##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921409_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3089380 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.4560283940467 33.0 31.0 34.0 30.0 34.0 2 31.585127436573035 34.0 31.0 34.0 29.0 34.0 3 31.658504619049776 34.0 31.0 34.0 28.0 34.0 4 35.156606827259836 37.0 35.0 37.0 33.0 37.0 5 34.90790093805229 37.0 35.0 37.0 32.0 37.0 6 34.86352957551353 37.0 35.0 37.0 32.0 37.0 7 34.73685464397387 37.0 35.0 37.0 32.0 37.0 8 34.69931474923771 37.0 35.0 37.0 32.0 37.0 9 36.31690436268766 39.0 37.0 39.0 32.0 39.0 10-11 36.16969310994439 39.0 37.0 39.0 32.0 39.0 12-13 36.09358414957046 39.0 37.0 39.0 32.0 39.0 14-15 37.33115430927889 40.0 38.0 41.0 32.0 41.0 16-17 37.310552117253295 40.0 38.0 41.0 32.0 41.0 18-19 37.27639477824029 40.0 38.0 41.0 31.0 41.0 20-21 37.23634871721834 40.0 38.0 41.0 31.0 41.0 22-23 37.13225614848287 40.0 38.0 41.0 31.0 41.0 24-25 37.06182227501958 40.0 37.0 41.0 31.0 41.0 26-27 36.92544879555121 40.0 37.0 41.0 30.5 41.0 28-29 36.77718765577559 40.0 37.0 41.0 30.0 41.0 30-31 36.633590396778644 40.0 37.0 41.0 30.0 41.0 32-33 36.59072678013064 40.0 36.5 41.0 30.0 41.0 34-35 36.72866416562547 40.0 37.0 41.0 30.0 41.0 36-37 36.71128074241433 40.0 37.0 41.0 30.0 41.0 38-39 36.633938686726786 40.0 37.0 41.0 30.0 41.0 40-41 36.51346872187947 40.0 37.0 41.0 30.0 41.0 42-43 36.41883290498417 40.0 36.5 41.0 30.0 41.0 44-45 36.286988165910316 40.0 36.0 41.0 29.0 41.0 46-47 36.13173565569791 40.0 36.0 41.0 28.5 41.0 48-49 35.979669221656124 40.0 35.5 41.0 28.0 41.0 50-51 35.82923531582389 40.0 35.0 41.0 28.0 41.0 52-53 35.66172986165509 39.0 35.0 41.0 28.0 41.0 54-55 35.45420424162777 39.0 35.0 41.0 27.0 41.0 56-57 35.197734982423654 39.0 35.0 41.0 26.5 41.0 58-59 34.97010484304294 38.5 35.0 40.5 26.0 41.0 60-61 34.68863558383883 38.0 34.5 40.0 26.0 41.0 62-63 34.384992296188884 37.5 34.0 40.0 26.0 41.0 64-65 34.07107413137911 37.0 34.0 40.0 26.0 41.0 66-67 33.73500038842745 36.5 34.0 39.0 25.0 41.0 68-69 33.36470003690061 36.0 34.0 39.0 24.0 41.0 70-71 32.98163045659647 35.5 33.0 38.5 23.5 40.0 72-73 32.58144368773022 35.0 33.0 37.5 22.5 39.5 74-75 32.173228447131784 35.0 33.0 37.0 21.5 39.0 76-77 29.425267529407193 33.0 29.0 34.5 16.5 36.5 78-79 31.086817743365984 34.5 31.5 36.0 19.5 37.0 80-81 31.286116955505634 35.0 32.0 35.5 20.0 37.0 82-83 31.126332144313746 35.0 32.0 35.0 19.5 37.0 84-85 30.908201160103324 35.0 32.0 35.0 18.5 36.0 86-87 30.67077682253397 35.0 32.0 35.0 17.5 36.0 88-89 30.40758841579864 35.0 32.0 35.0 10.5 36.0 90-91 30.22950268338631 35.0 32.0 35.0 6.0 35.0 92-93 30.087837041736528 34.0 32.0 35.0 4.5 35.0 94-95 29.99582909839515 34.0 31.0 35.0 2.0 35.0 96-97 29.817700315273616 34.0 31.0 35.0 2.0 35.0 98-99 29.564092957162927 34.0 31.0 35.0 2.0 35.0 100-101 28.48614689678835 33.5 29.0 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 52770.0 3 18160.0 4 10261.0 5 7210.0 6 6349.0 7 6309.0 8 6590.0 9 6903.0 10 7995.0 11 8604.0 12 9271.0 13 10120.0 14 10579.0 15 11737.0 16 12919.0 17 13962.0 18 12947.0 19 11433.0 20 11058.0 21 10902.0 22 11663.0 23 13287.0 24 15571.0 25 18636.0 26 22532.0 27 27238.0 28 32788.0 29 39529.0 30 48193.0 31 60477.0 32 77297.0 33 101902.0 34 150554.0 35 221393.0 36 378825.0 37 745767.0 38 783337.0 39 94312.