##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921411_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2933059 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.234224064364202 33.0 31.0 34.0 28.0 34.0 2 31.37399145397348 34.0 31.0 34.0 28.0 34.0 3 31.4472978552426 34.0 31.0 34.0 28.0 34.0 4 34.926850772521114 37.0 35.0 37.0 32.0 37.0 5 34.64637567808899 37.0 35.0 37.0 32.0 37.0 6 34.5956975294394 37.0 35.0 37.0 32.0 37.0 7 34.455618178836495 37.0 35.0 37.0 31.0 37.0 8 34.41333331514981 37.0 35.0 37.0 31.0 37.0 9 36.021760557833986 39.0 37.0 39.0 31.0 39.0 10-11 35.861991524889206 39.0 37.0 39.0 30.0 39.0 12-13 35.79145867846504 39.0 37.0 39.0 30.0 39.0 14-15 37.017494363393304 40.0 38.0 41.0 31.0 41.0 16-17 36.99099063469231 40.0 38.0 41.0 31.0 41.0 18-19 36.94363222833226 40.0 38.0 41.0 30.5 41.0 20-21 36.901088079032846 40.0 37.5 41.0 30.0 41.0 22-23 36.78459962789702 40.0 37.0 41.0 30.0 41.0 24-25 36.71379368775057 40.0 37.0 41.0 30.0 41.0 26-27 36.57752861432381 40.0 37.0 41.0 30.0 41.0 28-29 36.42066525085244 40.0 37.0 41.0 29.0 41.0 30-31 36.28332229252804 40.0 36.5 41.0 29.0 41.0 32-33 36.24926211849131 40.0 36.5 41.0 29.0 41.0 34-35 36.3901997880029 40.0 37.0 41.0 30.0 41.0 36-37 36.369300617546386 40.0 37.0 41.0 29.5 41.0 38-39 36.28376636815011 40.0 37.0 41.0 29.0 41.0 40-41 36.164434298798625 40.0 36.5 41.0 28.0 41.0 42-43 36.06886513363693 40.0 36.0 41.0 28.0 41.0 44-45 35.938221495033005 40.0 36.0 41.0 28.0 41.0 46-47 35.79096823487015 40.0 36.0 41.0 27.0 41.0 48-49 35.637681171773224 40.0 35.0 41.0 27.0 41.0 50-51 35.48310790884193 39.5 35.0 41.0 26.0 41.0 52-53 35.3087464316265 39.0 35.0 41.0 26.0 41.0 54-55 35.09739115374086 39.0 35.0 41.0 26.0 41.0 56-57 34.82331347579438 39.0 35.0 41.0 25.0 41.0 58-59 34.594570889982094 38.0 34.5 40.0 24.5 41.0 60-61 34.315749870698134 38.0 34.0 40.0 23.5 41.0 62-63 34.015285918217124 37.0 34.0 40.0 23.0 41.0 64-65 33.69853163540181 37.0 34.0 40.0 23.0 41.0 66-67 33.357850455786945 36.0 34.0 39.0 22.0 41.0 68-69 32.99644569031854 36.0 33.0 39.0 22.0 40.5 70-71 32.621497726435095 35.0 33.0 38.5 20.5 40.0 72-73 32.225581722017864 35.0 33.0 37.0 20.0 39.5 74-75 31.823818750321763 35.0 32.5 37.0 18.0 39.0 76-77 29.112541888860743 33.0 28.5 34.5 11.0 36.5 78-79 30.75234149739231 34.5 31.5 36.0 12.5 37.0 80-81 30.95489981619872 35.0 32.0 35.5 14.0 37.0 82-83 30.801828909680985 35.0 32.0 35.0 12.0 37.0 84-85 30.582020511691034 35.0 32.0 35.0 7.5 36.0 86-87 30.34620050261519 35.0 32.0 35.0 6.0 36.0 88-89 30.079917928688104 35.0 31.0 35.0 2.0 36.0 90-91 29.90215982699291 34.0 31.0 35.0 2.0 35.0 92-93 29.763991961975535 34.0 31.0 35.0 2.0 35.0 94-95 29.67196807155942 34.0 31.0 35.0 2.0 35.0 96-97 29.48388985697185 34.0 31.0 35.0 2.0 35.0 98-99 29.219261187722445 34.0 31.0 35.0 2.0 35.0 100-101 28.1406354253358 33.0 28.5 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 66509.0 3 21534.0 4 11549.0 5 8011.0 6 7137.0 7 6864.0 8 7012.0 9 7510.0 10 8282.0 11 8989.0 12 9305.0 13 9726.0 14 10462.0 15 11297.0 16 11749.0 17 12449.0 18 11956.0 19 10883.0 20 10151.0 21 10200.0 22 10891.0 23 12524.0 24 14799.0 25 17755.0 26 21246.0 27 25608.0 28 31007.0 29 37534.0 30 45788.0 31 56724.0 32 72536.0 33 95781.0 34 138996.0 35 209345.0 36 370600.0 37 712956.0 38 716206.0 39 81188.