##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921407_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3054828 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.58243017282806 31.0 31.0 34.0 27.0 34.0 2 30.637615603889973 33.0 31.0 34.0 27.0 34.0 3 30.68889279527358 33.0 31.0 34.0 27.0 34.0 4 34.165152997157286 37.0 35.0 37.0 30.0 37.0 5 34.163210498267006 37.0 35.0 37.0 30.0 37.0 6 34.20814756182672 37.0 35.0 37.0 30.0 37.0 7 34.13299766795381 37.0 35.0 37.0 30.0 37.0 8 34.105375818213005 37.0 35.0 37.0 30.0 37.0 9 35.6747014889218 39.0 37.0 39.0 30.0 39.0 10-11 35.57462171356292 39.0 37.0 39.0 30.0 39.0 12-13 35.46795809780453 39.0 36.0 39.0 30.0 39.0 14-15 36.61486244070043 40.0 37.0 41.0 30.0 41.0 16-17 36.56097593710677 40.0 37.0 41.0 30.0 41.0 18-19 36.51564670744146 40.0 37.0 41.0 29.0 41.0 20-21 36.456836358708244 40.0 37.0 41.0 29.0 41.0 22-23 36.34176064904473 40.0 37.0 41.0 28.5 41.0 24-25 36.24886163803657 40.0 36.0 41.0 28.0 41.0 26-27 36.10491589051823 40.0 36.0 41.0 27.0 41.0 28-29 35.969960829218536 40.0 36.0 41.0 27.0 41.0 30-31 35.82980203795435 40.0 36.0 41.0 27.0 41.0 32-33 35.65792247550435 39.5 35.5 41.0 26.5 41.0 34-35 35.49879060294066 39.0 35.0 41.0 25.5 41.0 36-37 35.33484176523196 39.0 35.0 41.0 25.0 41.0 38-39 35.569864980941645 39.5 35.0 41.0 26.5 41.0 40-41 35.696080597663766 40.0 35.5 41.0 26.5 41.0 42-43 35.54446878842279 40.0 35.0 41.0 25.5 41.0 44-45 35.43645354173786 40.0 35.0 41.0 25.0 41.0 46-47 35.29546164301231 40.0 35.0 41.0 24.5 41.0 48-49 35.160458133813094 40.0 35.0 41.0 24.0 41.0 50-51 33.44615114173368 37.0 32.5 39.5 21.5 40.0 52-53 33.61128744400666 37.5 33.5 39.5 22.0 40.0 54-55 34.48935930271688 39.0 34.0 40.5 22.5 41.0 56-57 34.51488496242669 39.0 34.0 41.0 22.0 41.0 58-59 34.34793137289563 38.5 34.0 41.0 22.0 41.0 60-61 34.113311289539055 38.0 34.0 40.5 22.0 41.0 62-63 33.832416751450495 37.5 34.0 40.0 20.5 41.0 64-65 33.54831875968139 37.0 34.0 40.0 20.0 41.0 66-67 33.213066333030866 36.5 33.5 39.5 18.5 41.0 68-69 32.84620754425454 36.0 33.0 39.0 17.5 41.0 70-71 32.463751314312944 35.5 33.0 39.0 14.0 41.0 72-73 32.09841879804689 35.0 33.0 38.5 11.5 40.0 74-75 31.68758535668784 35.0 32.0 37.0 7.5 39.5 76-77 31.302617856062597 35.0 32.0 37.0 4.5 39.0 78-79 30.946595192920846 35.0 32.0 36.0 2.0 39.0 80-81 30.586988367266503 35.0 31.5 36.0 2.0 37.0 82-83 30.28120814003276 35.0 31.0 35.5 2.0 37.0 84-85 30.038095598180977 35.0 31.0 35.0 2.0 36.5 86-87 29.80611707107569 35.0 31.0 35.0 2.0 36.0 88-89 29.596622952257867 35.0 31.0 35.0 2.0 36.0 90-91 29.337116525054768 35.0 31.0 35.0 2.0 36.0 92-93 29.14166280392873 34.5 31.0 35.0 2.0 35.0 94-95 28.930810016144935 34.0 30.0 35.0 2.0 35.0 96-97 28.678027862779835 34.0 30.0 35.0 2.0 35.0 98-99 28.44952956434863 34.0 30.0 35.0 2.0 35.0 100-101 27.395660737691287 33.5 27.5 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 90221.0 3 15628.0 4 11056.0 5 8417.0 6 7748.0 7 7971.0 8 8582.0 9 9103.0 10 9983.0 11 10693.0 12 11174.0 13 11425.0 14 11978.0 15 13003.0 16 13178.0 17 13662.0 18 13046.0 19 12081.0 20 12671.0 21 13094.0 22 14837.0 23 16433.0 24 19450.0 25 22869.0 26 27341.0 27 32453.0 28 38593.0 29 45189.0 30 54443.0 31 66189.0 32 82211.0 33 106928.0 34 150139.0 35 216680.0 36 353472.0 37 645961.0 38 722733.0 39 134178.0 40 15.