##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921405_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2475324 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.519443515273153 31.0 31.0 34.0 27.0 34.0 2 30.576911951728338 33.0 31.0 34.0 27.0 34.0 3 30.619961265676736 33.0 31.0 34.0 26.0 34.0 4 34.09004437398902 37.0 35.0 37.0 30.0 37.0 5 34.085205411493604 37.0 35.0 37.0 30.0 37.0 6 34.13564446512861 37.0 35.0 37.0 30.0 37.0 7 34.058911479870915 37.0 35.0 37.0 30.0 37.0 8 34.0282524631119 37.0 35.0 37.0 30.0 37.0 9 35.602209650130646 39.0 37.0 39.0 30.0 39.0 10-11 35.49925848090997 39.0 37.0 39.0 30.0 39.0 12-13 35.39605986933428 39.0 36.0 39.0 30.0 39.0 14-15 36.5377572794511 40.0 37.0 41.0 29.5 41.0 16-17 36.49026066890637 40.0 37.0 41.0 29.0 41.0 18-19 36.45783259080427 40.0 37.0 41.0 29.0 41.0 20-21 36.39976726279065 40.0 37.0 41.0 29.0 41.0 22-23 36.28376770071311 40.0 37.0 41.0 28.0 41.0 24-25 36.19017975020644 40.0 36.5 41.0 27.0 41.0 26-27 36.042951548968944 40.0 36.0 41.0 27.0 41.0 28-29 35.89990825443457 40.0 36.0 41.0 27.0 41.0 30-31 35.749532586441205 40.0 36.0 41.0 27.0 41.0 32-33 35.55382689296432 39.5 35.5 41.0 26.0 41.0 34-35 35.38143168328671 39.0 35.0 41.0 25.0 41.0 36-37 35.20116093893163 39.0 35.0 41.0 25.0 41.0 38-39 35.40965283736594 39.5 35.0 41.0 25.0 41.0 40-41 35.51442094045063 40.0 35.0 41.0 25.0 41.0 42-43 35.33627113056715 40.0 35.0 41.0 24.0 41.0 44-45 35.1959957565151 40.0 35.0 41.0 24.0 41.0 46-47 35.01892519928704 40.0 35.0 41.0 23.0 41.0 48-49 34.85298086230328 39.5 35.0 41.0 22.5 41.0 50-51 33.13400912365412 37.0 32.5 39.5 18.5 40.0 52-53 33.286944254570315 37.5 33.5 39.5 18.5 40.0 54-55 34.14884920115508 39.0 34.0 40.5 19.5 41.0 56-57 34.162840702873645 39.0 34.0 41.0 19.0 41.0 58-59 33.98880368792126 38.5 34.0 41.0 18.0 41.0 60-61 33.75418329075305 38.0 34.0 40.5 16.0 41.0 62-63 33.469906363772985 37.5 34.0 40.0 13.5 41.0 64-65 33.18155340472601 37.0 33.5 40.0 12.0 41.0 66-67 32.8413688470681 36.5 33.0 39.5 8.0 41.0 68-69 32.4851011423151 36.0 33.0 39.0 7.0 41.0 70-71 32.104720836545035 35.0 32.5 39.0 2.0 41.0 72-73 31.748312746129393 35.0 32.0 38.0 2.0 40.0 74-75 31.35159074125246 35.0 32.0 37.0 2.0 39.5 76-77 30.97544018480005 35.0 32.0 37.0 2.0 39.0 78-79 30.62704639877446 35.0 31.5 36.0 2.0 39.0 80-81 30.2721108428634 35.0 31.0 36.0 2.0 37.5 82-83 29.966994825727866 35.0 31.0 35.0 2.0 37.0 84-85 29.72467967829666 35.0 31.0 35.0 2.0 36.5 86-87 29.496045770169886 35.0 31.0 35.0 2.0 36.0 88-89 29.283735987692925 35.0 31.0 35.0 2.0 36.0 90-91 29.021275598669106 35.0 30.0 35.0 2.0 36.0 92-93 28.82709677601801 34.0 30.0 35.0 2.0 35.0 94-95 28.619364374118298 34.0 30.0 35.0 2.0 35.0 96-97 28.367509667421317 34.0 30.0 35.0 2.0 35.0 98-99 28.13034778477484 34.0 29.5 35.0 2.0 35.0 100-101 27.077241403549596 33.0 27.0 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 78061.0 3 13276.0 4 9273.0 5 7016.0 6 6612.0 7 6776.0 8 7363.0 9 8092.0 10 8688.0 11 9448.0 12 9635.0 13 9977.0 14 10884.0 15 12132.0 16 12798.0 17 14175.0 18 12499.0 19 10739.0 20 10763.0 21 11062.0 22 12306.0 23 13862.0 24 15926.0 25 18574.0 26 22266.0 27 26699.0 28 31045.0 29 36594.0 30 43724.0 31 52998.0 32 65862.0 33 85318.0 34 116933.0 35 172707.0 36 287927.0 37 519353.0 38 570279.0 39 113658.0 40 24.