##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921411_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2933059 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.348104487499228 31.0 31.0 34.0 26.0 34.0 2 30.417034911333186 33.0 31.0 34.0 26.0 34.0 3 30.465932325261782 33.0 31.0 34.0 26.0 34.0 4 33.909830658026316 37.0 35.0 37.0 30.0 37.0 5 33.892719171349775 37.0 35.0 37.0 30.0 37.0 6 33.93110298838175 37.0 35.0 37.0 30.0 37.0 7 33.84558237662454 37.0 35.0 37.0 29.0 37.0 8 33.81124348333941 37.0 35.0 37.0 29.0 37.0 9 35.37052715270985 39.0 37.0 39.0 30.0 39.0 10-11 35.264697368856204 39.0 37.0 39.0 29.0 39.0 12-13 35.15332405519289 39.0 35.0 39.0 28.0 39.0 14-15 36.29791678244454 40.0 37.0 41.0 27.5 41.0 16-17 36.24494341914023 40.0 37.0 41.0 27.0 41.0 18-19 36.187931269026635 40.0 37.0 41.0 27.0 41.0 20-21 36.122138865941665 40.0 37.0 41.0 27.0 41.0 22-23 36.00119210012482 40.0 36.5 41.0 27.0 41.0 24-25 35.90468125598564 40.0 36.0 41.0 27.0 41.0 26-27 35.76248295721293 40.0 36.0 41.0 27.0 41.0 28-29 35.62584591718067 40.0 36.0 41.0 26.0 41.0 30-31 35.48626434040365 40.0 36.0 41.0 25.0 41.0 32-33 35.3221033057978 39.5 35.0 41.0 25.0 41.0 34-35 35.158297872630584 39.0 35.0 41.0 24.0 41.0 36-37 34.99626004795675 39.0 35.0 41.0 24.0 41.0 38-39 35.23634744476671 39.5 35.0 41.0 24.5 41.0 40-41 35.365157843739254 40.0 35.0 41.0 24.5 41.0 42-43 35.215382472701705 40.0 35.0 41.0 24.0 41.0 44-45 35.10293076272929 40.0 35.0 41.0 23.0 41.0 46-47 34.96040328544363 40.0 35.0 41.0 23.0 41.0 48-49 34.82136397528996 39.5 35.0 41.0 22.0 41.0 50-51 33.11852710770564 37.0 32.5 39.5 18.0 40.0 52-53 33.27891528946401 37.5 33.5 39.5 18.0 40.0 54-55 34.13265553130708 39.0 34.0 40.5 18.5 41.0 56-57 34.138747464677664 39.0 34.0 41.0 18.0 41.0 58-59 33.962466148822784 38.0 34.0 41.0 18.0 41.0 60-61 33.712177116109835 38.0 34.0 40.0 16.0 41.0 62-63 33.42358864925663 37.0 34.0 40.0 13.5 41.0 64-65 33.12815545135642 37.0 33.5 40.0 12.0 41.0 66-67 32.782966691089406 36.0 33.0 39.5 8.0 41.0 68-69 32.41621699393023 36.0 33.0 39.0 7.0 41.0 70-71 32.034825927470266 35.0 32.5 39.0 3.5 40.5 72-73 31.680961412641203 35.0 32.0 37.5 2.0 40.0 74-75 31.285762918509313 35.0 32.0 37.0 2.0 39.0 76-77 30.913521855509895 35.0 32.0 36.5 2.0 39.0 78-79 30.579608354281316 35.0 31.5 36.0 2.0 38.5 80-81 30.24016888170337 35.0 31.0 36.0 2.0 37.0 82-83 29.955197116730346 35.0 31.0 35.0 2.0 37.0 84-85 29.732361503808825 35.0 31.0 35.0 2.0 36.0 86-87 29.518152720419195 35.0 31.0 35.0 2.0 36.0 88-89 29.329361768719963 35.0 31.0 35.0 2.0 36.0 90-91 29.094977973508204 35.0 30.5 35.0 2.0 35.5 92-93 28.915954469378214 34.0 30.0 35.0 2.0 35.0 94-95 28.7255812106064 34.0 30.0 35.0 2.0 35.0 96-97 28.489026303255407 34.0 30.0 35.0 2.0 35.0 98-99 28.273954086842437 34.0 30.0 35.0 2.0 35.0 100-101 27.247861362488784 33.5 27.5 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 110444.0 3 18221.0 4 12254.0 5 9152.0 6 8225.0 7 8352.0 8 8698.0 9 9316.0 10 10037.0 11 10623.0 12 10683.0 13 10783.0 14 11251.0 15 11861.0 16 11975.0 17 12126.0 18 11564.0 19 11058.0 20 11090.0 21 11850.0 22 13342.0 23 15097.0 24 17926.0 25 21004.0 26 25084.0 27 30077.0 28 35587.0 29 42169.0 30 50600.0 31 61577.0 32 77434.0 33 100289.0 34 142507.0 35 208597.0 36 351775.0 37 637807.0 38 669451.0 39 113158.0 40 15.