##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921410_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2515499 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.602687975626306 31.0 31.0 34.0 27.0 34.0 2 30.65572039583399 33.0 31.0 34.0 27.0 34.0 3 30.705072432944714 33.0 31.0 34.0 27.0 34.0 4 34.17776035689142 37.0 35.0 37.0 30.0 37.0 5 34.17385337859407 37.0 35.0 37.0 30.0 37.0 6 34.224981206512105 37.0 35.0 37.0 30.0 37.0 7 34.151730928932984 37.0 35.0 37.0 30.0 37.0 8 34.11847629436545 37.0 35.0 37.0 30.0 37.0 9 35.695932298124546 39.0 37.0 39.0 30.0 39.0 10-11 35.58697717629782 39.0 37.0 39.0 30.0 39.0 12-13 35.47390696637129 39.0 37.0 39.0 30.0 39.0 14-15 36.61719185736111 40.0 37.0 41.0 30.0 41.0 16-17 36.56384200510515 40.0 37.0 41.0 30.0 41.0 18-19 36.521508257407376 40.0 37.0 41.0 29.5 41.0 20-21 36.46597613435744 40.0 37.0 41.0 29.0 41.0 22-23 36.35551256430632 40.0 37.0 41.0 28.5 41.0 24-25 36.25515017099987 40.0 36.0 41.0 28.0 41.0 26-27 36.10635186100252 40.0 36.0 41.0 27.0 41.0 28-29 35.96373622092476 40.0 36.0 41.0 27.0 41.0 30-31 35.81305876090589 40.0 36.0 41.0 27.0 41.0 32-33 35.62591935039529 40.0 35.5 41.0 26.5 41.0 34-35 35.464269117181125 39.0 35.0 41.0 25.5 41.0 36-37 35.292502402107885 39.0 35.0 41.0 25.0 41.0 38-39 35.5247127905835 39.5 35.0 41.0 26.0 41.0 40-41 35.64229761172634 40.0 35.0 41.0 26.0 41.0 42-43 35.47884515159815 40.0 35.0 41.0 25.0 41.0 44-45 35.353183404167524 40.0 35.0 41.0 24.5 41.0 46-47 35.186677275562424 40.0 35.0 41.0 24.0 41.0 48-49 35.041648396600436 40.0 35.0 41.0 23.0 41.0 50-51 33.3186196853984 37.0 32.5 39.5 20.0 40.0 52-53 33.480214462418786 37.5 33.5 39.5 21.0 40.0 54-55 34.35351117213722 39.0 34.0 40.5 21.5 41.0 56-57 34.37605779211202 39.0 34.0 41.0 22.0 41.0 58-59 34.19978441653127 38.5 34.0 41.0 20.5 41.0 60-61 33.95018006367722 38.0 34.0 40.5 20.0 41.0 62-63 33.65803981635453 37.5 34.0 40.0 18.5 41.0 64-65 33.371765601974005 37.0 34.0 40.0 18.0 41.0 66-67 33.03195648259053 36.5 33.0 39.5 14.0 41.0 68-69 32.66195534166383 36.0 33.0 39.0 12.0 41.0 70-71 32.27316170668325 35.5 33.0 39.0 8.0 40.5 72-73 31.905976110505314 35.0 32.5 37.5 6.5 40.0 74-75 31.49984893653307 35.0 32.0 37.0 2.0 39.0 76-77 31.122221078203566 35.0 32.0 37.0 2.0 39.0 78-79 30.770585279501205 35.0 32.0 36.0 2.0 38.5 80-81 30.416648148140787 35.0 31.5 36.0 2.0 37.0 82-83 30.106856134707268 35.0 31.0 35.0 2.0 37.0 84-85 29.863203086147124 35.0 31.0 35.0 2.0 36.5 86-87 29.636043385427705 35.0 31.0 35.0 2.0 36.0 88-89 29.431350002524347 35.0 31.0 35.0 2.0 36.0 90-91 29.17121970630877 35.0 31.0 35.0 2.0 35.5 92-93 28.974769618274543 34.0 30.5 35.0 2.0 35.0 94-95 28.757242002481416 34.0 30.0 35.0 2.0 35.0 96-97 28.494766644709458 34.0 30.0 35.0 2.0 35.0 98-99 28.26484864434452 34.0 30.0 35.0 2.0 35.0 100-101 27.21189056326399 33.5 27.5 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 75153.0 3 13484.0 4 9532.0 5 7201.0 6 6651.0 7 6876.0 8 7347.0 9 7703.0 10 8301.0 11 9126.0 12 9312.0 13 9620.0 14 10442.0 15 11571.0 16 11932.0 17 12834.0 18 11811.0 19 10317.0 20 10516.0 21 11233.0 22 12183.0 23 13959.0 24 15865.0 25 18884.0 26 22198.0 27 26415.0 28 31403.0 29 36769.0 30 44105.0 31 53583.0 32 67233.0 33 87275.0 34 124742.0 35 179172.0 36 291416.0 37 537728.0 38 583431.0 39 108159.0 40 17.