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.97568949475463 19.79394115287108 14.2159776698449 26.014391682529386 2 15.100240500830878 20.86878282849979 37.080973158961704 26.950003511707628 3 17.69544715280832 24.67075137492371 28.59036649857308 29.043434973694886 4 13.324702574668734 17.194053300446893 34.72637005906398 34.75487406582039 5 14.844650002966972 36.822618015593314 33.739797195494845 14.592934785944871 6 34.08403826634722 34.97816756170515 16.800902550646583 14.13689162130104 7 29.492627993678944 31.18945945439141 20.736638078726788 18.581274473202853 8 27.111403265323382 34.57270059822666 19.394190661990685 18.921705474459273 9 26.783777619202343 15.599924856608748 18.933713914380856 38.68258360980805 10-11 25.906297742260858 25.299087426920693 27.27253801591504 21.52207681490341 12-13 26.454429084814286 22.476811250543165 27.224480868802246 23.844278795840303 14-15 23.730677853758593 24.0726767736005 24.277576081590123 27.91906929105078 16-17 24.159476204308685 27.030189031766227 25.059221588979668 23.751113174945417 18-19 24.196356760490534 26.496727466878323 26.211955545236375 23.094960227394772 20-21 24.720349589861975 25.57524845407678 26.04259680324524 23.661805152816008 22-23 24.53988587645725 25.328996322769186 25.793325342787433 24.337792457986136 24-25 24.343775789415005 25.68047403853481 25.689509123816638 24.28624104823355 26-27 24.187206453217566 25.821922467082615 25.77974702577049 24.211124053929332 28-29 24.320672349019215 25.96925583253193 25.648888303192614 24.061183515256243 30-31 24.616555526306097 25.659851846193927 25.55104159136447 24.172551036135506 32-33 24.34606242808311 25.656912708470546 25.479359286867442 24.517665576578906 34-35 24.568580813769817 25.74437806912902 25.62656988778558 24.060471229315585 36-37 24.529319248738254 25.757891388419996 25.627514669937906 24.085274692903845 38-39 24.55988691646554 25.759490196733577 25.56394309956213 24.116679787238755 40-41 24.591324585852227 25.60072801155026 25.642461157743625 24.16548624485389 42-43 24.448362186188547 25.5944977039101 25.507908451001978 24.449231658899375 44-45 24.45581728547193 25.59032438283281 25.517714973887717 24.43614335780754 46-47 24.54776308846633 25.613372283829435 25.375918602896736 24.4629460248075 48-49 24.30526122328036 25.719630336469102 25.546463506075074 24.428644934175463 50-51 24.448879961785146 25.668921893108198 25.548238921937433 24.33395922316922 52-53 24.666605523605085 25.5614535501389 25.444969198898608 24.326971727357403 54-55 24.253599481627592 25.48434185644078 25.666252930207072 24.595805731724553 56-57 24.295103889386503 25.59965821979018 25.53054524240516 24.574692648418157 58-59 24.40016202990188 25.574520797929072 25.606896090824034 24.418421081345013 60-61 24.423221571431398 25.556201118232757 