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.42117491755166 19.225334145524677 13.438568088077158 25.9149228488465 2 15.261846774934906 20.821923217853254 37.75715648916735 26.15907351804449 3 18.425296613626035 24.707853544149234 28.74089895002078 28.125950892203942 4 13.453219920802862 16.456729183398057 35.058281079600796 35.031769816198285 5 14.369446111865496 37.732475728501115 33.66778885722408 14.230289302409311 6 33.91619709556463 34.70578219842142 17.026818638520023 14.35120206749394 7 29.307254703621282 32.04217681569897 20.338935868905523 18.311632611774225 8 27.401375641200353 34.91221215780933 19.34734568059086 18.339066520399452 9 27.499854339705703 15.652104953097384 18.863493645974273 37.98454706122264 10-11 26.184043076289974 25.36937173389844 27.135502863192922 21.31108232661866 12-13 26.581793969777678 22.513394307969385 27.253742831876508 23.651068890376425 14-15 23.808012404465867 24.104188449474137 24.53222668578698 27.555572460273016 16-17 24.047777270304014 27.249426016960705 25.213789058441233 23.489007654294053 18-19 24.01718278297058 26.786160227088263 26.602368798961212 22.594288190979945 20-21 24.469154320809825 25.728928584954247 26.692250149950002 23.109666944285927 22-23 24.347168572745993 25.431143798111556 26.27560413217001 23.946083496972438 24-25 24.12709783152997 25.71202539328221 26.247515230693086 23.91336154449473 26-27 23.716457000836115 26.07559817316715 26.384974367822156 23.822970458174574 28-29 23.794945301925054 26.4913032901391 26.020952772178944 23.6927986357569 30-31 24.59553746073863 25.91065986298097 25.91951410754718 23.574288568733216 32-33 24.222905343621917 25.87765551483841 25.88223639579524 24.017202745744434 34-35 24.353264713832726 26.058338985081004 26.10646112110171 23.48193517998456 36-37 24.21217322850448 26.139567087348066 26.234149998397722 23.414109685749736 38-39 24.334606298881262 26.146381111513207 25.96103611929148 23.557976470314053 40-41 24.453317579651852 25.87383567075885 25.961268602966765 23.711578146622536 42-43 24.097041750347348 25.897438885586983 25.796730723661465 24.208788640404205 44-45 23.9482726555989 25.9221354427579 26.063729142323844 24.06586275931936 46-47 24.071345549271285 25.815976237789144 25.871639582513584 24.241038630425983 48-49 23.795339270013635 26.048868193525248 26.091583674431313 24.06420886202981 50-51 24.056224028579447 25.933223121876026 26.100790071775563 23.909762777768968 52-53 24.320200276500174 25.77422152189035 25.94433936948768 23.961238832121797 54-55 23.539793733276213 25.624326415641868 26.44252455088037 24.39335530020155 56-57 23.786875807955028 25.731357613702045 26.064145660847526 24.4176209174954 58-59 23.98311733359274 25.81658876065425 26.145084038625672 24.055209867127342 60-61 24.23775294058426 25.853283738076577 26.184104019905867 23.724859301433295 62-63 24.073500317113133 25.775551241047097 26.2169843787383 23.933964063101467 