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.32943356978509 17.956253442868764 12.766405953254543 24.94790703409161 2 16.147379432828636 19.750960102304845 39.24011208983097 24.86154837503555 3 19.529463329035217 23.60307810035326 29.264106833055052 27.60335173755647 4 13.54424458800591 15.304688923201512 36.29208102339649 34.85898546539609 5 14.302276790419544 37.508953837770974 33.937680095931846 14.251089275877634 6 33.80758368498209 34.531702462409406 17.160048460134302 14.500665392474207 7 29.32990291208094 32.01181801591401 20.528216487094372 18.13006258491068 8 27.16989279463186 34.57287635000751 19.890647502610353 18.366583352750272 9 27.737218731374174 15.361498598999837 19.00875113171469 37.8925315379113 10-11 26.08916764879433 25.107218916653544 27.49516093374495 21.308452500807174 12-13 26.416632386661753 22.523981257568856 27.465809298725542 23.59357705704385 14-15 23.670758557495137 24.069759672669942 24.79738737291223 27.462094396922694 16-17 23.747686903284674 27.208220756164664 25.689763601366572 23.35432873918409 18-19 23.811750522283432 26.72918162739302 27.006705586424683 22.452362263898863 20-21 24.25056987010043 25.758963586965706 27.060404739490085 22.930061803443774 22-23 24.107357875560364 25.543173809056483 26.691277699592277 23.658190615790872 24-25 23.810970680940393 25.793009344166425 26.67697770870166 23.71904226619152 26-27 23.57020590673305 26.037591265620858 26.789368858751512 23.602833968894583 28-29 23.58368880279159 26.558876716511914 26.391062527634368 23.466371953062126 30-31 24.27566670311211 25.97377916049579 26.37796574791019 23.372588388481915 32-33 23.86228957848706 25.981980312883536 26.352003320545997 23.803726788083406 34-35 24.087212385827 26.14228656895385 26.55882369311825 23.211677352100896 36-37 23.992292469534423 26.19492959941355 26.532680676551664 23.280097254500365 38-39 24.00555396530064 26.23284512507355 26.424152791692507 23.337448117933306 40-41 24.101174104463833 25.974767895368007 26.432864827215802 23.491193172952364 42-43 23.78262304531618 25.99731225683782 26.27389445299925 23.946170244846748 44-45 23.627669185748623 26.05524350517135 26.52338213984101 23.793705169239015 46-47 23.81714344433363 25.950674381776878 26.248753357570504 23.983428816318987 48-49 23.5854345083584 26.173337355959607 26.345294672310292 23.895933463371698 50-51 23.76560382309846 26.110672789975318 26.424770485450505 23.69895290147572 52-53 23.964085963474584 26.00445888476103 26.33414551816363 23.697309633600756 54-55 23.26597394176507 25.78895402628924 26.73287102993873 24.21220100200696 56-57 23.501444721766585 25.925366796812447 26.434942908196636 24.13824557322433 58-59 23.66883656162134 25.995422547974222 26.544900016609795 23.790840873794643 60-61 23.93847631976444 25.888705920218225 26.59113034804943 23.581687411967902 62-63 23.79598468375491 25.812644864425422 26.731492107067133 23.659878344752535 64-65 23.420464528428223 