25.684182782434238 24.336394527901607 62-63 24.376701074484878 25.58748503634159 25.64944536638521 24.386368522788324 64-65 24.22346796660944 25.41029216482184 25.623881639541796 24.74235822902692 66-67 24.2478488528352 25.64198458077358 25.46894121402874 24.641225352362476 68-69 24.238638750883283 25.57247886263372 25.50773331587233 24.681149070610672 70-71 24.18155557522495 25.349150256506547 25.62067319474595 24.848620973522547 72-73 24.193268409665706 25.57431731931368 25.4169645025141 24.81544976850652 74-75 24.10943291601829 25.65443981670467 25.44288356272531 24.793243704551724 76-77 24.171806900586752 25.35597736098471 25.534508572676458 24.937707165752084 78-79 24.02970786154982 25.38726392628509 25.598159174310048 24.98486903785504 80-81 24.16959117691958 25.545451366709283 25.420596455109802 24.864361001261344 82-83 24.1402128693854 25.574590986973206 25.48741148842668 24.797784655214716 84-85 24.134084195003034 25.545701405614686 25.46195591006849 24.858258489313794 86-87 23.994429906529298 25.683167323574178 25.40727299156399 24.915129778332528 88-89 23.952936808895906 25.500999726182023 25.47207962531035 25.073983839611717 90-91 23.94450113492111 25.410039738057506 25.50801251055358 25.137446616467805 92-93 23.971490259706478 25.425630965361613 25.56697211842366 25.03590665650825 94-95 23.856727548343727 25.317349087320373 25.610741751549092 25.215181612786807 96-97 23.775796604887283 25.314714786288544 25.614090002487405 25.295398606336768 98-99 23.60768389551034 25.32032284157868 25.536260864451034 25.53573239845995 100-101 23.6627658997761 25.31226421430795 25.53316333749629 25.49180654841966 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 21.0 1 15.5 2 18.5 3 28.5 4 27.0 5 30.0 6 46.0 7 124.5 8 216.0 9 236.5 10 210.5 11 186.5 12 181.0 13 197.5 14 251.5 15 282.0 16 317.0 17 367.0 18 412.0 19 469.0 20 518.0 21 587.0 22 730.5 23 918.0 24 1138.0 25 1495.5 26 1931.5 27 2641.0 28 3846.0 29 5680.5 30 8520.0 31 12538.0 32 17954.0 33 23317.5 34 28744.5 35 35241.0 36 43537.0 37 52259.0 38 60510.0 39 68758.5 40 76303.5 41 83453.0 42 90881.5 43 98918.0 44 106477.5 45 114184.5 46 120181.0 47 125294.0 48 130845.0 49 132745.5 50 131577.0 51 130516.0 52 129878.5 53 128914.5 54 127289.5 55 122405.0 56 114228.5 57 103593.0 58 92862.0 59 82162.0 60 68475.5 61 56183.0 62 46179.0 63 35422.0 64 25832.0 65 19307.5 66 15040.5 67 11853.5 68 9134.5 69 7116.0 70 5526.0 71 4166.0 72 3054.0 73 2355.5 74 1897.5 75 1446.0 76 1021.5 77 666.0 78 444.5 79 274.0 80 157.5 81 105.5 82 71.5 83 37.5 84 23.0 85 16.5 86 13.0 87 8.0 88 8.0 89 7.5 90 3.5 91 3.0 92 1.5 93 1.5 94 1.5 95 1.5 96 1.0 97 0.5 98 0.5 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.14605911439217553 2 4.432232696307848E-4 3 0.005761902505200202 4 0.0047049854776191 5 0.02649111388485537 6 0.0012955757112284479 7 1.3637639065562608E-4 8 0.0019433635668426718 9 0.0 10-11 0.10015141188772542 12-13 3.2389392780711197E-4 14-15 0.005284585137905511 16-17 2.3865868364734565E-4 18-19 3.409409766390652E-4 20-21 