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.32514985788802 18.089096581779405 12.733711818253873 24.852041742078708 2 16.059854490855564 19.60537883343749 39.10430513684227 25.230461538864674 3 19.33301018252562 23.592541766696034 29.42579594991599 27.648652100862353 4 13.71704343941142 15.548008964197582 36.35776738811294 34.37718020827806 5 14.42637758823354 37.20614065684578 34.20652286763553 14.160958887285155 6 33.726876256458276 34.815926816011945 17.18546797545691 14.27172895207287 7 29.148375538256833 31.811273534003163 20.77900562615902 18.261345301580985 8 26.770076231101847 34.837731415844885 19.916676871414285 18.475515481638986 9 27.047467246777884 15.6531146216251 19.418216727726122 37.8812014038709 10-11 25.774154531637084 25.19516349465277 27.807990292412903 21.222691681297242 12-13 26.118282080341125 22.650424718794277 27.621702457478186 23.609590743386413 14-15 23.45583086779358 24.350155333917158 24.78751708738589 27.406496710903372 16-17 23.682847290282293 27.407078014551328 25.66742166274433 23.242653032422044 18-19 23.676552470572364 26.917582974398503 26.88285870003515 22.523005854993986 20-21 24.09876660442523 26.07457348514678 26.872961156266395 22.953698754161593 22-23 24.007673651993496 25.858897162255328 26.523996128785036 23.60943305696614 24-25 23.782511407188103 25.960574072421416 26.56562786817196 23.691286652218515 26-27 23.581234454059988 26.274668844462667 26.553398789463273 23.590697912014072 28-29 23.69443875108783 26.56032167719519 26.339628621438642 23.405610950278337 30-31 24.127816373434257 26.13028162097392 26.288280088788195 23.453621916803623 32-33 23.766968970184113 26.137975987266195 26.29498786399026 23.800067178559434 34-35 24.01875224561251 26.234745180782546 26.35967285057541 23.38682972302953 36-37 23.97115475267646 26.18622134985649 26.416466761643377 23.42615713582368 38-39 23.956620092711418 26.28347366629128 26.349291569546658 23.410614671450645 40-41 24.01302048892142 26.065104408778012 26.373888442949344 23.54798665935122 42-43 23.77369670773292 26.076574254742457 26.226467342927233 23.923261694597386 44-45 23.74532375752586 26.1059057190794 26.38306072677952 23.765709796615226 46-47 23.784780568101542 26.05914839058453 26.207650015097826 23.948421026216096 48-49 23.66125003628782 26.20100385643177 26.290029976610143 23.847716130670268 50-51 23.728827736462733 26.127343642240263 26.43112307364035 23.712705547656647 52-53 23.865672608762328 26.015668631327916 26.379509570035236 23.739149189874517 54-55 23.434014142790552 25.90332752825261 26.63710328987013 24.025555039086704 56-57 23.553927169111297 26.057369018223714 26.360619176885862 24.028084635779123 58-59 23.664934759887384 26.024824507476023 26.533521548887602 23.77671918374899 60-61 23.774376121706357 25.923131219365043 26.62337289526016 23.679119763668435 62-63 23.68118326442604 25.952294444795292 26.6344725659841 23.73204972479457 64-65 23.436252566938894 25.753407535002147 26.650644845232385 24.159695052826574 66-67 23.47503059730599 25.932475657468938 