64-65 23.698869440905096 25.528001696729103 26.24733064684559 24.525798215520215 66-67 23.772750513482332 25.86453327427032 25.982756448926843 24.379959763320507 68-69 23.686754743030022 25.80614350118438 26.082002711968016 24.425099043817582 70-71 23.699071559928928 25.56987619827576 26.098974671341413 24.6320775704539 72-73 23.629318839784343 25.990138079514104 25.82157982727474 24.558963253426814 74-75 23.52872803470964 25.95151289688562 25.963897170703376 24.555861897701366 76-77 23.450581699079184 25.475853014795735 26.09994568169473 24.97361960443035 78-79 23.3506446475129 25.518618705483398 26.286727967268625 24.844008679735072 80-81 23.712798433529617 25.741391829403447 25.831944492124574 24.71386524494236 82-83 23.63320524446692 25.77637619988209 26.018805073005474 24.571613482645517 84-85 23.568690178606122 25.76354440544496 25.889792640754315 24.777972775194602 86-87 23.202985711418698 26.02934299543983 25.88215342216973 24.885517870971743 88-89 23.087273676134394 25.703296503574574 26.068381061429236 25.141048758861796 90-91 23.368562087513133 25.432912311511117 26.1632762806333 25.035249320342444 92-93 23.474094473691753 25.411687512762132 26.06068790900554 25.053530104540574 94-95 23.306327586357586 25.44455410898353 26.045045689541595 25.204072615117283 96-97 22.949715302756072 25.34894795231317 26.19229211630293 25.50904462862783 98-99 22.696560837783444 25.24483769604697 26.15737814761555 25.901223318554027 100-101 22.768219348354375 25.438650582285977 26.157106753643383 25.636023315716262 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 84.0 1 79.0 2 86.0 3 115.0 4 113.0 5 117.0 6 201.0 7 438.5 8 664.0 9 698.5 10 592.5 11 480.5 12 466.0 13 493.0 14 526.5 15 575.0 16 659.5 17 739.0 18 808.5 19 900.0 20 974.5 21 1087.5 22 1302.5 23 1519.0 24 1714.5 25 2093.0 26 2774.5 27 3719.5 28 4959.5 29 6873.5 30 10230.0 31 15074.0 32 22025.0 33 28687.0 34 34685.5 35 42330.5 36 51770.5 37 61055.5 38 69534.5 39 78065.0 40 84701.0 41 90776.5 42 97628.5 43 104960.5 44 111554.5 45 118202.0 46 124066.5 47 129807.5 48 136802.5 49 141076.5 50 141577.5 51 141065.5 52 139371.0 53 137497.5 54 134713.5 55 127405.0 56 117328.5 57 105187.5 58 93033.5 59 79754.5 60 65416.5 61 53763.5 62 43810.5 63 33378.0 64 23576.0 65 16820.5 66 12513.5 67 9356.0 68 6880.5 69 5097.0 70 3762.0 71 2723.0 72 1955.0 73 1463.5 74 1093.0 75 757.0 76 506.5 77 291.0 78 161.5 79 93.0 80 59.0 81 40.0 82 23.5 83 19.0 84 14.5 85 6.0 86 5.0 87 5.0 88 2.5 89 1.5 90 1.0 91 1.5 92 2.0 93 1.5 94 0.5 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.15281383319630476 2 5.17903268617004E-4 3 0.005696935954787045 4 0.00411085719464747 5 0.02518304643650182 6 0.001165282354388259 7 1.6184477144281378E-4 8 0.0018450303944480772 9 0.0 10-11 0.10447079996633629 12-13 2.58951634308502E-4 14-15 0.005502722229055668 16-17 9.710686286568826E-5 18-19 2.751361114527834E-4 20-21 5.502722229055668E-4 22-23 3.3987402002990893E-4 24-25 0.0019097683030252024 26-27 0.0032045264745677125 28-29 0.006295761609125455 30-31 0.015083932698470245 32-33 0.014711689724151772 34-35 0.011814668315325405 