7.500701486059436E-4 22-23 3.2389392780711197E-4 24-25 0.0016535637366994662 26-27 0.002471822080633223 28-29 0.0060517023353434075 30-31 0.014694556093143712 32-33 0.014336568067672693 34-35 0.011097628789601573 36-37 6.818819532781304E-4 38-39 2.0456458598343914E-4 40-41 0.004722032526451054 42-43 0.008421242122984911 44-45 0.008301912781161238 46-47 0.009427018004070153 48-49 0.011523805010400404 50-51 0.005727808407536296 52-53 0.0016024225902036065 54-55 0.001108058174076962 56-57 0.006136937579503175 58-59 0.009103124076263042 60-61 0.007398419193067715 62-63 0.018325577494349755 64-65 0.03520215583798348 66-67 0.0386968008485339 68-69 0.027650313205428188 70-71 0.04304379830068199 72-73 0.027104807642805682 74-75 0.025297820466618638 76-77 0.2372949197407894 78-79 0.06760859566752664 80-81 0.05647687278026116 82-83 0.020575787940167588 84-85 0.03276442785501417 86-87 0.0820985871746869 88-89 0.2645020096765868 90-91 0.3166489320535318 92-93 0.05112409944702783 94-95 0.004415185647475894 96-97 0.009699770785381406 98-99 0.0014149050530521208 100-101 0.0015683284925397 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2933059.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 61.81353820540867 #Duplication Level Percentage of deduplicated Percentage of total 1 79.09883990708676 48.893791626002105 2 11.729331559785571 14.500629689894224 3 3.7137614666458063 6.886822089128552 4 1.7988114235136399 4.447635946067438 5 0.9617394897857026 2.972426034775938 6 0.6037101137504264 2.2390474908782156 7 0.3871141329070126 1.675022597101089 8 0.30568927218246406 1.5116588404027451 9 0.20684855825623505 1.150743713265494 >10 1.1327414605028583 11.987882572806496 >50 0.0466549066410671 1.939402543434416 >100 0.014094294043958257 1.5044975391838735 >500 6.634148985621754E-4 0.2904393170594255 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.409409766390652E-5 2 0.0 0.0 0.0 0.0 3.409409766390652E-5 3 0.0 0.0 0.0 0.0 3.409409766390652E-5 4 0.0 0.0 0.0 0.0 3.409409766390652E-5 5 0.0 0.0 0.0 0.0 3.409409766390652E-5 6 0.0 0.0 0.0 0.0 3.409409766390652E-5 7 0.0 0.0 0.0 0.0 6.818819532781304E-5 8 0.0 0.0 0.0 0.0 6.818819532781304E-5 9 0.0 0.0 0.0 0.0 6.818819532781304E-5 10-11 0.0 0.0 0.0 0.0 6.818819532781304E-5 12-13 0.0 0.0 0.0 3.409409766390652E-5 1.704704883195326E-4 14-15 0.0 0.0 0.0 3.409409766390652E-5 2.3865868364734565E-4 16-17 0.0 0.0 0.0 3.409409766390652E-5 3.750350743029717E-4 18-19 0.0 0.0 0.0 3.409409766390652E-5 4.091291719668783E-4 20-21 0.0 0.0 0.0 3.409409766390652E-5 4.943644161266446E-4 22-23 0.0 0.0 0.0 5.114114649585978E-5 5.455055626225043E-4 24-25 0.0 0.0 0.0 2.3865868364734565E-4 5.795996602864109E-4 26-27 0.0 0.0 0.0 4.091291719668783E-4 6.818819532781304E-4 28-29 0.0 0.0 0.0 0.0017217519320272792 6.818819532781304E-4 30-31 0.0 0.0 0.0 0.0059494200423516885 6.818819532781304E-4 32-33 0.0 0.0 0.0 0.01735389571092842 7.500701486059434E-4 34-35 0.0 0.0 0.0 0.03315650997814909 8.523524415976631E-4 36-37 0.0 0.0 0.0 0.05659620212208483 8.523524415976631E-4 38-39 