##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921406_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2837944 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.454007901494887 33.0 31.0 34.0 30.0 34.0 2 31.580783482690286 34.0 31.0 34.0 29.0 34.0 3 31.658424197235746 34.0 31.0 34.0 28.0 34.0 4 35.15411509177066 37.0 35.0 37.0 33.0 37.0 5 34.904883253510285 37.0 35.0 37.0 32.0 37.0 6 34.86610236142785 37.0 35.0 37.0 32.0 37.0 7 34.735487733373176 37.0 35.0 37.0 32.0 37.0 8 34.698284391799135 37.0 35.0 37.0 32.0 37.0 9 36.323049714864 39.0 37.0 39.0 32.0 39.0 10-11 36.17264223677422 39.0 37.0 39.0 32.0 39.0 12-13 36.10185384207722 39.0 37.0 39.0 32.0 39.0 14-15 37.33734650859918 40.0 38.0 41.0 32.0 41.0 16-17 37.31494684179815 40.0 38.0 41.0 32.0 41.0 18-19 37.27775283797003 40.0 38.0 41.0 31.0 41.0 20-21 37.23782446024305 40.0 38.0 41.0 31.0 41.0 22-23 37.13492338115199 40.0 38.0 41.0 31.0 41.0 24-25 37.06576997290996 40.0 37.0 41.0 31.0 41.0 26-27 36.92885976608418 40.0 37.0 41.0 30.5 41.0 28-29 36.774933719622375 40.0 37.0 41.0 30.0 41.0 30-31 36.638884523443735 40.0 37.0 41.0 30.0 41.0 32-33 36.59716611744277 40.0 37.0 41.0 30.0 41.0 34-35 36.733186771832 40.0 37.0 41.0 30.0 41.0 36-37 36.713615913492305 40.0 37.0 41.0 30.0 41.0 38-39 36.63057516286438 40.0 37.0 41.0 30.0 41.0 40-41 36.512589219519484 40.0 37.0 41.0 30.0 41.0 42-43 36.41182172727862 40.0 36.5 41.0 30.0 41.0 44-45 36.28807157576048 40.0 36.0 41.0 29.0 41.0 46-47 36.141121882602334 40.0 36.0 41.0 28.5 41.0 48-49 35.9879849637625 40.0 35.5 41.0 28.0 41.0 50-51 35.836863060018096 40.0 35.0 41.0 28.0 41.0 52-53 35.67252877435214 39.0 35.0 41.0 28.0 41.0 54-55 35.46551270920075 39.0 35.0 41.0 27.0 41.0 56-57 35.20539975418825 39.0 35.0 41.0 26.5 41.0 58-59 34.979884557271035 38.5 35.0 40.5 26.0 41.0 60-61 34.70288155791658 38.0 34.5 40.0 26.0 41.0 62-63 34.401096357081045 37.5 34.0 40.0 26.0 41.0 64-65 34.09035414370403 37.0 34.0 40.0 26.0 41.0 66-67 33.75743707416355 36.5 34.0 39.0 25.0 41.0 68-69 33.388752737897576 36.0 34.0 39.0 24.5 41.0 70-71 33.010211970356 35.5 33.5 39.0 23.5 40.0 72-73 32.6135565042862 35.0 33.0 37.5 22.5 40.0 74-75 32.20712512297635 35.0 33.0 37.0 21.5 39.0 76-77 29.44858337585238 33.0 29.0 34.5 16.5 36.5 78-79 31.114643206490335 34.5 31.5 36.0 19.5 37.0 80-81 31.314696484497226 35.0 32.0 36.0 20.0 37.0 82-83 31.151304430249503 35.0 32.0 35.0 20.0 37.0 84-85 30.92901057948994 35.0 32.0 35.0 18.5 36.5 86-87 30.692879246384003 35.0 32.0 35.0 17.5 36.0 88-89 30.42238148462408 35.0 32.0 35.0 11.0 36.0 90-91 30.237951488824304 35.0 32.0 35.0 7.0 35.0 92-93 30.094592599431138 34.0 31.5 35.0 4.5 35.0 94-95 30.001204921591125 34.0 31.0 35.0 2.0 35.0 96-97 29.818814078079058 34.0 31.0 35.0 2.0 35.0 98-99 29.5650738703794 34.0 31.0 35.0 2.0 35.0 100-101 28.470042220706258 33.5 29.0 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 48677.0 3 16823.0 4 9374.0 5 6697.0 6 5787.0 7 5917.0 8 6136.0 9 6558.0 10 7380.0 11 7750.0 12 8552.0 13 9227.0 14 9899.0 15 10636.0 16 11468.0 17 12501.0 18 11598.0 19 10426.0 20 10237.0 21 10033.0 22 10567.0 23 11865.0 24 14255.0 25 16950.0 26 20550.0 27 24838.0 28 29900.0 29 36206.0 30 44543.0 31 54996.0 32 70505.0 33 93919.0 34 138559.0 35 203168.0 36 349489.0 37 681190.0 38 719311.0 39 91456.