##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921406_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2837944 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.48073006373628 31.0 31.0 34.0 27.0 34.0 2 30.52512664097671 31.0 31.0 34.0 26.0 34.0 3 30.578975836027773 33.0 31.0 34.0 26.0 34.0 4 34.049213444662755 37.0 35.0 37.0 30.0 37.0 5 34.04554247722999 37.0 35.0 37.0 30.0 37.0 6 34.08971530093617 37.0 35.0 37.0 30.0 37.0 7 34.01062494538299 37.0 35.0 37.0 30.0 37.0 8 33.97675042213659 37.0 35.0 37.0 30.0 37.0 9 35.54052898859174 39.0 37.0 39.0 30.0 39.0 10-11 35.429322072599035 39.0 36.0 39.0 30.0 39.0 12-13 35.31091275937791 39.0 35.0 39.0 29.0 39.0 14-15 36.44025674925228 40.0 37.0 41.0 29.0 41.0 16-17 36.390059493774366 40.0 37.0 41.0 29.0 41.0 18-19 36.33762258874735 40.0 37.0 41.0 28.0 41.0 20-21 36.273300142638476 40.0 37.0 41.0 28.0 41.0 22-23 36.15928837919283 40.0 36.0 41.0 27.0 41.0 24-25 36.06255778831436 40.0 36.0 41.0 27.0 41.0 26-27 35.915207629185076 40.0 36.0 41.0 27.0 41.0 28-29 35.770476091142044 40.0 36.0 41.0 27.0 41.0 30-31 35.62567584138377 40.0 36.0 41.0 26.5 41.0 32-33 35.44791158669798 39.0 35.0 41.0 25.0 41.0 34-35 35.29063593221008 39.0 35.0 41.0 25.0 41.0 36-37 35.12194461906225 39.0 35.0 41.0 25.0 41.0 38-39 35.36536732225865 39.0 35.0 41.0 25.0 41.0 40-41 35.49154810665749 40.0 35.0 41.0 25.0 41.0 42-43 35.33723938879696 40.0 35.0 41.0 24.5 41.0 44-45 35.22794336322352 40.0 35.0 41.0 24.0 41.0 46-47 35.08182684365865 40.0 35.0 41.0 23.5 41.0 48-49 34.94235457077377 39.0 35.0 41.0 23.0 41.0 50-51 33.223220049444244 37.0 32.5 39.5 19.0 40.0 52-53 33.38422833572474 37.5 33.5 39.5 20.5 40.0 54-55 34.25517469689325 39.0 34.0 40.5 21.5 41.0 56-57 34.27494887143651 39.0 34.0 41.0 21.0 41.0 58-59 34.10051907296268 38.0 34.0 41.0 20.0 41.0 60-61 33.850427985894015 38.0 34.0 40.0 19.5 41.0 62-63 33.55899076937388 37.0 34.0 40.0 18.0 41.0 64-65 33.27155680309407 37.0 33.5 40.0 17.5 41.0 66-67 32.935547177816055 36.0 33.0 39.5 13.5 41.0 68-69 32.564780876578254 36.0 33.0 39.0 12.0 41.0 70-71 32.18176415743228 35.0 33.0 39.0 8.0 40.5 72-73 31.82722509676019 35.0 32.0 37.5 7.0 40.0 74-75 31.42839270260442 35.0 32.0 37.0 2.0 39.0 76-77 31.05401146040937 35.0 32.0 36.5 2.0 39.0 78-79 30.710600702480388 35.0 31.5 36.0 2.0 38.5 80-81 30.367137089385835 35.0 31.0 36.0 2.0 37.0 82-83 30.067527583349076 35.0 31.0 35.0 2.0 37.0 84-85 29.836148105811812 35.0 31.0 35.0 2.0 36.5 86-87 29.61383646047984 35.0 31.0 35.0 2.0 36.0 88-89 29.41984443667669 35.0 31.0 35.0 2.0 36.0 90-91 29.17641063389552 34.5 31.0 35.0 2.0 35.5 92-93 28.985102771583932 34.0 30.0 35.0 2.0 35.0 94-95 28.77501494039347 34.0 30.0 35.0 2.0 35.0 96-97 28.52280982288586 34.0 30.0 35.0 2.0 35.0 98-99 28.30506662569804 34.0 30.0 35.0 2.0 35.0 100-101 27.257442007312335 33.5 27.5 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 91469.0 3 15738.0 4 11271.0 5 8603.0 6 7654.0 7 7904.0 8 8341.0 9 9051.0 10 9892.0 11 10385.0 12 10492.0 13 10429.0 14 11476.0 15 12051.0 16 12042.0 17 12725.0 18 12196.0 19 11414.0 20 11954.0 21 12304.0 22 13482.0 23 15577.0 24 18156.0 25 21374.0 26 25190.0 27 30128.0 28 35751.0 29 42356.0 30 51210.0 31 61436.0 32 77050.0 33 101172.0 34 143935.0 35 205961.0 36 335243.0 37 608763.0 38 641614.0 39 112148.0 40 7.