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.78523606038412 18.397285721907757 13.095971427970904 24.721506789737223 2 16.42583510216225 19.68422614223365 38.92117537822487 24.968763377379226 3 19.561741329246132 23.141600217294297 29.55489429537797 27.7417641580816 4 13.768953380877717 15.879872217903804 35.926244361633195 34.42493003958529 5 14.60651177679821 36.49041147050526 34.28496480743316 14.618111945263374 6 33.66794942453682 34.63951325238113 16.992810952952794 14.699726370129252 7 28.9374150237075 31.686717536278437 20.83621722415155 18.539650215862512 8 26.381393897933613 34.45307319659237 19.982293525822882 19.18323937965113 9 26.372425263130673 15.890312653546768 19.887579521063383 37.849682562259176 10-11 25.567008726288392 25.243806125312577 27.820274543405866 21.368910604993165 12-13 26.129864252022276 22.987485970082304 27.40248260088155 23.48016717701387 14-15 23.362847739373258 24.752693743611466 24.903371206135095 26.98108731088018 16-17 23.312529032839464 27.646072436467207 25.98592441470099 23.055474115992343 18-19 23.287799654507065 26.737718332339956 27.473840527735405 22.50064148541757 20-21 23.747998207428342 25.984388947640014 27.50526638641234 22.762346458519303 22-23 23.67475362817923 25.880904051806997 27.119715161759437 23.324627158254334 24-25 23.41892556575707 26.10612262054254 27.193421362666925 23.281530451033465 26-27 23.206588385340044 26.349823492197427 27.230937995863062 23.212650126599467 28-29 23.31065866840742 26.46975691054003 27.18274713172459 23.03683728932796 30-31 23.64015134603547 26.070968757253816 27.02745727710874 23.261422619601973 32-33 23.300155954555006 26.156447468364657 26.92218029316224 23.621216283918095 34-35 23.70564946710878 26.29158294893545 26.86562430431626 23.13714327963951 36-37 23.711779808063284 26.14072262094013 26.882997784102503 23.26449978689409 38-39 23.396551988836304 26.29894318199264 27.06258893342911 23.24191589574194 40-41 23.654218261758896 26.11807686799299 27.057721795855638 23.169983074392476 42-43 23.563520890616036 26.101558764309118 26.764273489669982 23.57064685540486 44-45 23.55937517013501 26.214220038377402 26.795831310265743 23.43057348122185 46-47 23.722660830964198 26.337878105226427 26.480005958763897 23.45945510504548 48-49 23.44108973083603 26.433655828688114 26.564951870599216 23.560302569876637 50-51 23.504402898618775 26.478049463694 26.68534231858738 23.332205319099845 52-53 23.79495259072087 26.231825565913734 26.617305530468606 23.35591631289679 54-55 23.358583609679005 