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.893859665840125 18.93294991978102 13.024555548732414 26.148634865646443 2 15.371322941266428 20.688888466046073 37.65232031470781 26.287468277979688 3 18.511034846568606 24.56251940335114 28.700503174485153 28.225942575595102 4 13.338776470986222 16.176655070927584 35.05643760853386 35.42813084955233 5 14.227749733716527 37.71109705970883 33.7498704709781 14.311282735596548 6 34.10373705119197 34.77574662444775 16.81732939709772 14.303186927262566 7 29.46690834465612 31.826193402529164 20.35553303527634 18.35136521753838 8 27.498361464463162 34.87120758307199 19.325029070791782 18.305401881673067 9 27.5485351367046 15.472045960033038 18.648641410824172 38.33077749243819 10-11 26.276986560226945 25.207145279747323 27.200967650961328 21.314900509064408 12-13 26.62505186434138 22.35690947547202 27.30884191220193 23.709196747984667 14-15 23.78494151534175 24.025180813768998 24.446370430850283 27.743507240038966 16-17 24.079322409200767 27.10967509144847 25.257079350246325 23.55392314910444 18-19 24.044634606355157 26.685148431120194 26.52168436000504 22.748532602519617 20-21 24.467735359793313 25.691624255925376 26.631431953179813 23.209208431101498 22-23 24.285030942365715 25.434122492126765 26.33845882793402 23.9423877375735 24-25 24.081182550269116 25.613917753635125 26.238693005621585 24.066206690474175 26-27 23.825549531625807 25.878707055714916 26.35697430641558 23.93876910624369 28-29 23.86457861639653 26.44309634268175 25.889098171605173 23.80322686931655 30-31 24.515418280969907 25.849856098158803 25.892393175812227 23.742332445059063 32-33 24.13661918099328 25.894032558332135 25.835090294438196 24.13425796623639 34-35 24.358902522312604 26.093410919096684 26.022418676968208 23.525267881622504 36-37 24.297628439974194 26.04477009754676 26.126837216398908 23.530764246080142 38-39 24.361089249561875 26.044548933546942 25.937464047368238 23.65689776952295 40-41 24.452104164915745 25.78472638112389 25.945908231004534 23.817261222955832 42-43 24.093732363556146 25.847919254226092 25.768752930413807 24.289595451803955 44-45 23.918684907717584 25.882245563487636 26.101577966960587 24.09749156183419 46-47 24.037064459301018 25.800230542797546 25.810133099524922 24.35257189837651 48-49 23.883992249093293 26.01887473003187 25.98566008253091 24.111472938343923 50-51 24.068210698133676 25.8920044852183 26.061292580149313 23.97849223649871 52-53 24.262747739470107 25.708137273332554 25.978796537069588 24.050318450127744 54-55 23.501713316794202 25.639919285856365 26.42785649260646 24.43051090474297 56-57 23.76056891681718 25.765454136358695 