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.09964153864811 17.404447910291594 12.376399931184444 25.11951061987585 2 16.340252037763005 19.439090286325136 39.06906164711258 25.15159602879928 3 19.971479890502522 23.488090474671218 28.762759576182006 27.777670058644254 4 13.73153829556496 15.045381277473089 35.96928090841528 35.25379951854667 5 14.51347025685499 37.4371963816091 33.63185763338058 14.41747572815534 6 34.15910359644078 34.11963184130099 17.149490814358696 14.571773747899538 7 29.71892857709244 31.679750205724332 20.21701934954106 18.38430186764216 8 27.563288562858233 34.32566388274175 19.61488157481547 18.49616597958455 9 27.907839811881736 15.515985964437414 18.66059483379644 37.915579389884414 10-11 26.459829864426904 24.881618270445177 27.2103077352246 21.44824412990332 12-13 26.791014448516957 22.18927476149708 27.180345110650485 23.83936567933548 14-15 23.979819625965444 23.753730765834373 24.48069801828981 27.78575158991038 16-17 24.19046340076307 26.842060462059607 25.257185899059305 23.710290238118024 18-19 24.168120971364516 26.43736497787571 26.486161944956528 22.908352105803246 20-21 24.575575823603366 25.582555599769773 26.583279201268013 23.25858937535885 22-23 24.478283224703482 25.288472673732702 26.257160589511358 23.97608351205246 24-25 24.234602106253174 25.434922121087084 26.233020362961966 24.097455409697773 26-27 23.985766353827465 25.744669564363786 26.208103717888864 24.06146036391988 28-29 23.961938112603214 26.267869043931036 25.845912724384018 23.924280119081732 30-31 24.65627279679444 25.702308665513097 25.829953093668173 23.81146544402429 32-33 24.266522838632557 25.735115842415972 25.81292676188167 24.185434557069797 34-35 24.53032354167845 25.942379165453083 25.92181653161756 23.605480761250906 36-37 24.41498872050894 25.946159370293604 26.031698153630828 23.607153755566628 38-39 24.409603234132614 25.977581036119872 25.89682991502191 23.715985814725602 40-41 24.48311002953657 25.678632818363837 25.94300661278057 23.895250539319015 42-43 24.177858721856968 25.691869693452553 25.777334209874365 24.352937374816115 44-45 23.999651874756825 25.807431661884944 26.10173165828365 24.09118480507458 46-47 24.16945401415112 25.622417370874285 25.799474108475458 24.408654506499143 48-49 23.980162529976525 25.803999412474187 26.017666025472636 24.198172032076652 50-51 24.161757584648676 25.775703808685 26.08176783797902 23.980770768687304 52-53 24.339102132245248 25.588072872309624 26.000906737397834 24.071918258047294 54-55 23.61537343874933 25.51306968977042 26.465422226867307 24.40613464461294 56-57 23.85505941345763 25.67643060190335 26.026890548581317 24.441619436057703 58-59 