26.24134935490557 26.744438813181688 23.655628222233737 56-57 23.45009139435602 26.467744775947192 26.578592061342516 23.503571768354274 58-59 23.386608527418147 26.31372483135212 26.78922005706914 23.51044658416059 60-61 23.316198630303365 26.2638479763048 26.968554304471677 23.451399088920162 62-63 23.368133529762545 26.22137718255245 27.012518921291072 23.397970366393924 64-65 23.2444123716766 26.132459406638052 26.838085039841868 23.785043181843484 66-67 23.178828589500316 26.302218848829856 26.688364326375712 23.83058823529412 68-69 23.324940443541287 26.132523999684253 26.853698572466598 23.68883698430786 70-71 23.19000946867173 25.961867499710113 26.914218771849125 23.933904259769033 72-73 23.165576359672592 26.057149842262355 26.837317723364517 23.939956074700532 74-75 23.149824362358558 26.221929802015286 26.743489709558872 23.884756126067288 76-77 23.163645260919168 26.021691303180194 26.776723994347172 24.037939441553473 78-79 23.080067029886926 26.011248032849345 26.854202708321612 24.054482228942124 80-81 23.091255061531992 26.069048396556465 26.810060121920138 24.029636419991405 82-83 23.05406544570559 26.04140897067499 26.917754169057208 23.986771414562213 84-85 23.091534171641324 26.01320965668942 26.902909003089352 23.992347168579908 86-87 23.034717372778317 26.072236933936182 26.830022370938877 24.063023322346623 88-89 22.94675074720484 25.995480124411984 26.798241937658762 24.259527190724413 90-91 22.872504658187346 25.842021901325996 26.986165441726545 24.29930799876011 92-93 22.890195296325803 25.67026496763959 27.202568180598735 24.236971555435872 94-95 22.851461370155384 25.519521216115926 27.273691894754215 24.355325518974475 96-97 22.899324385073776 25.39705843044471 27.22577899024688 24.477838194234632 98-99 22.79192524575559 25.44487076951112 27.145934782388615 24.617269202344673 100-101 22.813646327449085 25.28276288012636 27.329185503181748 24.574405289242808 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 89.0 1 67.0 2 71.0 3 118.0 4 119.5 5 126.5 6 219.0 7 437.0 8 683.5 9 787.5 10 719.0 11 624.0 12 646.0 13 712.0 14 803.0 15 933.0 16 1045.0 17 1180.0 18 1317.5 19 1510.0 20 1697.0 21 1867.5 22 2152.5 23 2532.0 24 3039.0 25 3853.0 26 5137.5 27 7039.5 28 9631.0 29 12998.0 30 17275.5 31 22727.0 32 29692.0 33 34474.0 34 37749.5 35 43032.0 36 49569.5 37 56058.0 38 61292.5 39 66120.5 40 70508.0 41 74557.5 42 78799.0 43 83493.5 44 88358.5 45 93956.0 46 97860.0 47 100091.5 48 102843.5 49 104470.0 50 103919.5 51 101720.5 52 99964.0 53 97969.0 54 95194.0 55 91160.0 56 84197.5 57 75189.5 58 67401.0 59 59333.0 60 49377.0 61 40494.0 62 33133.5 63 25687.0 64 18675.5 65 13644.5 66 10209.5 67 7869.5 68 6118.0 69 4678.0 70 3632.5 71 2733.0 72 1967.0 73 1461.5 74 1137.0 75 904.0 76 709.5 77 470.0 78 298.0 79 215.5 80 153.5 81 113.5 82 85.0 83 73.0 84 58.0 85 42.5 86 40.5 87 39.5 88 37.5 89 31.5 90 24.5 91 24.5 92 21.5 93 16.5 94 13.0 95 12.5 96 12.5 97 7.0 98 5.0 99 6.0 100 4.