##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921410_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2515499 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.35866044868235 33.0 31.0 34.0 28.0 34.0 2 31.480328157554425 34.0 31.0 34.0 28.0 34.0 3 31.556807217971464 34.0 31.0 34.0 28.0 34.0 4 35.05640908622902 37.0 35.0 37.0 32.0 37.0 5 34.7916202709681 37.0 35.0 37.0 32.0 37.0 6 34.74950019856895 37.0 35.0 37.0 32.0 37.0 7 34.61317217776672 37.0 35.0 37.0 32.0 37.0 8 34.572200187716234 37.0 35.0 37.0 32.0 37.0 9 36.180063279691225 39.0 37.0 39.0 32.0 39.0 10-11 36.02867522507462 39.0 37.0 39.0 31.0 39.0 12-13 35.95582228416708 39.0 37.0 39.0 31.0 39.0 14-15 37.17284502995231 40.0 38.0 41.0 31.0 41.0 16-17 37.15154050945756 40.0 38.0 41.0 31.0 41.0 18-19 37.121402353966346 40.0 38.0 41.0 31.0 41.0 20-21 37.082415457131965 40.0 38.0 41.0 31.0 41.0 22-23 36.976805397259156 40.0 37.0 41.0 31.0 41.0 24-25 36.90342790833946 40.0 37.0 41.0 30.0 41.0 26-27 36.75915633438932 40.0 37.0 41.0 30.0 41.0 28-29 36.60419741768929 40.0 37.0 41.0 30.0 41.0 30-31 36.455548978552564 40.0 36.5 41.0 30.0 41.0 32-33 36.39208681855966 40.0 36.5 41.0 30.0 41.0 34-35 36.51517949321387 40.0 37.0 41.0 30.0 41.0 36-37 36.48545636472127 40.0 37.0 41.0 30.0 41.0 38-39 36.39387771571366 40.0 36.5 41.0 30.0 41.0 40-41 36.26373216606328 40.0 36.0 41.0 29.0 41.0 42-43 36.15820181204604 40.0 36.0 41.0 29.0 41.0 44-45 36.01052832857417 40.0 36.0 41.0 28.0 41.0 46-47 35.84127264610322 40.0 35.5 41.0 27.5 41.0 48-49 35.67526641831303 40.0 35.0 41.0 27.0 41.0 50-51 35.519255821608354 39.5 35.0 41.0 26.5 41.0 52-53 35.35669662361225 39.0 35.0 41.0 26.0 41.0 54-55 35.15117855344009 39.0 35.0 41.0 26.0 41.0 56-57 34.892766405393125 39.0 35.0 41.0 25.0 41.0 58-59 34.666376134516454 38.5 35.0 40.5 25.0 41.0 60-61 34.39229194684633 38.0 34.0 40.0 24.0 41.0 62-63 34.087443087832675 37.5 34.0 40.0 23.0 41.0 64-65 33.77506749157921 37.0 34.0 40.0 23.0 41.0 66-67 33.44472985280456 36.5 34.0 39.0 22.0 41.0 68-69 33.08420536044737 36.0 33.5 39.0 22.0 41.0 70-71 32.70264130496574 35.5 33.0 39.0 20.5 40.0 72-73 32.30513269931731 35.0 33.0 37.5 19.5 40.0 74-75 31.89923490329354 35.0 33.0 37.0 18.0 39.0 76-77 29.154277143421645 33.0 28.5 34.5 10.5 36.5 78-79 30.80563776809293 34.5 31.5 36.0 12.0 37.5 80-81 31.00245378749902 35.0 32.0 36.0 13.0 37.0 82-83 30.83625038213094 35.0 32.0 35.0 10.5 37.0 84-85 30.60747151956729 35.0 32.0 35.0 7.0 36.5 86-87 30.36658909425128 35.0 32.0 35.0 3.5 36.0 88-89 30.091790336629032 35.0 31.5 35.0 2.0 36.0 90-91 29.90835695025122 34.0 31.0 35.0 2.0 35.0 92-93 29.7649293440387 34.0 31.0 35.0 2.0 35.0 94-95 29.666232624222868 34.0 31.0 35.0 2.0 35.0 96-97 29.47701966886093 34.0 31.0 35.0 2.0 35.0 98-99 29.219570947951084 34.0 31.0 35.0 2.0 35.0 100-101 28.142932873358326 33.0 28.5 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 48119.0 3 16484.0 4 9231.0 5 6440.0 6 5525.0 7 5709.0 8 5879.0 9 6203.0 10 6963.0 11 7519.0 12 8159.0 13 8809.0 14 9645.0 15 10852.0 16 12152.0 17 13327.0 18 11854.0 19 10250.0 20 9652.0 21 9531.0 22 10020.0 23 11093.0 24 13110.0 25 15815.0 26 19004.0 27 22377.0 28 27336.0 29 32506.0 30 39674.0 31 49255.0 32 62179.0 33 83112.0 34 121570.0 35 177797.0 36 303055.0 37 593312.0 38 630502.0 39 81475.0 40 4.