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.58847360983052 17.97815052038083 13.59331396509009 24.840061904698555 2 16.18115569498178 19.34362632740427 38.92127220669862 25.553945770915327 3 19.303940279263006 23.376466113734782 28.821395496385133 28.49819811061708 4 13.71929244052076 15.792064431508262 35.81212252493191 34.67652060303907 5 15.19450936731244 36.442945419765564 33.62060849668654 14.741936716235445 6 34.12098443714176 34.28971079524742 17.162450951540958 14.426853816069857 7 29.798102933438997 30.899161265661267 20.672174117934293 18.630561682965443 8 27.180809598474458 34.03504081547749 19.669554566020544 19.114595020027515 9 27.043497772527754 15.688572644512888 19.028382879700132 38.23954670325923 10-11 26.06371043205212 24.909511721360893 27.37733356431403 21.64944428227296 12-13 26.605678389432036 22.255412425409432 27.2115085390693 23.927400646089232 14-15 23.898527777531434 23.85427105511437 24.354448764188586 27.89275240316561 16-17 24.228694184356964 26.76081483902883 25.185829755371973 23.824661221242238 18-19 24.298865269970058 26.304562706328312 26.203773976114555 23.192798047587083 20-21 24.865561580614198 25.377993756075668 26.096715178799645 23.65972948451049 22-23 24.67767229227585 25.215861540258878 25.773357108077015 24.333109059388253 24-25 24.443895677230284 25.46832620239141 25.796517799158476 24.291260321219827 26-27 24.288798061092372 25.644740842649966 25.8380450086992 24.228416087558465 28-29 24.413535299903785 25.795512342770955 25.67326026512503 24.117692092200233 30-31 24.70334662211801 25.47545780326381 25.58733524205814 24.233860332560035 32-33 24.470695020835315 25.492275026843302 25.54463183327929 24.492398119042093 34-35 24.693946685083766 25.596349404140746 25.59815656229419 24.111547348481295 36-37 24.69261657556326 25.580881155872483 25.58062544695787 24.14587682160638 38-39 24.604030529874372 25.58034549834377 25.601076080897005 24.21454789088485 40-41 24.68439819322952 25.415261946260582 25.675510268097028 24.22482959241287 42-43 24.54221621505272 25.377629982578675 25.569507115614513 24.51064668675409 44-45 24.51230394680999 25.4602932247809 25.591679924033794 24.435722904375314 46-47 24.649800619278384 25.47217457440196 25.410841112173284 24.467183694146367 48-49 24.430686377036746 25.57967231022979 25.523617550775928 24.466023761957537 50-51 24.495979294515333 25.529340654855016 25.668314299392303 24.306365751237347 52-53 24.65753775616135 25.428391649526898 25.603273618288974 24.310796976022775 