25.52944613764972 26.828756301721015 24.221333032201038 66-67 23.4638243264557 25.947088278074897 26.483820757798078 24.105266637671324 68-69 23.445746346440995 25.80418524827633 26.56891050597605 24.181157899306626 70-71 23.443773221247465 25.597948366697594 26.646861821382068 24.311416590672874 72-73 23.28825333370769 25.957708552495728 26.430372517827198 24.32366559596938 74-75 23.205722333720363 25.893074223114382 26.626267147775778 24.274936295389473 76-77 23.20591659586263 25.459625569261483 26.6784439983696 24.65601383650629 78-79 23.15880736483029 25.42919119555304 26.846600160413292 24.565401279203375 80-81 23.32658356336066 25.68351878269897 26.480922504859155 24.50897514908121 82-83 23.33987852944621 25.75064595468637 26.582399756517113 24.327075759350308 84-85 23.298667392198908 25.73698154951857 26.527073413532264 24.437277644750253 86-87 22.951985194953693 25.930146157998852 26.576452565882658 24.5414160811648 88-89 22.976969981892324 25.5119452905097 26.75824755924836 24.75283716834961 90-91 23.19977306800032 25.24983037868879 26.884908105687522 24.665488447623368 92-93 23.341390013368922 25.237900487484588 26.823306110081752 24.597403389064734 94-95 23.19245249487927 25.161949841222913 26.83126594719065 24.814331716707166 96-97 22.943919070496538 25.033759808673828 26.977862570782037 25.0444585500476 98-99 22.736002693331713 24.863336324817396 27.080075819678257 25.32058516217263 100-101 22.933189835079943 24.880457414628733 27.108219983459982 25.07813276683134 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 141.0 1 128.0 2 166.5 3 221.5 4 208.5 5 237.5 6 356.5 7 617.5 8 934.5 9 1034.5 10 870.5 11 723.0 12 717.0 13 794.5 14 896.5 15 1016.5 16 1143.0 17 1236.5 18 1395.0 19 1533.5 20 1633.0 21 1757.5 22 1923.5 23 2178.5 24 2457.0 25 2925.5 26 3638.5 27 4631.0 28 6080.5 29 8343.0 30 11624.0 31 16207.0 32 22429.0 33 27734.5 34 32302.5 35 38148.5 36 45645.5 37 52489.5 38 58354.5 39 64212.5 40 68624.0 41 72355.0 42 76814.0 43 83214.0 44 89866.5 45 96845.5 46 101560.5 47 105245.0 48 110989.0 49 114119.0 50 113625.5 51 111395.0 52 108537.0 53 105715.5 54 103288.5 55 98133.5 56 89654.5 57 80686.0 58 72598.5 59 63475.5 60 51716.5 61 41593.0 62 33802.5 63 25986.0 64 18913.5 65 13878.5 66 10477.0 67 7899.5 68 6073.5 69 4647.5 70 3514.0 71 2638.0 72 1927.5 73 1544.0 74 1261.5 75 988.5 76 766.5 77 533.0 78 342.5 79 266.5 80 214.0 81 140.0 82 102.0 83 80.5 84 68.5 85 65.5 86 48.0 87 38.5 88 36.0 89 30.0 90 27.5 91 25.0 92 22.0 93 16.0 94 12.5 95 10.5 96 9.5 97 8.5 98 7.0 99 4.0 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.04945340864774743 2 0.05740411743355891 3 0.04853907713737911 4 0.05410457328744714 5 0.0482608023298757 6 0.017571066416643376 7 0.014152261638744442 8 0.020393568035606453 9 0.020274307403819282 10-11 0.021904202704910634 12-13 0.026654751204432996 14-15 0.04353013060231787 16-17 0.029517006367325134 18-19 0.02309680902278236 20-21 0.026694504748362054 22-23 0.046889305064323226 24-25 0.041443069546042356 26-27 0.031504683563778 28-29 0.02047307512346457 30-31 0.012880148233014602 32-33 0.009938385982264354 