36-37 8.739617657911944E-4 38-39 1.9421372573137652E-4 40-41 0.0050171879147272265 42-43 0.008286452297872064 44-45 0.008399743637882035 46-47 0.008852908997921913 48-49 0.010875968640957086 50-51 0.00540561536618998 52-53 0.0016508166687167003 54-55 9.87253105801164E-4 56-57 0.005713120431931326 58-59 0.00953265703798173 60-61 0.007784733506399343 62-63 0.01867688662450071 64-65 0.03512031540309059 66-67 0.037321404294712854 68-69 0.027448873236701216 70-71 0.041982533712265895 72-73 0.026979523399517053 74-75 0.025425813593666042 76-77 0.24425612906149455 78-79 0.07085564093766386 80-81 0.054185629479054045 82-83 0.020683761790391598 84-85 0.03301633337433401 86-87 0.08236280418724792 88-89 0.2646485702632891 90-91 0.32006422000530854 92-93 0.05280994892179013 94-95 0.005211401640458603 96-97 0.010002006875165892 98-99 0.0012138357858211032 100-101 0.001537525328706731 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3089380.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.48467662925059 #Duplication Level Percentage of deduplicated Percentage of total 1 75.82725851063297 42.83078176655694 2 13.04756599669488 14.73975092244232 3 4.553617103794964 7.716287688038497 4 2.1106651619903403 4.768809565905968 5 1.1326967438306712 3.199000464714028 6 0.7348481082324897 2.4904594659077235 7 0.49240499352401107 1.9469335780882402 8 0.3573668341686549 1.6148600052828397 9 0.2615287852975325 1.3295131980094648 >10 1.3909805154399588 13.928456499462541 >50 0.06655499427295875 2.5362013826279783 >100 0.022903243329442494 2.1279541210565105 >500 0.001206756593717844 0.44393754840935634 >1k 4.0225219745362146E-4 0.3270537934975318 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.2368954288562755E-5 2 0.0 0.0 0.0 0.0 6.473790857712551E-5 3 0.0 0.0 0.0 0.0 6.473790857712551E-5 4 0.0 0.0 0.0 0.0 6.473790857712551E-5 5 0.0 0.0 0.0 0.0 6.473790857712551E-5 6 0.0 0.0 0.0 0.0 6.473790857712551E-5 7 0.0 0.0 0.0 0.0 6.473790857712551E-5 8 0.0 0.0 0.0 0.0 6.473790857712551E-5 9 0.0 0.0 0.0 0.0 6.473790857712551E-5 10-11 0.0 0.0 0.0 3.2368954288562755E-5 6.473790857712551E-5 12-13 0.0 0.0 0.0 6.473790857712551E-5 1.4566029429853241E-4 14-15 0.0 0.0 0.0 8.092238572140689E-5 2.2658268001993928E-4 16-17 0.0 0.0 0.0 9.710686286568826E-5 3.560584971741903E-4 18-19 0.0 0.0 0.0 9.710686286568826E-5 4.207964057513158E-4 20-21 0.0 0.0 0.0 1.1329134000996964E-4 4.369808828955972E-4 22-23 0.0 3.2368954288562755E-5 0.0 2.751361114527834E-4 4.5316536003987856E-4 24-25 0.0 6.473790857712551E-5 0.0 4.369808828955972E-4 4.5316536003987856E-4 26-27 1.6184477144281377E-5 6.473790857712551E-5 0.0 9.87253105801164E-4 4.5316536003987856E-4 28-29 3.2368954288562755E-5 6.473790857712551E-5 0.0 0.0037547986974732794 4.693498371841599E-4 30-31 3.2368954288562755E-5 6.473790857712551E-5 0.0 0.013190348872589321 4.855343143284413E-4 32-33 3.2368954288562755E-5 6.473790857712551E-5 0.0 0.03376081932297095 5.502722229055668E-4 34-35 3.2368954288562755E-5 6.473790857712551E-5 0.0 0.06235879043691614 6.473790857712551E-4 36-37 3.2368954288562755E-5 6.473790857712551E-5 0.0 