26.439172293257833 24.153321451967233 68-69 23.466567863863382 25.890992494168845 26.546659968282725 24.095779673685044 70-71 23.420329411286254 25.695303661424536 26.60263679239946 24.281730134889752 72-73 23.39274325105095 25.883174289336804 26.45641819482782 24.267664264784433 74-75 23.32072619975774 25.928634942959583 26.52357334993438 24.227065507348293 76-77 23.326547724727433 25.56568376746086 26.637348551726557 24.470419956085145 78-79 23.220264414015247 25.580285975532334 26.760017887004135 24.439431723448283 80-81 23.306016101603433 25.73270760828159 26.53022487581908 24.43105141429589 82-83 23.34760315407059 25.79242619489584 26.63093059519015 24.229040055843424 84-85 23.341251761222733 25.714221033883884 26.59643593644063 24.34809126845275 86-87 23.119865091597724 25.84336619959106 26.640931075365533 24.39583763344568 88-89 23.074812877567293 25.505058294257203 26.79680193734475 24.623326890830754 90-91 23.23303337467356 25.335035507258386 26.861922269760658 24.570008848307396 92-93 23.244731906850365 25.297265989686135 26.934669574106067 24.523332529357425 94-95 23.15323203674665 25.25081833893114 26.90259288893498 24.693356735387226 96-97 23.040009294336066 25.10087734988023 26.988658087565643 24.870455268218063 98-99 22.866471402738497 25.03161375611458 27.005030799928527 25.0968840412184 100-101 23.011621570309245 25.01409970530508 27.053006523195634 24.921272201190035 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 83.0 1 64.5 2 87.0 3 136.0 4 132.5 5 155.5 6 240.0 7 393.5 8 602.5 9 713.5 10 642.0 11 557.5 12 597.0 13 667.5 14 735.5 15 863.0 16 949.0 17 1019.0 18 1167.5 19 1270.5 20 1369.5 21 1529.5 22 1641.0 23 1830.5 24 2134.0 25 2572.0 26 3369.5 27 4529.0 28 6375.5 29 9285.5 30 13354.0 31 19111.5 32 26755.5 33 33818.0 34 40403.5 35 47843.0 36 56897.5 37 66257.0 38 74606.5 39 82054.5 40 88578.5 41 95444.5 42 102481.5 43 109507.5 44 116054.5 45 123174.5 46 127566.0 47 130284.0 48 133824.0 49 135282.5 50 134786.0 51 132312.0 52 129346.5 53 125586.5 54 120235.5 55 113309.5 56 104556.0 57 94092.0 58 83372.0 59 72109.0 60 59544.0 61 48485.5 62 39430.5 63 30712.0 64 22754.0 65 16851.5 66 12928.0 67 10338.5 68 8221.5 69 6445.5 70 4983.0 71 3814.5 72 2849.5 73 2128.5 74 1667.5 75 1333.0 76 1039.5 77 713.0 78 474.5 79 337.0 80 225.5 81 165.5 82 139.5 83 99.0 84 69.5 85 59.0 86 55.5 87 43.5 88 36.0 89 33.0 90 32.5 91 32.0 92 23.0 93 16.0 94 9.5 95 11.5 96 12.0 97 10.5 98 11.5 99 11.0 100 6.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.052441577725488964 2 0.05970876265374024 3 0.05100123476673645 4 0.05872671063640899 5 0.05037926848909333 6 0.019902920884580084 7 0.01715317523605257 8 0.022718136667596343 9 0.022947282138306966 10-11 0.023634718550438846 12-13 0.030279937201047 14-15 0.04602550454559144 16-17 0.031065578814912002 18-19 0.02515689917730229 20-21 0.028168525363784804 22-23 0.04985550741318333 24-25 0.04519076033085987 26-27 0.031949425630510134 28-29 0.019182749405203828 30-31 0.01204650474593005 32-33 0.009231288962913788 34-35 0.008527485017159723 36-37 0.0014403429587525058 38-39 0.0061541926419425245 40-41 0.003404446993415014 42-43 0.2287853849709378 