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.05235678238485144 2 0.05918417144583901 3 0.050902427318605566 4 0.05756822137223249 5 0.049367274748679364 6 0.01809864082439309 7 0.014907139429020201 8 0.021128547212405327 9 0.020522565934802877 10-11 0.022643500406411443 12-13 0.028339724415874446 14-15 0.04706454589379006 16-17 0.030521257015243254 18-19 0.024198852352257726 20-21 0.026945967477388817 22-23 0.04920567974131871 24-25 0.043347860724495056 26-27 0.03181401707412848 28-29 0.021633531610407365 30-31 0.013472983738694409 32-33 0.009857295448999806 34-35 0.009736099193479317 36-37 0.0011715638033647313 38-39 0.0063830027907457775 40-41 0.003252099523133133 42-43 0.22150635633961455 44-45 0.19631773456727283 46-47 0.20251894297473785 48-49 0.200074818488408 50-51 0.1981962765278404 52-53 0.20308452550050013 54-55 0.20150897417873376 56-57 0.212457035927418 58-59 0.20855855637484225 60-61 0.21362859973078274 62-63 0.2110026808611721 64-65 0.21195205152941596 66-67 0.2024583448469776 68-69 0.20114538541217228 70-71 0.1835921277376214 72-73 0.19254045127021754 74-75 0.19207586562405568 76-77 0.1899751305283672 78-79 0.2173856836519179 80-81 0.22593001966611242 82-83 0.22304150890954072 84-85 0.21768867429071914 86-87 0.2353429288448704 88-89 0.23378757689902413 90-91 0.2321918262013377 92-93 0.2372012714295179 94-95 0.24851292194476357 96-97 0.24909870384644595 98-99 0.23831223710512242 100-101 0.24891690946316522 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2475324.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 64.3750913535487 #Duplication Level Percentage of deduplicated Percentage of total 1 81.10100495056204 52.208846025570374 2 10.949022719693883 14.096886756247477 3 3.2818253674851876 6.338034235147575 4 1.4677889600447918 3.7795619356245487 5 0.8201052044165572 2.63971737269183 6 0.53167995601355 2.0536167443533824 7 0.3531727429000854 1.5914869311443456 8 0.2656372113371957 1.3680335797387115 9 0.20586916013349568 1.1927561391424917 >10 0.9720786181884447 10.805869618975608 >50 0.03787308117736977 1.6424504543347496 >100 0.012495189471478723 1.4213538093439382 >500 0.001069402425769163 0.49753153504728004 >1k 3.77436150267466E-4 0.3638548626376578 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 4.039875184016315E-5 0.0 5 0.0 0.0 0.0 8.07975036803263E-5 0.0 6 0.0 0.0 0.0 8.07975036803263E-5 0.0 7 0.0 0.0 0.0 8.07975036803263E-5 0.0 8 0.0 0.0 0.0 8.07975036803263E-5 0.0 9 0.0 0.0 0.0 8.07975036803263E-5 4.039875184016315E-5 10-11 0.0 0.0 0.0 1.2119625552048943E-4 4.039875184016315E-5 12-13 0.0 0.0 0.0 1.615950073606526E-4 1.0099687960040787E-4 14-15 0.0 0.0 0.0 2.0199375920081574E-4 2.221931351208973E-4 16-17 0.0 0.0 0.0 2.0199375920081574E-4 3.231900147213052E-4 18-19 0.0 0.0 0.0 2.6259188696106043E-4 3.635887665614683E-4 20-21 0.0 0.0 0.0 2.8279126288114205E-4 