392465372643943 7.195619807226217E-4 70-71 9.385591052903761E-5 9.385591052903761E-5 0.0 2.6740331042310554 7.508472842323009E-4 72-73 9.385591052903761E-5 9.385591052903761E-5 0.0 2.96669147591235 8.603458465161781E-4 74-75 9.385591052903761E-5 9.385591052903761E-5 0.0 3.272677386888767 8.759884982710177E-4 76-77 9.385591052903761E-5 9.385591052903761E-5 0.0 3.615016820543432 8.759884982710177E-4 78-79 9.385591052903761E-5 9.385591052903761E-5 0.0 3.9949924743202407 8.759884982710177E-4 80-81 9.385591052903761E-5 1.0949856228387722E-4 0.0 4.401670134642561 9.072738017806968E-4 82-83 9.385591052903761E-5 1.2514121403871682E-4 0.0 4.818859656944133 9.385591052903761E-4 84-85 9.385591052903761E-5 1.2514121403871682E-4 0.0 5.264018240583358 9.385591052903761E-4 86-87 9.385591052903761E-5 1.2514121403871682E-4 0.0 5.741478900096327 9.385591052903761E-4 88-89 9.385591052903761E-5 1.2514121403871682E-4 0.0 6.2571858431498795 9.385591052903761E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2205 0.0 45.621647 1 GTATCAA 4015 0.0 44.200764 1 TCAACGC 4815 0.0 35.283466 4 CAACGCA 4910 0.0 34.597 5 TATCAAC 5195 0.0 33.159317 2 AACGCAG 5180 0.0 32.691334 6 ATCAACG 5235 0.0 32.632977 3 GTACATG 8860 0.0 29.509481 1 TACATGG 9145 0.0 28.229273 2 ACGCAGA 6325 0.0 26.328268 7 ACATGGG 9650 0.0 26.30858 3 CGCAGAG 6525 0.0 24.940762 8 CATGGGG 8370 0.0 22.338562 4 GCAGAGT 7805 0.0 19.634766 9 GAGTACA 6490 0.0 19.1558 1 GTATAGG 910 0.0 18.250317 1 GTGTAGC 1810 0.0 18.088985 1 AGAGTAC 6510 0.0 17.96534 10-11 AGTACAT 6560 0.0 17.578709 2 TCTATAC 820 0.0 16.782438 3 >>END_MODULE