24.07460210825904 25.688556413717368 26.180477637817656 24.056363840205936 60-61 24.308006971442758 25.653493304791215 26.29065887761608 23.74784084614995 62-63 24.141454928557643 25.570884690959083 26.3340476362412 23.95361274424207 64-65 23.81429683761876 25.363635882106795 26.359403718724455 24.46266356154999 66-67 23.89927458066384 25.559423830969703 26.140906835960603 24.400394752405855 68-69 23.87645274602122 25.526665947550285 26.28489825591916 24.311983050509333 70-71 23.75539557170378 25.33160679745835 26.303312767175015 24.609684863662856 72-73 23.688311037229138 25.7712460839935 26.0771301689653 24.46331270981207 74-75 23.666421414081217 25.691820590908094 26.254883574455224 24.38687442055546 76-77 23.664284781234883 25.194828578388627 26.279192512594925 24.861694127781565 78-79 23.51432015567893 25.27458964507683 26.544928171886717 24.666162027357526 80-81 23.80654877998605 25.477568550570908 26.109317502409056 24.60656516703399 82-83 23.814886003349752 25.518333140565115 26.30378564409454 24.362995211990597 84-85 23.713585422921422 25.56079371298684 26.14244519637381 24.583175667717928 86-87 23.367950360578092 25.808985003801364 26.20289681029451 24.620167825326032 88-89 23.303469678568508 25.39526178571246 26.392168989280908 24.909099546438128 90-91 23.600474979179044 25.210505347047736 26.486835292281025 24.702184381492202 92-93 23.762580996095235 25.001474663167507 26.519212123673906 24.716732217063353 94-95 23.588676132660506 25.065996428615584 26.514473644702 24.830853794021905 96-97 23.39697338259591 24.845618773661453 26.664157379300747 25.09325046444189 98-99 23.08701963229818 24.80340415852282 26.614556648936972 25.49501956024203 100-101 23.326072185103996 24.89927386751434 26.70034242734304 25.074311520038634 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 62.0 1 50.5 2 94.0 3 144.5 4 129.0 5 140.5 6 235.0 7 437.0 8 664.0 9 725.5 10 609.5 11 510.0 12 522.0 13 610.0 14 714.5 15 797.0 16 847.0 17 928.0 18 1088.0 19 1205.0 20 1279.5 21 1405.5 22 1515.0 23 1607.5 24 1822.0 25 2117.0 26 2487.5 27 3082.0 28 3946.0 29 5477.0 30 8343.5 31 12872.5 32 19377.0 33 25662.5 34 31680.5 35 38882.5 36 47859.0 37 56675.5 38 63700.0 39 70452.5 40 76101.0 41 81105.5 42 86849.5 43 93413.5 44 99757.5 45 106511.5 46 112425.0 47 117629.0 48 123817.5 49 128769.0 50 130227.5 51 130718.0 52 129853.5 53 126890.0 54 123346.0 55 116792.0 56 107973.0 57 97789.0 58 87145.5 59 74195.0 60 60598.0 61 50015.5 62 40894.5 63 31463.5 64 22803.5 65 16835.0 66 12546.0 67 9660.5 68 7536.0 69 5757.5 70 4384.0 71 3205.0 72 2355.0 73 1861.5 74 1496.5 75 1165.5 76 874.5 77 606.0 78 402.5 79 304.0 80 227.0 81 164.5 82 120.0 83 97.5 84 87.0 85 68.0 86 59.0 87 43.5 88 43.5 89 42.0 90 35.0 91 30.5 92 23.5 93 20.5 94 20.0 95 19.0 96 14.5 97 8.5 98 7.5 99 7.5 100 4.