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.177742247305886 19.55798535854369 13.34177624402215 25.92249615012828 2 15.21063490612167 21.213123486875322 37.669002858290035 25.907238748712974 3 18.083121532014303 24.810511865445832 29.12954925578324 27.976817346756626 4 13.148590976765082 16.494904378835134 35.342481001989746 35.01402364241004 5 14.032081691406576 37.85758878333724 33.98269465530473 14.127634869951446 6 33.69571915105752 35.29534768803626 16.86280714573364 14.146126015172577 7 29.029304757391785 32.25646154873631 20.552725983265326 18.161507710606575 8 27.016189144610646 35.23634529156004 19.606543717210155 18.140921846619154 9 27.445897392882046 15.378982610997902 18.96435616327264 38.21076383284741 10-11 25.934851342406002 25.500988556933695 27.463100473476693 21.101059627183613 12-13 26.321059976597 22.726848989033748 27.58761266942279 23.364478364946464 14-15 23.47683951653877 24.324868547747798 24.82775839024363 27.3705335454698 16-17 23.626954313338516 27.522054817474185 25.62684022041798 23.224150648769317 18-19 23.664792942925633 26.909687575780467 27.082934140068136 22.342585341225764 20-21 23.994102911235377 25.90226869361038 27.188524966522277 22.91510342863197 22-23 23.91966591068557 25.630462394081484 26.818439313137176 23.63143238209577 24-25 23.692643645809234 25.92857841395086 26.750714979140977 23.628062961098934 26-27 23.42520181973189 26.19876835946841 26.897914488025982 23.47811533277372 28-29 23.473889938230844 26.75212387385686 26.51326881967517 23.260717368237128 30-31 24.196061576434982 26.09760257769218 26.404228350319947 23.302107495552892 32-33 23.729033584235527 26.13557544987353 26.414309277456955 23.721081688433987 34-35 23.94031163364142 26.283487933549537 26.663915391120458 23.112285041688583 36-37 23.812877325571804 26.353860003454603 26.6709362235928 23.162326447380792 38-39 23.96837360772874 26.313698223887634 26.482193954746062 23.23573421363756 40-41 24.071628371469508 26.128838994788843 26.414065195923307 23.385467437818342 42-43 23.714395557386148 26.13651543607938 26.298565246915253 23.85052375961922 44-45 23.58092751955698 26.159568413597146 26.50694545355514 23.752558613290738 46-47 23.73450357776419 26.09440065392894 26.256908834004307 23.914186934302563 48-49 23.46814673157854 26.33508998272507 26.371230178057058 23.825533107639338 50-51 23.65988615482721 26.21629390151494 26.427497449655036 23.696322494002814 52-53 23.923485015633357 26.129368245506278 26.260616866531105 23.68652987232926 54-55 23.199250558592645 25.934381737672847 26.72260312024754 24.143764583486966 56-57 23.404141972431244 26.042425549551307 26.375798970122418 24.17763350789503 58-59 23.58629529514526 26.106439391981638 26.44805512606485 23.859210186808248 60-61 23.842644865193233 26.11038268137768 26.4552912888462 23.59168116458289 62-63 23.65761621673526 26.025300279539245 26.552669419846232 23.764414083879267 64-65 23.255447262812943 25.703337801179455 26.64735173242871 24.39386320357889 66-67 23.315453600781684 26.13564735886206 26.279627722970723 24.269271317385535 68-69 23.266812549531714 26.00000874820016 26.34592053532623 24.3872581669419 70-71 23.301453712309485 25.74466316611247 26.38527810554875 24.568605016029295 