##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921408_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3149648 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.479406905152576 33.0 31.0 34.0 30.0 34.0 2 31.61313930953554 34.0 31.0 34.0 29.0 34.0 3 31.687894329779073 34.0 31.0 34.0 29.0 34.0 4 35.18437774633864 37.0 35.0 37.0 33.0 37.0 5 34.93515370606493 37.0 35.0 37.0 32.0 37.0 6 34.88907331866926 37.0 35.0 37.0 32.0 37.0 7 34.760494823548534 37.0 35.0 37.0 32.0 37.0 8 34.722860141831724 37.0 35.0 37.0 32.0 37.0 9 36.35312231716052 39.0 37.0 39.0 32.0 39.0 10-11 36.20425584065267 39.0 37.0 39.0 32.0 39.0 12-13 36.13687132657363 39.0 37.0 39.0 32.0 39.0 14-15 37.38838498778276 40.0 38.0 41.0 32.0 41.0 16-17 37.36931841272421 40.0 38.0 41.0 32.0 41.0 18-19 37.33257621169096 40.0 38.0 41.0 31.5 41.0 20-21 37.29752880321865 40.0 38.0 41.0 31.0 41.0 22-23 37.19330604562795 40.0 38.0 41.0 31.0 41.0 24-25 37.12659049519185 40.0 37.5 41.0 31.0 41.0 26-27 36.98934150736844 40.0 37.0 41.0 30.5 41.0 28-29 36.83840543451205 40.0 37.0 41.0 30.0 41.0 30-31 36.70065353334722 40.0 37.0 41.0 30.0 41.0 32-33 36.65073081182405 40.0 37.0 41.0 30.0 41.0 34-35 36.78397268520165 40.0 37.0 41.0 30.0 41.0 36-37 36.75584478011511 40.0 37.0 41.0 30.0 41.0 38-39 36.66955545508577 40.0 37.0 41.0 30.0 41.0 40-41 36.550828219534374 40.0 37.0 41.0 30.0 41.0 42-43 36.45259057520079 40.0 37.0 41.0 30.0 41.0 44-45 36.32186310978243 40.0 36.0 41.0 29.5 41.0 46-47 36.16715105941998 40.0 36.0 41.0 28.5 41.0 48-49 36.0146097278172 40.0 36.0 41.0 28.0 41.0 50-51 35.865439566580136 40.0 35.0 41.0 28.0 41.0 52-53 35.70186223984395 39.5 35.0 41.0 28.0 41.0 54-55 35.49857857131971 39.0 35.0 41.0 27.0 41.0 56-57 35.241905920915606 39.0 35.0 41.0 26.5 41.0 58-59 35.02608005720005 39.0 35.0 41.0 26.0 41.0 60-61 34.75442795512387 38.0 35.0 40.0 26.0 41.0 62-63 34.46310270227022 37.5 34.0 40.0 26.0 41.0 64-65 34.15657130574591 37.0 34.0 40.0 26.0 41.0 66-67 33.82175008127892 36.5 34.0 39.5 25.0 41.0 68-69 33.455014655605964 36.0 34.0 39.0 24.0 41.0 70-71 33.07335914997485 35.5 33.5 39.0 23.5 40.0 72-73 32.67505194231228 35.0 33.0 38.0 22.0 40.0 74-75 32.26292207891167 35.0 33.0 37.0 21.5 39.0 76-77 29.487775776848714 33.0 29.0 34.5 15.0 36.5 78-79 31.144930798616226 34.5 31.5 36.0 19.0 38.0 80-81 31.336795572076625 35.0 32.0 36.0 20.0 37.0 82-83 31.16699104153861 35.0 32.0 35.0 19.5 37.0 84-85 30.934515857010055 35.0 32.0 35.0 18.0 36.5 86-87 30.684951302494753 35.0 32.0 35.0 16.0 36.0 88-89 30.402603719526752 35.0 32.0 35.0 10.0 36.0 90-91 30.216182728990667 35.0 32.0 35.0 4.5 35.5 92-93 30.068540357525666 34.0 32.0 35.0 2.0 35.0 94-95 29.972401995397583 34.0 31.5 35.0 2.0 35.0 96-97 29.787513715818402 34.0 31.0 35.0 2.0 35.0 98-99 29.53336626823061 34.0 31.0 35.0 2.0 35.0 100-101 28.449097803945076 33.5 29.0 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 53206.0 3 18350.0 4 10328.0 5 7068.0 6 6230.0 7 6091.0 8 6721.0 9 7228.0 10 8074.0 11 8626.0 12 9455.0 13 10259.0 14 11312.0 15 12307.0 16 13496.0 17 14664.0 18 13510.0 19 11978.0 20 11546.0 21 11447.0 22 12079.0 23 13656.0 24 16107.0 25 19193.0 26 22918.0 27 27404.0 28 33005.0 29 40081.0 30 49000.0 31 60042.0 32 76821.0 33 101842.0 34 147792.0 35 218953.0 36 377001.0 37 742655.0 38 827792.0 39 111409.0 40 2.