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.04848580521673437 2 0.05718928914735456 3 0.047534412236464145 4 0.053982742436073435 5 0.04665349281028801 6 0.016631758766205394 7 0.014411841812241538 8 0.020543041018427424 9 0.020437330687286287 10-11 0.021793946603597535 12-13 0.027026607995083763 14-15 0.04325314382524814 16-17 0.029686984662135686 18-19 0.02387291644937321 20-21 0.026321872454142862 22-23 0.046635874421764485 24-25 0.04230175084497791 26-27 0.03042695698012364 28-29 0.01990877903158061 30-31 0.013178554615594952 32-33 0.010430086005925416 34-35 0.00960202174531985 36-37 0.0017618388523522664 38-39 0.0074878151224971315 40-41 0.0037350983669868047 42-43 0.22408828363068475 44-45 0.19838305477486518 46-47 0.20440854364990993 48-49 0.20183625892547563 50-51 0.20062059011735256 52-53 0.20479614819742745 54-55 0.20435568848433935 56-57 0.2147329193246942 58-59 0.2109449657921368 60-61 0.21513814226073522 62-63 0.21302393563791253 64-65 0.21349963212804762 66-67 0.20398570232534538 68-69 0.20312240128769277 70-71 0.1866492080181991 72-73 0.19374941859317873 74-75 0.19344990598827883 76-77 0.1921813820145852 78-79 0.21911989806705137 80-81 0.2269072257944484 82-83 0.2252158604961902 84-85 0.2207760265882625 86-87 0.2370201808069504 88-89 0.23564594650211562 90-91 0.23474740868741598 92-93 0.2392224793723907 94-95 0.25049824802744525 96-97 0.25113251001429204 98-99 0.24026196429527855 100-101 0.25104441807167444 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2837944.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.36936917144134 #Duplication Level Percentage of deduplicated Percentage of total 1 78.48631295048823 46.596828884628124 2 11.991949703983803 14.239089781223422 3 3.875205219089893 6.902054678017322 4 1.7454207974274116 4.1449812672791815 5 0.9702816791274586 2.8802505604202038 6 0.6146979984723797 2.1896539440151677 7 0.44038727245902587 1.830186018991682 8 0.3054229425493031 1.4506213943709996 9 0.23042774087130277 1.2312314653616636 >10 1.2564053727846536 13.196935136115817 >50 0.061613439881939784 2.4595475855991893 >100 0.020384489133680263 2.059012137664902 >500 9.538519878215912E-4 0.4135729803037981 >1k 5.365417431144106E-4 0.40603416600857023 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 7.047355409409065E-5 2 0.0 0.0 0.0 0.0 7.047355409409065E-5 3 0.0 0.0 0.0 0.0 7.047355409409065E-5 4 0.0 0.0 0.0 0.0 7.047355409409065E-5 5 0.0 0.0 0.0 0.0 7.047355409409065E-5 6 0.0 0.0 0.0 0.0 7.047355409409065E-5 7 0.0 0.0 0.0 0.0 7.047355409409065E-5 8 0.0 0.0 0.0 0.0 7.047355409409065E-5 9 0.0 0.0 0.0 0.0 7.047355409409065E-5 10-11 0.0 0.0 0.0 0.0 7.047355409409065E-5 12-13 0.0 0.0 0.0 0.0 1.0571033114113597E-4 14-15 0.0 0.0 0.0 0.0 1.7618388523522662E-4 16-17 0.0 0.0 0.0 1.7618388523522663E-5 2.818942163763626E-4 18-19 0.0 0.0 0.0 3.5236777047045326E-5 3.1713099342340793E-4 20-21 0.0 0.0 0.0 8.809194261761331E-5 3.1713099342340793E-4 22-23 0.0 0.0 0.0 2.466574393293173E-4 3.876045475174986E-4 24-25 0.0 0.0 0.0 4.404597130880666E-4 4.933148786586346E-4 26-27 0.0 3.5236777047045326E-5 0.0 0.001145195254028973 5.461700442292026E-4 28-29 0.0 3.5236777047045326E-5 0.0 