1.704704883195326E-5 0.0 0.0 0.09662267277951109 8.523524415976631E-4 40-41 3.409409766390652E-5 3.409409766390652E-5 0.0 0.14510447965758616 8.693994904296163E-4 42-43 3.409409766390652E-5 3.409409766390652E-5 0.0 0.19725140203453118 9.034935880935229E-4 44-45 3.409409766390652E-5 3.409409766390652E-5 0.0 0.26063232959173344 9.205406369254761E-4 46-47 3.409409766390652E-5 3.409409766390652E-5 0.0 0.3367985437729006 9.205406369254761E-4 48-49 3.409409766390652E-5 3.409409766390652E-5 0.0 0.41284542861224405 9.546347345893826E-4 50-51 3.409409766390652E-5 3.409409766390652E-5 0.0 0.4955577095448813 9.887288322532892E-4 52-53 3.409409766390652E-5 3.409409766390652E-5 0.0 0.586520762112184 0.001039869978749149 54-55 3.409409766390652E-5 3.409409766390652E-5 0.0 0.6918374297959912 0.0010910111252450086 56-57 3.409409766390652E-5 5.114114649585978E-5 0.0 0.8154285338276523 0.0011421522717408685 58-59 3.409409766390652E-5 1.0228229299171957E-4 0.0 0.9451395283899846 0.0011762463694047751 60-61 3.409409766390652E-5 1.0228229299171957E-4 0.0 1.0768279806168235 0.0011932934182367282 62-63 3.409409766390652E-5 1.0228229299171957E-4 0.0 1.21966520277976 0.0012273875159006349 64-65 3.409409766390652E-5 1.0228229299171957E-4 0.0 1.379072156407355 0.0012614816135645412 66-67 3.409409766390652E-5 1.0228229299171957E-4 0.0 1.5748745592911702 0.0012955757112284479 68-69 3.409409766390652E-5 1.0228229299171957E-4 0.0 1.7827292256991762 0.0013126227600604012 70-71 3.409409766390652E-5 1.0228229299171957E-4 0.0 1.997641370323611 0.0013978580042201675 72-73 3.409409766390652E-5 1.0228229299171957E-4 0.0 2.2239750376654546 0.0015853755413716532 74-75 3.409409766390652E-5 1.0228229299171957E-4 0.0 2.4775328419919274 0.0016194696390355598 76-77 3.409409766390652E-5 1.0228229299171957E-4 0.0 2.772617257273038 0.001704704883195326 78-79 3.409409766390652E-5 1.0228229299171957E-4 0.0 3.097397631619412 0.0017387989808592325 80-81 6.818819532781304E-5 1.0228229299171957E-4 0.0 3.429150248938054 0.0017899401273550925 82-83 6.818819532781304E-5 1.0228229299171957E-4 0.0 3.7724266712670973 0.0019774576645065784 84-85 6.818819532781304E-5 1.0228229299171957E-4 0.0 4.142296489773987 0.0019774576645065784 86-87 6.818819532781304E-5 1.0228229299171957E-4 0.0 4.558636563396782 0.0019774576645065784 88-89 6.818819532781304E-5 1.0228229299171957E-4 0.0 5.007860394216413 0.0019774576645065784 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2295 0.0 47.210835 1 GTATCAA 4040 0.0 41.28718 1 TCAACGC 5035 0.0 32.04508 4 CAACGCA 5120 0.0 31.47298 5 TATCAAC 5300 0.0 30.621897 2 ATCAACG 5365 0.0 30.162443 3 AACGCAG 5520 0.0 29.019112 6 GTACATG 8305 0.0 23.517529 1 ACGCAGA 6690 0.0 23.446669 7 CGCAGAG 6985 0.0 22.04814 8 TACATGG 8575 0.0 21.583025 2 ACATGGG 8920 0.0 20.26945 3 GGACCGT 470 0.0 19.215384 6 CATGGGG 7920 0.0 18.394798 4 GCAGAGT 8120 0.0 17.795528 9 AGAGTAC 6710 0.0 17.780523 10-11 TATACCG 265 7.89056E-6 16.143763 5 CTATACT 1035 0.0 16.047579 4 TAAGTAC 1785 0.0 15.685402 3 CAGAGTA 7455 0.0 15.684864 10-11 >>END_MODULE