34-35 0.009421589911186608 36-37 0.0014708811253751244 38-39 0.007115884363301277 40-41 0.0036772028134378107 42-43 0.2072948548180699 44-45 0.18276691821384147 46-47 0.189028101382668 48-49 0.18690128678246343 50-51 0.18509250053369133 52-53 0.19008157029678802 54-55 0.18835229113587404 56-57 0.198012402310635 58-59 0.19606447865811116 60-61 0.20079515038566897 62-63 0.19725708497598288 64-65 0.1977540042750961 66-67 0.18886908720695178 68-69 0.18795475569658346 70-71 0.17209309166888953 72-73 0.17962638824344593 74-75 0.17871205673307763 76-77 0.17732068269556062 78-79 0.2030809791615898 80-81 0.21029624738471372 82-83 0.20914339461077106 84-85 0.20504877958607814 86-87 0.2203936475426943 88-89 0.2192010412248226 90-91 0.21848547743409955 92-93 0.22156637708860152 94-95 0.23249860166909228 96-97 0.23287626033641837 98-99 0.22248070859896982 100-101 0.23170353079051115 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2515499.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 61.05245904080642 #Duplication Level Percentage of deduplicated Percentage of total 1 79.98154299816932 48.83069877916229 2 11.226358674311648 13.707936062816273 3 3.61231389753123 6.6162193881468365 4 1.639946186962354 4.00490989634583 5 0.9046850855679874 2.7616624565734 6 0.5449845448998206 1.9963587963221292 7 0.39995702102614816 1.7092851750997304 8 0.269993958467868 1.3187036072499758 9 0.19784308497110248 1.0870926157534515 >10 1.1391880770303964 12.276748481783489 >50 0.05784750413852613 2.4143547066068654 >100 0.023836921940517064 2.5231041012031263 >500 0.0012408197686672826 0.49045445356309697 >1k 2.6122521445310227E-4 0.26247147937359677 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.975354392905742E-5 2 0.0 0.0 0.0 0.0 3.975354392905742E-5 3 0.0 0.0 0.0 0.0 3.975354392905742E-5 4 0.0 0.0 0.0 0.0 3.975354392905742E-5 5 0.0 0.0 0.0 3.975354392905742E-5 3.975354392905742E-5 6 0.0 0.0 0.0 3.975354392905742E-5 3.975354392905742E-5 7 0.0 0.0 0.0 3.975354392905742E-5 3.975354392905742E-5 8 0.0 0.0 0.0 3.975354392905742E-5 7.950708785811484E-5 9 0.0 0.0 0.0 3.975354392905742E-5 1.5901417571622967E-4 10-11 0.0 0.0 0.0 3.975354392905742E-5 1.5901417571622967E-4 12-13 0.0 0.0 0.0 3.975354392905742E-5 1.5901417571622967E-4 14-15 0.0 0.0 0.0 3.975354392905742E-5 1.5901417571622967E-4 16-17 0.0 0.0 0.0 5.963031589358613E-5 1.7889094768075837E-4 18-19 0.0 0.0 0.0 9.938385982264354E-5 1.9876771964528708E-4 20-21 0.0 0.0 0.0 1.7889094768075837E-4 1.9876771964528708E-4 22-23 0.0 0.0 0.0 3.3790512339698805E-4 1.9876771964528708E-4 24-25 1.987677196452871E-5 0.0 0.0 9.540850542973779E-4 2.1864449160981578E-4 26-27 3.975354392905742E-5 0.0 0.0 0.0016696488450204114 2.3852126357434448E-4 28-29 3.975354392905742E-5 0.0 0.0 0.006122045765074842 2.3852126357434448E-4 30-31 3.975354392905742E-5 0.0 0.0 0.021943956248839692 2.3852126357434448E-4 32-33 7.950708785811484E-5 0.0 0.0 0.05239517089849767 2.3852126357434448E-4 34-35 1.1926063178717224E-4 3.975354392905742E-5 0.0 0.0940966384800789 2.3852126357434448E-4 36-37 1.1926063178717224E-4 7.950708785811484E-5 0.0 0.15589352251779864 