25.98185847311429 24.492118473709834 58-59 23.948364561196207 25.817983703846494 26.090602356480957 24.14304937847634 60-61 24.191475217115745 25.837112930141494 26.16741395231973 23.803997900423035 62-63 24.020518640173115 25.723280303938083 26.209214709137175 24.046986346751627 64-65 23.68373744647867 25.519879955713048 26.24939503756319 24.546987560245093 66-67 23.8196380628181 25.7428644597653 25.963565171305664 24.473932306110935 68-69 23.70913021847678 25.682648515693383 26.113412801116887 24.494808464712943 70-71 23.637009384011222 25.494546556963275 26.08483681972969 24.78360723929581 72-73 23.6111953102861 25.937301299737626 25.820795097117287 24.630708292858987 74-75 23.553897056555893 25.85231232845329 25.936989765573028 24.656800849417788 76-77 23.45044949575231 25.38545364630248 26.095851216022893 25.06824564192232 78-79 23.334135541433167 25.465681801953334 26.27746350614306 24.92271915047044 80-81 23.652620193104344 25.676827690370235 25.819491227241347 24.85106088928407 82-83 23.624871602522116 25.721893838348436 25.976442003460587 24.676792555668865 84-85 23.50812905035977 25.75251148521695 25.87013505208729 24.86922441233599 86-87 23.14870521686692 26.02958446330772 25.818571665355954 25.00313865446941 88-89 23.13098162196997 25.62612707466534 25.974884254024964 25.268007049339726 90-91 23.27734759793851 25.42879278007259 26.09506433372049 25.19879528826841 92-93 23.418959024190062 25.29413485993427 26.065450030213782 25.221456085661885 94-95 23.220831245458655 25.376522210405618 26.044025436480332 25.3586211076554 96-97 22.91790337475281 25.213180722454247 26.15527256561667 25.71364333717627 98-99 22.60075823485407 25.210850813645408 26.147897024109668 26.040493927390855 100-101 22.69823480608132 25.356006643636753 26.112586280682198 25.833172269599725 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 68.0 1 54.0 2 75.5 3 111.0 4 93.0 5 90.0 6 165.5 7 364.0 8 563.0 9 635.5 10 513.5 11 383.5 12 386.0 13 400.0 14 439.0 15 473.0 16 549.5 17 626.5 18 685.5 19 768.0 20 851.5 21 971.0 22 1086.0 23 1254.5 24 1500.5 25 1860.5 26 2409.0 27 3148.5 28 4262.5 29 6182.5 30 9389.5 31 14164.5 32 21130.0 33 27292.0 34 32769.5 35 39488.5 36 48047.5 37 56915.0 38 63948.5 39 70144.5 40 75474.0 41 80488.5 42 86520.5 43 93553.5 44 99969.0 45 106679.5 46 112797.5 47 118258.5 48 124454.5 49 129114.0 50 130588.5 51 131402.5 52 130902.0 53 128103.5 54 124344.5 55 117875.0 56 108936.0 57 97869.5 58 86499.5 59 73801.0 60 59947.0 61 49013.5 62 40228.5 63 30945.0 64 22075.5 65 15945.5 66 11833.0 67 9079.0 68 7007.0 69 5320.0 70 3947.5 71 2906.0 72 2160.5 73 1654.0 74 1283.0 75 949.0 76 693.0 77 431.5 78 242.5 79 141.5 80 88.0 81 62.0 82 42.0 83 23.0 84 18.0 85 12.5 86 10.5 87 9.5 88 4.5 89 1.5 90 1.0 91 1.0 92 1.5 93 3.0 94 2.0 95 0.5 96 1.5 97 1.5 98 0.5 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.15680365785935169 2 3.5236777047045325E-4 3 0.005673121104574298 4 0.004228413245645439 5 