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.59917769276999 19.757091843386405 13.71761728053523 25.92611318330837 2 15.072476652056507 21.109747637424654 37.75704168895761 26.060734021561228 3 17.719957122427154 24.794851897103985 29.4918258276413 27.99336515282756 4 13.125191895965477 16.982003135107778 35.6126525761448 34.28015239278195 5 14.08425252765205 37.55711750485587 34.278950651238006 14.079679316254081 6 33.36372858269979 35.614448115087086 17.033319945453652 13.988503356759477 7 28.546024364000154 32.1032483957726 21.080267090248526 18.270460149978714 8 26.580459085847853 35.144448180360286 19.87508282779407 18.4000099059978 9 26.717715757443372 15.544530690413657 19.343304394649817 38.394449157493156 10-11 25.520791535436167 25.594607449511585 27.888287996801363 20.996313018250888 12-13 26.03848244436514 22.897444917584338 27.692447146407655 23.371625491642863 14-15 23.194174888294608 24.611589101967237 24.966283982927273 27.227952026810883 16-17 23.479113830007456 27.660427654680973 25.76768993575147 23.0927685795601 18-19 23.455660070195357 27.07474206960577 27.07229734460002 22.397300515598854 20-21 23.919245727036422 26.15425499320714 27.081173687440646 22.845325592315792 22-23 23.837173953179143 25.859990186190913 26.712943861741813 23.58989199888813 24-25 23.63887275370606 26.145060435365775 26.6941293740214 23.52193743690676 26-27 23.354736821551043 26.41088950551735 26.748523486342318 23.48585018658929 28-29 23.408202656787246 26.77927493845737 26.514577339548612 23.29794506520677 30-31 23.9473850502718 26.272227604574017 26.411263753972857 23.369123591181324 32-33 23.641437405491093 26.292688177915856 26.265538201445835 23.80033621514721 34-35 23.86141867797934 26.47854899706916 26.402070956126337 23.257961368825157 36-37 23.870974706398098 26.308276478780606 26.5193329820752 23.301415832746095 38-39 23.75258005594923 26.429202566260727 26.42912319213523 23.38909418565481 40-41 23.96915502073906 26.217486219600843 26.406738992627858 23.406619767032232 42-43 23.696073304330902 26.263950713010864 26.199811328602895 23.84016465405534 44-45 23.61653323866947 26.25353679713748 26.39454827587192 23.73538168832113 46-47 23.76600246780455 26.19879988238873 26.215136545289546 23.820061104517173 48-49 23.5114730694684 26.401602520950767 26.316091129169518 23.770833280411317 50-51 23.676735572549624 26.33772720128657 26.348141668505605 23.637395557658206 52-53 23.95113285002336 26.171144562619926 26.22143665522024 23.656285932136473 54-55 23.294947178489824 26.052695621832058 26.62817838298726 24.02417881669086 56-57 23.42933119540239 26.14763630301996 26.382771663418758 24.040260838158893 58-59 23.501568722956954 26.19313280055071 26.43318027660709 23.872118199885247 60-61 23.659104013940325 26.246751786993432 26.48881192243407 23.605332276632172 62-63 23.57945902964737 26.19973058815236 