54-55 24.356275331303127 25.271609640455615 25.777663533683693 24.59445149455756 56-57 24.35606678515517 25.441457938146268 25.665481496918076 24.536993779780484 58-59 24.486344160131047 25.377135873450218 25.763115439438856 24.37340452697988 60-61 24.550929400796214 25.330010819578824 25.839849735284158 24.2792100443408 62-63 24.441442315510276 25.358057681415097 25.870581330439997 24.329918672634637 64-65 24.35081905607844 25.19872572297286 25.81838990143997 24.632065319508737 66-67 24.363720582757185 25.39158514033733 25.644213001273986 24.6004812756315 68-69 24.377392108426935 25.317762179524294 25.73435134738611 24.57049436466266 70-71 24.310166758084314 25.142061658072496 25.81591104231829 24.7318605415249 72-73 24.315394733561295 25.33469002554557 25.660200518562466 24.68971472233067 74-75 24.241617431950207 25.452249227429807 25.699710782509644 24.606422558110346 76-77 24.33415647980217 25.13254024366502 25.74853387708818 24.78476939944463 78-79 24.243407763349957 25.122099334733505 25.821444830027783 24.813048071888755 80-81 24.313581050053575 25.32190622881634 25.6611181419606 24.70339457916949 82-83 24.283759707820256 25.34237998570808 25.780157600624705 24.593702705846958 84-85 24.350289840069507 25.333409179971433 25.724395182850184 24.591905797108875 86-87 24.18023767981635 25.43342497995871 25.69572158561647 24.690615754608473 88-89 24.163111092962826 25.24205892448288 25.783010710544662 24.811819272009632 90-91 24.195144186799844 25.152044218868504 25.811373763532863 24.841437830798792 92-93 24.21659586929727 25.15806818348792 25.927948997190086 24.697386950024722 94-95 24.145234555235238 25.084955796670666 25.95663379732718 24.81317585076692 96-97 24.136051380844826 25.010534604252598 25.94952412296216 24.90388989194042 98-99 23.994069125983746 24.937520962321557 25.92956523269437 25.13884467900033 100-101 24.22076061289622 24.843352416351667 25.979430803966203 24.956456166785912 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 23.0 1 18.0 2 26.0 3 41.0 4 47.0 5 62.5 6 100.5 7 192.0 8 297.5 9 334.0 10 317.5 11 312.5 12 332.5 13 380.0 14 455.0 15 516.0 16 593.0 17 703.5 18 791.0 19 859.0 20 925.0 21 1008.0 22 1095.5 23 1233.5 24 1390.0 25 1611.5 26 2027.0 27 2658.0 28 3617.0 29 5216.5 30 7681.5 31 11554.5 32 16997.5 33 22399.0 34 28090.0 35 34811.5 36 43043.5 37 52057.0 38 60803.5 39 68769.5 40 76086.5 41 83049.5 42 90077.5 43 98057.0 44 106033.5 45 114112.5 46 119915.0 47 124477.0 48 129635.5 49 131989.5 50 131099.0 51 129660.5 52 128950.0 53 127736.0 54 126182.0 55 122199.0 56 114033.5 57 103516.0 58 93600.5 59 82796.0 60 69149.0 61 57137.0 62 46923.5 63 36331.5 64 26920.5 65 20080.0 66 15440.5 67 12227.5 68 9730.5 69 7693.0 70 5911.5 71 4470.0 72 3427.5 73 2650.0 74 2114.0 75 1681.5 76 1279.0 77 892.5 78 596.5 79 421.5 80 298.5 81 236.5 82 182.0 83 129.5 84 98.0 85 75.5 86 58.5 87 54.0 88 46.0 89 41.5 90 35.0 91 23.0 92 18.5 