0.02614568856890763 6 0.0013389975277877224 7 2.818942163763626E-4 8 0.0015504181900699943 9 0.0 10-11 0.10703171028040018 12-13 4.052229360410213E-4 14-15 0.00523266139148623 16-17 2.466574393293173E-4 18-19 4.052229360410213E-4 20-21 8.104458720820426E-4 22-23 2.2903905080579463E-4 24-25 0.0015327998015464716 26-27 0.0033651122079928287 28-29 0.007364486402832473 30-31 0.014781827971235513 32-33 0.014852301525329605 34-35 0.010923400884584052 36-37 8.104458720820426E-4 38-39 2.9951260489988527E-4 40-41 0.005479318830815548 42-43 0.008721102319143718 44-45 0.00852730004538497 46-47 0.01032437567478428 48-49 0.011998122584518933 50-51 0.006272146314374069 52-53 0.0020613514572521514 54-55 9.690113687937464E-4 56-57 0.007064973797932588 58-59 0.009883915961696214 60-61 0.008086840332296903 62-63 0.01846407117265175 64-65 0.03491964605362192 66-67 0.03772096982886202 68-69 0.02739659415407774 70-71 0.04242507956464257 72-73 0.026639003447566263 74-75 0.02489478298373752 76-77 0.246446018667035 78-79 0.07123114480060212 80-81 0.05461700442292026 82-83 0.01985592386601004 84-85 0.03268211071113454 86-87 0.08224263762780379 88-89 0.2680813997739208 90-91 0.3247949924311403 92-93 0.052502797800097534 94-95 0.004580781016115892 96-97 0.009496311414178716 98-99 0.001303760750740677 100-101 0.0014270894704053357 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2837944.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.55874513376167 #Duplication Level Percentage of deduplicated Percentage of total 1 77.89656331395133 45.61524997897605 2 12.204693465647159 14.293830681810368 3 3.998350637420344 7.024151877963343 4 1.8314066979643477 4.289795122494331 5 1.013188038785623 2.9665510067911556 6 0.6658945797883018 2.3396370590265896 7 0.4440631298703141 1.820264575176336 8 0.31866567217418784 1.4928529503781691 9 0.2526316853133226 1.3314415025677986 >10 1.2891024729210407 13.437909601935683 >50 0.06313322872160991 2.5113987888273845 >100 0.020679090065657244 2.0510514906540482 >500 0.0011456207466556028 0.4665662639017107 >1k 4.823666300759914E-4 0.3592990994970068 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 7.047355409409065E-5 2 0.0 0.0 0.0 0.0 7.047355409409065E-5 3 0.0 0.0 0.0 0.0 7.047355409409065E-5 4 0.0 0.0 0.0 0.0 7.047355409409065E-5 5 0.0 0.0 0.0 0.0 7.047355409409065E-5 6 0.0 0.0 0.0 0.0 1.0571033114113597E-4 7 0.0 0.0 0.0 0.0 1.0571033114113597E-4 8 0.0 0.0 0.0 0.0 1.409471081881813E-4 9 0.0 0.0 0.0 0.0 1.7618388523522662E-4 10-11 0.0 0.0 0.0 0.0 1.7618388523522662E-4 12-13 0.0 0.0 0.0 3.5236777047045326E-5 1.9380227375874928E-4 14-15 0.0 0.0 0.0 3.5236777047045326E-5 2.818942163763626E-4 16-17 0.0 0.0 0.0 5.285516557056799E-5 3.5236777047045325E-4 18-19 0.0 0.0 0.0 7.047355409409065E-5 3.5236777047045325E-4 20-21 0.0 0.0 0.0 1.2332871966465865E-4 3.5236777047045325E-4 22-23 0.0 0.0 0.0 2.9951260489988527E-4 4.404597130880666E-4 24-25 0.0 0.0 0.0 5.461700442292026E-4 5.285516557056799E-4 26-27 