2.3852126357434448E-4 38-39 1.3913740375170097E-4 1.3913740375170097E-4 0.0 0.2591334761015608 2.3852126357434448E-4 40-41 1.5901417571622967E-4 1.5901417571622967E-4 0.0 0.37537283855012465 2.3852126357434448E-4 42-43 1.5901417571622967E-4 1.5901417571622967E-4 0.0 0.49841005701055735 2.3852126357434448E-4 44-45 1.5901417571622967E-4 1.5901417571622967E-4 0.0 0.6485989459745363 2.3852126357434448E-4 46-47 1.5901417571622967E-4 1.5901417571622967E-4 0.0 0.8193602939218023 2.3852126357434448E-4 48-49 1.5901417571622967E-4 1.9876771964528708E-4 0.0 0.9916123997664081 2.3852126357434448E-4 50-51 1.5901417571622967E-4 2.1864449160981578E-4 0.0 1.1762079810009864 2.3852126357434448E-4 52-53 1.5901417571622967E-4 2.3852126357434448E-4 0.0 1.3699667541112122 2.3852126357434448E-4 54-55 1.5901417571622967E-4 2.3852126357434448E-4 0.0 1.5945345237664574 2.3852126357434448E-4 56-57 1.5901417571622967E-4 2.3852126357434448E-4 0.0 1.847009281259901 2.3852126357434448E-4 58-59 1.5901417571622967E-4 2.3852126357434448E-4 0.0 2.111211334212417 2.3852126357434448E-4 60-61 1.5901417571622967E-4 2.782748075034019E-4 0.0 2.386842531044536 2.3852126357434448E-4 62-63 1.5901417571622967E-4 2.782748075034019E-4 0.0 2.6765464824275425 2.3852126357434448E-4 64-65 1.5901417571622967E-4 2.782748075034019E-4 0.0 2.9917125786971095 2.3852126357434448E-4 66-67 1.5901417571622967E-4 2.782748075034019E-4 0.0 3.3573259222126506 2.782748075034019E-4 68-69 1.5901417571622967E-4 2.782748075034019E-4 0.0 3.7475268326483135 2.782748075034019E-4 70-71 1.5901417571622967E-4 2.782748075034019E-4 0.0 4.155259055956691 2.782748075034019E-4 72-73 1.7889094768075837E-4 2.782748075034019E-4 0.0 4.574181901881097 3.1802835143245934E-4 74-75 1.9876771964528708E-4 2.782748075034019E-4 0.0 5.016777983215259 3.1802835143245934E-4 76-77 1.9876771964528708E-4 3.1802835143245934E-4 0.0 5.511928249623633 3.1802835143245934E-4 78-79 1.9876771964528708E-4 3.1802835143245934E-4 0.0 6.059235165666932 3.1802835143245934E-4 80-81 1.9876771964528708E-4 3.5778189536151675E-4 0.0 6.625603906024212 3.1802835143245934E-4 82-83 1.9876771964528708E-4 3.5778189536151675E-4 0.0 7.207019362758642 3.5778189536151675E-4 84-85 1.9876771964528708E-4 3.5778189536151675E-4 0.0 7.819522090845593 3.5778189536151675E-4 86-87 1.9876771964528708E-4 3.5778189536151675E-4 0.0 8.482273298458875 3.5778189536151675E-4 88-89 1.9876771964528708E-4 3.5778189536151675E-4 0.0 9.198890558096029 3.5778189536151675E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2310 0.0 54.449295 1 GTATCAA 4420 0.0 45.637836 1 TCAACGC 5415 0.0 36.723835 4 CAACGCA 5555 0.0 35.71073 5 ATCAACG 5725 0.0 34.486595 3 TATCAAC 5735 0.0 34.4292 2 AACGCAG 5895 0.0 33.559227 6 GTACATG 9295 0.0 30.53586 1 TACATGG 9575 0.0 28.999071 2 ACATGGG 9885 0.0 27.175167 3 ACGCAGA 7180 0.0 26.830067 7 GTATACG 110 9.530898E-5 25.8891 1 CGCAGAG 7430 0.0 25.67595 8 CATGGGG 8225 0.0 24.235157 4 ATGGGGG 5490 0.0 22.561848 5 GCAGAGT 8170 0.0 22.015251 9 GAGTACA 6705 0.0 20.386942 1 GTACACT 2740 0.0 19.226706 4 AGTACAC 2680 0.0 18.948786 3 GTATAGG 685 0.0 18.70818 1 >>END_MODULE