0.10395289669771929 6.473790857712551E-4 38-39 3.2368954288562755E-5 6.473790857712551E-5 0.0 0.16969424285779022 7.121169943483806E-4 40-41 3.2368954288562755E-5 6.473790857712551E-5 0.0 0.2454214114158828 7.444859486369433E-4 42-43 3.2368954288562755E-5 6.473790857712551E-5 0.0 0.3277032932174093 7.444859486369433E-4 44-45 3.2368954288562755E-5 6.473790857712551E-5 0.0 0.43147816066654154 7.444859486369433E-4 46-47 3.2368954288562755E-5 6.473790857712551E-5 0.0 0.5474237549281733 7.768549029255061E-4 48-49 3.2368954288562755E-5 6.473790857712551E-5 0.0 0.6700697227275376 8.739617657911944E-4 50-51 3.2368954288562755E-5 6.473790857712551E-5 0.0 0.8021997941334507 8.739617657911944E-4 52-53 3.2368954288562755E-5 6.473790857712551E-5 0.0 0.941871831888599 8.901462429354757E-4 54-55 3.2368954288562755E-5 6.473790857712551E-5 0.0 1.1081673345460903 9.063307200797571E-4 56-57 3.2368954288562755E-5 6.473790857712551E-5 0.0 1.292913141148062 9.225151972240385E-4 58-59 3.2368954288562755E-5 6.473790857712551E-5 0.0 1.4917070739112703 9.386996743683198E-4 60-61 3.2368954288562755E-5 6.473790857712551E-5 0.0 1.7010694702496942 9.548841515126012E-4 62-63 3.2368954288562755E-5 6.473790857712551E-5 0.0 1.9231690501006675 0.001068175491522571 64-65 3.2368954288562755E-5 6.473790857712551E-5 0.0 2.169577714622352 0.0011005444458111336 66-67 3.2368954288562755E-5 6.473790857712551E-5 0.0 2.455525056807515 0.0011329134000996964 68-69 3.2368954288562755E-5 6.473790857712551E-5 0.0 2.7662184645462844 0.001165282354388259 70-71 3.2368954288562755E-5 6.473790857712551E-5 0.0 3.093403854495077 0.0012138357858211032 72-73 6.473790857712551E-5 6.473790857712551E-5 0.0 3.439525082702678 0.0013918650344081985 74-75 6.473790857712551E-5 6.473790857712551E-5 0.0 3.811120677935379 0.0013918650344081985 76-77 6.473790857712551E-5 6.473790857712551E-5 0.0 4.235348192841282 0.0014242339886967612 78-79 6.473790857712551E-5 6.473790857712551E-5 0.0 4.706251739831293 0.0014242339886967612 80-81 6.473790857712551E-5 6.473790857712551E-5 0.0 5.191899345499745 0.0014727874201296053 82-83 6.473790857712551E-5 6.473790857712551E-5 0.0 5.6995578400844185 0.0015860787601395749 84-85 6.473790857712551E-5 6.473790857712551E-5 0.0 6.240054638794839 0.0015860787601395749 86-87 6.473790857712551E-5 6.473790857712551E-5 0.0 6.81861732774861 0.0016184477144281376 88-89 6.473790857712551E-5 6.473790857712551E-5 0.0 7.44435776757796 0.0016508166687167003 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2870 0.0 54.97792 1 GTATCAA 5325 0.0 41.769413 1 TCAACGC 7025 0.0 31.213089 4 CAACGCA 7085 0.0 30.806145 5 TATCAAC 7190 0.0 30.694824 2 ATCAACG 7210 0.0 30.543854 3 AACGCAG 7635 0.0 28.647392 6 GTACATG 11385 0.0 26.966936 1 TACATGG 11975 0.0 25.246723 2 ACATGGG 12375 0.0 23.932081 3 ACGCAGA 9185 0.0 23.347141 7 TATACCG 245 2.9467628E-10 23.290548 5 CGCAGAG 9630 0.0 22.0214 8 CATGGGG 10230 0.0 21.99094 4 ATGGGGG 6555 0.0 20.892206 5 GTATAGG 850 0.0 18.451307 1 GCAGAGT 11010 0.0 18.224745 9 GTGGTAT 1760 0.0 18.09232 1 GAGTACA 9085 0.0 18.047884 1 AGAGTAC 9550 0.0 17.30166 10-11 >>END_MODULE