0.0 0.0 0.0 0.001250905585170109 5.285516557056799E-4 28-29 0.0 0.0 0.0 0.003294638653898738 5.285516557056799E-4 30-31 0.0 0.0 0.0 0.01323140978116552 5.461700442292026E-4 32-33 0.0 0.0 0.0 0.03581818386832157 5.637884327527252E-4 34-35 0.0 0.0 0.0 0.0668617844467685 5.637884327527252E-4 36-37 0.0 1.7618388523522663E-5 0.0 0.1131981462636331 5.637884327527252E-4 38-39 0.0 5.285516557056799E-5 0.0 0.19041954316223295 5.637884327527252E-4 40-41 0.0 7.047355409409065E-5 0.0 0.2779124605700465 5.637884327527252E-4 42-43 0.0 7.047355409409065E-5 0.0 0.3690876211792763 5.814068212762479E-4 44-45 0.0 7.047355409409065E-5 0.0 0.4817219790101567 6.342619868468159E-4 46-47 0.0 7.047355409409065E-5 0.0 0.6101424129581133 6.694987638938612E-4 48-49 0.0 7.047355409409065E-5 0.0 0.74011326509614 6.694987638938612E-4 50-51 0.0 7.047355409409065E-5 0.0 0.8864516001725193 6.871171524173838E-4 52-53 0.0 7.047355409409065E-5 0.0 1.036313612953603 7.752090950349971E-4 54-55 0.0 7.047355409409065E-5 0.0 1.2070710345235847 8.104458720820425E-4 56-57 0.0 7.047355409409065E-5 0.0 1.4053483789673087 8.104458720820425E-4 58-59 0.0 7.047355409409065E-5 0.0 1.6218959923099256 8.104458720820425E-4 60-61 0.0 7.047355409409065E-5 0.0 1.849472716868268 8.104458720820425E-4 62-63 0.0 7.047355409409065E-5 0.0 2.0921836371683162 8.104458720820425E-4 64-65 0.0 7.047355409409065E-5 0.0 2.3548914284425626 8.104458720820425E-4 66-67 0.0 7.047355409409065E-5 0.0 2.657346304225876 8.280642606055651E-4 68-69 0.0 7.047355409409065E-5 0.0 2.9869511167239384 8.456826491290878E-4 70-71 0.0 7.047355409409065E-5 0.0 3.3400588595123795 8.809194261761331E-4 72-73 0.0 7.047355409409065E-5 0.0 3.7061689730311804 9.513929802702238E-4 74-75 0.0 7.047355409409065E-5 0.0 4.085316694057388 9.513929802702238E-4 76-77 0.0 8.809194261761331E-5 0.0 4.520578982531015 9.513929802702238E-4 78-79 0.0 1.0571033114113597E-4 0.0 5.005718928914735 9.513929802702238E-4 80-81 0.0 1.0571033114113597E-4 0.0 5.499298083401223 9.513929802702238E-4 82-83 0.0 1.0571033114113597E-4 0.0 6.011975571047209 0.0010923400884584051 84-85 0.0 1.0571033114113597E-4 0.0 6.559713651855005 0.0010923400884584051 86-87 0.0 1.0571033114113597E-4 0.0 7.144168454345822 0.0010923400884584051 88-89 0.0 1.0571033114113597E-4 0.0 7.777355719492704 0.0010923400884584051 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2400 0.0 52.87256 1 GTATCAA 4555 0.0 40.17008 1 TCAACGC 5705 0.0 31.690802 4 CAACGCA 5860 0.0 31.07586 5 TATCAAC 5820 0.0 30.820005 2 ATCAACG 5875 0.0 30.773792 3 AACGCAG 6145 0.0 29.630922 6 GTACATG 9760 0.0 28.242847 1 TACATGG 10245 0.0 26.308752 2 ACATGGG 10530 0.0 24.560207 3 ACGCAGA 7620 0.0 23.39616 7 CATGGGG 8710 0.0 23.099981 4 CGCAGAG 8055 0.0 21.778559 8 TAAGGCG 765 0.0 20.510418 5 TATACCG 235 1.12160706E-7 20.232714 5 ATGGGGG 5880 0.0 19.8112 5 GTATAGC 800 0.0 19.010359 1 TATATAC 900 0.0 18.981209 3 GCAGAGT 9130 0.0 18.224918 9 GAGTACA 7465 0.0 17.889854 1 >>END_MODULE