0.0031889283227576016 5.637884327527252E-4 30-31 0.0 3.5236777047045326E-5 0.0 0.012931897176265635 5.637884327527252E-4 32-33 0.0 3.5236777047045326E-5 0.0 0.03469060700281612 5.637884327527252E-4 34-35 0.0 3.5236777047045326E-5 0.0 0.0650647088173692 5.990252097997705E-4 36-37 0.0 3.5236777047045326E-5 0.0 0.11089013736705164 5.990252097997705E-4 38-39 0.0 3.5236777047045326E-5 0.0 0.1876534561640399 5.990252097997705E-4 40-41 0.0 3.5236777047045326E-5 0.0 0.27430069092272436 5.990252097997705E-4 42-43 0.0 3.5236777047045326E-5 0.0 0.36441874822054277 5.990252097997705E-4 44-45 0.0 3.5236777047045326E-5 0.0 0.47608409468262936 6.342619868468159E-4 46-47 0.0 3.5236777047045326E-5 0.0 0.6038702666437392 6.342619868468159E-4 48-49 0.0 3.5236777047045326E-5 0.0 0.7333125671260603 6.342619868468159E-4 50-51 0.0 3.5236777047045326E-5 0.0 0.8785057069484106 6.342619868468159E-4 52-53 0.0 3.5236777047045326E-5 0.0 1.0287377058884883 7.223539294644292E-4 54-55 0.0 3.5236777047045326E-5 0.0 1.1993013251847113 8.104458720820425E-4 56-57 0.0 3.5236777047045326E-5 0.0 1.3980191293415234 8.104458720820425E-4 58-59 0.0 3.5236777047045326E-5 0.0 1.6140734278054816 8.280642606055651E-4 60-61 0.0 3.5236777047045326E-5 0.0 1.8405578122753656 9.161562032231785E-4 62-63 0.0 3.5236777047045326E-5 0.0 2.082440668314808 9.513929802702238E-4 64-65 0.0 3.5236777047045326E-5 0.0 2.344461342436637 9.866297573172692E-4 66-67 0.0 3.5236777047045326E-5 0.0 2.6470395469396153 0.0010218665343643145 68-69 0.0 3.5236777047045326E-5 0.0 2.976926253654054 0.0010218665343643145 70-71 0.0 5.285516557056799E-5 0.0 3.3289416563540364 0.001145195254028973 72-73 0.0 7.047355409409065E-5 0.0 3.6929728000270616 0.001303760750740677 74-75 0.0 7.047355409409065E-5 0.0 4.068755408845277 0.0013213791392641997 76-77 0.0 7.047355409409065E-5 0.0 4.4999478495699705 0.001356615916311245 78-79 0.0 7.047355409409065E-5 0.0 4.979855134562204 0.0013742343048347677 80-81 0.0 8.809194261761331E-5 0.0 5.466527880747471 0.0014270894704053357 82-83 0.0 1.0571033114113597E-4 0.0 5.974712679319959 0.0014799446359759036 84-85 0.0 1.0571033114113597E-4 0.0 6.515614825380627 0.0014799446359759036 86-87 1.7618388523522663E-5 1.0571033114113597E-4 0.0 7.092458484029283 0.0014799446359759036 88-89 3.5236777047045326E-5 1.0571033114113597E-4 0.0 7.7177879478946725 0.0014799446359759036 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2360 0.0 55.490158 1 GTATCAA 4565 0.0 41.1598 1 TCAACGC 5315 0.0 34.911537 4 CAACGCA 5365 0.0 34.406834 5 TATCAAC 5575 0.0 33.195908 2 ATCAACG 5765 0.0 32.267048 3 AACGCAG 5840 0.0 31.84031 6 GTACATG 10205 0.0 30.872654 1 TACATGG 10640 0.0 28.67703 2 ACATGGG 11030 0.0 27.018211 3 ACGCAGA 6850 0.0 26.596302 7 CGCAGAG 7115 0.0 25.207848 8 CATGGGG 9410 0.0 24.661226 4 GAGTACA 7425 0.0 23.516369 1 ATGGGGG 6340 0.0 22.45416 5 AGTACAT 7565 0.0 20.762703 2 GCAGAGT 8205 0.0 20.47049 9 GTAAGTA 1820 0.0 19.81559 2 TAAGTAC 2385 0.0 18.305092 3 TACACTG 4135 0.0 18.132029 5 >>END_MODULE