72-73 23.1709705324549 26.13752740469964 26.134286656687284 24.557215406158175 74-75 22.99397047447099 26.04720434359647 26.276400671285984 24.682424510646555 76-77 22.944700496636987 25.561354003728514 26.4802131193692 25.013732380265296 78-79 22.807785232816872 25.60574872290493 26.55064890531725 25.035817138960955 80-81 23.00452359824338 25.830131786143145 26.19124801274706 24.974096602866418 82-83 22.98393221390315 25.901541569084323 26.243851815329805 24.870674401682724 84-85 22.881382892632875 25.89086206505742 26.18245090510846 25.045304137201246 86-87 22.548854226261568 26.07376254128708 26.189258953060634 25.18812427939071 88-89 22.531224447946098 25.742620033746892 26.330769400927828 25.39538611737917 90-91 22.647608557725246 25.389720728225747 26.4704427967614 25.492227917287607 92-93 22.674832180397 25.429887649610766 26.40000477282829 25.495275397163947 94-95 22.47773048867198 25.373378201332326 26.440414434646716 25.70847687534898 96-97 22.12516991332482 25.283062976169795 26.570686924933597 26.021080185571787 98-99 21.889012678557762 25.14568365522512 26.611117019003427 26.35418664721369 100-101 21.872398585068805 25.271998180848183 26.532007292508958 26.32359594157406 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 158.0 1 128.5 2 128.0 3 180.0 4 180.0 5 186.5 6 292.0 7 558.0 8 836.0 9 903.5 10 735.5 11 588.0 12 570.0 13 623.5 14 695.0 15 702.5 16 791.0 17 890.5 18 947.5 19 1070.5 20 1233.0 21 1415.0 22 1630.0 23 1895.0 24 2240.5 25 2758.5 26 3538.0 27 4832.0 28 6526.5 29 8982.5 30 12608.5 31 17503.5 32 23827.5 33 28976.0 34 33197.0 35 38495.0 36 45669.5 37 52411.5 38 58271.0 39 64289.5 40 68667.0 41 72236.5 42 76486.0 43 82958.0 44 90092.5 45 97067.0 46 101589.0 47 105585.5 48 111758.5 49 114810.0 50 114387.0 51 112457.0 52 109897.5 53 106815.0 54 103484.0 55 98214.0 56 90311.5 57 81087.0 58 72106.5 59 62922.5 60 51495.5 61 41097.0 62 33074.0 63 25109.5 64 17987.5 65 13146.5 66 9702.5 67 7369.0 68 5659.0 69 4260.0 70 3219.5 71 2359.0 72 1729.5 73 1385.5 74 1083.0 75 833.5 76 649.5 77 417.5 78 233.0 79 139.0 80 84.5 81 54.5 82 32.0 83 16.5 84 10.5 85 7.5 86 5.5 87 4.5 88 2.5 89 2.5 90 2.5 91 2.0 92 2.0 93 1.5 94 1.5 95 1.0 96 0.5 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.148161458223597 2 3.5778189536151675E-4 3 0.006758102467939761 4 0.004134368568621971 5 0.026595120888539412 6 0.0015901417571622966 7 1.1926063178717224E-4 8 0.0019081701085947558 9 3.975354392905742E-5 10-11 0.0990857082431756 12-13 3.7765866732604545E-4 14-15 0.005446235518280866 16-17 2.1864449160981578E-4 18-19 3.5778189536151675E-4 20-21 8.14947650545677E-4 22-23 1.5901417571622967E-4 24-25 0.001629895301091354 26-27 0.0029218854787857198 28-29 0.0065990882922235304 30-31 0.015146100236970876 32-33 0.014927455745361059 34-35 0.01200557026657534 36-37 6.1617993090039E-4 38-39 1.9876771964528708E-4 40-41 0.005048700078990292 42-43 0.008865040296179802 44-45 0.00876565643635716 46-47 0.009580604086902837 48-49 0.011687541915142879 50-51 0.006082292221145785 52-53 0.0017491559328785262 54-55 0.001013715370190964 56-57 0.006022661905252199 58-59 0.009779371806548124 60-61 0.007751941066166196 62-63 0.018584781786834342 64-65 0.03436693872667013 66-67 0.03657326041473282 68-69 0.027668466574623962 