44-45 0.2020735700995277 46-47 0.20873515628375802 48-49 0.2057235300972755 50-51 0.20408677673505676 52-53 0.20886609655273555 54-55 0.20783494193453772 56-57 0.21881755699502559 58-59 0.2144146904506571 60-61 0.22055251555897745 62-63 0.21770456470871685 64-65 0.21911217260022495 66-67 0.20809682247249273 68-69 0.20726207825776116 70-71 0.18929052634059923 72-73 0.19767070355515923 74-75 0.1972287801473602 76-77 0.19554292418427488 78-79 0.22276213259797278 80-81 0.23101136954355533 82-83 0.22981653958913562 84-85 0.22503721977145688 86-87 0.2431233444239741 88-89 0.24086462478411222 90-91 0.24068458191426814 92-93 0.24462915751721537 94-95 0.2553989946406148 96-97 0.25569361024581416 98-99 0.24549663679919131 100-101 0.254629720560372 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3054828.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 63.35567272662487 #Duplication Level Percentage of deduplicated Percentage of total 1 79.3163169312539 50.25138617377777 2 11.906755606526614 15.08721022886012 3 3.7989934362786304 7.220633545183946 4 1.6622027003292041 4.212398811494767 5 0.8922044869320414 2.826310773964633 6 0.5512136501760014 2.0953506973799425 7 0.3788459984953571 1.6801430166124283 8 0.26871170455688953 1.3619528649375845 9 0.20515659490447144 1.1698050676028802 >10 0.9627560351164383 10.415574034508268 >50 0.04310383285669465 1.8533224619147086 >100 0.012806959966917398 1.361964737660201 >500 8.285000950623082E-4 0.36956367967525305 >1k 1.0356251181508436E-4 0.09438390642729381 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 3.273506724437513E-5 5 0.0 6.547013448875026E-5 0.0 0.0 3.273506724437513E-5 6 3.273506724437513E-5 6.547013448875026E-5 0.0 0.0 3.273506724437513E-5 7 3.273506724437513E-5 6.547013448875026E-5 0.0 0.0 3.273506724437513E-5 8 3.273506724437513E-5 6.547013448875026E-5 0.0 0.0 3.273506724437513E-5 9 3.273506724437513E-5 6.547013448875026E-5 0.0 3.273506724437513E-5 3.273506724437513E-5 10-11 6.547013448875026E-5 6.547013448875026E-5 0.0 3.273506724437513E-5 3.273506724437513E-5 12-13 6.547013448875026E-5 6.547013448875026E-5 0.0 6.547013448875026E-5 3.273506724437513E-5 14-15 6.547013448875026E-5 6.547013448875026E-5 0.0 6.547013448875026E-5 3.273506724437513E-5 16-17 6.547013448875026E-5 6.547013448875026E-5 0.0 1.1457273535531298E-4 3.273506724437513E-5 18-19 6.547013448875026E-5 9.82052017331254E-5 0.0 1.6367533622187568E-4 3.273506724437513E-5 20-21 6.547013448875026E-5 1.3094026897750053E-4 0.0 2.1277793708843835E-4 3.273506724437513E-5 22-23 6.547013448875026E-5 1.3094026897750053E-4 0.0 2.6188053795500105E-4 9.82052017331254E-5 24-25 6.547013448875026E-5 1.3094026897750053E-4 0.0 5.728636767765648E-4 1.6367533622187568E-4 26-27 6.547013448875026E-5 1.3094026897750053E-4 0.0 9.493169500868788E-4 1.6367533622187568E-4 28-29 6.547013448875026E-5 1.3094026897750053E-4 0.0 0.003764532733103141 1.6367533622187568E-4 30-31 6.547013448875026E-5 1.3094026897750053E-4 0.0 0.016531208958409444 1.6367533622187568E-4 32-33 6.547013448875026E-5 1.3094026897750053E-4 0.0 0.04334122903155267 1.964104034662508E-4 34-35 6.547013448875026E-5 1.3094026897750053E-4 0.0 