26.457123059990177 23.763687322210092 64-65 23.289243150374396 25.967653083472907 26.513930307412743 24.22917345873995 66-67 23.333198348098335 26.22221586997587 26.26082164718512 24.183764134740674 68-69 23.381481683201567 26.10309908920558 26.39349132673906 24.12192790085379 70-71 23.315087589575104 25.905303494102018 26.349178973292993 24.430429943029893 72-73 23.23230574973419 26.18791594206949 26.191441009426857 24.388337298769468 74-75 23.25329442008838 26.20780053892092 26.16616675426381 24.37273828672689 76-77 23.195282505299417 25.847735497199874 26.33841185083248 24.61857014666823 78-79 23.100414330280426 25.862298486190106 26.42298352750399 24.614303656025484 80-81 23.322165346351603 25.97903866154424 26.16004327846439 24.53875271363977 82-83 23.192819865977437 26.05437497737393 26.271855198217096 24.480949958431538 84-85 23.146449457254363 26.031845544772686 26.187419340854294 24.634285657118657 86-87 22.968446800147817 26.165566362826688 26.143610066342333 24.722376770683166 88-89 22.843954369040826 25.977692578029497 26.227137407301772 24.951215645627904 90-91 22.921516870707674 25.791738827510702 26.33555091071962 24.95119339106201 92-93 23.017535801182035 25.63738357657156 26.392502903785857 24.95257771846055 94-95 22.84947632072385 25.606982326846417 26.41063510350629 25.132906248923437 96-97 22.639470073178813 25.46860207716504 26.48370349284239 25.40822435681375 98-99 22.356965193874302 25.453023192018843 26.44422275971245 25.74578885439441 100-101 22.476903067097428 25.482262625505758 26.40818781647803 25.632646490918788 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 81.0 1 74.0 2 81.5 3 106.0 4 102.5 5 106.5 6 181.0 7 387.5 8 583.5 9 619.5 10 529.0 11 439.5 12 443.5 13 469.0 14 506.0 15 567.5 16 622.0 17 696.5 18 802.0 19 864.0 20 983.0 21 1153.0 22 1301.5 23 1637.0 24 2126.0 25 2701.5 26 3686.0 27 5364.5 28 7608.0 29 10888.5 30 15631.5 31 22056.5 32 30563.5 33 37127.0 34 42220.0 35 49300.5 36 58560.5 37 67764.0 38 75878.0 39 83815.5 40 90316.5 41 97268.0 42 104174.5 43 110415.0 44 116719.5 45 124793.5 46 131264.0 47 135105.5 48 139432.0 49 141195.0 50 140565.5 51 138957.0 52 136279.5 53 133250.0 54 128804.0 55 120349.0 56 109790.5 57 98555.0 58 87656.0 59 75179.5 60 60714.0 61 49546.5 62 40684.5 63 30780.0 64 21516.5 65 15198.5 66 11319.0 67 8719.5 68 6461.0 69 4731.0 70 3486.5 71 2468.5 72 1663.5 73 1162.0 74 879.5 75 631.0 76 423.5 77 252.0 78 141.0 79 75.0 80 42.0 81 26.0 82 19.5 83 10.0 84 6.0 85 7.0 86 6.5 87 6.5 88 6.0 89 1.5 90 0.5 91 2.5 92 3.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.1536044662768665 2 4.1274453526235315E-4 3 0.0068579092012821755 4 0.004921184843512672 5 0.027812631760755484 6 0.0010477361279736656 7 3.174957963556562E-5 8 0.0013017327650581905 9 0.0 10-11 0.10501173464463331 12-13 1.269983185422625E-4 14-15 0.0057307991242195955 16-17 1.269983185422625E-4 18-19 3.0162100653787345E-4 20-21 6.032420130757469E-4 22-23 1.4287310836004531E-4 24-25 0.0013811067141471047 26-27 0.0026510898995697296 28-29 0.006508663825290953 30-31 0.014827053689809145 