93 17.5 94 19.0 95 16.5 96 12.0 97 11.0 98 9.5 99 7.5 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0496410061986479 2 0.05727808407536295 3 0.04820905409676382 4 0.053664109722988865 5 0.04687938428787147 6 0.017047048831953262 7 0.014524085604824178 8 0.02021779991469657 9 0.02001323532871313 10-11 0.02164975201658064 12-13 0.02732641927762108 14-15 0.04435642106074238 16-17 0.029747100211758443 18-19 0.023439692143935736 20-21 0.026201314054712165 22-23 0.04693052543436733 24-25 0.042106210614924554 26-27 0.03042898216503657 28-29 0.02023484696352852 30-31 0.013143274649435963 32-33 0.010160041103844143 34-35 0.009461112101734061 36-37 0.001244434564732588 38-39 0.006614254946797865 40-41 0.0031025628874154936 42-43 0.21090608814892572 44-45 0.18552303243814733 46-47 0.1915917818223227 48-49 0.18971660645080785 50-51 0.18838693664191547 52-53 0.19283621638705528 54-55 0.19106332330853215 56-57 0.20154725834018342 58-59 0.19881973052707091 60-61 0.20313263388155506 62-63 0.20037101197077864 64-65 0.20146202309602365 66-67 0.19196681689662567 68-69 0.19073942938072505 70-71 0.1740503685742428 72-73 0.1824034225018999 74-75 0.18177268169511762 76-77 0.17964180059112347 78-79 0.20580902054817174 80-81 0.21394046284101345 82-83 0.2124232754949696 84-85 0.20797399574982978 86-87 0.22505513867944696 88-89 0.22333338674741968 90-91 0.222481034305822 92-93 0.22611205570702808 94-95 0.23792566054757167 96-97 0.23824955447537877 98-99 0.2276633371507358 100-101 0.23813022513355508 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2933059.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 62.34804334383281 #Duplication Level Percentage of deduplicated Percentage of total 1 79.64648078902127 49.65802236417645 2 11.358424743660674 14.163511164708375 3 3.6986276691862265 6.918065946933664 4 1.710420092281117 4.265653841988224 5 0.9415398164028042 2.935158264151321 6 0.5863884830307906 2.1936104733796857 7 0.40284208550711587 1.7581491065542365 8 0.298373300078347 1.4882393156741769 9 0.2148635319796726 1.205668872438987 >10 1.0810261745723013 11.649282863183402 >50 0.04649518942131577 1.9641446261489361 >100 0.013531608659645377 1.4072561395367738 >500 9.865161987377088E-4 0.3932370211257562 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10-11 0.0 0.0 0.0 0.0 0.0 12-13 0.0 0.0 0.0 0.0 6.818819532781304E-5 14-15 0.0 0.0 0.0 0.0 1.8751753715148586E-4 16-17 0.0 0.0 0.0 0.0 2.3865868364734565E-4 18-19 0.0 6.818819532781304E-5 0.0 0.0 2.8979983014320546E-4 20-21 0.0 6.818819532781304E-5 0.0 0.0 3.750350743029717E-4 22-23 0.0 6.818819532781304E-5 0.0 1.704704883195326E-5 3.92082123134925E-4 24-25 0.0 6.818819532781304E-5 0.0 2.0456458598343914E-4 4.091291719668783E-4 26-27 0.0 1.0228229299171957E-4 0.0 3.5798802547101847E-4 4.432232696307848E-4 28-29 0.0 1.0228229299171957E-4 0.0 0.0017047048831953261 4.432232696307848E-4 30-31 0.0 1.0228229299171957E-4 