3.837881424815499E-4 22-23 0.0 0.0 0.0 4.443862702417946E-4 4.2418689432171305E-4 24-25 0.0 0.0 0.0 7.271775331229366E-4 4.443862702417946E-4 26-27 0.0 0.0 0.0 0.0011513644274446498 4.443862702417946E-4 28-29 0.0 0.0 0.0 0.0037974826729753356 4.645856461618762E-4 30-31 0.0 0.0 0.0 0.01516973131598126 5.049843980020393E-4 32-33 0.0 0.0 0.0 0.042701480695052446 5.251837739221209E-4 34-35 0.0 0.0 0.0 0.07976733550840212 5.251837739221209E-4 36-37 0.0 0.0 0.0 0.12994258529388475 5.655825257622841E-4 38-39 0.0 0.0 0.0 0.1980750802723199 5.655825257622841E-4 40-41 0.0 0.0 0.0 0.2730753630635828 5.655825257622841E-4 42-43 0.0 0.0 0.0 0.36007407515137413 5.655825257622841E-4 44-45 0.0 0.0 0.0 0.48175511569394547 6.059812776024472E-4 46-47 0.0 0.0 0.0 0.6214943983090699 6.463800294426104E-4 48-49 0.0 0.0 0.0 0.7524671517748788 6.463800294426104E-4 50-51 0.0 0.0 0.0 0.8868737991471016 6.463800294426104E-4 52-53 0.0 0.0 0.0 1.0325920970345701 6.463800294426104E-4 54-55 0.0 0.0 0.0 1.219496922423085 6.463800294426104E-4 56-57 0.0 0.0 0.0 1.4498910041675352 6.463800294426104E-4 58-59 0.0 0.0 0.0 1.6744878650229222 6.665794053626919E-4 60-61 0.0 2.0199375920081574E-5 0.0 1.8872276922132212 7.473769090430182E-4 62-63 0.0 4.039875184016315E-5 0.0 2.118894334640637 8.483737886434261E-4 64-65 0.0 4.039875184016315E-5 0.0 2.395989373512316 8.483737886434261E-4 66-67 0.0 4.039875184016315E-5 0.0 2.7414996986253115 8.483737886434261E-4 68-69 0.0 4.039875184016315E-5 0.0 3.0988468580274744 8.483737886434261E-4 70-71 0.0 4.039875184016315E-5 0.0 3.4468417063786396 8.887725404835892E-4 72-73 0.0 4.039875184016315E-5 0.0 3.8056230214711286 0.0010099687960040786 74-75 0.0 4.039875184016315E-5 0.0 4.218417467773915 0.0010503675478442417 76-77 0.0 4.039875184016315E-5 0.0 4.713786962837997 0.0010503675478442417 78-79 0.0 4.039875184016315E-5 0.0 5.253655683054016 0.0010503675478442417 80-81 0.0 4.039875184016315E-5 0.0 5.772921039831553 0.0010503675478442417 82-83 0.0 4.039875184016315E-5 0.0 6.293115567901414 0.0010503675478442417 84-85 0.0 4.039875184016315E-5 0.0 6.855122804125844 0.0010503675478442417 86-87 0.0 4.039875184016315E-5 0.0 7.516329175493794 0.0010503675478442417 88-89 0.0 4.039875184016315E-5 0.0 8.24324411672977 0.0010705669237643233 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2435 0.0 57.68232 1 GTATCAA 4270 0.0 40.228203 1 TCAACGC 5080 0.0 33.537704 4 CAACGCA 5170 0.0 32.676517 5 ATCAACG 5245 0.0 32.391525 3 TATCAAC 5375 0.0 31.785326 2 AACGCAG 5525 0.0 30.654154 6 ACGCAGA 6600 0.0 25.08975 7 GTACATG 5715 0.0 24.244686 1 CGCAGAG 6800 0.0 24.00439 8 TACATGG 6075 0.0 22.10766 2 ACATGGG 6095 0.0 21.411783 3 GTGGTAT 1255 0.0 20.03928 1 GCAGAGT 7815 0.0 19.915262 9 GAGTACT 4090 0.0 19.490686 12-13 GTAGGAC 565 0.0 19.318493 3 GTATTAG 705 0.0 18.845985 1 CAGAGTA 7170 0.0 18.662558 10-11 CATGGGG 5080 0.0 18.12344 4 AGAGTAC 6560 0.0 17.323788 10-11 >>END_MODULE