32-33 0.015049300747258106 34-35 0.012001341102243806 36-37 5.556176436223984E-4 38-39 2.2224705744895937E-4 40-41 0.004968809212966021 42-43 0.008159641966340366 44-45 0.008223141125611497 46-47 0.009207378094314031 48-49 0.011429848668803625 50-51 0.0058101730733085095 52-53 0.0015081050326893673 54-55 0.0010001117585203172 56-57 0.0058895470223974235 58-59 0.008604136081238285 60-61 0.0071119058383667 62-63 0.017970262073730144 64-65 0.03376567794242404 66-67 0.03668663926889608 68-69 0.02551078723717698 70-71 0.039448852697190284 72-73 0.024510675478656662 74-75 0.024224929261936572 76-77 0.23991569851615166 78-79 0.06854734243318619 80-81 0.05276780135431007 82-83 0.019875236851864084 84-85 0.031162212412307662 86-87 0.07896120455365171 88-89 0.26263252274539883 90-91 0.31624168796005137 92-93 0.05087870136599392 94-95 0.004873560474059324 96-97 0.00976299573793643 98-99 9.524873890669688E-4 100-101 0.0013176075548759734 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3149648.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.899998188954754 #Duplication Level Percentage of deduplicated Percentage of total 1 77.59844893665743 46.481469507714785 2 12.56096690980171 15.04803790297286 3 4.115402137833229 7.395377418090927 4 1.8473039762495738 4.4261401932719355 5 1.0345602565582266 3.0985078747101165 6 0.6341044737672856 2.2789714098161107 7 0.4393282000711731 1.8421030872034017 8 0.29683766558973773 1.4224460504991077 9 0.22763333842819675 1.227171290363524 >10 1.1802937430888398 12.22407704965302 >50 0.0481258750015861 1.9349370510455703 >100 0.015240836893877778 1.6245336933409393 >500 0.0011159591288906194 0.495965115997749 >1k 6.376909302622914E-4 0.5002623553199366 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.174957963556562E-5 2 0.0 0.0 0.0 0.0 3.174957963556562E-5 3 0.0 0.0 0.0 0.0 3.174957963556562E-5 4 0.0 0.0 0.0 3.174957963556562E-5 3.174957963556562E-5 5 0.0 3.174957963556562E-5 0.0 3.174957963556562E-5 3.174957963556562E-5 6 0.0 3.174957963556562E-5 0.0 3.174957963556562E-5 6.349915927113125E-5 7 0.0 3.174957963556562E-5 0.0 3.174957963556562E-5 6.349915927113125E-5 8 0.0 3.174957963556562E-5 0.0 3.174957963556562E-5 6.349915927113125E-5 9 0.0 3.174957963556562E-5 0.0 3.174957963556562E-5 6.349915927113125E-5 10-11 0.0 3.174957963556562E-5 0.0 6.349915927113125E-5 7.937394908891405E-5 12-13 0.0 3.174957963556562E-5 0.0 9.524873890669688E-5 1.1112352872447968E-4 14-15 0.0 3.174957963556562E-5 0.0 9.524873890669688E-5 1.5874789817782814E-4 16-17 0.0 3.174957963556562E-5 0.0 1.1112352872447968E-4 1.5874789817782814E-4 18-19 0.0 3.174957963556562E-5 0.0 1.4287310836004531E-4 1.5874789817782814E-4 20-21 0.0 6.349915927113125E-5 0.0 2.222470574489594E-4 1.5874789817782814E-4 22-23 0.0 6.349915927113125E-5 0.0 3.4924537599122186E-4 2.222470574489594E-4 24-25 0.0 6.349915927113125E-5 0.0 5.873672232579641E-4 2.8574621672009063E-4 26-27 0.0 6.349915927113125E-5 0.0 0.0010477361279736656 2.8574621672009063E-4 28-29 0.0 6.349915927113125E-5 0.0 0.0035877024988189158 2.8574621672009063E-4 30-31 0.0 