0.0 0.0059494200423516885 4.432232696307848E-4 32-33 0.0 1.0228229299171957E-4 0.0 0.01755846029691186 4.432232696307848E-4 34-35 0.0 1.0228229299171957E-4 0.0 0.03337812161296448 4.432232696307848E-4 36-37 0.0 1.0228229299171957E-4 0.0 0.05659620212208483 4.432232696307848E-4 38-39 0.0 1.0228229299171957E-4 0.0 0.09657153163301523 5.625526114544576E-4 40-41 0.0 1.3637639065562608E-4 0.0 0.14520676195057788 6.136937579503174E-4 42-43 0.0 1.3637639065562608E-4 0.0 0.19801851923196906 6.136937579503174E-4 44-45 0.0 1.3637639065562608E-4 0.0 0.261893811205298 6.477878556142239E-4 46-47 0.0 1.3637639065562608E-4 0.0 0.3386396250467515 7.159760509420369E-4 48-49 0.0 1.3637639065562608E-4 0.0 0.41504449791156606 7.500701486059434E-4 50-51 0.0 1.3637639065562608E-4 0.0 0.4979272493325228 7.500701486059434E-4 52-53 0.0 1.3637639065562608E-4 0.0 0.5899983600739024 8.012112951018033E-4 54-55 0.0 1.3637639065562608E-4 0.0 0.6968492621525855 8.523524415976631E-4 56-57 0.0 1.3637639065562608E-4 0.0 0.8218552712372986 8.864465392615696E-4 58-59 0.0 1.3637639065562608E-4 0.0 0.9526061357783802 9.034935880935229E-4 60-61 0.0 1.3637639065562608E-4 0.0 1.0859992928884146 9.205406369254761E-4 62-63 0.0 1.3637639065562608E-4 0.0 1.2302002789579072 9.546347345893826E-4 64-65 0.0 1.3637639065562608E-4 0.0 1.3906300555154192 9.716817834213359E-4 66-67 0.0 1.3637639065562608E-4 0.0 1.5878132693546227 9.887288322532892E-4 68-69 0.0 1.3637639065562608E-4 0.0 1.7983443224292455 9.887288322532892E-4 70-71 0.0 1.3637639065562608E-4 0.0 2.014074725397614 0.0010228229299171958 72-73 0.0 1.3637639065562608E-4 0.0 2.2418914859878374 0.0012955757112284479 74-75 0.0 1.3637639065562608E-4 0.0 2.495108349337671 0.0013467168577243076 76-77 0.0 1.3637639065562608E-4 0.0 2.790670081986077 0.0013637639065562609 78-79 0.0 1.3637639065562608E-4 0.0 3.116013008943905 0.0013978580042201675 80-81 0.0 1.3637639065562608E-4 0.0 3.4479360967508668 0.0014489991507160272 82-83 0.0 1.3637639065562608E-4 0.0 3.7905817782731273 0.001500140297211887 84-85 0.0 1.3637639065562608E-4 0.0 4.16169603134475 0.001500140297211887 86-87 0.0 1.3637639065562608E-4 0.0 4.577950869723384 0.0015171873460438402 88-89 0.0 1.3637639065562608E-4 0.0 5.026117783515436 0.0015342343948757935 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2195 0.0 47.988903 1 GTATCAA 3985 0.0 46.67454 1 TCAACGC 4880 0.0 36.951374 4 CAACGCA 4940 0.0 36.309834 5 ATCAACG 5260 0.0 34.281296 3 AACGCAG 5285 0.0 34.11099 6 TATCAAC 5325 0.0 33.95253 2 ACGCAGA 6175 0.0 28.354317 7 GTACATG 8635 0.0 26.485434 1 CGCAGAG 6500 0.0 26.136288 8 TACATGG 8900 0.0 25.272903 2 ACATGGG 9235 0.0 23.739115 3 CATGGGG 8315 0.0 21.572296 4 GCAGAGT 7670 0.0 21.035742 9 ATGGGGG 4905 0.0 18.671434 5 AGAGTAC 6415 0.0 18.456762 10-11 GAGTACA 6560 0.0 17.720854 1 CAGAGTA 7210 0.0 17.079836 10-11 GTATAGG 735 0.0 16.7845 1 GTATATA 775 0.0 16.53044 1 >>END_MODULE