0.08170672784196034 1.964104034662508E-4 36-37 6.547013448875026E-5 1.3094026897750053E-4 0.0 0.14064621641545777 1.964104034662508E-4 38-39 6.547013448875026E-5 1.3094026897750053E-4 0.0 0.23156786568670967 1.964104034662508E-4 40-41 9.82052017331254E-5 1.3094026897750053E-4 0.0 0.3307387519035442 1.964104034662508E-4 42-43 9.82052017331254E-5 1.3094026897750053E-4 0.0 0.4395992180247137 1.964104034662508E-4 44-45 9.82052017331254E-5 1.3094026897750053E-4 0.0 0.5757934652949364 1.964104034662508E-4 46-47 9.82052017331254E-5 1.3094026897750053E-4 0.0 0.7299265294150767 2.2914547071062593E-4 48-49 9.82052017331254E-5 1.3094026897750053E-4 0.0 0.8841741662705724 2.2914547071062593E-4 50-51 9.82052017331254E-5 1.3094026897750053E-4 0.0 1.0463436893992069 2.2914547071062593E-4 52-53 9.82052017331254E-5 1.3094026897750053E-4 0.0 1.218792023642575 2.455130043328135E-4 54-55 9.82052017331254E-5 1.3094026897750053E-4 0.0 1.4249574771476496 2.6188053795500105E-4 56-57 9.82052017331254E-5 1.3094026897750053E-4 0.0 1.659471498886353 2.6188053795500105E-4 58-59 9.82052017331254E-5 1.3094026897750053E-4 0.0 1.9014327484231517 2.6188053795500105E-4 60-61 9.82052017331254E-5 1.3094026897750053E-4 0.0 2.1483697281810956 2.6188053795500105E-4 62-63 9.82052017331254E-5 1.3094026897750053E-4 0.0 2.4111832155525614 2.946156051993762E-4 64-65 9.82052017331254E-5 1.6367533622187568E-4 0.0 2.7064862571640695 2.946156051993762E-4 66-67 9.82052017331254E-5 1.6367533622187568E-4 0.0 3.054623697307999 2.946156051993762E-4 68-69 9.82052017331254E-5 1.6367533622187568E-4 0.0 3.4260030351954347 2.946156051993762E-4 70-71 9.82052017331254E-5 1.8004286984406326E-4 0.0 3.803487463123947 2.946156051993762E-4 72-73 9.82052017331254E-5 1.964104034662508E-4 0.0 4.191103394364593 3.2735067244375136E-4 74-75 1.1457273535531296E-4 1.964104034662508E-4 0.0 4.6087864848691975 3.2735067244375136E-4 76-77 1.3094026897750053E-4 1.964104034662508E-4 0.0 5.097062747886296 3.2735067244375136E-4 78-79 1.3094026897750053E-4 1.964104034662508E-4 0.0 5.625472203345 3.6008573968812646E-4 80-81 1.3094026897750053E-4 1.964104034662508E-4 0.0 6.164520555658125 3.6008573968812646E-4 82-83 1.3094026897750053E-4 1.964104034662508E-4 0.0 6.713733146350629 3.6008573968812646E-4 84-85 1.3094026897750053E-4 1.964104034662508E-4 0.0 7.305288546523732 3.6008573968812646E-4 86-87 1.3094026897750053E-4 2.2914547071062593E-4 0.0 7.95882779652406 3.6008573968812646E-4 88-89 1.3094026897750053E-4 2.2914547071062593E-4 0.0 8.66169879286166 3.6008573968812646E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2505 0.0 46.219536 1 GTATCAA 4195 0.0 40.15502 1 TCAACGC 4955 0.0 33.04435 4 CAACGCA 5125 0.0 32.039272 5 TATCAAC 5180 0.0 31.973408 2 ATCAACG 5210 0.0 31.515522 3 AACGCAG 5475 0.0 30.24222 6 GTACATG 8760 0.0 26.433777 1 TACATGG 8995 0.0 25.69337 2 ACATGGG 9405 0.0 23.765572 3 ACGCAGA 6855 0.0 23.741535 7 CGCAGAG 7280 0.0 21.965546 8 CATGGGG 7770 0.0 21.500246 4 GAGTACA 6490 0.0 20.179382 1 ATGGGGG 5175 0.0 19.71644 5 AGTACAT 6760 0.0 18.3226 2 GTATAGG 700 0.0 18.30245 1 GCAGAGT 8220 0.0 18.241125 9 GTATAGC 955 0.0 17.88721 1 AGAGTAC 6820 0.0 16.97667 10-11 >>END_MODULE