6.349915927113125E-5 0.0 0.013747567982199914 2.8574621672009063E-4 32-33 0.0 6.349915927113125E-5 0.0 0.037464503969967436 2.8574621672009063E-4 34-35 0.0 6.349915927113125E-5 0.0 0.06981732561860882 2.8574621672009063E-4 36-37 0.0 6.349915927113125E-5 0.0 0.119505417748269 3.1749579635565627E-4 38-39 0.0 6.349915927113125E-5 0.0 0.19648227357469789 3.1749579635565627E-4 40-41 0.0 7.937394908891405E-5 0.0 0.28130127557111145 3.1749579635565627E-4 42-43 0.0 9.524873890669688E-5 0.0 0.37364492794115406 3.1749579635565627E-4 44-45 0.0 9.524873890669688E-5 0.0 0.4885942810117194 3.1749579635565627E-4 46-47 0.0 9.524873890669688E-5 0.0 0.6241649860555846 3.1749579635565627E-4 48-49 0.0 9.524873890669688E-5 0.0 0.7601166860550765 3.1749579635565627E-4 50-51 0.0 9.524873890669688E-5 0.0 0.9030056692049397 3.1749579635565627E-4 52-53 0.0 9.524873890669688E-5 0.0 1.0539590455822365 3.3337058617343904E-4 54-55 0.0 1.269983185422625E-4 0.0 1.2341855343835246 3.809949556267875E-4 56-57 0.0 1.269983185422625E-4 0.0 1.4418912843593952 3.809949556267875E-4 58-59 0.0 1.269983185422625E-4 0.0 1.6558834511031075 3.968697454445703E-4 60-61 0.0 1.269983185422625E-4 0.0 1.8776383900677156 4.1274453526235315E-4 62-63 0.0 1.269983185422625E-4 0.0 2.110235810477869 4.1274453526235315E-4 64-65 0.0 1.5874789817782814E-4 0.0 2.3695187525717163 4.1274453526235315E-4 66-67 0.0 1.5874789817782814E-4 0.0 2.677680172514516 4.1274453526235315E-4 68-69 0.0 1.5874789817782814E-4 0.0 3.008336169629114 4.4449411489791874E-4 70-71 0.0 1.5874789817782814E-4 0.0 3.3487234129020136 5.238680639868328E-4 72-73 0.0 1.5874789817782814E-4 0.0 3.7038424611258147 5.397428538046156E-4 74-75 0.0 1.5874789817782814E-4 0.0 4.082218076432667 5.714924334401813E-4 76-77 0.0 1.5874789817782814E-4 0.0 4.522378373710332 6.032420130757469E-4 78-79 0.0 1.5874789817782814E-4 0.0 5.007353202643597 6.032420130757469E-4 80-81 1.587478981778281E-5 1.5874789817782814E-4 3.174957963556562E-5 5.505551731495075 6.191168028935297E-4 82-83 3.174957963556562E-5 1.5874789817782814E-4 3.174957963556562E-5 6.023736620727142 6.349915927113125E-4 84-85 3.174957963556562E-5 1.5874789817782814E-4 3.174957963556562E-5 6.577258792093593 6.349915927113125E-4 86-87 3.174957963556562E-5 1.9049747781339375E-4 3.174957963556562E-5 7.174944628733115 6.349915927113125E-4 88-89 3.174957963556562E-5 1.9049747781339375E-4 3.174957963556562E-5 7.823906036484077 6.349915927113125E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2630 0.0 48.619587 1 GTATCAA 4640 0.0 43.94951 1 TCAACGC 5915 0.0 33.379807 4 CAACGCA 6125 0.0 32.295876 5 TATCAAC 6185 0.0 32.22959 2 ATCAACG 6130 0.0 32.20906 3 AACGCAG 6500 0.0 30.503864 6 GTACATG 8495 0.0 24.84473 1 ACGCAGA 8000 0.0 24.19004 7 CGCAGAG 8200 0.0 23.542055 8 TACATGG 8990 0.0 22.754263 2 ACATGGG 8915 0.0 22.36007 3 CATGGGG 7590 0.0 20.760677 4 GCAGAGT 9245 0.0 19.749517 9 AGAGTAC 7840 0.0 18.497625 10-11 ATGGGGG 5015 0.0 18.204977 5 TAAGGTG 1415 0.0 17.474579 5 CAGAGTA 8770 0.0 16.752941 10-11 AGTACAC 3020 0.0 16.501657 3 GAGTACT 4205 0.0 16.473814 12-13 >>END_MODULE