70-71 0.04134368568621971 72-73 0.025740419694064678 74-75 0.024826088183696356 76-77 0.2353211032880554 78-79 0.06712385892421345 80-81 0.05366728430422751 82-83 0.021029624738471375 84-85 0.032915934373259535 86-87 0.07954684140204389 88-89 0.2594912579969223 90-91 0.31286039072168187 92-93 0.050347863386151215 94-95 0.004790302043451418 96-97 0.009779371806548124 98-99 0.0012522366337653086 100-101 0.001629895301091354 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2515499.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 60.57575636571367 #Duplication Level Percentage of deduplicated Percentage of total 1 79.35622962513226 48.07063631873641 2 11.74844869611893 14.233423317823735 3 3.6587559059424484 6.648957190799573 4 1.6664676237013856 4.037901470587398 5 0.8999238800734739 2.7256784853509246 6 0.5622097185741123 2.0433767363269126 7 0.3878279861346412 1.6445081519928189 8 0.2733963948114818 1.3248954722691832 9 0.20842461144363386 1.136293063508529 >10 1.1536139322147572 12.43679768803637 >50 0.05992503405810786 2.483408308697141 >100 0.02345830884149753 2.5202551248791174 >500 0.0011205405102233848 0.4594114931779241 >1k 1.977424429793927E-4 0.2344571778140066 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 3.975354392905742E-5 0.0 0.0 0.0 3.975354392905742E-5 7 3.975354392905742E-5 0.0 0.0 0.0 3.975354392905742E-5 8 3.975354392905742E-5 0.0 0.0 0.0 3.975354392905742E-5 9 3.975354392905742E-5 0.0 0.0 0.0 3.975354392905742E-5 10-11 3.975354392905742E-5 0.0 1.987677196452871E-5 3.975354392905742E-5 3.975354392905742E-5 12-13 3.975354392905742E-5 0.0 3.975354392905742E-5 3.975354392905742E-5 3.975354392905742E-5 14-15 3.975354392905742E-5 1.987677196452871E-5 3.975354392905742E-5 3.975354392905742E-5 5.963031589358613E-5 16-17 3.975354392905742E-5 3.975354392905742E-5 3.975354392905742E-5 7.950708785811484E-5 7.950708785811484E-5 18-19 3.975354392905742E-5 5.963031589358613E-5 3.975354392905742E-5 7.950708785811484E-5 1.1926063178717224E-4 20-21 3.975354392905742E-5 7.950708785811484E-5 3.975354392905742E-5 1.3913740375170097E-4 1.1926063178717224E-4 22-23 3.975354392905742E-5 7.950708785811484E-5 3.975354392905742E-5 3.1802835143245934E-4 1.1926063178717224E-4 24-25 3.975354392905742E-5 7.950708785811484E-5 3.975354392905742E-5 9.739618262619066E-4 1.1926063178717224E-4 26-27 3.975354392905742E-5 7.950708785811484E-5 3.975354392905742E-5 0.001709402388949469 1.1926063178717224E-4 28-29 3.975354392905742E-5 7.950708785811484E-5 3.975354392905742E-5 0.0063605670286491865 1.1926063178717224E-4 30-31 3.975354392905742E-5 7.950708785811484E-5 3.975354392905742E-5 0.02244087554795291 1.3913740375170097E-4 32-33 3.975354392905742E-5 7.950708785811484E-5 3.975354392905742E-5 0.05336913272475958 1.5901417571622967E-4 34-35 3.975354392905742E-5 7.950708785811484E-5 3.975354392905742E-5 0.09586567118492195 1.9876771964528708E-4 36-37 3.975354392905742E-5 7.950708785811484E-5 3.975354392905742E-5 0.15853713318908097 1.9876771964528708E-4 38-39 3.975354392905742E-5 1.1926063178717225E-4 3.975354392905742E-5 0.2625721576514242 1.9876771964528708E-4 40-41 3.975354392905742E-5 1.7889094768075837E-4 3.975354392905742E-5 0.3799047425580372 1.9876771964528708E-4 42-43 3.975354392905742E-5 1.9876771964528708E-4 3.975354392905742E-5 0.5035978944932994 1.9876771964528708E-4 44-45 3.975354392905742E-5 1.9876771964528708E-4 3.975354392905742E-5 0.6538265370012073 1.9876771964528708E-4 46-47 3.975354392905742E-5 1.9876771964528708E-4 3.975354392905742E-5 0.8240313353334667 2.1864449160981578E-4 48-49 3.975354392905742E-5 1.9876771964528708E-4 3.975354392905742E-5 0.9972176494604053 2.3852126357434448E-4 50-51 3.975354392905742E-5 1.9876771964528708E-4 3.975354392905742E-5 1.1807001314649699 2.3852126357434448E-4 52-53 3.975354392905742E-5 1.9876771964528708E-4 3.975354392905742E-5 1.3748564400144863 2.3852126357434448E-4 54-55 3.975354392905742E-5 1.9876771964528708E-4 3.975354392905742E-5 1.6000205128286673 2.3852126357434448E-4 56-57 3.975354392905742E-5 1.9876771964528708E-4 7.950708785811484E-5 1.8533897250605147 2.3852126357434448E-4 58-59 3.975354392905742E-5 1.9876771964528708E-4 7.950708785811484E-5 2.11741288706535 2.3852126357434448E-4 60-61 3.975354392905742E-5 1.9876771964528708E-4 7.950708785811484E-5 2.392328520106746 2.3852126357434448E-4 62-63 3.975354392905742E-5 1.9876771964528708E-4 7.950708785811484E-5 2.6815355521906388 2.3852126357434448E-4 64-65 3.975354392905742E-5 1.9876771964528708E-4 7.950708785811484E-5 2.9972581980752127 2.3852126357434448E-4 66-67 3.975354392905742E-5 2.782748075034019E-4 7.950708785811484E-5 3.362652897099144 2.3852126357434448E-4 68-69 3.975354392905742E-5 2.782748075034019E-4 7.950708785811484E-5 3.751541940585148 2.3852126357434448E-4 70-71 3.975354392905742E-5 2.782748075034019E-4 7.950708785811484E-5 4.160466770211397 2.3852126357434448E-4 72-73 3.975354392905742E-5 2.782748075034019E-4 7.950708785811484E-5 4.5803437011901025 2.3852126357434448E-4 74-75 3.975354392905742E-5 2.782748075034019E-4 7.950708785811484E-5 5.024609431369283 2.3852126357434448E-4 76-77 3.975354392905742E-5 2.782748075034019E-4 7.950708785811484E-5 5.523417023819131 2.3852126357434448E-4 78-79 3.975354392905742E-5 2.782748075034019E-4 7.950708785811484E-5 6.075713009625526 2.3852126357434448E-4 80-81 3.975354392905742E-5 2.782748075034019E-4 7.950708785811484E-5 6.646176365007499 2.3852126357434448E-4 82-83 3.975354392905742E-5 2.782748075034019E-4 7.950708785811484E-5 7.2312491477834016 2.3852126357434448E-4 84-85 3.975354392905742E-5 2.782748075034019E-4 7.950708785811484E-5 7.849456509424174 2.3852126357434448E-4 86-87 3.975354392905742E-5 2.782748075034019E-4 7.950708785811484E-5 8.519562122664329 2.7827480750340194E-4 88-89 3.975354392905742E-5 2.782748075034019E-4 7.950708785811484E-5 9.242361058382452 3.1802835143245934E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2500 0.0 57.032497 1 GTATCAA 4540 0.0 42.083447 1 TCAACGC 5790 0.0 32.544235 4 CAACGCA 6020 0.0 31.194649 5 ATCAACG 6110 0.0 30.762108 3 TATCAAC 6115 0.0 30.736958 2 GTACATG 8650 0.0 30.604141 1 AACGCAG 6380 0.0 29.50603 6 TACATGG 9040 0.0 28.77228 2 ACATGGG 9330 0.0 27.165752 3 ACGCAGA 7630 0.0 23.737123 7 CATGGGG 8230 0.0 23.703045 4 CGCAGAG 7980 0.0 22.517311 8 ATGGGGG 5215 0.0 21.879452 5 TACCGTA 205 6.78554E-7 20.869703 7 TCTATAC 495 0.0 19.177277 3 ATAGGAC 520 0.0 19.168056 3 GCAGAGT 8830 0.0 19.057686 9 GAGTACA 6570 0.0 18.663603 1 GTAAGTA 2025 0.0 18.516726 2 >>END_MODULE